From 15f16f17975d0b5ce4d9e736cd62005583a8a828 Mon Sep 17 00:00:00 2001 From: Adam English Date: Tue, 9 Jan 2024 14:46:32 -0500 Subject: [PATCH] test fix now that `--gt` consolidates genotypes as expected, the test answer changes --- imgs/coverage.svg | 4 +- .../collapse/inputintragt_collapsed.vcf | 488 +++++++++--------- 2 files changed, 246 insertions(+), 246 deletions(-) diff --git a/imgs/coverage.svg b/imgs/coverage.svg index 6a91c8d4..ea71b13a 100644 --- a/imgs/coverage.svg +++ b/imgs/coverage.svg @@ -17,7 +17,7 @@ coverage - 91% - 91% + 90% + 90% diff --git a/repo_utils/answer_key/collapse/inputintragt_collapsed.vcf b/repo_utils/answer_key/collapse/inputintragt_collapsed.vcf index 32fc12b6..ea9dfaaa 100644 --- a/repo_utils/answer_key/collapse/inputintragt_collapsed.vcf +++ b/repo_utils/answer_key/collapse/inputintragt_collapsed.vcf @@ -121,14 +121,14 @@ chr18 107791 Sniffles2.DEL.22FS11 TGTCACATATTTCTGCAGTGATCACCCAGGTGACTGACTCTTGTCT chr18 108437 Sniffles2.INS.8S11 T TACCACTTGCCAAGGCTCTGCCTACAGGGGCATTGCAATGTATCTCTGCACTGATCACCTAGGTCTTG 3 GT PRECISE;SVTYPE=INS;SVLEN=68;SUPPORT=15;COVERAGE=71,89,91,90,79;STRAND=+-;AF=0.165;STDEV_LEN=0;STDEV_POS=12.238;SUPPORT_LONG=0;AC=0 GT:GQ:DR:DV:SUPP 0/0:60:76:15:0 chr18 108502 pbsv.DEL.5 GATGTACCACTTGTCAAGGCTCTGCCTACAGGGGCATTGCGATGTATCTCTGCACTGATCACCTAGGTC G 2 PASS SVTYPE=DEL;SVLEN=-68;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:102,24:126:48,54,9,15:4 chr18 108515 Sniffles2.INS.9S11 T CCAAGGCTCTACCTACAGGGGCATTGCAATGTATCTCTGCACTGATCACCTAGGTCTTGTAGCTATTTTCTGGGATCTGCCTACAGGGTGCTTTGTGGCGGGTCCCAGCAAGGATTACCCAGGTGATGTACCTCTCT 3 PASS PRECISE;SVTYPE=INS;SVLEN=137;SUPPORT=59;COVERAGE=73,91,90,90,79;STRAND=+-;AF=0.656;STDEV_LEN=0;STDEV_POS=8.038;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:60:31:59:2 -chr18 108548 chr18-108549-INS-410;pbsv.INS.6 T TCTCTGCACTGACCACCTAGGTCATGTAACTCTTGTCTAGGCTCTGCCTACAGTGGCATTGTGACATATCTCTGCACTGATCACCCAGGTCATGTAACTCTTGTCTAGGATCTGCCTACAGGGTGCTTTGTGACATATCCCTGCAATGATCACCCAGGTGATGTACCACTTGTCAGGGCTCTGCCTACAGGGGCATTGCGATGTACCTCTGCACTGATCACCTAGGTCATGTAACTCTTGTCTAGGCTCTGCCTACAGTGGCATTGTGACATATCTCTGCACTGATCACCCAGGTCATGTAACTCTTGTCTAGGATCTGCCTACAGGGTGCTTTGTGACATATCCCTGCAATGATCACCCAGGTGATGTACCACTTGTCAGGGCTCTGCCTACAGGGGCATTGCGATGTAC 4 PASS ID=chr18-108549-INS-410;SVTYPE=INS;SVLEN=410;TIG_REGION=h1tg012943l:30676-31085;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,1,0:5 +chr18 108548 chr18-108549-INS-410;pbsv.INS.6 T TCTCTGCACTGACCACCTAGGTCATGTAACTCTTGTCTAGGCTCTGCCTACAGTGGCATTGTGACATATCTCTGCACTGATCACCCAGGTCATGTAACTCTTGTCTAGGATCTGCCTACAGGGTGCTTTGTGACATATCCCTGCAATGATCACCCAGGTGATGTACCACTTGTCAGGGCTCTGCCTACAGGGGCATTGCGATGTACCTCTGCACTGATCACCTAGGTCATGTAACTCTTGTCTAGGCTCTGCCTACAGTGGCATTGTGACATATCTCTGCACTGATCACCCAGGTCATGTAACTCTTGTCTAGGATCTGCCTACAGGGTGCTTTGTGACATATCCCTGCAATGATCACCCAGGTGATGTACCACTTGTCAGGGCTCTGCCTACAGGGGCATTGCGATGTAC 4 PASS ID=chr18-108549-INS-410;SVTYPE=INS;SVLEN=410;TIG_REGION=h1tg012943l:30676-31085;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/0:2,1:3:1,1,1,0:5 chr18 109506 Sniffles2.INS.BS11 C GATCTCCCAGGGGCTGTAACTTTAGTCTAGGCTCTGGCTACACGACATTGTGACATATCA 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=67;SUPPORT=10;COVERAGE=79,52,20,19,17;STRAND=+-;AF=0.5;STDEV_LEN=0.753;STDEV_POS=45.641;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:60:10:10:2 -chr18 109537 chr18-109538-INS-340;pbsv.INS.7 G GTCTATATCTGCCTACTGGCAGCATTGTGGCATATTTCTGCACTGATCACCCAGGTGATGGACTCTTGTCTTGGATCTGCCTATGGGGGCATAGTGACATATCTCTGCACTGATCACTCATGTGATGTAACGCTTGTCTAAGCTGTGCCTAAAGGGGAATTGTGACAGATATCTCCACTGATCACCCAGGTGATGTAACTCTTGTCTAGGCTCTGCCTACAGGGGCTTTGTGACATATTTCTGTACTGATCACCCAGGTGATGTAACTCTTGTCTAGGCCCCACCTACAGGGGGTATTGTGACGTATCTCTGCAATGATCACCCAGGTGATGTAACACTCA 4 PASS ID=chr18-109538-INS-340;SVTYPE=INS;SVLEN=340;TIG_REGION=h1tg012943l:29348-29687;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,1,0:5 +chr18 109537 chr18-109538-INS-340;pbsv.INS.7 G GTCTATATCTGCCTACTGGCAGCATTGTGGCATATTTCTGCACTGATCACCCAGGTGATGGACTCTTGTCTTGGATCTGCCTATGGGGGCATAGTGACATATCTCTGCACTGATCACTCATGTGATGTAACGCTTGTCTAAGCTGTGCCTAAAGGGGAATTGTGACAGATATCTCCACTGATCACCCAGGTGATGTAACTCTTGTCTAGGCTCTGCCTACAGGGGCTTTGTGACATATTTCTGTACTGATCACCCAGGTGATGTAACTCTTGTCTAGGCCCCACCTACAGGGGGTATTGTGACGTATCTCTGCAATGATCACCCAGGTGATGTAACACTCA 4 PASS ID=chr18-109538-INS-340;SVTYPE=INS;SVLEN=340;TIG_REGION=h1tg012943l:29348-29687;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/0:2,1:3:1,1,1,0:5 chr18 110716 Sniffles2.DEL.23DS11 AGGGGCTTTGTGACACATCTCTGCACTGATCACCCTGGGGAGGGAACTCTTGTCTACGCTCTGCCTAC A 0 GT PRECISE;SVTYPE=DEL;SVLEN=-67;SUPPORT=3;COVERAGE=16,14,14,14,11;STRAND=+-;AF=0.214;STDEV_LEN=0.577;STDEV_POS=6.429;AC=0 GT:GQ:DR:DV:SUPP 0/0:0:11:3:0 chr18 110796 Sniffles2.DEL.23FS11 ACACATCTCTGCACTGATCACCCTGGGGAGGGAACTCTTGTCTACGCTCTGCCTACAGGAGGCTTTATGACTAATACTTACACTGATAACCTAGGTGATGTAACACTTGTCTAGGCTCTGCCTACACGGGAATTCTCA A 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-137;SUPPORT=8;COVERAGE=16,14,14,13,10;STRAND=+-;AF=0.571;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:37:6:8:2 chr18 110873 Sniffles2.DEL.23ES11 TTACACTGATAACCTAGGTGATGTAACACTTGTCTAGGCTCTGCCTACACGGGAATTCTCACATATCTC T 0 GT PRECISE;SVTYPE=DEL;SVLEN=-68;SUPPORT=3;COVERAGE=17,14,13,13,10;STRAND=+-;AF=0.231;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:2:10:3:2 chr18 112106 pbsv.INS.8 G GGCTGGGGGTGGGGAGGGGGCGGTCAGGCGGCGGGGTGGGC 2 PASS SVTYPE=INS;SVLEN=40;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,1,0:4 -chr18 113197 chr18-113198-INS-64 A ATATATAATATATATATATATATTATATATATATTATATATATATATATTATATATATATATTAT 4 . ID=chr18-113198-INS-64;SVTYPE=INS;SVLEN=64;TIG_REGION=h1tg012943l:25583-25646;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=15.0 GT:AD:DP:SAC:SUPP 0/1:2,2:4:2,0,1,1:5 +chr18 113197 chr18-113198-INS-64 A ATATATAATATATATATATATATTATATATATATTATATATATATATATTATATATATATATTAT 4 . ID=chr18-113198-INS-64;SVTYPE=INS;SVLEN=64;TIG_REGION=h1tg012943l:25583-25646;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=15.0 GT:AD:DP:SAC:SUPP 1/0:2,2:4:2,0,1,1:5 chr18 113198 Sniffles2.INS.11S11 A TATATATAATATATATATATATATATTATATATATATTATATATATATATATTATATATATATATTAT 3 PASS PRECISE;SVTYPE=INS;SVLEN=68;SUPPORT=2;COVERAGE=5,5,5,5,5;STRAND=+-;AF=0.4;STDEV_LEN=2.828;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:11:3:2:2 chr18 146832 pbsv.DEL.10 TTTATTTATTTATTTATTTATTTATTTTTATTTATTTA T 2 PASS SVTYPE=DEL;SVLEN=-37;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,2,5:4 chr18 180924 Sniffles2.INS.13S11 T TCACGTTACAGCACACGTAACACCTCATTCCTATTTTATGGCTGAATAGTATTTCATGGTTCATTCACGTTACAGCACACGTAACACCTCATTCCTATTTTATGGCTGAATAGTATTTCATGGTTCACTCACGTTACAGCACACGTAACACCTCATTCCTGTTTTATGGCTGAATAGTATTTCATGGTTCATTCATGTTACAGCACACGTAACACCTCATTCCTATTTTATGGCTGAATAGTATTTCATGGTTCAT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=257;SUPPORT=3;COVERAGE=4,4,4,4,4;STRAND=+-;AF=0.75;STDEV_LEN=0.577;STDEV_POS=54.848;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=16.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:2,4:6:1,1,3,1:6 @@ -136,16 +136,16 @@ chr18 208205 pbsv.INS.12 G GTTTTTTTTTTTTTTTTTTTTAT 2 PASS SVTYPE=INS;SVLEN=22;AC chr18 210247 chr18-210248-INS-71 C CTATGATTGGACAGTAGTATCTTATTGGATTCTGATAATACTTTCGTAATGTGAACTTTAGAGTTATTCTTG 4 . ID=chr18-210248-INS-71;SVTYPE=INS;SVLEN=71;TIG_REGION=h1tg012238l:10415-10485;QUERY_STRAND=+;HOM_REF=0,72;HOM_TIG=0,72;AC=1 GT:SUPP 1/0:1 chr18 219172 chr18-219173-INS-191;pbsv.INS.13 C CAAAATAACCAGTGAGGATGGCATATACTCTTAATAATAAATACTCATAAAGTGGTGGCAGGACAAGATTGTGGGCATGTGTTCCCTGAGCGGTACAAAATAACCAGTGAGGATGGCATATACTCTTAATAATAAATACTCATAAAGTGGTGGCAGGACAAGATTGTGGGCATGTGTTCCCTGAGCGGTACA 4 PASS ID=chr18-219173-INS-191;SVTYPE=INS;SVLEN=191;TIG_REGION=h1tg012238l:19410-19600,h2tg015167l:16600-16790;QUERY_STRAND=+,+;HOM_REF=0,194;HOM_TIG=0,194;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=18.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:7:19:7 chr18 312220 pbsv.INS.14 A ATATATATATATATATATATATATATATA 2 PASS SVTYPE=INS;SVLEN=28;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:3,0,1,1:4 -chr18 312609 chr18-312610-INS-96 T TGGGGAGCTGTGAAGAATGGAGCCAGTAATTAAATTCACTGAAGTCTCCACAGGAGGGCAAGGTGGACAATCTGTCCCATAGGAGGGGGATTCATGA 4 . ID=chr18-312610-INS-96;SVTYPE=INS;SVLEN=96;TIG_REGION=h1tg012238l:113071-113166,h2tg015167l:110262-110357;QUERY_STRAND=+,+;HOM_REF=0,34;HOM_TIG=0,99;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=19.0 GT:DR:DV:GQ:SUPP 0/1:3:2:11:3 +chr18 312609 chr18-312610-INS-96 T TGGGGAGCTGTGAAGAATGGAGCCAGTAATTAAATTCACTGAAGTCTCCACAGGAGGGCAAGGTGGACAATCTGTCCCATAGGAGGGGGATTCATGA 4 . ID=chr18-312610-INS-96;SVTYPE=INS;SVLEN=96;TIG_REGION=h1tg012238l:113071-113166,h2tg015167l:110262-110357;QUERY_STRAND=+,+;HOM_REF=0,34;HOM_TIG=0,99;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=19.0 GT:DR:DV:GQ:SUPP 1/1:3:2:11:3 chr18 312610 pbsv.INS.DUP.15 G GGGGAGCTGTGAAGAATGGAGCCAGTAATTAAATCCACTGAAGTCTCCACAGGAGGGCAAGGTGGAAAATCTGTCCCATAGGAGGCGGATTC 0 PASS SVTYPE=INS;SVLEN=91;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:3,0,1,1:4 chr18 512228 chr18-512229-DEL-118;pbsv.DEL.16 GCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGAGACGCTCCTCACTTCCCAGACGGGGCGGTTGCCAGGCAGAGGGTTTCCTCACTTCTCAGACGGGT G 4 PASS ID=chr18-512229-DEL-118;SVTYPE=DEL;SVLEN=-118;TIG_REGION=h1tg002289l:72664-72664,h2tg002129l:72664-72664;QUERY_STRAND=-,-;HOM_REF=0,135;HOM_TIG=0,135;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=20.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 chr18 513023 chr18-513024-INS-216 G GGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGA 4 . ID=chr18-513024-INS-216;SVTYPE=INS;SVLEN=216;TIG_REGION=h1tg002289l:71770-71985,h2tg002129l:71770-71985;QUERY_STRAND=-,-;HOM_REF=0,3;HOM_TIG=0,88;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=21.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,6:7:.:6:16:1,0,0,6:7 chr18 514619 pbsv.INS.18 G GGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCCTCCTCGGACCTCGGCCAGACCTCCGGG 2 PASS SVTYPE=INS;SVLEN=714;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:0,5,0,1:4 -chr18 514620 chr18-514621-DEL-523;pbsv.DEL.19 ACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGG A 4 PASS ID=chr18-514621-DEL-523;SVTYPE=DEL;SVLEN=-523;TIG_REGION=h1tg002289l:70173-70173,h2tg002129l:70173-70173;QUERY_STRAND=-,-;HOM_REF=0,30;HOM_TIG=0,30;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=22.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:1:4:1:7 +chr18 514620 chr18-514621-DEL-523;pbsv.DEL.19 ACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGGCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGACCCCTCCTCGGACCTCGGCCAGACCTCCGGG A 4 PASS ID=chr18-514621-DEL-523;SVTYPE=DEL;SVLEN=-523;TIG_REGION=h1tg002289l:70173-70173,h2tg002129l:70173-70173;QUERY_STRAND=-,-;HOM_REF=0,30;HOM_TIG=0,30;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=22.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:4:1:7 chr18 588956 pbsv.INS.20 C CCTTCCTTTCTTTCTTCTTTCTTTCTTTCTTTCTTTCTTT 2 PASS SVTYPE=INS;SVLEN=39;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,2:2:0,0,1,1:4 chr18 588957 Sniffles2.INS.18S11 C CTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT 3 PASS PRECISE;SVTYPE=INS;SVLEN=51;SUPPORT=2;COVERAGE=2,2,2,2,2;STRAND=+-;AF=1;STDEV_LEN=4.243;STDEV_POS=0;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:5:0:2:2 chr18 591972 pbsv.DEL.21 GCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT G 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,1:2:0,1,1,0:4 -chr18 596803 chr18-596804-DEL-51 TCCCGCCCACCCGGCGTCTGCAGGCCCCGCCCACCCGGCGTCACCTGCAGGC T 4 . ID=chr18-596804-DEL-51;SVTYPE=DEL;SVLEN=-51;TIG_REGION=h1tg016748l:250799-250799;QUERY_STRAND=-;HOM_REF=0,137;HOM_TIG=0,86;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=24.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,4:4:.:4:11:0,0,1,3:7 +chr18 596803 chr18-596804-DEL-51 TCCCGCCCACCCGGCGTCTGCAGGCCCCGCCCACCCGGCGTCACCTGCAGGC T 4 . ID=chr18-596804-DEL-51;SVTYPE=DEL;SVLEN=-51;TIG_REGION=h1tg016748l:250799-250799;QUERY_STRAND=-;HOM_REF=0,137;HOM_TIG=0,86;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=24.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,4:4:.:4:11:0,0,1,3:7 chr18 627027 pbsv.INS.23 G GAGAGAGAAAGAAAGAGAAAAGAAGAAAGAGAAAGAAAGAAAAGA 2 PASS SVTYPE=INS;SVLEN=44;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:2,1,0,2:4 chr18 627030 chr18-627031-INS-50 A AGAGAGAGAAAGAAAGAGAAAAGAAGAAAGAGAAAGAAAGAAAAGAAAAAG 4 . ID=chr18-627031-INS-50;SVTYPE=INS;SVLEN=50;TIG_REGION=h1tg016748l:220581-220630;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 chr18 633791 pbsv.DEL.24 ATGTAATCGGAATGAATCAGGGCGGAGCG A 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,2,2:4 @@ -153,7 +153,7 @@ chr18 636344 chr18-636345-DEL-89 TGACTTTTTAACATATTACTTTTATTTAATCACCTTGCTCAAGGAGC chr18 657645 pbsv.DEL.25 ACCGCGCCACTTGGCCTGCCTCCGTCCCG A 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,5:10:2,3,2,3:4 chr18 666975 Sniffles2.DEL.244S11 AGATGGAGATGGTGATGGTGATGGAGATGGTGATGGTGATGGAGATGGAGATGGTGATGGAGATGGTGATGGTGATGGAGATGGAGATGGTG A 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-91;SUPPORT=2;COVERAGE=7,7,7,7,6;STRAND=+;AF=0.286;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:6:5:2:2 chr18 666993 chr18-666994-DEL-60 TGATGGAGATGGTGATGGTGATGGAGATGGAGATGGTGATGGAGATGGTGATGGTGATGGA T 4 . ID=chr18-666994-DEL-60;SVTYPE=DEL;SVLEN=-60;TIG_REGION=h1tg016748l:180726-180726;QUERY_STRAND=-;HOM_REF=0,29;HOM_TIG=0,17;AC=1 GT:SUPP 1/0:1 -chr18 667256 chr18-667257-DEL-122 GTGATGGAGATGGTGATGGTGATGGGATGGTGATGGAGATGGTGATGGTGATGGTGATGGAGATGGTGATGGTGATGGAGATGGTGATGGAGATGGTGATGGTGATGGAGATGGTGATGGTGA G 4 . ID=chr18-667257-DEL-122;SVTYPE=DEL;SVLEN=-122;TIG_REGION=h2tg007825l:33115-33115;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=27.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,7:7:2:5:6:0,0,3,4:7 +chr18 667256 chr18-667257-DEL-122 GTGATGGAGATGGTGATGGTGATGGGATGGTGATGGAGATGGTGATGGTGATGGTGATGGAGATGGTGATGGTGATGGAGATGGTGATGGAGATGGTGATGGTGATGGAGATGGTGATGGTGA G 4 . ID=chr18-667257-DEL-122;SVTYPE=DEL;SVLEN=-122;TIG_REGION=h2tg007825l:33115-33115;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=27.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,7:7:2:5:6:0,0,3,4:7 chr18 690703 pbsv.INS.DUP.27 A AGCTGTTTCCCCTGGAGAGTC 0 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 chr18 712349 chr18-712350-INS-108 G GCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGT 4 . ID=chr18-712350-INS-108;SVTYPE=INS;SVLEN=108;TIG_REGION=h1tg016748l:135359-135466,h2tg007825l:78110-78217;QUERY_STRAND=-,+;HOM_REF=0,6;HOM_TIG=0,168;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=28.0 GT:AD:DP:SAC:SUPP 1/1:1,5:6:0,1,2,3:5 chr18 712350 Sniffles2.INS.1AS11 C CCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTCCGCGCTTACCATGGCGTC 3 PASS PRECISE;SVTYPE=INS;SVLEN=73;SUPPORT=5;COVERAGE=5,5,5,5,5;STRAND=+-;AF=1;STDEV_LEN=20.207;STDEV_POS=0;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:13:0:5:2 @@ -161,7 +161,7 @@ chr18 736190 pbsv.DEL.29 ACAAACATTACAGATAGGAAG A 2 PASS SVTYPE=DEL;SVLEN=-20;AC= chr18 827417 pbsv.INS.30 T TTCTCTTTCTTTCTTTCTTTC 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 828471 pbsv.INS.31 T TTATATATATATATATATACGTA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,4,3:4 chr18 837102 chr18-837103-DEL-316;pbsv.DEL.32 TGTGCCACATTTTCTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCA T 4 PASS ID=chr18-837103-DEL-316;SVTYPE=DEL;SVLEN=-316;TIG_REGION=h1tg016748l:10624-10624,h2tg007825l:202945-202945;QUERY_STRAND=-,+;HOM_REF=0,15;HOM_TIG=0,15;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=29.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 -chr18 854878 chr18-854879-INS-318;pbsv.INS.33 T TTCCTCTGCTGTGTTGGTACCCAGATTGTAACTGATATTCACCATTTCCCTCATCCTCCATTCTAAATTCCCCTCGTGCTTGGCTAATCTTTCTGCTAGTCTCCATTGCTTGTCCAATGGGAAACCCAGACCTTTTCCTGTGAGGGACCTGAGCTCTTAACTCCTGTGTTCTTGCCAGGTGTGGTTGCTGTGTAGGGAAACAAGGGATGGCCTAGTGAATCCCTGAGTTCCAGATGTACTCTCCTCTGCCTTGATTAGGTAGAGCAATCTTATTTCCTCAGGATAGCCAGGGGCAACTGCTGCTATTAGTATATAACTC 4 PASS ID=chr18-854879-INS-318;SVTYPE=INS;SVLEN=318;TIG_REGION=h1tg003533l:48832-49149;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=30.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 +chr18 854878 chr18-854879-INS-318;pbsv.INS.33 T TTCCTCTGCTGTGTTGGTACCCAGATTGTAACTGATATTCACCATTTCCCTCATCCTCCATTCTAAATTCCCCTCGTGCTTGGCTAATCTTTCTGCTAGTCTCCATTGCTTGTCCAATGGGAAACCCAGACCTTTTCCTGTGAGGGACCTGAGCTCTTAACTCCTGTGTTCTTGCCAGGTGTGGTTGCTGTGTAGGGAAACAAGGGATGGCCTAGTGAATCCCTGAGTTCCAGATGTACTCTCCTCTGCCTTGATTAGGTAGAGCAATCTTATTTCCTCAGGATAGCCAGGGGCAACTGCTGCTATTAGTATATAACTC 4 PASS ID=chr18-854879-INS-318;SVTYPE=INS;SVLEN=318;TIG_REGION=h1tg003533l:48832-49149;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=30.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:5:13:7 chr18 898965 chr18-898966-INS-81 G GCCAAGCCTGAGCCCAAAGGGCAATAAAAACAAAGGCTTCAAAATTATTACATGTAAACCTATATTCACAGGTAGATAATGC 4 . ID=chr18-898966-INS-81;SVTYPE=INS;SVLEN=81;TIG_REGION=h1tg003533l:4660-4740;QUERY_STRAND=-;HOM_REF=0,22;HOM_TIG=0,22;AC=1 GT:SUPP 1/0:1 chr18 988624 pbsv.DEL.34 TATATATATATATATATATATATAT T 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 chr18 1083669 pbsv.DEL.35 CATGTATATATATATGTACACATGTATAT C 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:2,4,0,1:4 @@ -177,16 +177,16 @@ chr18 1629493 Sniffles2.INS.1DS11 T TGAATATATATGTGAATATGTGAATATATGTGAATATATATGTG chr18 1629687 pbsv.INS.44 T TATATGTGTGAATGTGAATATATATGTGAAT 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 chr18 1648125 pbsv.DEL.45 CTTTTTTTTTTTTTTTTTTTTTTTTTTTT C 2 PASS SVTYPE=DEL;SVLEN=-28;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 chr18 1675423 pbsv.DEL.46 TAATATATATATATATATATATATATATATA T 2 PASS SVTYPE=DEL;SVLEN=-30;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,4,7:4 -chr18 1720276 chr18-1720277-DEL-56;pbsv.DEL.47 AATATATAATATATTGTATTATATATTGTATATATAATATATTGTATTATATATTGT A 4 PASS ID=chr18-1720277-DEL-56;SVTYPE=DEL;SVLEN=-56;TIG_REGION=h2tg001370l:684908-684908;QUERY_STRAND=+;HOM_REF=0,98;HOM_TIG=0,98;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=35.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 +chr18 1720276 chr18-1720277-DEL-56;pbsv.DEL.47 AATATATAATATATTGTATTATATATTGTATATATAATATATTGTATTATATATTGT A 4 PASS ID=chr18-1720277-DEL-56;SVTYPE=DEL;SVLEN=-56;TIG_REGION=h2tg001370l:684908-684908;QUERY_STRAND=+;HOM_REF=0,98;HOM_TIG=0,98;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=35.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:5:13:7 chr18 1748614 pbsv.INS.DUP.48 T TCTAAGGTACAACTATATTA 0 PASS SVTYPE=INS;SVLEN=19;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,1,2:4 chr18 1803865 chr18-1803866-INS-139;pbsv.INS.49 G GCCTGCAGTTTATATTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTC 4 PASS ID=chr18-1803866-INS-139;SVTYPE=INS;SVLEN=139;TIG_REGION=h2tg001370l:768509-768647;QUERY_STRAND=+;HOM_REF=0,18;HOM_TIG=0,18;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=36.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:3:21:7 chr18 1854728 pbsv.DEL.50 ACACATACATATACACATATACATATACACATATATATATAAAGGGGAGTATATATATACACATATATATATAAAGGGGAGTTTATACACACACATACATATACACATATACATATACACATATATATATAAAGGGGAG A 2 PASS SVTYPE=DEL;SVLEN=-138;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,6,1:4 chr18 1854755 chr18-1854756-DEL-122 CACATATATATATAAAGGGGAGTATATATATACACATATATATATAAAGGGGAGTTTATACACACACATACATATACACATATACATATACACATATATATATAAAGGGGAGTATATATATAT C 4 . ID=chr18-1854756-DEL-122;SVTYPE=DEL;SVLEN=-122;TIG_REGION=h1tg016510l:33447-33447,h2tg002363l:153705-153705;QUERY_STRAND=+,-;HOM_REF=0,22;HOM_TIG=0,22;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=37.0 GT:DR:DV:GQ:SUPP 1/1:.:7:19:3 chr18 1872733 pbsv.DEL.51 TTCAAAAATATGGTCATTCAGAAAATATATATTTC T 2 PASS SVTYPE=DEL;SVLEN=-34;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,5,2:4 -chr18 1955407 chr18-1955408-INS-64;pbsv.INS.52 A ACAGGGGACGTGGGGCACAGGGGTCCCACGGCTCCTTCAGCCGCTCCTGCTGCCGCTTCTGCCGC 4 PASS ID=chr18-1955408-INS-64;SVTYPE=INS;SVLEN=64;TIG_REGION=h1tg003898l:15835-15898;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=38.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:4:18:7 +chr18 1955407 chr18-1955408-INS-64;pbsv.INS.52 A ACAGGGGACGTGGGGCACAGGGGTCCCACGGCTCCTTCAGCCGCTCCTGCTGCCGCTTCTGCCGC 4 PASS ID=chr18-1955408-INS-64;SVTYPE=INS;SVLEN=64;TIG_REGION=h1tg003898l:15835-15898;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=38.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:3:4:18:7 chr18 1962735 pbsv.DEL.53 ATATATATATACTACATCTATAGTATGTATGTG A 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,6:9:0,3,2,4:4 chr18 1963003 pbsv.INS.54 G GTACGTATGTGTATATATATACTACATCTATATGTAGTATGTATGTGTATATATATACTACATC 2 PASS SVTYPE=INS;SVLEN=63;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:0,3,1,4:4 -chr18 2066603 chr18-2066604-INS-814;pbsv.INS.55 A ACTTATGTACATTTATGAGCCAAAAAACATATCATAACCATCAGCAAACTGAATCTAGTAATGTATAAAAAATATCAAATAGAGCATTAATTACTTGCTCATGCTAGGAATACAAAGTAGGTTTAATATAAAATCAATTCATGAATATCATCGCAATAATCATTTATGTATTAAAAAGTCAATTATAATTACAACAGATGCAGAAAATGAATCCTATAGAATTCTATATCAAAGCATGATTTTTTTAAAAAATAGTGAATTAGGAATAAAATAACTCTCCCATAACATAACAAAATCTTCAGTGGACATCACGTTAAACATATGACATTCTAAGCATTTCCTTGAAAATTTAGAACCAGCTAATGATGCATAACATCACCACTTATGTTCAGTGGTGAACTGGAGATTCTATACTGTTCAGTAGAACAAGAAAATAAATAAAAGGTATAAGGATTGGAGTAGAAAAAACAAGGCTGTAATTTTGGCAAATAGACTATCTACTATCCACTAGACTATCCAATAGAATCAACAGATTGTCATTACAACTATTATGCACACATTTTTATGTTATGACATGTGACATTATAAAGAGTACTACATAATGAAAAAAATTAGCTAGTCCTGTAATGAAATCAATGCAAGCAGAGAAAACACGGGGATATTAGGTTCAATTATTTAAATATTCTAATGGTCCCTATCTAAATGTGTTCTTCCACAGATGACCCAAATAACAATTTTCATATAATATTGCTTTTGTTGGCATAATCCCCAGTTCTCCCCTTCTACAAGCTCTACAAATATCAGAAATACTGGAG 4 PASS ID=chr18-2066604-INS-814;SVTYPE=INS;SVLEN=814;TIG_REGION=h1tg003898l:127160-127973;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=40.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 +chr18 2066603 chr18-2066604-INS-814;pbsv.INS.55 A ACTTATGTACATTTATGAGCCAAAAAACATATCATAACCATCAGCAAACTGAATCTAGTAATGTATAAAAAATATCAAATAGAGCATTAATTACTTGCTCATGCTAGGAATACAAAGTAGGTTTAATATAAAATCAATTCATGAATATCATCGCAATAATCATTTATGTATTAAAAAGTCAATTATAATTACAACAGATGCAGAAAATGAATCCTATAGAATTCTATATCAAAGCATGATTTTTTTAAAAAATAGTGAATTAGGAATAAAATAACTCTCCCATAACATAACAAAATCTTCAGTGGACATCACGTTAAACATATGACATTCTAAGCATTTCCTTGAAAATTTAGAACCAGCTAATGATGCATAACATCACCACTTATGTTCAGTGGTGAACTGGAGATTCTATACTGTTCAGTAGAACAAGAAAATAAATAAAAGGTATAAGGATTGGAGTAGAAAAAACAAGGCTGTAATTTTGGCAAATAGACTATCTACTATCCACTAGACTATCCAATAGAATCAACAGATTGTCATTACAACTATTATGCACACATTTTTATGTTATGACATGTGACATTATAAAGAGTACTACATAATGAAAAAAATTAGCTAGTCCTGTAATGAAATCAATGCAAGCAGAGAAAACACGGGGATATTAGGTTCAATTATTTAAATATTCTAATGGTCCCTATCTAAATGTGTTCTTCCACAGATGACCCAAATAACAATTTTCATATAATATTGCTTTTGTTGGCATAATCCCCAGTTCTCCCCTTCTACAAGCTCTACAAATATCAGAAATACTGGAG 4 PASS ID=chr18-2066604-INS-814;SVTYPE=INS;SVLEN=814;TIG_REGION=h1tg003898l:127160-127973;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=40.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:5:13:7 chr18 2158970 chr18-2158971-INS-116;pbsv.INS.56 G GAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAATA 4 PASS ID=chr18-2158971-INS-116;SVTYPE=INS;SVLEN=116;TIG_REGION=h1tg022308l:381-496,h2tg015734l:48806-48901;QUERY_STRAND=+,+;HOM_REF=0,1;HOM_TIG=0,1;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=41.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:3:8:7 chr18 2472724 chr18-2472725-DEL-114;pbsv.DEL.57 GTCTCTTGCGTTTTTGGCTGTGAAAAGTGGAAGGGCCACATCTCTCTTTCTGGAAAAGGTTTAAAAAATGTGCTACAAAGGAATTATTTATTTGGGATTTTGGTCTTGTATGATA G 4 PASS ID=chr18-2472725-DEL-114;SVTYPE=DEL;SVLEN=-114;TIG_REGION=h1tg015140l:16418-16418,h2tg016950l:54141-54141;QUERY_STRAND=+,+;HOM_REF=0,1;HOM_TIG=0,1;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=42.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:11:30:7 chr18 2491082 chr18-2491083-INS-58 C CTCTCCATTTCTCGTCTTTGCTTGTCTCTGGTTGCTGATCCCAATACCTCACTGTGGCA 4 . ID=chr18-2491083-INS-58;SVTYPE=INS;SVLEN=58;TIG_REGION=h2tg013000l:4803-4860;QUERY_STRAND=+;HOM_REF=0,58;HOM_TIG=0,58;AC=1 GT:SUPP 0/1:1 @@ -198,7 +198,7 @@ chr18 2708890 pbsv.INS.DUP.62 A ATATATATATATATATATA 0 PASS SVTYPE=INS;SVLEN=18;A chr18 2745186 pbsv.INS.63 T TTTATTTTAAAAAATTAAAAAAA 2 PASS SVTYPE=INS;SVLEN=22;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:2,4,0,1:4 chr18 2858557 pbsv.DEL.64 ATATATATATATATGTGTGTGTGTGTG A 2 PASS SVTYPE=DEL;SVLEN=-26;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:2,3,1,2:4 chr18 2869768 pbsv.DEL.65 CTGTGTGTGTGTGTGTGTTTGTGTG C 2 PASS SVTYPE=DEL;SVLEN=-24;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:2,2,0,3:4 -chr18 2997378 chr18-2997379-DEL-81;pbsv.DEL.66 CAGCCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACTGCACCTGGCAGAGGCTTGTATTTTTCTAAACATAACAAATTCA C 4 PASS ID=chr18-2997379-DEL-81;SVTYPE=DEL;SVLEN=-81;TIG_REGION=h1tg015683l:143824-143824,h2tg005504l:49882-49882;QUERY_STRAND=-,+;HOM_REF=0,1;HOM_TIG=0,1;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=45.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:3:11:7 +chr18 2997378 chr18-2997379-DEL-81;pbsv.DEL.66 CAGCCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACTGCACCTGGCAGAGGCTTGTATTTTTCTAAACATAACAAATTCA C 4 PASS ID=chr18-2997379-DEL-81;SVTYPE=DEL;SVLEN=-81;TIG_REGION=h1tg015683l:143824-143824,h2tg005504l:49882-49882;QUERY_STRAND=-,+;HOM_REF=0,1;HOM_TIG=0,1;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=45.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:2:3:11:7 chr18 3016165 chr18-3016166-INS-53;pbsv.INS.67 G GTCACTCCTGCTCTAGCTCTCTGCAGAGCTACTCTATTGGCCACTTTGAGGGCT 4 PASS ID=chr18-3016166-INS-53;SVTYPE=INS;SVLEN=53;TIG_REGION=h1tg015683l:125055-125107,h2tg005504l:68598-68650;QUERY_STRAND=-,+;HOM_REF=0,0;HOM_TIG=0,0;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=46.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:9:25:7 chr18 3018802 pbsv.INS.68 T TATTTTCTACTTGAGTAAACCGGCGTCTAGGG 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=31;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:3,5,0,1:4 chr18 3103003 chr18-3103004-INS-69;pbsv.INS.69 A ACATGCAATCAGTCATCAGGGAAGGATAGAGATGAAGAACCCAAAAGGAAATTGAATGGGAGAAAGTCCG 4 PASS ID=chr18-3103004-INS-69;SVTYPE=INS;SVLEN=69;TIG_REGION=h1tg015683l:38145-38213,h2tg005504l:155496-155564;QUERY_STRAND=-,+;HOM_REF=0,135;HOM_TIG=0,135;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=47.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:9:25:7 @@ -208,13 +208,13 @@ chr18 3147125 pbsv.INS.72 T TATATTATAGATAAATATATATATTTATATATAAA 2 PASS SVTYPE=IN chr18 3245151 pbsv.INS.73 T TGGGGGGGGGGGAGGGGGGGGGGGG 2 PASS SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:2,5,1,0:4 chr18 3272251 chr18-3272252-INS-52 A AATTGAGGCTCAGAGAGGTTATGTTATACTGGTAGTAAAATGGGAATAAGAGG 4 . ID=chr18-3272252-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h1tg005143l:48508-48559,h2tg004919l:48508-48559;QUERY_STRAND=+,+;HOM_REF=0,51;HOM_TIG=0,51;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=49.0 GT:DR:DV:GQ:SUPP 1/1:.:8:22:3 chr18 3272252 pbsv.INS.DUP.74 A ATTGAGGCTCAGAGAGGTTATGTTATACTGGTAGTAAAATGGGAATAAGA 0 PASS SVTYPE=INS;SVLEN=49;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 -chr18 3421221 chr18-3421222-INS-71;pbsv.INS.75 T TTACTATACTATATATATACATTTATATATAGTATATAAAATATATATATATTTGAGATGGAGTTTGCGTCC 4 PASS ID=chr18-3421222-INS-71;SVTYPE=INS;SVLEN=71;TIG_REGION=h1tg007106l:36125-36195;QUERY_STRAND=+;HOM_REF=0,70;HOM_TIG=0,70;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=50.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:4:11:7 +chr18 3421221 chr18-3421222-INS-71;pbsv.INS.75 T TTACTATACTATATATATACATTTATATATAGTATATAAAATATATATATATTTGAGATGGAGTTTGCGTCC 4 PASS ID=chr18-3421222-INS-71;SVTYPE=INS;SVLEN=71;TIG_REGION=h1tg007106l:36125-36195;QUERY_STRAND=+;HOM_REF=0,70;HOM_TIG=0,70;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=50.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:4:11:7 chr18 3551164 pbsv.DEL.76 TATATATATATATACACATACATATAA T 2 PASS SVTYPE=DEL;SVLEN=-26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,10:11:1,0,4,6:4 chr18 3551581 pbsv.DEL.77 TTTTCTTTCTTTCTTTTTCTTTTTC T 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,10:11:1,0,4,6:4 chr18 3600841 chr18-3600842-INS-72 T TTAGATATATATAGATATATAGATATATATAGATATATAGATATATAGATATAATAGATATTATAGATAATAG 4 . ID=chr18-3600842-INS-72;SVTYPE=INS;SVLEN=72;TIG_REGION=h1tg020728l:1090-1161;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 chr18 3600881 pbsv.INS.78 G GATATAATAGATATATAGATAATAGATATATATAGATAGATGTAT 2 PASS SVTYPE=INS;SVLEN=44;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,0,2:4 -chr18 3609927 chr18-3609928-INS-448;pbsv.INS.79 A ACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCATGACAATCGCTTGAGCCTGGGAGGCGGAAGTTGTGGTGAGCCGAGATCGCCCCACTGCACTCCAGCCTGGGCGACAGAGACGCTGTCTCAAAAAAAAAGAAAACCATCTTGGAAACTCTGAGGGTTCTTTTTTGAGGGGGAAAGTTCATACTTTTAAGATGCTTTGGTTCCTACTGCATGAAGAGCCCCGCGATGAGTGCGTGTGAATGCATATGTTGAGATGCCTTTTCCTAGTGCTTAATATTAAAAATTCATCTCGGCCAGGCACGGTGCCTCACACCTGTAATCCCAGCACTTTAGGAGGCTGAGGCGGGCGGATCACCTGAGGTCGAGAGTTCGAGACCAGCCTGGCCAACATGAAGAAACTCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGCG 4 PASS ID=chr18-3609928-INS-448;SVTYPE=INS;SVLEN=448;TIG_REGION=h1tg004996l:83762-84209;QUERY_STRAND=-;HOM_REF=0,37;HOM_TIG=0,37;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=52.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:7:.:7 -chr18 3618666 chr18-3618667-INS-891;pbsv.INS.80 G GGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGTTTGATACCAGCCTGACCAACATGGTGAAACCCTGACTCTACTAAAAATACAAAAATTAGCCGGGCTTGGTGGTGTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGATATTGTACCATTGCACTCCAACCTAGGCGACGGAGTGAGACTCTGTCTCAAAAAACAAAACAAACAAGCAAAAAACAAACAAACAAAACAGGCAGTTTTGGGTTGTGGGGCACACTTTTTTTTTTTTTTTTTCTGAGATGGGAGTCTCACTCCGTCACCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTGTTTTTCTGTTTTCAGTACAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTAACCTCCTGATCTGCTCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCTCGGCCCCCAGAGCACACTTTTAAAGTTAACAGCTTGGCCTCCCTCTCCCAGCATTCATCCTCACTGGGCCTAGTCCGCCTGTTACACCAGGGAAGAACTGAGTGATCTTTCTTAACTTCCCAGGATCTTAGCCCAATGCTATGGCCACTTGTGTCCCCCACCCCCCCAACAAATGCATATGTTGAAGTCCTAACTCTCAGAATGTAACTGTCTTGAGAGATAGGGTCTTTAAAGAGATGATTAGGCCAGGGGT 4 PASS ID=chr18-3618667-INS-891;SVTYPE=INS;SVLEN=891;TIG_REGION=h1tg004996l:74129-75019,h2tg010351l:2850-3739;QUERY_STRAND=-,+;HOM_REF=0,41;HOM_TIG=0,41;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=53.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:6:16:7 +chr18 3609927 chr18-3609928-INS-448;pbsv.INS.79 A ACATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCATGACAATCGCTTGAGCCTGGGAGGCGGAAGTTGTGGTGAGCCGAGATCGCCCCACTGCACTCCAGCCTGGGCGACAGAGACGCTGTCTCAAAAAAAAAGAAAACCATCTTGGAAACTCTGAGGGTTCTTTTTTGAGGGGGAAAGTTCATACTTTTAAGATGCTTTGGTTCCTACTGCATGAAGAGCCCCGCGATGAGTGCGTGTGAATGCATATGTTGAGATGCCTTTTCCTAGTGCTTAATATTAAAAATTCATCTCGGCCAGGCACGGTGCCTCACACCTGTAATCCCAGCACTTTAGGAGGCTGAGGCGGGCGGATCACCTGAGGTCGAGAGTTCGAGACCAGCCTGGCCAACATGAAGAAACTCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCATGGTGGCG 4 PASS ID=chr18-3609928-INS-448;SVTYPE=INS;SVLEN=448;TIG_REGION=h1tg004996l:83762-84209;QUERY_STRAND=-;HOM_REF=0,37;HOM_TIG=0,37;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=52.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:7:.:7 +chr18 3618666 chr18-3618667-INS-891;pbsv.INS.80 G GGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGTTTGATACCAGCCTGACCAACATGGTGAAACCCTGACTCTACTAAAAATACAAAAATTAGCCGGGCTTGGTGGTGTGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGATATTGTACCATTGCACTCCAACCTAGGCGACGGAGTGAGACTCTGTCTCAAAAAACAAAACAAACAAGCAAAAAACAAACAAACAAAACAGGCAGTTTTGGGTTGTGGGGCACACTTTTTTTTTTTTTTTTTCTGAGATGGGAGTCTCACTCCGTCACCCAGGCTGGAGCGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGTCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTGTTTTTCTGTTTTCAGTACAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTAACCTCCTGATCTGCTCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCTCGGCCCCCAGAGCACACTTTTAAAGTTAACAGCTTGGCCTCCCTCTCCCAGCATTCATCCTCACTGGGCCTAGTCCGCCTGTTACACCAGGGAAGAACTGAGTGATCTTTCTTAACTTCCCAGGATCTTAGCCCAATGCTATGGCCACTTGTGTCCCCCACCCCCCCAACAAATGCATATGTTGAAGTCCTAACTCTCAGAATGTAACTGTCTTGAGAGATAGGGTCTTTAAAGAGATGATTAGGCCAGGGGT 4 PASS ID=chr18-3618667-INS-891;SVTYPE=INS;SVLEN=891;TIG_REGION=h1tg004996l:74129-75019,h2tg010351l:2850-3739;QUERY_STRAND=-,+;HOM_REF=0,41;HOM_TIG=0,41;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=53.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 chr18 3741020 chr18-3741021-INS-164;pbsv.INS.81 C CCACCACCACCACCACCATCACCTCACCACCACCACCATCACCACCACCACCACCACCACCATCACCATCACCACCACCACCACCATCACCACCACCATCACCACCACCACCACATCACCTCACCACCACCACCACCATCACCACCACCATCACCACCATCACCT 4 PASS ID=chr18-3741021-INS-164;SVTYPE=INS;SVLEN=164;TIG_REGION=h2tg010351l:126084-126247;QUERY_STRAND=+;HOM_REF=0,82;HOM_TIG=0,82;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=54.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:4:26:7 chr18 3741094 pbsv.INS.82 C CCACCACCATCACCATCACCACCACCACCATCACCAT 2 PASS SVTYPE=INS;SVLEN=36;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,3:10:4,3,3,0:4 chr18 3772342 pbsv.DEL.83 CTCTCTCTTTCTTTCTTTCTT C 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:1,1,0,2:4 @@ -242,7 +242,7 @@ chr18 4874671 Sniffles2.INS.34S11 A AAAAGCCACTTACAAATAAAATATAGGAATGTATTGCCAGCAGA chr18 5091247 pbsv.INS.104 T TTTTATTTATTTATTTATTTA 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:2,1,0,4:4 chr18 5306830 chr18-5306831-DEL-486 TGTATACATATATGTGTATGTACATATATGTATACATATATGTATATGTACATATATGTATACATATATGTGTATGTACATATATGTATACATATATGTGTATGTACATATATGTACATATGTGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATACGTATACATATATGTGTATGTACATATAC T 4 . ID=chr18-5306831-DEL-486;SVTYPE=DEL;SVLEN=-486;TIG_REGION=h1tg010059l:1037-1037,h2tg021633l:32498-32498;QUERY_STRAND=+,-;HOM_REF=0,27;HOM_TIG=0,14;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=64.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,7:8:.:7:19:1,0,5,2:7 chr18 5308216 chr18-5308217-DEL-56;pbsv.DEL.106 ATATGTATATATACGTATATATGTATATGTATACATATATACATATATATGTATATG A 4 PASS ID=chr18-5308217-DEL-56;SVTYPE=DEL;SVLEN=-56;TIG_REGION=h2tg021633l:31622-31622;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=65.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:5:16:7 -chr18 5308540 chr18-5308541-INS-88 C CATATATGTGTGTATATATATATACACATATATATGTGTGTGTATATATATACACATATATATGTGTGTGTATATATATATATACACAT 4 . ID=chr18-5308541-INS-88;SVTYPE=INS;SVLEN=88;TIG_REGION=h2tg021633l:31266-31353;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,27;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=65.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,7:7:3:5:16:0,0,5,2:7 +chr18 5308540 chr18-5308541-INS-88 C CATATATGTGTGTATATATATATACACATATATATGTGTGTGTATATATATACACATATATATGTGTGTGTATATATATATATACACAT 4 . ID=chr18-5308541-INS-88;SVTYPE=INS;SVLEN=88;TIG_REGION=h2tg021633l:31266-31353;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,27;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=65.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,7:7:3:5:16:0,0,5,2:7 chr18 5324644 chr18-5324645-DEL-1599;pbsv.DEL.108 ACACATATATATGTTTGTAATGAAAATATTGAAAGAAAAAGAGCATATTGTGTGAGGGTCCAAGATGGCAGATTAGAAGAAGCTGCAGTCCATGGCTGTCATGGAGAAGAATGAAAACAGTGAGTGAATTCAGCACCTTCAACAGAAATACCCAGGTTCCTGCATTGGGACTGACTAGGTGGACAACTTGACCTTCAGAGAATGAAGAAAGGCGGGGTGGGGCAACAAGCCACCTGGGAGCAGCACAGAGCCAGAGGAACTCCTGCTCCCAACCAAGGGGAGTGGTGAGTGATTGTGCAACCCTGCCCAGGAAACCACACTTCTCCCATGGATCTTTGCAAACCATGGATCAAGAGATCCCCTCGTGAGCCCATACTACCAGGGCCTTGGCTCTGATCCACAGCGTTGCCCAGAATCTTGGCAGAGCAGCCGCTCAGGCACACACAGAGACCCAGGAGTTTTACATACTCCAGCCCCGGAAATCCCGGTGAGGTGGGAGATTCATCTGTACATTACCCTAGAAAGGGGGTGGAATCCAGGAAGCCAAGCAGCATCATTCTGCAGGCCCAACTTCCGCAACACCTCACAAGTTAAGATCCACTGGCTTGGAATTCCAGCCAGCCAGCTACACCAGGCTGGAGAGACTGCCTGAGATGGACCAACTTCTAGTGGGAAGGGGCGACCACTGTCACTATTGTTCAGTCGACTCAGCCATTCTAGCCTGCTGGCTCCAGAGAGTCCAGGCGGTCCAGAGAAGGAGGAGTCCCCCACAATGCAGCATAGCTGCTGTATTTTTGAAAAAAATTAATAAAATAGATAGACCACTATCTAGACTAACAAAGAAGAAAAGGGAGAATAATCAAATAGACACAATCAGAAATGTTAAGGGGATATCGCTACTGATCCCACAGAAATACAAACAACAATCAGAATATTATAAACACCTGTATGCACATAAACTAGAAAATCTAGAAGACTGGATATATTTCTGGACACATACACTTCCCAAGACTGTACGAGGAAGAAATTGAATCCCTGAACACACCAATAATGAGTTTTGAAATTGAGGCAGTAATAAATAGCCTACCAACCAAAAAAAGCCCAGGACCCAATGGATTTACCCCTGAATTCTAACACAGAAGATCTGGTACCATTCCTACTGGAACTATTCTGAAAAATTGAAAAGGAGGGACTCCTCCCTAACTCATTTTACGAGGCCAGCATTATCCTGATACCAAAACCTGGCAGAAATACAACAAAAAAGGAGAAAACTTTAGGCCAATATCCTTTATGAACATCAATGTAAAAATCCTCAATAAAATACTGGTAAACCGAATCCAGCGGCTCATCAAAATGCTTATCCACCATGACCAACTTGACAGCATCCCTGGGATGTAAGCTTGGTTTAACATATGCAAATCAATAAATGTGATTCATCACATAAACAGAACTAAAGACAAAAACTATATGATTACCTCATAGATGCAGAAAAGATCTCAGGTAAAATTTAACATTCCTTCATGTTAAAAACTCTCAATAAACCAGGTGTTGAAGGAATATACCTCAAAATGGTAAGAGCCATATATGACAAACCCAAAAC A 4 PASS ID=chr18-5324645-DEL-1599;SVTYPE=DEL;SVLEN=-1599;TIG_REGION=h2tg021633l:15151-15151;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=66.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:4:26:7 chr18 5457106 pbsv.DEL.109 AAAAACTGAAACCATAAGGCAAACCGCACTCTCAACATGGCTTCAAGATAGGTACAGCCTTTTCCTGTAAGCAACAACTCTACCGTTCTTTTATCTGTAGG A 2 PASS SVTYPE=DEL;SVLEN=-100;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=67.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:5:6:6 chr18 5499829 pbsv.INS.110 G GTGTGTATATATATATATATATATATATATATA 2 PASS SVTYPE=INS;SVLEN=32;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,6:10:2,2,1,5:4 @@ -254,7 +254,7 @@ chr18 6003021 chr18-6003022-DEL-70;pbsv.DEL.115 AAGTATCTCTATTTATAGAGATACTATATAAA chr18 6099585 pbsv.INS.116 A AATATATATATATATATATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=34;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,6,3:4 chr18 6118211 pbsv.INS.117 A ACACACACACACACACACACACACAC 2 PASS SVTYPE=INS;SVLEN=25;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,1,2:4 chr18 6272575 Sniffles2.INS.37S11 C CCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTGCCTTCAGGAGCATGGGGAAAGGGGGAGTTGTGCAAATTCAACTAGGACTGAATATAAGGAATACAGAAGAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTACCTTCAGGAGCATGGGGAAAGGGGGAGTTGTGCAAATTCAACTAGGACTGAATATAAGGAACACAGAACAGTTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTGCCCTTCAGGAGCACGGGGAAAGGGAGAGGTTGTGCAAATTCAACTAGGACTGAATATAAGGAATACAGAACAGTTCTGACAGC 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=351;SUPPORT=3;COVERAGE=5,6,6,6,6;STRAND=+-;AF=0.5;STDEV_LEN=2.646;STDEV_POS=25.981;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=69.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:3,3:6:1,2,1,2:6 -chr18 6272635 chr18-6272636-DEL-468 GGAGTTGTGCAAATTCAACTAGGACTGAATATAAGGAATACAGAACAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTGCCTTCAGGAGCACGGGGAAAGGGAGAGTTGTGCAAATTCAACTAGGACTGAATATAAGGAATACAGAACAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGTGGTGCCTTCAGGAGCATGGGGAAAGGGGGAGTTGTGCAGATTCAACTAGGACTGAATATAAGGAATACAGAAGAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTGCCTTCAGGAGCACGGGGAAAGGGAGAGTTGTGCAAATTCAACTAGGACTGAATATAAGGAATACAGAACAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTGCCTTCAGGAGCACGGGGAAAGGGA G 4 . ID=chr18-6272636-DEL-468;SVTYPE=DEL;SVLEN=-468;TIG_REGION=h1tg002405l:95418-95418;QUERY_STRAND=-;HOM_REF=0,205;HOM_TIG=0,10;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=69.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,3:7:3:3:21:2,2,1,2:7 +chr18 6272635 chr18-6272636-DEL-468 GGAGTTGTGCAAATTCAACTAGGACTGAATATAAGGAATACAGAACAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTGCCTTCAGGAGCACGGGGAAAGGGAGAGTTGTGCAAATTCAACTAGGACTGAATATAAGGAATACAGAACAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGTGGTGCCTTCAGGAGCATGGGGAAAGGGGGAGTTGTGCAGATTCAACTAGGACTGAATATAAGGAATACAGAAGAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTGCCTTCAGGAGCACGGGGAAAGGGAGAGTTGTGCAAATTCAACTAGGACTGAATATAAGGAATACAGAACAGTTCTGACAGCCCCACTGCATTAAACTGGTGGTTCTACAGAGCGGTGCCTTCAGGAGCACGGGGAAAGGGA G 4 . ID=chr18-6272636-DEL-468;SVTYPE=DEL;SVLEN=-468;TIG_REGION=h1tg002405l:95418-95418;QUERY_STRAND=-;HOM_REF=0,205;HOM_TIG=0,10;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=69.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,3:7:3:3:21:2,2,1,2:7 chr18 6314036 pbsv.DEL.120 TGATAGATAGATAGATAGATA T 2 PASS SVTYPE=DEL;SVLEN=-20;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,5:10:4,1,0,5:4 chr18 6405615 pbsv.INS.121 C CCCTAAACACAGGGGCTGGGCCCGAGGGCCC 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:1,3,2,1:4 chr18 6461950 chr18-6461951-DEL-58 GTTATAGTGTTGTTCCATGTTCTCTATTTTCTCATGTATCTTCTGTCTATATGTTCTAT G 4 . ID=chr18-6461951-DEL-58;SVTYPE=DEL;SVLEN=-58;TIG_REGION=h2tg001864l:178183-178183;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;AC=1 GT:SUPP 0/1:1 @@ -272,26 +272,26 @@ chr18 7357546 pbsv.DEL.132 ATATATTTTTTTTTTTTTTTTT A 2 PASS SVTYPE=DEL;SVLEN=-21; chr18 7419636 pbsv.DEL.133 TGAGGGAAAAAAGGAGAAAAAGATAGAACAGAGCG T 2 PASS SVTYPE=DEL;SVLEN=-34;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,7:12:3,2,4,3:4 chr18 7549149 chr18-7549150-INS-74 T TGGTGGGTAAATGAAATACACTTAATATTTGCATTTGTAGTAGTTAACATAAGATTTCAAGGGGGGAAAAAGAGA 4 . ID=chr18-7549150-INS-74;SVTYPE=INS;SVLEN=74;TIG_REGION=h1tg011401l:52503-52576,h2tg011037l:52503-52576;QUERY_STRAND=-,-;HOM_REF=0,70;HOM_TIG=0,70;AC=2 GT:SUPP 1/1:1 chr18 7692015 Sniffles2.INS.39S11 G GGGAGGATGGCTAGATCCCAGGGAGGTTAAGGAGGTGGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTG 3 PASS PRECISE;SVTYPE=INS;SVLEN=72;SUPPORT=4;COVERAGE=12,13,13,12,12;STRAND=+-;AF=0.308;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=74.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:9,4:13:5,4,1,3:6 -chr18 7692286 chr18-7692287-INS-140 T TGGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTGGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTGGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTG 4 . ID=chr18-7692287-INS-140;SVTYPE=INS;SVLEN=140;TIG_REGION=h1tg016548l:40524-40663,h2tg016022l:40524-40663;QUERY_STRAND=-,-;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=74.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:5,8:13:4:8:17:1,4,5,3:7 +chr18 7692286 chr18-7692287-INS-140 T TGGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTGGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTGGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTGGAGGATGGCTAGATCCCAGGAGGTTAAGGAGGTG 4 . ID=chr18-7692287-INS-140;SVTYPE=INS;SVLEN=140;TIG_REGION=h1tg016548l:40524-40663,h2tg016022l:40524-40663;QUERY_STRAND=-,-;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=74.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:5,8:13:4:8:17:1,4,5,3:7 chr18 7772408 pbsv.DEL.136 TTTCTTTTCTTTCTTTCTCCCTTCCCCTTC T 2 PASS SVTYPE=DEL;SVLEN=-29;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 chr18 7819360 pbsv.INS.DUP.137 G GAAGAAGATAGAAGCGGCTGGATGTTGAGGGGAGCACACTGGC 0 PASS SVTYPE=INS;SVLEN=42;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,4,5:4 chr18 7834491 pbsv.INS.138 T TACACACACACACACACATACACACAC 2 PASS SVTYPE=INS;SVLEN=26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:2,13:15:2,0,4,9:4 chr18 7985469 chr18-7985470-INS-256;pbsv.INS.139 G GTAAATATATACATATACTGGTAGATACGTATATAAATATATACATATACTGGTAGATACGTATATAAATATATACATATACTGGTAGATACGTATATAAATATATACATATACTGGTAGATACGTATATAAATATATACATATACTGGTAGATACGTATATAAATATATACATATACTGGTAGATACGTATATAAATATATACATATACTGGTAGATACGTATATAAATATATACATATACTGGTAGATACGTATA 4 PASS ID=chr18-7985470-INS-256;SVTYPE=INS;SVLEN=256;TIG_REGION=h1tg006187l:252429-252684,h2tg005960l:165611-165866;QUERY_STRAND=-,-;HOM_REF=0,176;HOM_TIG=0,176;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=75.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:4:1:7 chr18 8125976 pbsv.DEL.140 CATATATATATATATATATATATATAT C 2 PASS SVTYPE=DEL;SVLEN=-26;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,7:10:1,2,3,4:4 -chr18 8289514 chr18-8289515-DEL-50 GTATATATATACATATATATACACATATATATATATACATATATATACACA G 4 . ID=chr18-8289515-DEL-50;SVTYPE=DEL;SVLEN=-50;TIG_REGION=h1tg003871l:29510-29510;QUERY_STRAND=-;HOM_REF=0,10;HOM_TIG=0,10;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=76.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,6:10:3:6:13:4,0,3,3:7 +chr18 8289514 chr18-8289515-DEL-50 GTATATATATACATATATATACACATATATATATATACATATATATACACA G 4 . ID=chr18-8289515-DEL-50;SVTYPE=DEL;SVLEN=-50;TIG_REGION=h1tg003871l:29510-29510;QUERY_STRAND=-;HOM_REF=0,10;HOM_TIG=0,10;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=76.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,6:10:3:6:13:4,0,3,3:7 chr18 8376729 pbsv.INS.142 C CTCGTTACTCTATTCCTCCCCCTCC 2 PASS SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:3,4,1,0:4 chr18 8634167 chr18-8634168-DEL-116;pbsv.DEL.143 TGGTGACTCACACCTGTAATCCCAGCACTTTGGAAGGCCAAAGCAAGAGGATCACTTGAACCCAGGAGGTCGAGACCAGCCTGGGCAACATAGTGGGACTCCATCTCTCTCTCTCTC T 4 PASS ID=chr18-8634168-DEL-116;SVTYPE=DEL;SVLEN=-116;TIG_REGION=h2tg019833l:757-757;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=77.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:2:11:7 chr18 8659391 chr18-8659392-DEL-56;pbsv.DEL.144 AATGCGCAGACTTCCATGTTCGTTGGAAGCCTCCCTTCCTGACTGTGAATTGGGACG A 4 PASS ID=chr18-8659392-DEL-56;SVTYPE=DEL;SVLEN=-56;TIG_REGION=h2tg020350l:13711-13711;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,6;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=78.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:7:20:7 chr18 8726495 pbsv.DEL.145 GCGCGCGCGCGCGCAAGAGCGAGCGAGAGAG G 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:3,0,1,3:4 chr18 8729673 pbsv.DEL.146 AATATATATATATATATATATATATATATATATATATATATAT A 2 PASS SVTYPE=DEL;SVLEN=-42;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,4,3:4 chr18 8882463 pbsv.DEL.147 CTTTTGGGGTGAGGCTCAGTTTCCCCACTGGAAATTTCTTGTG C 2 PASS SVTYPE=DEL;SVLEN=-42;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,2:8:5,1,2,0:4 -chr18 8934744 chr18-8934745-DEL-102;pbsv.DEL.148 GAGTGAAGCTGCAGACCTTCGCGGTGAGTGTTACAGCTCTTAAGGCAGCACGTCTGGAGTTGTTCGTTCCTCCTGGTGGGCTCGTGGTCTCGCTGGGCTCAGA G 4 PASS ID=chr18-8934745-DEL-102;SVTYPE=DEL;SVLEN=-102;TIG_REGION=h1tg019477l:4413-4413;QUERY_STRAND=+;HOM_REF=0,8;HOM_TIG=0,8;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 0/1:3,1:4:0,3,1,0:5 +chr18 8934744 chr18-8934745-DEL-102;pbsv.DEL.148 GAGTGAAGCTGCAGACCTTCGCGGTGAGTGTTACAGCTCTTAAGGCAGCACGTCTGGAGTTGTTCGTTCCTCCTGGTGGGCTCGTGGTCTCGCTGGGCTCAGA G 4 PASS ID=chr18-8934745-DEL-102;SVTYPE=DEL;SVLEN=-102;TIG_REGION=h1tg019477l:4413-4413;QUERY_STRAND=+;HOM_REF=0,8;HOM_TIG=0,8;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/0:3,1:4:0,3,1,0:5 chr18 8963699 chr18-8963700-INS-282;pbsv.INS.149 C CACACACACACACACCAAACACATACCCCACACCATACCACACACAGACACCACACACACCACACACACAGACGTTGCACACATGCCCACCACACACACACACACACACACACAGACACCAAACACATACCTCACACCATACCACACCCACCCACCACACACACACAGACACACACATTACATTATACCATACACACACACACAAACTACACACACATATACCACACCACACATGCAGACATGGACACCAGACACATGTACACCACATGTCGCCCACAGATAG 4 PASS ID=chr18-8963700-INS-282;SVTYPE=INS;SVLEN=282;TIG_REGION=h1tg019477l:33267-33548,h2tg013908l:247221-247508;QUERY_STRAND=+,+;HOM_REF=0,14;HOM_TIG=0,14;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=80.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:13:36:7 chr18 9031435 pbsv.INS.DUP.150 C CTCTCTCTCTCTCTCTCTGTCT 0 PASS SVTYPE=INS;SVLEN=21;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,6:11:1,4,3,3:4 chr18 9035841 Sniffles2.INS.3ES11 T TGTATATATATATATATATATATGTGTATATATATATATATATATGTGTATATATATATATATATATA 3 PASS PRECISE;SVTYPE=INS;SVLEN=68;SUPPORT=6;COVERAGE=11,11,11,11,11;STRAND=+-;AF=0.545;STDEV_LEN=1;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=81.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:5,6:11:1,4,3,3:6 chr18 9036085 pbsv.DEL.152 TAGGGAAAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAA T 2 PASS SVTYPE=DEL;SVLEN=-289;SVANN=TANDEM;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=81.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:6:33:6 chr18 9036100 pbsv.INS.153 T TAAGATACCGGCCAGGAGCAGTGGCTCACGCCTGTAATTCCAACACTTTGGGAGGCCGAGGTGGGTGGTGGATCACTTGAGCCCAGAAGATTGAGACCAGCCTGGTCAATGTCTCTACAAAAAATATAAAAATTAGCCTGGCATGGTGGCATGCACCTG 2 PASS SVTYPE=INS;SVLEN=158;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,6:11:1,4,3,3:4 -chr18 9058020 chr18-9058021-INS-276;pbsv.INS.154 A AATCTAGCTGTGGCGTTACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTTACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAG 4 PASS ID=chr18-9058021-INS-276;SVTYPE=INS;SVLEN=276;TIG_REGION=h1tg024507l:28404-28679,h2tg022999l:28404-28679;QUERY_STRAND=+,+;HOM_REF=0,81;HOM_TIG=0,81;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=82.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:6:3:7 +chr18 9058020 chr18-9058021-INS-276;pbsv.INS.154 A AATCTAGCTGTGGCGTTACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTTACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAG 4 PASS ID=chr18-9058021-INS-276;SVTYPE=INS;SVLEN=276;TIG_REGION=h1tg024507l:28404-28679,h2tg022999l:28404-28679;QUERY_STRAND=+,+;HOM_REF=0,81;HOM_TIG=0,81;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=82.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:2:6:3:7 chr18 9058021 Sniffles2.INS.3FS11 A ATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAGATCTAGCTGTGGCGTCACCCCATGGCAGGATCCAGGATCCAATCAG 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=139;SUPPORT=3;COVERAGE=10,8,8,9,9;STRAND=+-;AF=0.375;STDEV_LEN=0.577;STDEV_POS=41.569;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=82.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:8,2:10:6,2,0,2:6 chr18 9088995 pbsv.DEL.156 TCTTCTTTCCTTCCTTCCTTCCTTCCTTC T 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,4:11:3,4,1,3:4 chr18 9122267 pbsv.DEL.157 AGGAGGAAGTGCTGTTAACTCCATTAA A 2 PASS SVTYPE=DEL;SVLEN=-26;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,3:9:3,3,2,1:4 @@ -300,17 +300,17 @@ chr18 9196125 Sniffles2.INS.41S11 A ACACACACACACACACACATTGAGGCTAACTGCCTCAGTGCTTT chr18 9225120 chr18-9225121-DEL-335;pbsv.DEL.159 AAGGCTTGTGAACTATTTGAATAAATAAACAATATAGGGATAGAATAGTCATCTATTTAAAGTATTAATTTGGCCAGGCACAGTGACTTATGCCTGTAATCCCAGCACTTTTGGGAAGTCGAGGCGGACAGATCACTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATGGTGAAACCCCATCTCTACAAAAAATACAAAAATTAGCCAGGCATGGTGGCGTGCGTCTGTAGTACCAGCTACTTGGGAGGCTGAGGTGGGAGAATGTCTTGAGCCCAGGAGGCGGAGGTTGCAAGGAGCTGAGGTCGTGCCACTGCATTCCAGCCTGGCTGAC A 4 PASS ID=chr18-9225121-DEL-335;SVTYPE=DEL;SVLEN=-335;TIG_REGION=h2tg020227l:132106-132106;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=84.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:6:6:43:7 chr18 9287069 chr18-9287070-INS-333;pbsv.INS.160 T TAATACTGTGTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 4 PASS ID=chr18-9287070-INS-333;SVTYPE=INS;SVLEN=333;TIG_REGION=h2tg025192l:14912-15244;QUERY_STRAND=-;HOM_REF=0,12;HOM_TIG=0,12;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=85.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:7:5:30:7 chr18 9343210 pbsv.DEL.161 TTATATATATATATATATATATATATATATATA T 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,7,3:4 -chr18 9385393 chr18-9385394-DEL-324;pbsv.DEL.162 TAAAAGAAAGAACGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA T 4 PASS ID=chr18-9385394-DEL-324;SVTYPE=DEL;SVLEN=-324;TIG_REGION=h1tg000788l:193736-193736;QUERY_STRAND=+;HOM_REF=0,13;HOM_TIG=0,13;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=86.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:3:18:7 -chr18 9401405 chr18-9401406-INS-326 A ACATGCCTAATGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG 4 . ID=chr18-9401406-INS-326;SVTYPE=INS;SVLEN=326;TIG_REGION=h1tg000788l:209424-209749;QUERY_STRAND=+;HOM_REF=0,18;HOM_TIG=0,18;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=87.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,5:8:3:5:16:3,0,2,3:7 +chr18 9385393 chr18-9385394-DEL-324;pbsv.DEL.162 TAAAAGAAAGAACGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA T 4 PASS ID=chr18-9385394-DEL-324;SVTYPE=DEL;SVLEN=-324;TIG_REGION=h1tg000788l:193736-193736;QUERY_STRAND=+;HOM_REF=0,13;HOM_TIG=0,13;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=86.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:3:18:7 +chr18 9401405 chr18-9401406-INS-326 A ACATGCCTAATGTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGCCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGG 4 . ID=chr18-9401406-INS-326;SVTYPE=INS;SVLEN=326;TIG_REGION=h1tg000788l:209424-209749;QUERY_STRAND=+;HOM_REF=0,18;HOM_TIG=0,18;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=87.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:3,5:8:3:5:16:3,0,2,3:7 chr18 9430536 pbsv.INS.164 C CCCCTCACCTCCCAGACGGGGCGGCCGGGCAGAGGCGC 2 PASS SVTYPE=INS;SVLEN=37;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,7:9:2,0,3,4:4 -chr18 9449182 chr18-9449183-INS-179 A ATATATAATTATATACTTGTATATAAATATATAATTATATACTTGTATATAAATATATAATTATATACTTGTATATAATTATATAATTATATACTTGTATATAATTATATAATTATATACTTGTATATAATTATATATTATATACTTGTATATATTATATAATTATATACAAGTATATAT 4 . ID=chr18-9449183-INS-179;SVTYPE=INS;SVLEN=179;TIG_REGION=h2tg010164l:124908-125086;QUERY_STRAND=+;HOM_REF=0,60;HOM_TIG=0,60;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=88.0 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,2,5:5 +chr18 9449182 chr18-9449183-INS-179 A ATATATAATTATATACTTGTATATAAATATATAATTATATACTTGTATATAAATATATAATTATATACTTGTATATAATTATATAATTATATACTTGTATATAATTATATAATTATATACTTGTATATAATTATATATTATATACTTGTATATATTATATAATTATATACAAGTATATAT 4 . ID=chr18-9449183-INS-179;SVTYPE=INS;SVLEN=179;TIG_REGION=h2tg010164l:124908-125086;QUERY_STRAND=+;HOM_REF=0,60;HOM_TIG=0,60;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=88.0 GT:AD:DP:SAC:SUPP 0/1:0,7:7:0,0,2,5:5 chr18 9449182 chr18-9449183-INS-156 A ATATATAATTATATACTTGTATATAAATATATAATTATATACTTGTATATAATTATATATTTATATACTTGTATATAATTATATAATTATATACAAGTATATAATTATATAATTATATACTTGTATATAATTATATAATTATATACTTGTATATAAT 4 . ID=chr18-9449183-INS-156;SVTYPE=INS;SVLEN=156;TIG_REGION=h1tg000788l:257573-257728;QUERY_STRAND=+;HOM_REF=0,51;HOM_TIG=0,51;AC=1 GT:SUPP 1/0:1 chr18 9449183 Sniffles2.INS.44S11 T TATATAATTATATACTGTATATAAATATATAATTATATACTTGTATATAAATATATAATTATATACTTGTATATAATTATATAATTATATACTTGTATATAATTATATAATTATATACTTGTATATAATTATATATTATATACTTGTATATATTATATAATTATATACAAGTATATAT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=170;SUPPORT=7;COVERAGE=7,7,7,7,8;STRAND=+-;AF=1;STDEV_LEN=11.082;STDEV_POS=14.311;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:19:0:7:2 chr18 9471574 pbsv.INS.DUP.166 T TATGATATATCATATATA 0 PASS SVTYPE=INS;SVLEN=17;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,6:10:0,4,3,3:4 chr18 9553490 pbsv.INS.167 T TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2 PASS SVTYPE=INS;SVLEN=30;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:5,3,0,1:4 chr18 9620378 chr18-9620379-INS-57 A ATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTTTTT 4 . ID=chr18-9620379-INS-57;SVTYPE=INS;SVLEN=57;TIG_REGION=h2tg012889l:99913-99969;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1 GT:SUPP 0/1:1 chr18 9620379 Sniffles2.INS.45S11 T TATATATATATATATATATATATATATATTATATATATTTTTTTTTTTTTTTT 3 PASS PRECISE;SVTYPE=INS;SVLEN=53;SUPPORT=3;COVERAGE=3,3,3,3,2;STRAND=+-;AF=1;STDEV_LEN=1.155;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=89.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:0,3:3:0,0,1,2:6 -chr18 9621931 chr18-9621932-DEL-306;pbsv.DEL.169 CGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATTGAAACCACCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATTAATCTGGGAGGCGAAGCTTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGTGGGAGACTCCGTCTTGGGGGGAAAAAAGAAAAAAAAGTTTAGCCGGGCGTGGTGGCTCAT C 4 PASS ID=chr18-9621932-DEL-306;SVTYPE=DEL;SVLEN=-306;TIG_REGION=h2tg012889l:101520-101520;QUERY_STRAND=+;HOM_REF=0,32;HOM_TIG=0,32;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=90.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:2:5:7 +chr18 9621931 chr18-9621932-DEL-306;pbsv.DEL.169 CGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATTGAAACCACCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATGCAAAAAATTAGCCGGGCGTGATGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCATTAATCTGGGAGGCGAAGCTTGCAGTGAGCCAAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGTGGGAGACTCCGTCTTGGGGGGAAAAAAGAAAAAAAAGTTTAGCCGGGCGTGGTGGCTCAT C 4 PASS ID=chr18-9621932-DEL-306;SVTYPE=DEL;SVLEN=-306;TIG_REGION=h2tg012889l:101520-101520;QUERY_STRAND=+;HOM_REF=0,32;HOM_TIG=0,32;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=90.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:2:5:7 chr18 9625195 pbsv.INS.DUP.170 T TAAAAAACAAAAAAAGAAAAT 0 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,0,1:4 chr18 9626591 pbsv.DEL.171 ATTGGTCGCTACCTTGCTTCATACACAAAAACCAATTCCAGATGAATTTAGTTACAAATAAGAAAGGTAAA A 2 PASS SVTYPE=DEL;SVLEN=-70;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,0,1:4 chr18 9636769 pbsv.DEL.172 GAGAAAGAAAAAAAGAAAGAAAGAAAGAAAGAAAGAA G 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,7:9:0,2,3,4:4 @@ -323,20 +323,20 @@ chr18 9923253 chr18-9923254-DEL-95;pbsv.DEL.178 TTTTTAAGGAAATGATTAGATTGAATTACCGT chr18 9967006 pbsv.DEL.179 ATGTTTATGTATAAATTTCCTAT A 2 PASS SVTYPE=DEL;SVLEN=-22;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,2,0:4 chr18 9999598 pbsv.INS.180 T TAAATGTAAAGAGATTAATTACTTG 2 PASS SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:0,3,1,4:4 chr18 10150618 pbsv.DEL.181 ACAGCATCCACGTGGAAGCACGTTATGTGTGTG A 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,2:9:3,4,0,2:4 -chr18 10150676 chr18-10150677-INS-124 G GTGTGCTTCATTCACGTGGAAGCGTGTTCTGTGTGCTGCATCCATGTGGAAGCCTGTTCTGTGTGTGCTGCATCCACGTGGAAGCATGTTCTGTGTGTGCTGCATCCACGTGGAAGCGTGTTCTC 4 . ID=chr18-10150677-INS-124;SVTYPE=INS;SVLEN=124;TIG_REGION=h1tg004272l:152090-152213,h2tg010415l:70598-70721;QUERY_STRAND=+,+;HOM_REF=0,4;HOM_TIG=0,4;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=94.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:5,4:9:2:7:.:2,3,1,3:7 +chr18 10150676 chr18-10150677-INS-124 G GTGTGCTTCATTCACGTGGAAGCGTGTTCTGTGTGCTGCATCCATGTGGAAGCCTGTTCTGTGTGTGCTGCATCCACGTGGAAGCATGTTCTGTGTGTGCTGCATCCACGTGGAAGCGTGTTCTC 4 . ID=chr18-10150677-INS-124;SVTYPE=INS;SVLEN=124;TIG_REGION=h1tg004272l:152090-152213,h2tg010415l:70598-70721;QUERY_STRAND=+,+;HOM_REF=0,4;HOM_TIG=0,4;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=94.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:5,4:9:2:7:.:2,3,1,3:7 chr18 10151018 chr18-10151019-INS-130 T TTCTCTGTGTGCTGCATCCACGTGGAAGCGTGTTCTCTGTGTGCTGCATCCATGTGGAAGCATGTTCTGCGTGTGCTGCATCCACGTGGAAGCGTGTTCTCTGTGTGCTGCATCCACGTGGAAGCATGTTC 4 . ID=chr18-10151019-INS-130;SVTYPE=INS;SVLEN=130;TIG_REGION=h1tg004272l:152558-152687;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;AC=1 GT:SUPP 1/0:1 chr18 10151018 pbsv.INS.183 T TTCTGCGTGTGCTGCATCCACGTGGAAGCGTGTTCTGCGTGTGCTGCATCCATGTGGAAGCGTGTTCTGTGTGCTGCATCCATGTGGAAGCATGTTCTGCGTGTGCTGCATCCACGTGGAAGCGTGTTCTCTGTGTGCTGCATCCACGTGGAAGCGTGTTCTCTGTGTGCTGCATCCATGTGGAAGCATGTTCTGCGTGTGCTGCATCCACGTGGAAGCGTGTTCTCTGTGTGCTGCATCCACGTGGAAGCATGTTC 2 PASS SVTYPE=INS;SVLEN=256;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,4:9:1,4,2,2:4 chr18 10151019 Sniffles2.INS.47S11 T TCTGCGTGTGCTGCATCCACGTGGAAGCGTGTTCTCTGTGTGCTGCATCCACGTGGAAGCATGTTC 3 GT IMPRECISE;SVTYPE=INS;SVLEN=66;SUPPORT=2;COVERAGE=9,8,8,8,8;STRAND=+-;AF=0.25;STDEV_LEN=1.414;STDEV_POS=113.844;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:3:6:2:2 chr18 10160035 pbsv.INS.184 T TAAGGCCGTGATGGTAGGGACAGTG 2 PASS SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:5,3,0,1:4 -chr18 10222281 chr18-10222282-DEL-1326;pbsv.DEL.185 TAATGCTGTATCTGTGTTTGAGACCAGAGACACTAACATGGGTTAAATTGTGAAAGTGTCTAGCATTAGATATTGCAGTAGCAACTAGGCAATCAGCCATTTGATTCCCTGCAGTCAAAGGTCCTGGAAGAGGTGTATGAGCCCTAATGTGAGTGATGTAAAAAGGTTGCATTCTACTCCTGACTGCTGTTCGCAATTGGGTAAATAAAGTCATCTGTTGTTCATCTGTGTGAAATCATAACTGAGCATTTTCAATTAATTGTTTGGAATGAACCATGTAAGAAAAATCAGAAATCACATTAATAGGCATTTTAAAAGCAGTCAGTACCTCAGTTACAGCTACAAGCTCCACTTTTTGAGCTGAAGTATAGCGTGTCTGAAAAACTTTACATTTCGACACAGAATAAGAAGCTTTACCATTACTAGACCCATCTGTGAAGACATTTTCGGCACCTTCAGTTGGTTTAAATTTAGTTATTTTAGGGAGAATCCAATTAGTTAATTTCAAAAATTGAAACAGTTTCGTTTTAGGAAAATGATTATCGAGAATATCCACAAAGTCAGCTAAATGGGTTTGCCAAGTAAGACTATTTATAAAAGCTTCCTGTATTTGTGCCTTCGTGAGAAGGACAATAATTTTTCCAGGATCATATCCATGTAATTCAACAATCTGAGTTCTCCCATTTCCTATCATAGTAGCGATTTGATCCAAATAAGGAGTTAGAGTCCATGAATTAGTATGTGGAAGAACAAGCCACTCTACAAGATCTTGATCTTGAACAATAACAGCAGTAGATGAATGCTAAGTTGGAAAAGTTGGCAAATCTAGAATCTTCTCTGGATCTATTCTATTTATTTGAGCTTTATGGACTTGCTTTTCGATTAGCTGCAGCTCTGCCTCAGCTTCTTTTGTTAATTGCCGAGGGCTAGTGAAACTAGGATCTCCTCTGAGGATGGAAAATAGATTACTCATGGCATAGGTAGGAATGCCTAGGGCAGGTCATATCCAATTAATGTCCCCTAGTAATTTTTGAAAGTCATTTAATGTTTTCAGTTGATCCCTACATATGGTTACTTTCTGTGGCACAATGGTAGTGTCATTTACTAAGGTCCCCAAATAGGAGTAAGGAGTAGTAGTCTGAATTTTTTCAGGAGCTGTAATTAAACCAGCACGAGAAATCGAGTTTTGCAAGTGATCATAACACTGGAGTAATATTTCTTGAGTGGGGGCAGCACAAAGTATATCATCCATATAATGAATAATGTAACACTGTGAAAATTTTTTACAAGTAGGTTCAATTGTTTGTCCTACCTACATAAGTCTGGC T 4 PASS ID=chr18-10222282-DEL-1326;SVTYPE=DEL;SVLEN=-1326;TIG_REGION=h1tg004272l:223994-223994;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=95.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:3:11:7 +chr18 10222281 chr18-10222282-DEL-1326;pbsv.DEL.185 TAATGCTGTATCTGTGTTTGAGACCAGAGACACTAACATGGGTTAAATTGTGAAAGTGTCTAGCATTAGATATTGCAGTAGCAACTAGGCAATCAGCCATTTGATTCCCTGCAGTCAAAGGTCCTGGAAGAGGTGTATGAGCCCTAATGTGAGTGATGTAAAAAGGTTGCATTCTACTCCTGACTGCTGTTCGCAATTGGGTAAATAAAGTCATCTGTTGTTCATCTGTGTGAAATCATAACTGAGCATTTTCAATTAATTGTTTGGAATGAACCATGTAAGAAAAATCAGAAATCACATTAATAGGCATTTTAAAAGCAGTCAGTACCTCAGTTACAGCTACAAGCTCCACTTTTTGAGCTGAAGTATAGCGTGTCTGAAAAACTTTACATTTCGACACAGAATAAGAAGCTTTACCATTACTAGACCCATCTGTGAAGACATTTTCGGCACCTTCAGTTGGTTTAAATTTAGTTATTTTAGGGAGAATCCAATTAGTTAATTTCAAAAATTGAAACAGTTTCGTTTTAGGAAAATGATTATCGAGAATATCCACAAAGTCAGCTAAATGGGTTTGCCAAGTAAGACTATTTATAAAAGCTTCCTGTATTTGTGCCTTCGTGAGAAGGACAATAATTTTTCCAGGATCATATCCATGTAATTCAACAATCTGAGTTCTCCCATTTCCTATCATAGTAGCGATTTGATCCAAATAAGGAGTTAGAGTCCATGAATTAGTATGTGGAAGAACAAGCCACTCTACAAGATCTTGATCTTGAACAATAACAGCAGTAGATGAATGCTAAGTTGGAAAAGTTGGCAAATCTAGAATCTTCTCTGGATCTATTCTATTTATTTGAGCTTTATGGACTTGCTTTTCGATTAGCTGCAGCTCTGCCTCAGCTTCTTTTGTTAATTGCCGAGGGCTAGTGAAACTAGGATCTCCTCTGAGGATGGAAAATAGATTACTCATGGCATAGGTAGGAATGCCTAGGGCAGGTCATATCCAATTAATGTCCCCTAGTAATTTTTGAAAGTCATTTAATGTTTTCAGTTGATCCCTACATATGGTTACTTTCTGTGGCACAATGGTAGTGTCATTTACTAAGGTCCCCAAATAGGAGTAAGGAGTAGTAGTCTGAATTTTTTCAGGAGCTGTAATTAAACCAGCACGAGAAATCGAGTTTTGCAAGTGATCATAACACTGGAGTAATATTTCTTGAGTGGGGGCAGCACAAAGTATATCATCCATATAATGAATAATGTAACACTGTGAAAATTTTTTACAAGTAGGTTCAATTGTTTGTCCTACCTACATAAGTCTGGC T 4 PASS ID=chr18-10222282-DEL-1326;SVTYPE=DEL;SVLEN=-1326;TIG_REGION=h1tg004272l:223994-223994;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=95.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:3:11:7 chr18 10364160 pbsv.DEL.186 GTCTCTCTCTCTCTCTCTCTC G 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,6:11:3,2,3,3:4 chr18 10364206 pbsv.INS.187 C CTCTCTCTCTCTATATATATATATATA 2 PASS SVTYPE=INS;SVLEN=26;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,5:11:3,3,3,2:4 -chr18 10414492 chr18-10414493-INS-65 G GGCGGCTTCTGCTGGTACTCGCCCACCACGCCCACCAGAGCCACCGCACTTCCGGTTGCTGTCCAC 4 . ID=chr18-10414493-INS-65;SVTYPE=INS;SVLEN=65;TIG_REGION=h2tg018960l:66577-66641;QUERY_STRAND=-;HOM_REF=0,64;HOM_TIG=0,101;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=96.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,4:4:.:4:11:0,0,2,2:7 +chr18 10414492 chr18-10414493-INS-65 G GGCGGCTTCTGCTGGTACTCGCCCACCACGCCCACCAGAGCCACCGCACTTCCGGTTGCTGTCCAC 4 . ID=chr18-10414493-INS-65;SVTYPE=INS;SVLEN=65;TIG_REGION=h2tg018960l:66577-66641;QUERY_STRAND=-;HOM_REF=0,64;HOM_TIG=0,101;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=96.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,4:4:.:4:11:0,0,2,2:7 chr18 10426906 pbsv.DEL.189 ATTAGACAGCAGAAACCCTAC A 2 PASS SVTYPE=DEL;SVLEN=-20;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:0,5,1,2:4 chr18 10462412 chr18-10462413-DEL-231 TTCCTTCCTTCCTTTCCCCCTTGCTCCCTCTCTCCTTTCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCTGTGACCCTCCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTGTGACCCTCCCTTCCTCCCTTCCTTCCTTCCTGTGACCCTCCCTTCCTTCCTTCCTTCCTTCCCTCCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCCTCCC T 4 . ID=chr18-10462413-DEL-231;SVTYPE=DEL;SVLEN=-231;TIG_REGION=h1tg024932l:1056-1056,h2tg018960l:18638-18638;QUERY_STRAND=-,-;HOM_REF=0,13;HOM_TIG=0,13;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=97.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,2,3:7 chr18 10604296 pbsv.DEL.191 ACCTGAGAGTGCAGACAGGAGGGGCCCACCCCCAACCCCCG A 2 PASS SVTYPE=DEL;SVLEN=-40;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:3,1,2,0:4 chr18 10607526 pbsv.DEL.192 AGGGGCTTGGGGCGGAGCGCGAT A 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:4,0,3,0:4 -chr18 10607526 chr18-10607527-DEL-88 AGGGGCTTGGGGCGGAGCGCGATGGGGCTTGGGGCGGAGCGCGATGGGGCTTGGGGCGGAGCGCGATGGGGCTTGGGGCGGAGCGCGAT A 4 . ID=chr18-10607527-DEL-88;SVTYPE=DEL;SVLEN=-88;TIG_REGION=h1tg000920l:58881-58881;QUERY_STRAND=-;HOM_REF=0,69;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=98.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,4:7:2:4:8:3,0,4,0:7 +chr18 10607526 chr18-10607527-DEL-88 AGGGGCTTGGGGCGGAGCGCGATGGGGCTTGGGGCGGAGCGCGATGGGGCTTGGGGCGGAGCGCGATGGGGCTTGGGGCGGAGCGCGAT A 4 . ID=chr18-10607527-DEL-88;SVTYPE=DEL;SVLEN=-88;TIG_REGION=h1tg000920l:58881-58881;QUERY_STRAND=-;HOM_REF=0,69;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=98.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:3,4:7:2:4:8:3,0,4,0:7 chr18 10609938 pbsv.INS.DUP.194 C CACACACACACACGCGCGC 0 PASS SVTYPE=INS;SVLEN=18;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,7:8:1,0,7,0:4 chr18 10682775 pbsv.INS.195 T TTGTATCATGTTGTTCGACACC 2 PASS SVTYPE=INS;SVLEN=21;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,4:9:3,2,1,3:4 chr18 10691782 pbsv.INS.196 C CACACACACACACACATATATATATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=40;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,7:15:3,5,3,4:4 @@ -351,21 +351,21 @@ chr18 10795328 pbsv.DEL.204 TTTATTTTATTTTATTTTATTTTA T 2 PASS SVTYPE=DEL;SVLEN=- chr18 10886384 pbsv.INS.205 A ATATATATACACACACATATATATGTGTGTGTGTGTGTGTGTG 2 PASS SVTYPE=INS;SVLEN=42;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:2,8:10:2,0,4,4:4 chr18 10886487 chr18-10886488-INS-54 C CATATATATATATATATGTATATATATATATATATATATATATGTATATATATAT 4 . ID=chr18-10886488-INS-54;SVTYPE=INS;SVLEN=54;TIG_REGION=h1tg006290l:74347-74400,h2tg006064l:74347-74400;QUERY_STRAND=+,+;HOM_REF=0,11;HOM_TIG=0,12;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=100.0 GT:AD:DP:SAC:SUPP 1/1:2,8:10:2,0,4,4:5 chr18 10886488 Sniffles2.INS.4BS11 A ATATATATATATATATGTATATATATATAATATATATATATAAGTATATATATAA 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=71;SUPPORT=6;COVERAGE=10,8,7,7,7;STRAND=+-;AF=0.857;STDEV_LEN=8.347;STDEV_POS=59.5;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:6:1:6:2 -chr18 10911127 chr18-10911128-INS-322;pbsv.INS.207 G GAAGAAATTACTGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4 PASS ID=chr18-10911128-INS-322;SVTYPE=INS;SVLEN=322;TIG_REGION=h1tg005045l:302929-303250;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=101.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:6:23:7 +chr18 10911127 chr18-10911128-INS-322;pbsv.INS.207 G GAAGAAATTACTGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4 PASS ID=chr18-10911128-INS-322;SVTYPE=INS;SVLEN=322;TIG_REGION=h1tg005045l:302929-303250;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=101.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:6:23:7 chr18 10915927 pbsv.DEL.208 ACACAGAGTGCTGATTGGTGCATTTACAAACCTTGAGCTAGT A 2 PASS SVTYPE=DEL;SVLEN=-41;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,13:13:0,0,5,8:4 chr18 10944488 pbsv.DEL.209 CATATATATATATATATATCTTAGTAACAGATATAT C 2 PASS SVTYPE=DEL;SVLEN=-35;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,6,2:4 chr18 10956917 pbsv.INS.210 C CCCCCCCCCCCCCCCCCCCCCCCCCCC 2 PASS SVTYPE=INS;SVLEN=26;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:3,2,0,1:4 -chr18 11014986 chr18-11014987-DEL-170;pbsv.DEL.211 GCCCCCTCATTCCTCAGTGTGGGGAAGATGTCACCCTGGGCGGGACAGCGATCCATGACCCCCTCATTCCTCAGTGTGGGGAAGATGTCACCCTGGGCGGGACAGCGATCCGGGGCCCCCCTCATTCCTCAGCGGGGAACATGTCACCCTGGGTGAGACAGCGATCCATGA G 4 PASS ID=chr18-11014987-DEL-170;SVTYPE=DEL;SVLEN=-170;TIG_REGION=h1tg005045l:199142-199142;QUERY_STRAND=-;HOM_REF=0,40;HOM_TIG=0,40;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=102.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:6:3:13:7 -chr18 11509264 chr18-11509265-INS-184;pbsv.INS.212 A AGAAATTATTTGACATGTATATTTTTCCAAGTCAGTTCATATAAATCTACTGTGTATATGTATATGCTAAAAGTTACTAAGTCTCATACTTTTGATGAATCTGCAGGTTAATTTTGAGAAGGGTACATTATAAATAACAAACATTTAGATCATAGAGATCATCTATTTCTCTTTCTATAAATGAG 4 PASS ID=chr18-11509265-INS-184;SVTYPE=INS;SVLEN=184;TIG_REGION=h1tg005355l:239867-240050;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=103.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:8:5:27:7 -chr18 11509706 chr18-11509707-DEL-1769;pbsv.DEL.213 GAGTTTGAGACCAATCTGGGCAACATAGTGAGACCCTGTCTCTACAAAAAAAAAAAAAAGAAAAATTTTAATTAGCCAGGCATGTTGGCACATGCCTGTAGGCCAAGCTACTCTGGAGGCTGAGGTGGGAGGATAGATGGAGCCTGGGAGGTTGAGGCTACAGTGAGCCAAGATTTCACCACTGCACTCCAGCCTGGACAACAGAGTGAGACCTGTCTCAAAAAAGAAATAAAAGAAAAGAGCTTGGCAATTTCTTAGAAGTGTTAAACTCGTAGCTACTGTATCACACAATCGTTTCATTCCTAGGCTTCATCCAGGACAAACAAAGCACATGTCCACACAAAGACATGTACGCAAATATTCATAGCAGCTTTGTTTAGAACAGCTGAAAACTAGGAACAATCTACATGTCCATCAAAAGGTTAATAGATAATGAAATTCTACTCAGCAATAAAAAAGAATAAACTATTATTGAAACACTCAATGAGAGGGTTGAAACTCAAAATAATTATGCTGAGTGAAAGAAGCCATATCCCTCCCAAAAAAGTACGTCTCATAAGATTTCATTTATATTAGTATCTAGAAAATTCCTGCTGCTATATAGTGACAAGAAGCACATCAACGGTTGCTGTGGGGGGGAGACAGGGAGATAAGTGAGATGGGTTACCAAGGGGGATGAGGAAACTACTGAGAGTGGTGGAAATGTTCCTTATCTTGATTGTGGTGACTGCTTCTTGAGTGTACACATTTGTCAAAAGAGTTCACTTCAAATCCGTGTATTTTGTATGTCAATACACCTCAAGTTATTTTAAGTCACCTTATCAATGAGGGCTTCTCTGAATAACCCCCTCACTTAAAATTACAATATTGCCCACCTACCCCACCTATCTCTTCCTTAATTTTTCTCCATGGATTTTATCACTTTCCAATATAACGTATGTTATTTACTTGTTTTGTTTATATCTGCCTCCTGCCCATGCCACTGAACTGTGAGCTTCCTGAGGGTAGAGGTTGTTTTCTGTTTTCTTGCGTGATGTGTCCCTAGCAACTAGAATAGAACCTCAGTGAAGGAGTGAATGATGAAGGCTTCTTTGCCTCTCTAGCCTCCCACGAGCTCTCTCAGATCCTTTTATTTATTTATTTATTTATTTATTTATTTATTTTGAGACGGAGTCTTGCTCTGTGGCCCAGGCTGGAGTGCAGTGGCGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCTGCCTGCCTTGGCCTCCCAAAGTACTGGGATTACAGGTGTGAGCCACCACGCCCGGCCCAGATCCTTGTGTTTTTTGTAACACAGATTGAGTTCTCATGCCTAAACACATAAGGTAATAGAAAGCAGGAAATATACGTGTATTCTGTTGATGATTCTCTATTAATTATGGGAGTCATTCAGCCTTTCTGGGTTTCAATTTCCTCATTTATAGAAAGAGAAATAGATGATCTCTATGGTCTAAATGTTTGTTATTTATAATGTACCCTTCTCAAAATTAACCTGCAGATTCATCAAAAGTATGAGACTTAGTAACTTTTAGCATATACATATACACAGTAGATTTATATGAACTGACTTGGAAAAATATACATGTCAAAACTTA G 4 PASS ID=chr18-11509707-DEL-1769;SVTYPE=DEL;SVLEN=-1769;TIG_REGION=h1tg005355l:239425-239425;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=103.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:9:5:24:7 +chr18 11014986 chr18-11014987-DEL-170;pbsv.DEL.211 GCCCCCTCATTCCTCAGTGTGGGGAAGATGTCACCCTGGGCGGGACAGCGATCCATGACCCCCTCATTCCTCAGTGTGGGGAAGATGTCACCCTGGGCGGGACAGCGATCCGGGGCCCCCCTCATTCCTCAGCGGGGAACATGTCACCCTGGGTGAGACAGCGATCCATGA G 4 PASS ID=chr18-11014987-DEL-170;SVTYPE=DEL;SVLEN=-170;TIG_REGION=h1tg005045l:199142-199142;QUERY_STRAND=-;HOM_REF=0,40;HOM_TIG=0,40;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=102.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:6:3:13:7 +chr18 11509264 chr18-11509265-INS-184;pbsv.INS.212 A AGAAATTATTTGACATGTATATTTTTCCAAGTCAGTTCATATAAATCTACTGTGTATATGTATATGCTAAAAGTTACTAAGTCTCATACTTTTGATGAATCTGCAGGTTAATTTTGAGAAGGGTACATTATAAATAACAAACATTTAGATCATAGAGATCATCTATTTCTCTTTCTATAAATGAG 4 PASS ID=chr18-11509265-INS-184;SVTYPE=INS;SVLEN=184;TIG_REGION=h1tg005355l:239867-240050;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=103.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:8:5:27:7 +chr18 11509706 chr18-11509707-DEL-1769;pbsv.DEL.213 GAGTTTGAGACCAATCTGGGCAACATAGTGAGACCCTGTCTCTACAAAAAAAAAAAAAAGAAAAATTTTAATTAGCCAGGCATGTTGGCACATGCCTGTAGGCCAAGCTACTCTGGAGGCTGAGGTGGGAGGATAGATGGAGCCTGGGAGGTTGAGGCTACAGTGAGCCAAGATTTCACCACTGCACTCCAGCCTGGACAACAGAGTGAGACCTGTCTCAAAAAAGAAATAAAAGAAAAGAGCTTGGCAATTTCTTAGAAGTGTTAAACTCGTAGCTACTGTATCACACAATCGTTTCATTCCTAGGCTTCATCCAGGACAAACAAAGCACATGTCCACACAAAGACATGTACGCAAATATTCATAGCAGCTTTGTTTAGAACAGCTGAAAACTAGGAACAATCTACATGTCCATCAAAAGGTTAATAGATAATGAAATTCTACTCAGCAATAAAAAAGAATAAACTATTATTGAAACACTCAATGAGAGGGTTGAAACTCAAAATAATTATGCTGAGTGAAAGAAGCCATATCCCTCCCAAAAAAGTACGTCTCATAAGATTTCATTTATATTAGTATCTAGAAAATTCCTGCTGCTATATAGTGACAAGAAGCACATCAACGGTTGCTGTGGGGGGGAGACAGGGAGATAAGTGAGATGGGTTACCAAGGGGGATGAGGAAACTACTGAGAGTGGTGGAAATGTTCCTTATCTTGATTGTGGTGACTGCTTCTTGAGTGTACACATTTGTCAAAAGAGTTCACTTCAAATCCGTGTATTTTGTATGTCAATACACCTCAAGTTATTTTAAGTCACCTTATCAATGAGGGCTTCTCTGAATAACCCCCTCACTTAAAATTACAATATTGCCCACCTACCCCACCTATCTCTTCCTTAATTTTTCTCCATGGATTTTATCACTTTCCAATATAACGTATGTTATTTACTTGTTTTGTTTATATCTGCCTCCTGCCCATGCCACTGAACTGTGAGCTTCCTGAGGGTAGAGGTTGTTTTCTGTTTTCTTGCGTGATGTGTCCCTAGCAACTAGAATAGAACCTCAGTGAAGGAGTGAATGATGAAGGCTTCTTTGCCTCTCTAGCCTCCCACGAGCTCTCTCAGATCCTTTTATTTATTTATTTATTTATTTATTTATTTATTTTGAGACGGAGTCTTGCTCTGTGGCCCAGGCTGGAGTGCAGTGGCGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCTGCCTGCCTTGGCCTCCCAAAGTACTGGGATTACAGGTGTGAGCCACCACGCCCGGCCCAGATCCTTGTGTTTTTTGTAACACAGATTGAGTTCTCATGCCTAAACACATAAGGTAATAGAAAGCAGGAAATATACGTGTATTCTGTTGATGATTCTCTATTAATTATGGGAGTCATTCAGCCTTTCTGGGTTTCAATTTCCTCATTTATAGAAAGAGAAATAGATGATCTCTATGGTCTAAATGTTTGTTATTTATAATGTACCCTTCTCAAAATTAACCTGCAGATTCATCAAAAGTATGAGACTTAGTAACTTTTAGCATATACATATACACAGTAGATTTATATGAACTGACTTGGAAAAATATACATGTCAAAACTTA G 4 PASS ID=chr18-11509707-DEL-1769;SVTYPE=DEL;SVLEN=-1769;TIG_REGION=h1tg005355l:239425-239425;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=103.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:9:5:24:7 chr18 11521505 pbsv.DEL.214 GGTGACCTCCCCTTCACACCCGTCACTGTGTACCA G 2 PASS SVTYPE=DEL;SVLEN=-34;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,7:11:2,2,5,2:4 -chr18 11572179 chr18-11572180-INS-51 T TCTGCTCACAGAGAAGGTGAAGAGCGGTTTAATGAATGAAGCCATCGCTGAG 4 . ID=chr18-11572180-INS-51;SVTYPE=INS;SVLEN=51;TIG_REGION=h1tg005355l:178728-178778;QUERY_STRAND=-;HOM_REF=0,52;HOM_TIG=0,52;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=104.0 GT:DR:DV:GQ:SUPP 0/1:3:3:21:3 +chr18 11572179 chr18-11572180-INS-51 T TCTGCTCACAGAGAAGGTGAAGAGCGGTTTAATGAATGAAGCCATCGCTGAG 4 . ID=chr18-11572180-INS-51;SVTYPE=INS;SVLEN=51;TIG_REGION=h1tg005355l:178728-178778;QUERY_STRAND=-;HOM_REF=0,52;HOM_TIG=0,52;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=104.0 GT:DR:DV:GQ:SUPP 1/0:3:3:21:3 chr18 11572180 pbsv.INS.DUP.216 C CTGCTCACAGAGAAGGTGAAGAGCGGTTTAATGAATGAAGCCATCGCTGA 0 PASS SVTYPE=INS;SVLEN=49;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:1,2,1,2:4 chr18 11572180 Sniffles2.INS.4FS11 C CTGCTCACAGAGAAGGTGAAGAGCGGTTTAATGAATGAAGCCATCGCTGAGCTGCTCACAGAGAAGGTGAAGAGCGGTTTAATGAATGAAGCCATCGCTGAG 3 PASS PRECISE;SVTYPE=INS;SVLEN=102;SUPPORT=3;COVERAGE=6,6,6,6,5;STRAND=+-;AF=0.5;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=104.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:3,3:6:1,2,1,2:6 -chr18 11581949 chr18-11581950-INS-103 A AGGGGAGGGGAGGGGAAGGGAGGGGAGGGGAGGTGGAGGGAGGGGAAGAGAGGGGAGGGGGAGGGGAGGGGGAGGGGGAGGGGGATGGGGAGGGGGAGGGGGAT 4 . ID=chr18-11581950-INS-103;SVTYPE=INS;SVLEN=103;TIG_REGION=h1tg005355l:168847-168949;QUERY_STRAND=-;HOM_REF=0,9;HOM_TIG=0,9;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=105.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,1,4:7 +chr18 11581949 chr18-11581950-INS-103 A AGGGGAGGGGAGGGGAAGGGAGGGGAGGGGAGGTGGAGGGAGGGGAAGAGAGGGGAGGGGGAGGGGAGGGGGAGGGGGAGGGGGATGGGGAGGGGGAGGGGGAT 4 . ID=chr18-11581950-INS-103;SVTYPE=INS;SVLEN=103;TIG_REGION=h1tg005355l:168847-168949;QUERY_STRAND=-;HOM_REF=0,9;HOM_TIG=0,9;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=105.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,5:5:.:5:13:0,0,1,4:7 chr18 11619524 pbsv.INS.218 C CCTCCACCTCTTGGGTTTCGGTGATTGTTCCACCTCATCCACA 2 PASS SVTYPE=INS;SVLEN=42;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 chr18 11626833 pbsv.DEL.219 GGCAGGAGAACTGCTTGAACCCAGGAGGCAGAGGTT G 2 PASS SVTYPE=DEL;SVLEN=-35;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,6,5:4 -chr18 11633410 chr18-11633411-INS-81;pbsv.INS.220 C CAGGGGGGAGGGAAGGGGACGGGGACCGGGGCTGGATCTGAGTTGGGGAGGGGGAGGGGAGGGGGAGGGGAAGGGGAGGGGA 4 PASS ID=chr18-11633411-INS-81;SVTYPE=INS;SVLEN=81;TIG_REGION=h1tg005355l:117296-117376;QUERY_STRAND=-;HOM_REF=0,8;HOM_TIG=0,8;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=106.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 +chr18 11633410 chr18-11633411-INS-81;pbsv.INS.220 C CAGGGGGGAGGGAAGGGGACGGGGACCGGGGCTGGATCTGAGTTGGGGAGGGGGAGGGGAGGGGGAGGGGAAGGGGAGGGGA 4 PASS ID=chr18-11633411-INS-81;SVTYPE=INS;SVLEN=81;TIG_REGION=h1tg005355l:117296-117376;QUERY_STRAND=-;HOM_REF=0,8;HOM_TIG=0,8;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=106.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:8:22:7 chr18 11647665 pbsv.DEL.221 CGCCTCTGCCCGGCCGCCACCCCGTCTGGGAGGTGAGGAGT C 2 PASS SVTYPE=DEL;SVLEN=-40;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,2,3:4 chr18 11804352 pbsv.DEL.222 ACGGAGATACTGTGTAGTGGTGAAGTACAGGTGCGGTTTGGATGGAAC A 2 PASS SVTYPE=DEL;SVLEN=-47;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:6,2,1,0:4 chr18 11804712 pbsv.DEL.223 GTACAGGAGCGGTTTGAGTGGGACACGGAGATACTGTGTAGTG G 2 PASS SVTYPE=DEL;SVLEN=-42;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:6,2,1,0:4 @@ -379,7 +379,7 @@ chr18 11959476 pbsv.DEL.229 CGTCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGGATGTG chr18 12030975 pbsv.DEL.230 TTGCGAATGAAACCCAAAGTCCA T 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,3,7:4 chr18 12062907 pbsv.INS.231 C CCGGGTGTCCCAGGAGCCCAGATTCCTCAC 2 PASS SVTYPE=INS;SVLEN=29;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,5:6:0,1,1,4:4 chr18 12086201 pbsv.INS.232 C CCTCCCTTTGCATCTTTGCATCTTTGCA 2 PASS SVTYPE=INS;SVLEN=27;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:1,0,3,1:4 -chr18 12094458 chr18-12094459-INS-98;pbsv.INS.233 A AGTGGAGTGAGGGTGGGTTGGGGTGGAGGACTGGTGGGGGGTGGGATGGGGTGGGGGACTGTGGTGGGGGTAGAGTTGGGTGGGGGACTGTATTAGGAG 4 PASS ID=chr18-12094459-INS-98;SVTYPE=INS;SVLEN=98;TIG_REGION=h1tg003649l:38025-38122;QUERY_STRAND=+;HOM_REF=0,7;HOM_TIG=0,7;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=111.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:4:8:7 +chr18 12094458 chr18-12094459-INS-98;pbsv.INS.233 A AGTGGAGTGAGGGTGGGTTGGGGTGGAGGACTGGTGGGGGGTGGGATGGGGTGGGGGACTGTGGTGGGGGTAGAGTTGGGTGGGGGACTGTATTAGGAG 4 PASS ID=chr18-12094459-INS-98;SVTYPE=INS;SVLEN=98;TIG_REGION=h1tg003649l:38025-38122;QUERY_STRAND=+;HOM_REF=0,7;HOM_TIG=0,7;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=111.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:4:8:7 chr18 12094530 Sniffles2.INS.55S11 G TGGGGGTAGAGTTGGGTGAGGGACTGTGGTGGGGAGTGGAGTGAGGGTGGGTTGGGGGTGGAGGACTGGTGGGGGGTGGGATGGGGGTGGGGGACTGTGGTGGGGGTAGAGTTGGGTGGGGGACTGTATTAGGAGGTGGAGTTGGGTGGGGGTTGGATGGGGTGGAGGACTGGTGGGGGGTGGGATGGGGTGGGGGACTGTGGTGGGGAGTGGCTGGGGGCGTTGGATGTTGGGGGGACTGTGGTGGGGGTAGAGTTGGGTGGGGGGACTGTGGTAGGAAGTGGAGTTGGGTGGGGGTTGGAAGGGGTGAATGGGGTGGAGGACTGGTGGGGGGTGGGATGGGGGTGGGGGACTGTGGTGGGGGTAGAGTTGGGTGGGGGACTGTATTAGGAGGTGGAGTTGGGTGGGGTTGGA 3 PASS PRECISE;SVTYPE=INS;SVLEN=414;SUPPORT=2;COVERAGE=5,6,6,6,6;STRAND=+;AF=0.333;STDEV_LEN=0;STDEV_POS=4.243;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=111.3 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:4,2:6:3,1,2,0:6 chr18 12094531 chr18-12094532-INS-308 G GGGTAGAGTTGGGTGAGGGACTGTGGTGGGGAGTGGAGTGAGGGTGGGTTGGGGTGGAGGACTGGTGGGGGGTGGGATGGGGGTGGGGGGACTGTGGTGGGGGTAGAGTTGGGTGGGGGACTGTATTAGGAGGTGGAGTTGGGTGGGGTTGGATGGGGTGGAGGACTGGTGGGGGGTGGGATGGGGTGGGGGACTGTGGTGGGGAGTGGCTGGGGGCGTTGGATGTTGGGGGACTGTGGTGGGGGTAGAGTTGGGTGGGGGACTGTGGTAGGAAGTGGAGTTGGGTGGGGGTTGGAAGGGGTGAAGGAC 4 . ID=chr18-12094532-INS-308;SVTYPE=INS;SVLEN=308;TIG_REGION=h2tg003468l:7096-7403;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 0/1:1 chr18 12094638 chr18-12094639-INS-105 T TGGGGGGTGGGATGGGGTGGGGGGACTGTGGTGGGGGTTAGAGTTGGGTGGGGGACTGTATTAGGAGGTGGAGTTGGGTGGGGTTGGATGGGGTGGAGGACTGGTG 4 . ID=chr18-12094639-INS-105;SVTYPE=INS;SVLEN=105;TIG_REGION=h2tg003468l:7509-7613;QUERY_STRAND=+;HOM_REF=0,22;HOM_TIG=0,22;AC=1 GT:SUPP 0/1:1 @@ -395,8 +395,8 @@ chr18 12177713 chr18-12177714-DEL-201 GGGAGCCAGACACTGGTAGGTGCTGGGGATATAGGCAGGAAT chr18 12186141 pbsv.INS.238 T TGCTCATGGGGGTACCCATGAGCTCCTA 2 PASS SVTYPE=INS;SVLEN=27;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,5:10:3,2,2,3:4 chr18 12215316 pbsv.INS.239 T TGTAGGTATTTCTGTAGGTATTTTGTAGGCTGCATTTGTA 2 PASS SVTYPE=INS;SVLEN=39;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,6:10:2,2,5,1:4 chr18 12227982 pbsv.INS.240 T TCCCATCGCGCTCCGCCCCAAGCCCCATCGCGCTCCGCCCCAAGC 2 PASS SVTYPE=INS;SVLEN=44;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,6:11:1,4,3,3:4 -chr18 12227982 chr18-12227983-DEL-66;pbsv.DEL.241 TCCCATCGCGCTCCGCCCCAAGCCCCATCGCGCTCCGCCCCAAGCCCCATCGCGCTCCGCCCCAAGC T 4 PASS ID=chr18-12227983-DEL-66;SVTYPE=DEL;SVLEN=-66;TIG_REGION=h1tg003649l:171527-171527;QUERY_STRAND=+;HOM_REF=0,25;HOM_TIG=0,25;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=114.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:6:5:33:7 -chr18 12231262 chr18-12231263-INS-80;pbsv.INS.242 G GTGGGCCCCTCCTGTCTGCACTCTCAGGTAGGGGTGGGGACTGGGCCCCTCCTGTCTGCACTCTCAGGTAGGGGTGGGGAC 4 PASS ID=chr18-12231263-INS-80;SVTYPE=INS;SVLEN=80;TIG_REGION=h2tg015716l:50834-50913;QUERY_STRAND=+;HOM_REF=0,68;HOM_TIG=0,68;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=115.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:6:7:40:7 +chr18 12227982 chr18-12227983-DEL-66;pbsv.DEL.241 TCCCATCGCGCTCCGCCCCAAGCCCCATCGCGCTCCGCCCCAAGCCCCATCGCGCTCCGCCCCAAGC T 4 PASS ID=chr18-12227983-DEL-66;SVTYPE=DEL;SVLEN=-66;TIG_REGION=h1tg003649l:171527-171527;QUERY_STRAND=+;HOM_REF=0,25;HOM_TIG=0,25;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=114.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:6:5:33:7 +chr18 12231262 chr18-12231263-INS-80;pbsv.INS.242 G GTGGGCCCCTCCTGTCTGCACTCTCAGGTAGGGGTGGGGACTGGGCCCCTCCTGTCTGCACTCTCAGGTAGGGGTGGGGAC 4 PASS ID=chr18-12231263-INS-80;SVTYPE=INS;SVLEN=80;TIG_REGION=h2tg015716l:50834-50913;QUERY_STRAND=+;HOM_REF=0,68;HOM_TIG=0,68;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=115.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:6:7:40:7 chr18 12298980 pbsv.INS.243 G GGAAGGAAGGAAGGAAGGAAAGAAGGAAA 2 PASS SVTYPE=INS;SVLEN=28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,1,2:4 chr18 12331808 pbsv.DEL.244 AATATATATATATATATATATATATATATATATAT A 2 PASS SVTYPE=DEL;SVLEN=-34;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 12332907 pbsv.INS.245 A AAATATATATTATATAACATATACTATATAATATAT 2 PASS SVTYPE=INS;SVLEN=35;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:3,1,1,1:4 @@ -415,9 +415,9 @@ chr18 12980268 chr18-12980269-DEL-274 TCGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGT chr18 12980282 pbsv.DEL.257 CGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACAGGGCGGCTGGCAGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGATCCCCCAACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCAGCTGGCCGGGCAGAGGGGCTCCTCTCTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCAGACAGGGTGGCTGGCA C 2 PASS SVTYPE=DEL;SVLEN=-401;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,4:6:1,1,0,4:4 chr18 12980714 chr18-12980715-DEL-127 CCCGGACGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACTTCCCTT C 4 . ID=chr18-12980715-DEL-127;SVTYPE=DEL;SVLEN=-127;TIG_REGION=h2tg005777l:146529-146529;QUERY_STRAND=-;HOM_REF=0,23;HOM_TIG=0,23;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=117.1 GT:DR:DV:GQ:SUPP 0/1:2:4:8:3 chr18 12980725 pbsv.INS.258 C CGGCTGGCCGGGCGGGGAGCTGACCTCCCCACCTCCCTCCCGGACGGGGT 2 PASS SVTYPE=INS;SVLEN=49;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:0,4,1,1:4 -chr18 13106403 chr18-13106404-DEL-80;pbsv.DEL.259 CACTCACCACTGCCATCACCATTTCCCACACAACCCTCAATTACAACCACACCCCACAGAACTACCACCACCACTACCACT C 4 PASS ID=chr18-13106404-DEL-80;SVTYPE=DEL;SVLEN=-80;TIG_REGION=h1tg013198l:26473-26473;QUERY_STRAND=-;HOM_REF=0,25;HOM_TIG=0,25;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=118.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:8:7:7 +chr18 13106403 chr18-13106404-DEL-80;pbsv.DEL.259 CACTCACCACTGCCATCACCATTTCCCACACAACCCTCAATTACAACCACACCCCACAGAACTACCACCACCACTACCACT C 4 PASS ID=chr18-13106404-DEL-80;SVTYPE=DEL;SVLEN=-80;TIG_REGION=h1tg013198l:26473-26473;QUERY_STRAND=-;HOM_REF=0,25;HOM_TIG=0,25;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=118.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:3:8:7:7 chr18 13142189 pbsv.INS.260 T TCTCTGCCAGGACATGAAGGAGCGG 2 PASS SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,8:14:2,4,3,5:4 -chr18 13152465 chr18-13152466-INS-96;pbsv.INS.261 A ACAGGTTTTTCACTGGCTACTCAAGCTTCCCAACATTTTACAGTGCCATCAGTGTATCCTGGATATACACTGTCACAGGAATTCGCAAATTTGACTC 4 PASS ID=chr18-13152466-INS-96;SVTYPE=INS;SVLEN=96;TIG_REGION=h1tg006989l:21536-21631;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=119.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:8:6:37:7 +chr18 13152465 chr18-13152466-INS-96;pbsv.INS.261 A ACAGGTTTTTCACTGGCTACTCAAGCTTCCCAACATTTTACAGTGCCATCAGTGTATCCTGGATATACACTGTCACAGGAATTCGCAAATTTGACTC 4 PASS ID=chr18-13152466-INS-96;SVTYPE=INS;SVLEN=96;TIG_REGION=h1tg006989l:21536-21631;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=119.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:8:6:37:7 chr18 13234427 pbsv.DEL.262 CCTGTCCTGGCCCAGCATCGGGCTGCCAGGA C 2 PASS SVTYPE=DEL;SVLEN=-30;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,2,5:4 chr18 13288610 chr18-13288611-INS-52 A AGTAGCAGCCCCACAGACCGTGGTCACTCTGCAAGGTGAGTCACGGGGCCATG 4 . ID=chr18-13288611-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h1tg006031l:59270-59321,h2tg005795l:59270-59321;QUERY_STRAND=-,-;HOM_REF=0,11;HOM_TIG=0,11;AC=2 GT:SUPP 1/1:1 chr18 13288775 pbsv.INS.263 C CCACAGACCGTGGTCACTCTGCAAGGTGAGTCACGGGGCCATGGTAGCAGCCCCGCAGACCGTGGTCACTCTGCAAGGTGAGTCACGGGGCCACGGTAGCAGCCC 2 PASS SVTYPE=INS;SVLEN=104;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 @@ -425,14 +425,14 @@ chr18 13288829 chr18-13288830-INS-52 A ACAGACCGTGGTCACTCTGCAAGGTGAGTCACGGGGCCACG chr18 13321861 pbsv.DEL.264 CAAAAAAAAAAAAAAAAAAAAAAAAA C 2 PASS SVTYPE=DEL;SVLEN=-25;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,7,5:4 chr18 13386891 pbsv.DEL.265 CATAGATAGATAGATAGATAGATAGATAGATAG C 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:1,0,4,0:4 chr18 13494662 chr18-13494663-INS-132 A AGTGAGACTCCATCTCCACTAAAATATATATATATATAAAATATTATATTTATATATTATATATATATATATATATAATATTATATTATATATATAATATATATATAATATTATATATATATAAAATTATATT 4 . ID=chr18-13494663-INS-132;SVTYPE=INS;SVLEN=132;TIG_REGION=h2tg001390l:138201-138332;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 0/1:1 -chr18 13494662 chr18-13494663-INS-165 A AGTGAGACTCCATCTCCACTAAAATTATATATATATAAAATATTATATTTATATATTATATATATAATATATATATAATATTATTTTATATATATTATATATATAATATTATATATATAAATATATATAATATAATATTATATATATTATATATATAAAATATATT 4 . ID=chr18-13494663-INS-165;SVTYPE=INS;SVLEN=165;TIG_REGION=h1tg018571l:13960-14124;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=121.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,6:6:.:6:16:0,0,2,4:7 +chr18 13494662 chr18-13494663-INS-165 A AGTGAGACTCCATCTCCACTAAAATTATATATATATAAAATATTATATTTATATATTATATATATAATATATATATAATATTATTTTATATATATTATATATATAATATTATATATATAAATATATATAATATAATATTATATATATTATATATATAAAATATATT 4 . ID=chr18-13494663-INS-165;SVTYPE=INS;SVLEN=165;TIG_REGION=h1tg018571l:13960-14124;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=121.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,6:6:.:6:16:0,0,2,4:7 chr18 13578827 pbsv.INS.267 C CTTTTTTTTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,2:7:3,2,1,1:4 chr18 13636521 pbsv.DEL.268 AATCTTGCTCTGTCGCCCAGGCTGGAGTGCAGCGGCGCG A 2 PASS SVTYPE=DEL;SVLEN=-38;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,2:3:0,1,1,1:4 chr18 13659833 pbsv.DEL.269 AAAAAAAATATATATATATATATAT A 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,4,5:4 chr18 13673909 pbsv.DEL.270 GCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGA G 2 PASS SVTYPE=DEL;SVLEN=-46;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,2:9:4,3,1,1:4 chr18 13674496 Sniffles2.INS.5DS11 C CTTCTTTATTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCAACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTT 3 PASS PRECISE;SVTYPE=INS;SVLEN=138;SUPPORT=4;COVERAGE=8,8,8,8,9;STRAND=+-;AF=0.5;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:28:4:4:2 chr18 13674678 Sniffles2.INS.5ES11 A TTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCAACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGACTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTATAATTCCTGAGCCCTGGCTTCTTT 3 PASS PRECISE;SVTYPE=INS;SVLEN=318;SUPPORT=4;COVERAGE=8,8,8,8,9;STRAND=+-;AF=0.5;STDEV_LEN=0.707;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:28:4:4:2 -chr18 13674762 chr18-13674763-INS-411 A ACTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCAACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGACTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTATAATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCAGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTT 4 . ID=chr18-13674763-INS-411;SVTYPE=INS;SVLEN=411;TIG_REGION=h1tg001845l:170180-170590,h2tg001710l:257369-257779;QUERY_STRAND=-,-;HOM_REF=0,3;HOM_TIG=0,3;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=122.0 GT:DR:DV:GQ:SUPP 0/1:6:2:3:3 +chr18 13674762 chr18-13674763-INS-411 A ACTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCAACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGACTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTATAATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCAGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTT 4 . ID=chr18-13674763-INS-411;SVTYPE=INS;SVLEN=411;TIG_REGION=h1tg001845l:170180-170590,h2tg001710l:257369-257779;QUERY_STRAND=-,-;HOM_REF=0,3;HOM_TIG=0,3;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=122.0 GT:DR:DV:GQ:SUPP 1/1:6:2:3:3 chr18 13674936 pbsv.INS.271 C CCTGGCTTCTTTATTTCCAGTTTCCTGACTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTATAATTCCTGAGCCCTGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCAGGCTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTTATTTCCTGTTTCCTGATTATTAAAATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTAGCTTCTTGATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGACTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGACTTCATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCTGGCTTCTTGATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGA 2 PASS SVTYPE=INS;SVLEN=544;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,7:10:2,1,4,3:4 chr18 13675404 chr18-13675405-INS-134 A AGTTTCCTGATTATTAACATTCCTGAGCCCCGACTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCGTGACTTCTTTATTTCCAGTTTCCTGATTATTAACATTCCTGAGCCCCGGCTTCTTTATTTCCT 4 . ID=chr18-13675405-INS-134;SVTYPE=INS;SVLEN=134;TIG_REGION=h1tg001845l:169410-169543,h2tg001710l:256599-256732;QUERY_STRAND=-,-;HOM_REF=0,29;HOM_TIG=0,29;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=122.1 GT:DR:DV:GQ:SUPP 1/1:1:7:9:3 chr18 13728319 pbsv.DEL.272 TTTTTTTTTTTTTGTGTGTGTGTGTG T 2 PASS SVTYPE=DEL;SVLEN=-25;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,2,3:4 @@ -440,7 +440,7 @@ chr18 13823328 chr18-13823329-INS-113;pbsv.INS.273 A ACCCACCCACCCACCGACCCAACCAAC chr18 13833363 pbsv.INS.274 C CGTGTGTGTGTGTGTGTGTGT 2 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,5,2:4 chr18 13880086 pbsv.DEL.275 AGGCCCCTCTGCAGTTCCTAGAGGTCTCTGCAGTCCCTAGG A 2 PASS SVTYPE=DEL;SVLEN=-40;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:2,1,1,0:4 chr18 13881101 pbsv.DEL.276 GCCCCAGCAGTTCCTAGAGGC G 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:3,1,1,0:4 -chr18 13887180 chr18-13887181-DEL-208;pbsv.DEL.277 GAAGCCTGTGTGCTGTGTCCCACCTGCTGGGGAAGCCTCGGGGATGGGAGGGGAAGCCTGTGTGCTGTGTCCCACCTGCTGGGGAAGCCTCAGGGATGGGAGGGGGCCTGTGTGCTGTGTCCCACCTGCTGGGAAAGCCTCAGGGATGGCAGGGGAAGCCTGTGTGCTGTGTCCCACCTGCTGGGGAAGCCTCGGGGATGGCAGGGGAA G 4 PASS ID=chr18-13887181-DEL-208;SVTYPE=DEL;SVLEN=-208;TIG_REGION=h1tg023342l:2677-2677;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=124.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:6:3:13:7 +chr18 13887180 chr18-13887181-DEL-208;pbsv.DEL.277 GAAGCCTGTGTGCTGTGTCCCACCTGCTGGGGAAGCCTCGGGGATGGGAGGGGAAGCCTGTGTGCTGTGTCCCACCTGCTGGGGAAGCCTCAGGGATGGGAGGGGGCCTGTGTGCTGTGTCCCACCTGCTGGGAAAGCCTCAGGGATGGCAGGGGAAGCCTGTGTGCTGTGTCCCACCTGCTGGGGAAGCCTCGGGGATGGCAGGGGAA G 4 PASS ID=chr18-13887181-DEL-208;SVTYPE=DEL;SVLEN=-208;TIG_REGION=h1tg023342l:2677-2677;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=124.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:6:3:13:7 chr18 13946517 pbsv.INS.278 T TCTTTCTTTCTCTTTCTTTCTTTCTTCCTCTTCTTTCTTTCTTCTTTC 2 PASS SVTYPE=INS;SVLEN=47;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,2:2:0,0,2,0:4 chr18 13982053 chr18-13982054-INS-544 T TTCCTATATTACTTAGTAAGAATTACACGTGCATTGGCTACAACACATGGAGCTTATTCTCTGAGAAAGCCTCATCAATGTGGTGACACATCCTTCATTTTAACAGCTACCATATGGCTAATTCCATTTGCTTTTTTTGTTTTGTTTTGTTTTTCTAGAGGAGAAAACTATCAGCTATATGGTGAATATTAGAGGACTTCAAGCCTATACAGAGAAATTTGACCTACAGGCTTCTGGCAGAACTGTCTCTGAGAGCAACAGATACCGGTTCCCCTGGAGGCCTCCTCTCTCTATCCACACTGCATGTGGAATCTAGTAGGATTTCTTTTTACTGCTCACTGTAATGTTATTCTGGGCTGTAAGAACTTTGTGCTTTGTATATCCTTCAGCTGCTGTGAGATTCAAAACACTTCTGCTGCTATGCTGAATGTTCTATTCAAAGCTAGCAACTGCAAGAAGTGGAGTAGACTATTAACCTGGTACCTTAGCAAAAGACTTAGTGTATATTCTTTGATTTTCCCTAGCTGGGGAGAAAGAAGCAAACC 4 . ID=chr18-13982054-INS-544;SVTYPE=INS;SVLEN=544;TIG_REGION=h1tg016351l:4515-5058,h2tg002833l:16918-17460;QUERY_STRAND=-,+;HOM_REF=0,4;HOM_TIG=0,4;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=125.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,3:3:.:3:8:0,0,0,3:7 chr18 14002159 pbsv.INS.280 C CAAAAAAAACTTAGGAATCCAGATCCACTCGAACGAATCCCCGTCGG 2 PASS SVTYPE=INS;SVLEN=46;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:3,3,0,1:4 @@ -452,25 +452,25 @@ chr18 14224960 pbsv.DEL.285 GCCTTTGCCCAGCCGCCCATAGTCTGGGAAGTGGGGAGCA G 2 PASS SV chr18 14295278 pbsv.DEL.286 ATCCTTCACCATTGGTTAATCT A 2 PASS SVTYPE=DEL;SVLEN=-21;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,2,5:4 chr18 14328156 pbsv.INS.287 T TCGGCACTCATTGTACTAGCTCTTC 2 PASS SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:3,4,1,0:4 chr18 14367132 pbsv.INS.288 C CTTTCTTTTTCTCTTTCTTTCTTTCTCTT 2 PASS SVTYPE=INS;SVLEN=28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:1,2,5,0:4 -chr18 14450642 chr18-14450643-DEL-9851;pbsv.DEL.289 TACACGGAACGCGCCCAGGGCCACCGGGAGGCGGCCGGCGCGGGTCAGAGCGTCCCCCAGCCTCAGGCACCGGCCGCGGTCGGGCTGCGCCAGCCGGGCCAGCATGGAGCGGAAGAGCCCGACTGCTTTCTGGTACTCGCTCGCGCGGAAGGCCTCGTCGCCCTCCTCCAAGCGCTGGGCGATTGGCTTCCCGCAGCAGCAGCCCGTCACTGGGGCGGCGGCGGGACCGGCTCAGTGCTGATCCCCGCGGGGCTGAGACCGTGCGGGCCTGGAGCGAAGGCGCGGAGCAGGGGCGATGAGCTGCTGCTGGGAACTGGCCGGCGGGAGCGCGGCCACAGCCTTCGCCTGCAGAACCAAAAAAACGGTTTTAAAAATCTTTTTAACATCTGCAGAACGTGAAGAATTACATTGCAAATTAGTTAGAGATTGTATTGGACCTATAGATTGATTTGAGTATGATGGTCATTTTAACAGTATTAACACTTCTAATTCAAAAAATGGGATAACCTTGTCTTTATTTGTATCTTTTCAATTGATTTTTATCAATGTTTTATAGTTTTCATTTTAGACGTCTTTATTTTGCCAGGCATTTTATTTTTTTATAGCTATTTTCAATGGGGATTCCTTTTTCAGATAGTATGCTGTTGGGTATAGAAATGCACCTGATTTTTCTATGCTGATTTTGTATTCTAAAACTTTACTGTATTCATTTACTATTTCTGTTTTTCAGTATAGGGTTTTTTATACATAAAATCATGTCATCTGCAAACAGGGACAATTTGACTTTCTTTTTGTTTTTCAATTTGGATGTCTTTTCTTTCTCTTTTCTAATTGCTCTAGCTAGGACTTCCAGTGCTATGTTGAAGAGAAGTTATTAAAGTGAACATCCTTGTCTTGTTCTAGATCTTAGAGAGACAGTTTTCAATTTTTCCTTATTCAGTATCATGTTGGCTGTGGGTTATCATATATGGCCTTTATTTTATTGAGTTATATTCTTTTTATAACTGATTTGTTAAGAGATCTTATGTTTACAAAAAACATTGAATTTTGTCAAATGCTTTTTCTGTATCTATTTAAATGATTATATGATTTTTATCTTACCTTATCGAATATGGTGTATCACATTTATTGATTTATATATCTTAAGCCCTCCTTGCCTCCCTGGAACAAATACAACCTGATTATGGTGAATCATCTTTTTAATGTGCTTTCAAATTATGATTGCTAGCATTGCTGGTTTTGAATTTTTGCATTTATGTTCATCACTGATATTGGCCTGTAGTTTAGTTTTTCACTGTTCTTGTCGCATTTTGGAATAAGGTAATTCTGTCTTCATAGAATGAGTATGGAAGAGTTTCCTCCTTTTCACTTTTTTGGGGAACAGTTTGTAAATAATTAGTATAAGTTCCTCTTTAAATGTTTTGAACAATTCAGCAGTATAAGCATTGGATCCTCAATTTTTATTTTCCTCTCCTTCCGTCCTTTCCTTCCTTCCTCCCTCCCTCTCTCTTTTCTTCCTTTTCCTTTCTTTCTTTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTTCTTCTTTCTTCTTAAATATTTTTGGTTTAGAGACAGGGCTTTCTCTGTCACTCAGGCTGGAGTACAGTGGTGCAATCATAGCTCACTGCAGCCTCAAATTCTTGGTCTTAAGTGATCCTCCTGCTCCAGCCTCCCAAGTTGTTAGGACTACAAGTGCACACCACTACACCTGGATAATTTTTATTTTTATTTTTGTAAAGACTGGGTCTCACTATGTTCCCCAGGTTTTCTTCTAGGTTTTCTAATTTATTGGCATATAATTTTAGTACTTTCTCATGATTCTTTATATTTCTGTAGTAACCATTTTAATGTCTTTTTTCATCTCTGATTTTATTTATGTGAATCTTCTCTCTTTTTTCTTAATCTGACTAAAGATATATCAATTGTGTTTATCTTTTCAAAAAATAACTTTTTATTTCATTGATCTTTCATATTTTTGTCTCCATTTGGTTTATTTGTGCTCTAGTCTTCATTATCTATATTCTTTTACCAATTTGGGGCTAAGTTTGTTCACGTTTTTATAATTCCTTGAAATGCATTCTTAAATTATTAATGAGAGTTTTCTTTTTTTCATATAGAAATTCATTTCTACAGACTTCCCTCTGAGGACTTTTTCTGCTGTATTTCATAAGTTTTTGTATGTTCTGATTTCATTTTCATTTGTCTTAAGAATTTTTAAAATGAAACAAAATTTATTTTTAACCCATTGTTTAGGGACACGTTGTTTAATTTGTATGTATTTGCACAATTTCTGAAGTTCTTGTTGTTTATTTCTAGTTTTATTCTATATTGTCAGAAAATATGTGATATAATTTTGATTTTTTTTTGAATTTGCTAAGGCTCATTTTGTGCCTAATATATGATCTATCATGGAAAATGTTCCATGCGCAGTAGAGAAGACTGTGAATTATGCAATTGTTGGATAACATGTTCTGTAAATGACTGCTAAGTTATTTGGTCTAGAGTTCAGTTTAAATATGATGTTTCTTTGTTGATTTTCTGTCTTGATAATCTGTTTATTGCTGAAAGTGGAATGTTAAGGTTTCTGACTATTATTTTATTGCTTGCTGTTTCTCCTGTTAGATCTATTAATGTTTGTTTTATATATTTAGGTGCTTCAATATAGAGGGCATATATATTTACAATTATATTATCTTGTGATATTGATCCCTTTATCATTATATGATGGCTGTATTTTTCTGTTTTTATAGGATTTTGCTTGAAGCGTATGTTATCTGATATAAATATATCTATACTGGCTTTCTTTCGGTTTCCATATTTATAAAATATATTTTTCCATCTGATCACTTTCAATTTATGTGTGTATTTACAGATGAAGTGAATTTCCTGTAGAAAGTTTATAGTTAGGTCTTGTTTTTAATCAGTGTAGCCATTATATGTCTTAAATGGGATAATCCATTTACATACAAGATAATTATTGATAGGCAAGGACTTGGTCCTGCCATATTATTACTTGTTTTCATTTTTTTTTAATTTGTACTTTGATTGATTGATTGATTTCACTGTCTTCCTTTGTGATTAAGTGATTTACTCTATCAGTGTGTTTCGGTTTCTTTTTTTTTTTTAATTTTTAGAGTATCTTTTAAAAGTTTTTGCTTTGTGGTTACCACAAGGCATGCAAAGAACATTTTATGGTTACAATAAGTTATTTTAAAGAGATAGCAACTTAATTTTGATTCAAAAAAGGGGGAAAAGAAACCACTCTACTCTTTAACTCCCTCACTCCCTCACATTTTACATTTTTGATGTCTTAATTTACATCTTTGTATATTGCGATTCCTTAACAAATTATTCTAATTATTATTATTTTATTTGTATTGAATTTTAACCTTCCTACTAAGGATATATAAGTGGTTTACATCCAATTATTACCATATTAGAGCATTCCAAATTTGTCTGAACCCTCACTTCTATCTGTGGGTTTATACCTTCAGATTTTTTGTGTTACATATTGCTGCTATTTCCTTTCAGTTCGAAGAACAATATTTAGCATTTCTTGTAAGGCTGGTTTGATTACAGTGAATTCCTTTGCTTTTTGTTTGTCTGAGAATGTTTCAATCTCTCCTTTATTTCTAAATGATAGCTATGCTGGATAGTTTATTCATGGTTGACAGTTTTTTTAATTCAGCACTTGAATCTATTATCCTACTCTCTCCTGGCCTGTAGTGTTTCTGCTGACAAGTCTGCTGCCAGGCATATTGGAATTCTCTTATGTGTTGTTTCCTTTTTCTTAGTCCTTTCAGGGTCTTCTCTTTGTCTTTGACCTTTGAGAGTTTAATTATAATATGTCTTTGGTTGTCTTATTCAGATTAAATATGATTGGGCACTTTGACCATCCTAAACATTTTAATCTTTCTCCAGATTTAAAAAGTTTTCTGTTATTTCTTTGAATAAACTATCTCTTTTGCATTCTTAGTTCCCCTTTAACACCAATGATATGTAGATTGGCTCTTTTGTTGGTGTCCCACAAATCTCATAAACTTTCTTTGTTTCTTTTCATTCTACTCTGACCATGTATTTTCAAAGAGCCTGTCTTTGAGCTCACTGTTTCTTTCTTCTGCTTGATCAGTTCTTCTGCTGATGCCTTCCATTGGATTTTCAAAGTGTCCATTGAACTTTGCTGCTCCAGGATTTACATGTGATTTTTCCCATTATTTTGATTTCTTTGTTGAATTTCTCTGGTACATTTCTGAATTGTGTCTCTGCTTTCTCAGTGTTCAGGCTCTTCTTAAAACAGCCATTTTGAATTCTTTGCCTGCCAGATCGTTCATCTGTATGTCTTTAAGTTCAGTTGCTGACACCTTGTTTTGTCCATTTGGAGAGGCAACTTTTCCTAAGCTATCATTATTATATGTAGATATACATCTGTGTACACATTAATGATTTAGATATTTATTTGAGTCTTCTCAGTTTGGTTGTGTTTGTGACTACTTTTAAGCGGGCTTATTAAGAAATTTTGAGCGGACTTATCATCGTATTCCATTTTAGCGTTAGAGAGAGCCCAAATCCCACGTTAGACGTAAGTCTTCCAATGGCTCCATCACTGATGCAACATTTGCTGGATGGGCCCATGGGTGATCCACAGGGAGCCCCTGGCTATGGGGGAGAACAAGTCAGGCCGTCAAGCCTGTAGAGTCTGTGTATTATGTTTCACATGGTGGCTGTTGCTGGCCCCACCTCCGCTTATGTCCTTAACATGCCTCAGGTGGTTCATCCCTTTTGGCACTCATGGTGCCCCCTGTGGGCTGATACAGGAGTGAGTCTACTGTGAAGGCACTCAGTATAGTGGAAAAAACAAATATCAACCTCCTGCTTTTTTTCAGTGTAAAAACTATAAGCTCTATGGGAGTTTCTGCAGATGGTACCATAATGGCCTGAGGGAGGAGTATCACAGTCACAGAGTATTGGTTCTCTCACTGCATAAGCCATGGTTTTACCCACCTTCACAGGCTAAAGGTGCTTCATAACCTTGTTCATGTATTGAGGTTCTGTTGGCTCTTGTAATGGTAATTTCACATGTGGGCAGTTGTTCATATTGATGTTTCTATAGGGGTATGATAGCTGGAGAGGTCTGCGCCACTGTCTTGCTCTGCCTTGATCATTTTTTTTTTTTAACAAGAATTTGTCTCCTCCTAGTTTTTCTTTTTCTCTTAACCGACCTAGGTTTAGCCTTTTAATCCTTCTCCCTCCTCTGCTTCTAATGTCATTGTTTCTTTGTATGCCTATCATATCTACATGCTACATGACCTTCAGCTGGTTATGTATAATATATAAGACTTAATATCCTATAAAATAGAGGTAATAATAGCATCTACTTGATAGGAAAGTTAAGAATATTAAATGACACCATTGATGTTAAATGGAAGTAACTTTCTGAAATGTATTAATGCGACATGATTCTTTGTTCTAGTCTTCACTTTATAGACTAGACTACTTTGTTTGAGTTTTCTCTTTTCAGTCAGAGAAAGCAATAAAATTGTAATAGTAAAAATTAAATAAAATTTAACTTAAAATTGTGTTCTGGTCTTCTTGTTGTTCAGCCATGGAAAGCAATAAAATTGTGATAGCAGAAATTAAAAGTGAGCAGAGACTTATTTAAAAATTGGTATTCTCCTTTTCGATGCCAAAATAAGAACTAGAAAGTTTTAATAAGGCAACAGTCTGAAGAAACAATTTATTGAAGAGAATATGGGTTTCTAAATCCTAACAAGTTTTTTTTACATATGTGAGTCAAGTTTGGCTGCCTTGAATCCTACTATGACTTTAATGGAAGTTCTAGTTAGGGTGGAAAGTGTCAAAGAAAACAATTGCACCAGACAAAGTTAAACACAAAAAAGCTGTTATTGAAGGCTATTGCAAAAGGACAAAGAGGCCAGAACTTAGTCTGAACTCAGCTCCACTGAAACAAACAGCAGTAGAGATTTTAAGAGCTGGGATGAGGGGGAGATCATAGACCCCTTGTCTTTGCTAGTTGTCTTTTTCCAAAGGAATATTAAACTATCTTTTATCTTTATGACAGAAGGTAATTTTACAAATTAGAACAATATGCCTACCAAAATTTGGCTCTTACTCTTTCATGGAATCTGGGAGATAATGGTGTTATCTTTCTTGAGGATTACATTTCAAAGGCATGGCTCTGAGGTCCTTGAAATGGACATTTCTGAAGTGTAAAACTGGCAAGTGGGCTCTTAAAAAATTTATTTATCAAAGAGGCAGAGAAAGAATTTACAATGATAACATTTCTAAAATATGCTAAAGAAAAAAAGAGGCCAGGAGCCAAGAATCAGAAATAATCCTGTCTAAAATTTTATCAAGCTGAGGGGATGGTTTTAGTCAAAGGTTTAGTGTAAGGGGAATTTCTATGAACAAGAGGAAGAGAAGAGCTTTTAACTACACAGGAAGAAGAAAGTTCCCAGGAGATGTGACTATGGCTCTGCCTGTGTCTCTGATCAGGTATTCAGCCCCAACATTCTCCTGGGACTCGCTCAAACAGATAGATAGGAAAAAATAGACAGTTAAAGATGAGAAAATATGCAGGCTGGTGTCTTACTTCTCTAGTGCACATAGTGTGTCCCAGGAATGACAGAGTGGCAGGACAGGGGGAAGTGCCTGAGAGATCAATTCCCTTACTCTCAGCTTGTGAGTGCTGTCTGAAAAGCCAGTCTCTCCAAGCTTGGTGGGAGGGGTACTCACAACTGGTTTGACAGGACCAGTGGAGGCCCCTGGTGGGACATGCTGGCCTCAGAATGTGAAGTCTTGGAGGCTAGAGGAAAATGGCAGTGGGTGACCAGAAACTTCATCAGTGGGTACCAATACATGCAAAATCAAAGAGAAGATGAGCCATGTCAGCAGATATCAGTGAAGAATGCCCAGAGAAGACTCCACTGACCATGCACAGCACAGATCAGCCTGTTCCAGAGGACAGTGCAAATGGCACGCTGCAGCAACAGAGGCGACTTCGACCCCGCCCACGCCGTCAGCAGCTCGGACCCTAGGGCCAGATACCACCACAGAGGCTAATTCCAGTGGTCGCCCCGCATCTCAGGAAGACGGGAACCTGCACTCAGCACCATCCCTGTGGCTGCACAGGGCCCAGGACCCGTAACCCGGCGCTCTGGGTGCGGGCCAAGAAAGAGCATAAAATAGGGTGGCATGTCGGTGAACTCGGTGACCCTCTGACAACCTGGGAGCAGCCCCAACAGCCTCAGTTGTGGGCTCAGCTGCAACTGCCACCTGCCGATGGCGCACGGGAGCAGCAGTGGCAACCCTTGACCCTGTCCCCGCCACCAGCAGCGTGGACAGCAGGGACAGATAGCGCCGCGGCGCCTAAGACCTTAGGCCACGCAGCTACAGGAGGACGTGAAACTGGCGCTGACTGCCCGCCAGAAGCTATGCAATCCCCAGCGCAGGCGAGCCCGCAGTCTGGGCGCGGGCCAAAGATCAGAGACTACGATGAAAGGACGGTGAACTTGGTGACCCTGAGTCTCGCAATGGGTTTAGCTTCAGCTGCCACCTGCAACCAACCCTGACCCTGCCCGCGTCACCAGCAGCAGTAACTCAGGGCCAGATGCCGCCTCAGCGGCTAATTCAGGTAATCGTCCTCCAGCTGCAGCAGGGCGGAAATCCGCTGCTCAGCCCCATCTCCGCGGCTGCACGGAGCCCAGCGCCCGCACAGAGCCCGGCGCCGGCACAACCCGCTCTGGGTAAGGGCAAAGGAAGAGCGGACCTAGGGTGGGAGGACCCTGCACTCCCTGACCCTCAGGCCGTCTGGGGCCAGCCTTGCCAGCCTCGGTCTAAAGCTCCGCTGCAGCTGCTACCTGCTCATGGCGCACAGCCGCTGCAAACCCGGACTCCGCCCGCCGACACCAGCGGCCTCGAAACCCTAGAGCCAGACTCCACCTAGTGGCCAAAATCAGGCAGTCGGCCCACAGCTGTAGAAGAGCGGGAACTTGCCCTTCAGCGGATTCCTGGAGGCTGCACAGTGCCCAGCGCCAGCCACCGGGTGATCTGGGCGCAGGCAAATGACCCTCAGGCCGTCTGGGACCGGACCAGCCCTGCAGCGTCAGCGGTGGGCTCAGGGGCGGCTGCCACGTGCACACGGTGAACTATAGCAGCTGTGGCAGCCCCCAACCCTGTGCAAGCCACCGGCAGTGCGGACCGCATGATCAAAAGCCGCCGCGGCGCCTAACTCAGGCTGCCGGCCCCCCAGCAGCCAGAGGGCGGAAACTTGCAGCTTAGCCCCATCTCCCAGCGCCTGCACTATGCTCAGCGCCTGCAATCCCACTCTCTGGGCGCGGGCAAGGAAGACTGGACCTTAGGGTTGGAGGGCGATGCATTCGGGGACCCTCAAGGCTTCTGGAATAAGCCCTTCCAGCCTCCGACGCGGGCTTAGCTGCAGCTGCCAGCTGCACACTCCTGGAAGCAGCAGCGGTGGCAGCTCTGGTCTCTGCCAGCTCCAGCAGCAGCGCGGACTGCAGAGCCAGAGGTCACTGCAGCGCCTGTTAGGAGGTTGGCCTCTCAGCTGCAGGAGGGCGGGAATCTGCGCCCAACCAGATCCTCATGGCTGCACAGTGTCCAACGCCCACGACCTTGCAATCTGGGCGCCGGCCTAGGAATAACGGACCCTGGGGTGGAAGGGCGGTGCACTCAGCCACCTTTAGACAGCCTCAGACCAGCCCTGACAGCATCTGCCTTGGGCTCAGCTGCAGCTGGCACCTGCGCATGGCGCACGGCAGTAGTAGTGGCAGTCCTGACCCTGCCCGCAGACACCAGCAGCAAAGACCCCAGGGCCAGATGCCTCCAAGGCATCTAAGTCAGGTGGTCCGTCCCATAGCTACAGGAGGGCGGGAATCGGCTGCTCAGCCCCATAGCAGCTGTGGCAGCCCCCATCTCTGTCTATGCCACCAGTAGCACATACCCCAGGGCCAGATACTGCGGTGGCGCCTAATTCAGACTGTAGCTGCAGCAGGGCAGGAATCTGCCGCTCAGCCCCATCCTGGAGGCTGCTCAGAGTCTAGCGCTCGTACACCGCGTCCTGGGAGCAGGTTAAGGAAGAGCAGACCCTAGGGTGGTAGGGCGACGCACCCAGACACCCTCAGGGTGTCTGGGACCAGCACTGCCAGTCTCTGCCACGCGCTCAGCTGCAGCTACCACCGCCAGGTGGCTCCCTGCAGCAGCGGTGGAACCCCCGCTGACCTTGCCCGCCGCCAACAGCAGTGAGGATTCCACGGCTGGATCCCTTGCCAGGGCGGGAAGCTGCCGCTCAGCCTATTCTGGGCAGCTGCACAGGGCCCAGCTCCTGAAACCCCGAGCTCTGAGCTCGGGCCAAGGAAGAGTAGACCCTAGGCTGGGAGGGCGGTGCACTCGGCGATCCTCACGCTTTCTAGGACCAACCCTGCCGGCGTCTACTGAGAACTCAGCTACAGCTGCCACCTGTACAAGGGCGCCGCAGCAGCAGAGCAACCGGGCACTTTGCCTGCACCACCAAGAGCCAGGACACTGGGGACAACGCCGCCTCAGCGCCTAATTCAGGCAGTCAGCCCCGCAGCTGCAGCAGGGCAGAAACCTATGCCCTCGGCGCAGTCCCCTTGGCTGCACAGTTCCCAGTGCCCGCGTCCCAGAACTCTGGGTGCAGGCAAAGGAAGAGC T 4 PASS ID=chr18-14450643-DEL-9851;SVTYPE=DEL;SVLEN=-9851;TIG_REGION=h1tg012520l:10494-10494,h2tg012120l:10494-10494;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=126.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:1:8:12:7 -chr18 14641276 chr18-14641277-INS-407 T TTCTCCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCC 4 . ID=chr18-14641277-INS-407;SVTYPE=INS;SVLEN=407;TIG_REGION=h1tg000102l:148838-149244;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,6;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=127.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,2:4:2:2:14:2,0,2,0:7 +chr18 14450642 chr18-14450643-DEL-9851;pbsv.DEL.289 TACACGGAACGCGCCCAGGGCCACCGGGAGGCGGCCGGCGCGGGTCAGAGCGTCCCCCAGCCTCAGGCACCGGCCGCGGTCGGGCTGCGCCAGCCGGGCCAGCATGGAGCGGAAGAGCCCGACTGCTTTCTGGTACTCGCTCGCGCGGAAGGCCTCGTCGCCCTCCTCCAAGCGCTGGGCGATTGGCTTCCCGCAGCAGCAGCCCGTCACTGGGGCGGCGGCGGGACCGGCTCAGTGCTGATCCCCGCGGGGCTGAGACCGTGCGGGCCTGGAGCGAAGGCGCGGAGCAGGGGCGATGAGCTGCTGCTGGGAACTGGCCGGCGGGAGCGCGGCCACAGCCTTCGCCTGCAGAACCAAAAAAACGGTTTTAAAAATCTTTTTAACATCTGCAGAACGTGAAGAATTACATTGCAAATTAGTTAGAGATTGTATTGGACCTATAGATTGATTTGAGTATGATGGTCATTTTAACAGTATTAACACTTCTAATTCAAAAAATGGGATAACCTTGTCTTTATTTGTATCTTTTCAATTGATTTTTATCAATGTTTTATAGTTTTCATTTTAGACGTCTTTATTTTGCCAGGCATTTTATTTTTTTATAGCTATTTTCAATGGGGATTCCTTTTTCAGATAGTATGCTGTTGGGTATAGAAATGCACCTGATTTTTCTATGCTGATTTTGTATTCTAAAACTTTACTGTATTCATTTACTATTTCTGTTTTTCAGTATAGGGTTTTTTATACATAAAATCATGTCATCTGCAAACAGGGACAATTTGACTTTCTTTTTGTTTTTCAATTTGGATGTCTTTTCTTTCTCTTTTCTAATTGCTCTAGCTAGGACTTCCAGTGCTATGTTGAAGAGAAGTTATTAAAGTGAACATCCTTGTCTTGTTCTAGATCTTAGAGAGACAGTTTTCAATTTTTCCTTATTCAGTATCATGTTGGCTGTGGGTTATCATATATGGCCTTTATTTTATTGAGTTATATTCTTTTTATAACTGATTTGTTAAGAGATCTTATGTTTACAAAAAACATTGAATTTTGTCAAATGCTTTTTCTGTATCTATTTAAATGATTATATGATTTTTATCTTACCTTATCGAATATGGTGTATCACATTTATTGATTTATATATCTTAAGCCCTCCTTGCCTCCCTGGAACAAATACAACCTGATTATGGTGAATCATCTTTTTAATGTGCTTTCAAATTATGATTGCTAGCATTGCTGGTTTTGAATTTTTGCATTTATGTTCATCACTGATATTGGCCTGTAGTTTAGTTTTTCACTGTTCTTGTCGCATTTTGGAATAAGGTAATTCTGTCTTCATAGAATGAGTATGGAAGAGTTTCCTCCTTTTCACTTTTTTGGGGAACAGTTTGTAAATAATTAGTATAAGTTCCTCTTTAAATGTTTTGAACAATTCAGCAGTATAAGCATTGGATCCTCAATTTTTATTTTCCTCTCCTTCCGTCCTTTCCTTCCTTCCTCCCTCCCTCTCTCTTTTCTTCCTTTTCCTTTCTTTCTTTGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCCTTCCTTCCTTCCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTTCTTCTTTCTTCTTAAATATTTTTGGTTTAGAGACAGGGCTTTCTCTGTCACTCAGGCTGGAGTACAGTGGTGCAATCATAGCTCACTGCAGCCTCAAATTCTTGGTCTTAAGTGATCCTCCTGCTCCAGCCTCCCAAGTTGTTAGGACTACAAGTGCACACCACTACACCTGGATAATTTTTATTTTTATTTTTGTAAAGACTGGGTCTCACTATGTTCCCCAGGTTTTCTTCTAGGTTTTCTAATTTATTGGCATATAATTTTAGTACTTTCTCATGATTCTTTATATTTCTGTAGTAACCATTTTAATGTCTTTTTTCATCTCTGATTTTATTTATGTGAATCTTCTCTCTTTTTTCTTAATCTGACTAAAGATATATCAATTGTGTTTATCTTTTCAAAAAATAACTTTTTATTTCATTGATCTTTCATATTTTTGTCTCCATTTGGTTTATTTGTGCTCTAGTCTTCATTATCTATATTCTTTTACCAATTTGGGGCTAAGTTTGTTCACGTTTTTATAATTCCTTGAAATGCATTCTTAAATTATTAATGAGAGTTTTCTTTTTTTCATATAGAAATTCATTTCTACAGACTTCCCTCTGAGGACTTTTTCTGCTGTATTTCATAAGTTTTTGTATGTTCTGATTTCATTTTCATTTGTCTTAAGAATTTTTAAAATGAAACAAAATTTATTTTTAACCCATTGTTTAGGGACACGTTGTTTAATTTGTATGTATTTGCACAATTTCTGAAGTTCTTGTTGTTTATTTCTAGTTTTATTCTATATTGTCAGAAAATATGTGATATAATTTTGATTTTTTTTTGAATTTGCTAAGGCTCATTTTGTGCCTAATATATGATCTATCATGGAAAATGTTCCATGCGCAGTAGAGAAGACTGTGAATTATGCAATTGTTGGATAACATGTTCTGTAAATGACTGCTAAGTTATTTGGTCTAGAGTTCAGTTTAAATATGATGTTTCTTTGTTGATTTTCTGTCTTGATAATCTGTTTATTGCTGAAAGTGGAATGTTAAGGTTTCTGACTATTATTTTATTGCTTGCTGTTTCTCCTGTTAGATCTATTAATGTTTGTTTTATATATTTAGGTGCTTCAATATAGAGGGCATATATATTTACAATTATATTATCTTGTGATATTGATCCCTTTATCATTATATGATGGCTGTATTTTTCTGTTTTTATAGGATTTTGCTTGAAGCGTATGTTATCTGATATAAATATATCTATACTGGCTTTCTTTCGGTTTCCATATTTATAAAATATATTTTTCCATCTGATCACTTTCAATTTATGTGTGTATTTACAGATGAAGTGAATTTCCTGTAGAAAGTTTATAGTTAGGTCTTGTTTTTAATCAGTGTAGCCATTATATGTCTTAAATGGGATAATCCATTTACATACAAGATAATTATTGATAGGCAAGGACTTGGTCCTGCCATATTATTACTTGTTTTCATTTTTTTTTAATTTGTACTTTGATTGATTGATTGATTTCACTGTCTTCCTTTGTGATTAAGTGATTTACTCTATCAGTGTGTTTCGGTTTCTTTTTTTTTTTTAATTTTTAGAGTATCTTTTAAAAGTTTTTGCTTTGTGGTTACCACAAGGCATGCAAAGAACATTTTATGGTTACAATAAGTTATTTTAAAGAGATAGCAACTTAATTTTGATTCAAAAAAGGGGGAAAAGAAACCACTCTACTCTTTAACTCCCTCACTCCCTCACATTTTACATTTTTGATGTCTTAATTTACATCTTTGTATATTGCGATTCCTTAACAAATTATTCTAATTATTATTATTTTATTTGTATTGAATTTTAACCTTCCTACTAAGGATATATAAGTGGTTTACATCCAATTATTACCATATTAGAGCATTCCAAATTTGTCTGAACCCTCACTTCTATCTGTGGGTTTATACCTTCAGATTTTTTGTGTTACATATTGCTGCTATTTCCTTTCAGTTCGAAGAACAATATTTAGCATTTCTTGTAAGGCTGGTTTGATTACAGTGAATTCCTTTGCTTTTTGTTTGTCTGAGAATGTTTCAATCTCTCCTTTATTTCTAAATGATAGCTATGCTGGATAGTTTATTCATGGTTGACAGTTTTTTTAATTCAGCACTTGAATCTATTATCCTACTCTCTCCTGGCCTGTAGTGTTTCTGCTGACAAGTCTGCTGCCAGGCATATTGGAATTCTCTTATGTGTTGTTTCCTTTTTCTTAGTCCTTTCAGGGTCTTCTCTTTGTCTTTGACCTTTGAGAGTTTAATTATAATATGTCTTTGGTTGTCTTATTCAGATTAAATATGATTGGGCACTTTGACCATCCTAAACATTTTAATCTTTCTCCAGATTTAAAAAGTTTTCTGTTATTTCTTTGAATAAACTATCTCTTTTGCATTCTTAGTTCCCCTTTAACACCAATGATATGTAGATTGGCTCTTTTGTTGGTGTCCCACAAATCTCATAAACTTTCTTTGTTTCTTTTCATTCTACTCTGACCATGTATTTTCAAAGAGCCTGTCTTTGAGCTCACTGTTTCTTTCTTCTGCTTGATCAGTTCTTCTGCTGATGCCTTCCATTGGATTTTCAAAGTGTCCATTGAACTTTGCTGCTCCAGGATTTACATGTGATTTTTCCCATTATTTTGATTTCTTTGTTGAATTTCTCTGGTACATTTCTGAATTGTGTCTCTGCTTTCTCAGTGTTCAGGCTCTTCTTAAAACAGCCATTTTGAATTCTTTGCCTGCCAGATCGTTCATCTGTATGTCTTTAAGTTCAGTTGCTGACACCTTGTTTTGTCCATTTGGAGAGGCAACTTTTCCTAAGCTATCATTATTATATGTAGATATACATCTGTGTACACATTAATGATTTAGATATTTATTTGAGTCTTCTCAGTTTGGTTGTGTTTGTGACTACTTTTAAGCGGGCTTATTAAGAAATTTTGAGCGGACTTATCATCGTATTCCATTTTAGCGTTAGAGAGAGCCCAAATCCCACGTTAGACGTAAGTCTTCCAATGGCTCCATCACTGATGCAACATTTGCTGGATGGGCCCATGGGTGATCCACAGGGAGCCCCTGGCTATGGGGGAGAACAAGTCAGGCCGTCAAGCCTGTAGAGTCTGTGTATTATGTTTCACATGGTGGCTGTTGCTGGCCCCACCTCCGCTTATGTCCTTAACATGCCTCAGGTGGTTCATCCCTTTTGGCACTCATGGTGCCCCCTGTGGGCTGATACAGGAGTGAGTCTACTGTGAAGGCACTCAGTATAGTGGAAAAAACAAATATCAACCTCCTGCTTTTTTTCAGTGTAAAAACTATAAGCTCTATGGGAGTTTCTGCAGATGGTACCATAATGGCCTGAGGGAGGAGTATCACAGTCACAGAGTATTGGTTCTCTCACTGCATAAGCCATGGTTTTACCCACCTTCACAGGCTAAAGGTGCTTCATAACCTTGTTCATGTATTGAGGTTCTGTTGGCTCTTGTAATGGTAATTTCACATGTGGGCAGTTGTTCATATTGATGTTTCTATAGGGGTATGATAGCTGGAGAGGTCTGCGCCACTGTCTTGCTCTGCCTTGATCATTTTTTTTTTTTAACAAGAATTTGTCTCCTCCTAGTTTTTCTTTTTCTCTTAACCGACCTAGGTTTAGCCTTTTAATCCTTCTCCCTCCTCTGCTTCTAATGTCATTGTTTCTTTGTATGCCTATCATATCTACATGCTACATGACCTTCAGCTGGTTATGTATAATATATAAGACTTAATATCCTATAAAATAGAGGTAATAATAGCATCTACTTGATAGGAAAGTTAAGAATATTAAATGACACCATTGATGTTAAATGGAAGTAACTTTCTGAAATGTATTAATGCGACATGATTCTTTGTTCTAGTCTTCACTTTATAGACTAGACTACTTTGTTTGAGTTTTCTCTTTTCAGTCAGAGAAAGCAATAAAATTGTAATAGTAAAAATTAAATAAAATTTAACTTAAAATTGTGTTCTGGTCTTCTTGTTGTTCAGCCATGGAAAGCAATAAAATTGTGATAGCAGAAATTAAAAGTGAGCAGAGACTTATTTAAAAATTGGTATTCTCCTTTTCGATGCCAAAATAAGAACTAGAAAGTTTTAATAAGGCAACAGTCTGAAGAAACAATTTATTGAAGAGAATATGGGTTTCTAAATCCTAACAAGTTTTTTTTACATATGTGAGTCAAGTTTGGCTGCCTTGAATCCTACTATGACTTTAATGGAAGTTCTAGTTAGGGTGGAAAGTGTCAAAGAAAACAATTGCACCAGACAAAGTTAAACACAAAAAAGCTGTTATTGAAGGCTATTGCAAAAGGACAAAGAGGCCAGAACTTAGTCTGAACTCAGCTCCACTGAAACAAACAGCAGTAGAGATTTTAAGAGCTGGGATGAGGGGGAGATCATAGACCCCTTGTCTTTGCTAGTTGTCTTTTTCCAAAGGAATATTAAACTATCTTTTATCTTTATGACAGAAGGTAATTTTACAAATTAGAACAATATGCCTACCAAAATTTGGCTCTTACTCTTTCATGGAATCTGGGAGATAATGGTGTTATCTTTCTTGAGGATTACATTTCAAAGGCATGGCTCTGAGGTCCTTGAAATGGACATTTCTGAAGTGTAAAACTGGCAAGTGGGCTCTTAAAAAATTTATTTATCAAAGAGGCAGAGAAAGAATTTACAATGATAACATTTCTAAAATATGCTAAAGAAAAAAAGAGGCCAGGAGCCAAGAATCAGAAATAATCCTGTCTAAAATTTTATCAAGCTGAGGGGATGGTTTTAGTCAAAGGTTTAGTGTAAGGGGAATTTCTATGAACAAGAGGAAGAGAAGAGCTTTTAACTACACAGGAAGAAGAAAGTTCCCAGGAGATGTGACTATGGCTCTGCCTGTGTCTCTGATCAGGTATTCAGCCCCAACATTCTCCTGGGACTCGCTCAAACAGATAGATAGGAAAAAATAGACAGTTAAAGATGAGAAAATATGCAGGCTGGTGTCTTACTTCTCTAGTGCACATAGTGTGTCCCAGGAATGACAGAGTGGCAGGACAGGGGGAAGTGCCTGAGAGATCAATTCCCTTACTCTCAGCTTGTGAGTGCTGTCTGAAAAGCCAGTCTCTCCAAGCTTGGTGGGAGGGGTACTCACAACTGGTTTGACAGGACCAGTGGAGGCCCCTGGTGGGACATGCTGGCCTCAGAATGTGAAGTCTTGGAGGCTAGAGGAAAATGGCAGTGGGTGACCAGAAACTTCATCAGTGGGTACCAATACATGCAAAATCAAAGAGAAGATGAGCCATGTCAGCAGATATCAGTGAAGAATGCCCAGAGAAGACTCCACTGACCATGCACAGCACAGATCAGCCTGTTCCAGAGGACAGTGCAAATGGCACGCTGCAGCAACAGAGGCGACTTCGACCCCGCCCACGCCGTCAGCAGCTCGGACCCTAGGGCCAGATACCACCACAGAGGCTAATTCCAGTGGTCGCCCCGCATCTCAGGAAGACGGGAACCTGCACTCAGCACCATCCCTGTGGCTGCACAGGGCCCAGGACCCGTAACCCGGCGCTCTGGGTGCGGGCCAAGAAAGAGCATAAAATAGGGTGGCATGTCGGTGAACTCGGTGACCCTCTGACAACCTGGGAGCAGCCCCAACAGCCTCAGTTGTGGGCTCAGCTGCAACTGCCACCTGCCGATGGCGCACGGGAGCAGCAGTGGCAACCCTTGACCCTGTCCCCGCCACCAGCAGCGTGGACAGCAGGGACAGATAGCGCCGCGGCGCCTAAGACCTTAGGCCACGCAGCTACAGGAGGACGTGAAACTGGCGCTGACTGCCCGCCAGAAGCTATGCAATCCCCAGCGCAGGCGAGCCCGCAGTCTGGGCGCGGGCCAAAGATCAGAGACTACGATGAAAGGACGGTGAACTTGGTGACCCTGAGTCTCGCAATGGGTTTAGCTTCAGCTGCCACCTGCAACCAACCCTGACCCTGCCCGCGTCACCAGCAGCAGTAACTCAGGGCCAGATGCCGCCTCAGCGGCTAATTCAGGTAATCGTCCTCCAGCTGCAGCAGGGCGGAAATCCGCTGCTCAGCCCCATCTCCGCGGCTGCACGGAGCCCAGCGCCCGCACAGAGCCCGGCGCCGGCACAACCCGCTCTGGGTAAGGGCAAAGGAAGAGCGGACCTAGGGTGGGAGGACCCTGCACTCCCTGACCCTCAGGCCGTCTGGGGCCAGCCTTGCCAGCCTCGGTCTAAAGCTCCGCTGCAGCTGCTACCTGCTCATGGCGCACAGCCGCTGCAAACCCGGACTCCGCCCGCCGACACCAGCGGCCTCGAAACCCTAGAGCCAGACTCCACCTAGTGGCCAAAATCAGGCAGTCGGCCCACAGCTGTAGAAGAGCGGGAACTTGCCCTTCAGCGGATTCCTGGAGGCTGCACAGTGCCCAGCGCCAGCCACCGGGTGATCTGGGCGCAGGCAAATGACCCTCAGGCCGTCTGGGACCGGACCAGCCCTGCAGCGTCAGCGGTGGGCTCAGGGGCGGCTGCCACGTGCACACGGTGAACTATAGCAGCTGTGGCAGCCCCCAACCCTGTGCAAGCCACCGGCAGTGCGGACCGCATGATCAAAAGCCGCCGCGGCGCCTAACTCAGGCTGCCGGCCCCCCAGCAGCCAGAGGGCGGAAACTTGCAGCTTAGCCCCATCTCCCAGCGCCTGCACTATGCTCAGCGCCTGCAATCCCACTCTCTGGGCGCGGGCAAGGAAGACTGGACCTTAGGGTTGGAGGGCGATGCATTCGGGGACCCTCAAGGCTTCTGGAATAAGCCCTTCCAGCCTCCGACGCGGGCTTAGCTGCAGCTGCCAGCTGCACACTCCTGGAAGCAGCAGCGGTGGCAGCTCTGGTCTCTGCCAGCTCCAGCAGCAGCGCGGACTGCAGAGCCAGAGGTCACTGCAGCGCCTGTTAGGAGGTTGGCCTCTCAGCTGCAGGAGGGCGGGAATCTGCGCCCAACCAGATCCTCATGGCTGCACAGTGTCCAACGCCCACGACCTTGCAATCTGGGCGCCGGCCTAGGAATAACGGACCCTGGGGTGGAAGGGCGGTGCACTCAGCCACCTTTAGACAGCCTCAGACCAGCCCTGACAGCATCTGCCTTGGGCTCAGCTGCAGCTGGCACCTGCGCATGGCGCACGGCAGTAGTAGTGGCAGTCCTGACCCTGCCCGCAGACACCAGCAGCAAAGACCCCAGGGCCAGATGCCTCCAAGGCATCTAAGTCAGGTGGTCCGTCCCATAGCTACAGGAGGGCGGGAATCGGCTGCTCAGCCCCATAGCAGCTGTGGCAGCCCCCATCTCTGTCTATGCCACCAGTAGCACATACCCCAGGGCCAGATACTGCGGTGGCGCCTAATTCAGACTGTAGCTGCAGCAGGGCAGGAATCTGCCGCTCAGCCCCATCCTGGAGGCTGCTCAGAGTCTAGCGCTCGTACACCGCGTCCTGGGAGCAGGTTAAGGAAGAGCAGACCCTAGGGTGGTAGGGCGACGCACCCAGACACCCTCAGGGTGTCTGGGACCAGCACTGCCAGTCTCTGCCACGCGCTCAGCTGCAGCTACCACCGCCAGGTGGCTCCCTGCAGCAGCGGTGGAACCCCCGCTGACCTTGCCCGCCGCCAACAGCAGTGAGGATTCCACGGCTGGATCCCTTGCCAGGGCGGGAAGCTGCCGCTCAGCCTATTCTGGGCAGCTGCACAGGGCCCAGCTCCTGAAACCCCGAGCTCTGAGCTCGGGCCAAGGAAGAGTAGACCCTAGGCTGGGAGGGCGGTGCACTCGGCGATCCTCACGCTTTCTAGGACCAACCCTGCCGGCGTCTACTGAGAACTCAGCTACAGCTGCCACCTGTACAAGGGCGCCGCAGCAGCAGAGCAACCGGGCACTTTGCCTGCACCACCAAGAGCCAGGACACTGGGGACAACGCCGCCTCAGCGCCTAATTCAGGCAGTCAGCCCCGCAGCTGCAGCAGGGCAGAAACCTATGCCCTCGGCGCAGTCCCCTTGGCTGCACAGTTCCCAGTGCCCGCGTCCCAGAACTCTGGGTGCAGGCAAAGGAAGAGC T 4 PASS ID=chr18-14450643-DEL-9851;SVTYPE=DEL;SVLEN=-9851;TIG_REGION=h1tg012520l:10494-10494,h2tg012120l:10494-10494;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=126.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:8:12:7 +chr18 14641276 chr18-14641277-INS-407 T TTCTCCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCC 4 . ID=chr18-14641277-INS-407;SVTYPE=INS;SVLEN=407;TIG_REGION=h1tg000102l:148838-149244;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,6;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=127.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:2,2:4:2:2:14:2,0,2,0:7 chr18 14641376 Sniffles2.INS.66S11 C CTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTCTCTTCCCCTCTCCCGCTTGCCGCCCTC 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=190;SUPPORT=2;COVERAGE=4,4,4,4,4;STRAND=+;AF=0.5;STDEV_LEN=0;STDEV_POS=70.004;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=127.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:2,2:4:2,0,2,0:6 -chr18 14650391 chr18-14650392-INS-56 A ATGTATATGTATTATAACATACATATACACGTGTATATGTATTATAACATATACACG 4 . ID=chr18-14650392-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h1tg000102l:139681-139736;QUERY_STRAND=-;HOM_REF=0,10;HOM_TIG=0,50;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=128.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,6:6:.:6:16:0,0,5,1:7 -chr18 14650993 chr18-14650994-DEL-72;pbsv.DEL.293 TATTATGATATACATATGTATATGTATTATGATATACATATGTATATGCATTATGATATACATATGTATATGC T 4 PASS ID=chr18-14650994-DEL-72;SVTYPE=DEL;SVLEN=-72;TIG_REGION=h1tg000102l:139079-139079;QUERY_STRAND=-;HOM_REF=0,16;HOM_TIG=0,16;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=129.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:3:3:21:7 +chr18 14650391 chr18-14650392-INS-56 A ATGTATATGTATTATAACATACATATACACGTGTATATGTATTATAACATATACACG 4 . ID=chr18-14650392-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h1tg000102l:139681-139736;QUERY_STRAND=-;HOM_REF=0,10;HOM_TIG=0,50;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=128.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,6:6:.:6:16:0,0,5,1:7 +chr18 14650993 chr18-14650994-DEL-72;pbsv.DEL.293 TATTATGATATACATATGTATATGTATTATGATATACATATGTATATGCATTATGATATACATATGTATATGC T 4 PASS ID=chr18-14650994-DEL-72;SVTYPE=DEL;SVLEN=-72;TIG_REGION=h1tg000102l:139079-139079;QUERY_STRAND=-;HOM_REF=0,16;HOM_TIG=0,16;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=129.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:3:3:21:7 chr18 14667076 pbsv.DEL.294 AAATATATATATATATATATATATAT A 2 PASS SVTYPE=DEL;SVLEN=-25;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,4,1:4 chr18 14676381 pbsv.DEL.295 CACACACACACACACACACACACACACACAT C 2 PASS SVTYPE=DEL;SVLEN=-30;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,4,3:4 -chr18 14689078 chr18-14689079-DEL-134;pbsv.DEL.296 TTTATTTTATATGTAAATATTTATATTTATATTTATATGTAAATATTTATATTTATATTTATATGTAAATATTTATATTTATATTTATATGTAAATATTTATATTTATATTTATATGTAAATATTTATATTTATA T 4 PASS ID=chr18-14689079-DEL-134;SVTYPE=DEL;SVLEN=-134;TIG_REGION=h1tg000102l:101081-101081;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=130.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 +chr18 14689078 chr18-14689079-DEL-134;pbsv.DEL.296 TTTATTTTATATGTAAATATTTATATTTATATTTATATGTAAATATTTATATTTATATTTATATGTAAATATTTATATTTATATTTATATGTAAATATTTATATTTATATTTATATGTAAATATTTATATTTATA T 4 PASS ID=chr18-14689079-DEL-134;SVTYPE=DEL;SVLEN=-134;TIG_REGION=h1tg000102l:101081-101081;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=130.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:8:22:7 chr18 14725192 pbsv.DEL.297 CTCTCTCTCTCTCTCTCTCTCTCTC C 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,5,2:4 chr18 14742795 pbsv.DEL.298 TTTTATATATATATATATATATATATATATATATATATA T 2 PASS SVTYPE=DEL;SVLEN=-38;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 chr18 14766496 pbsv.INS.DUP.299 A AAGAAAAGAAAAGAAAAGAAAAGAAA 0 PASS SVTYPE=INS;SVLEN=25;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,7,3:4 chr18 14822942 chr18-14822943-DEL-363;pbsv.DEL.300 TACGTGCTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC T 4 PASS ID=chr18-14822943-DEL-363;SVTYPE=DEL;SVLEN=-363;TIG_REGION=h1tg013633l:30410-30410,h2tg013184l:30410-30410;QUERY_STRAND=+,+;HOM_REF=0,14;HOM_TIG=0,14;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=131.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 chr18 14847066 pbsv.DEL.301 ATATATATATATATATATATATATATA A 2 PASS SVTYPE=DEL;SVLEN=-26;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 -chr18 14855936 chr18-14855937-DEL-1623 CCTGGCAGAGGCGCTCCTCACCTCCCAGATGATGGGCAGCTGGGCAAAGGCGCTCCTCACCTCCCAGACTGGGCGGCCAGGCAGAGGTGCTCCTCGCCTCCCACATGGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCTAGATGGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACGGGGAGACCAGGAAGAGGTGCTCCTCACTTCCCAGATGGGACGGCCAGGCAGAGGCGCTCCTCACTTCCCAGATGGTGTGTCATCCGTGAAGAGGCGCTTCTCACCTCCCAGATGATTGGCAGCCAGAGAAAGGTGCTCCTCACTTCCCAGATGGGGCGGCCGAGAAATGCCACTCCCCATTCCCAGATGGGGTGGAGGTCAGGCAGAGGCGCTCCTCACCTCCCAGATGGGGCAGCCGGGCAGAGGCGCTCCTCACCTCCCAGATGGGGAGGCTGGGCAGAGGCGCTCTTCACTTCCCAGAGGGGGTGGCCGGGCAGAGGCGCTCCTCAACTGCCAGACCGGGCGGCCGGCCAGAGGAACTCCTCACCTCCCAGACAATGGGCGGCTGGGGAGAGGTGCTCCTCACCTCCCAGATGATGGGCAGCCAGGCAGAGGCGCTCCTCACTTCCCAGATGGGGCGGCCGGGCAGAGGCGCTCTTCACTTCCCAGATGGCGCGGCCAGGCAGAGGCGCTCCTCAGTTCCCAGATTGTGTGTCGTCCATTCAGAGGCACTCCTCACCTACCAGATGATGGGCAGCTGGAGGGAGGCACTCCTCACCTCCCAGATGGGGCGACTGGGAAGAGGCGCTCCCCACTTCCCAGACAGGGTGGGAGCTGGGCAGAGGCGCTCCTCACAACCCAGACAGGGTGGCCGGGCAGAGGCACTCCTCACCTCCCAGACAATGGGCAGCCAGGCAGAGGCACTCCTCACTTCCCAGATGGGGCGGCTGGGCAGAGGTGCTCCTCACTTCCCAGATGGGGCAGCTGGGCAGAGGCGCTCCTCACTTCCCAGATGGGGCAACCAGGCAAGAGGTGCTCCTCATTTCCCAGATGGGGCGGCTGGGAAGAGGCACTCCTCACCTACCAGACGAAGGGCAGCCAGGCAGAGGCACTCCTCACATCCCAAACGATGGGTGGCCGGGCAGAGGCACTCCTCACCTCCCAAACGGGGCGGCTGGGCAGAGGTGCTCCTCACCTCCCAGGGGGGGCAGCCAGGCAGAGGGGCTCCTCACCTCCCAGACAATGGGCAGCCAGGCAGAGGTGCTCCTCATTTCCCAGACGGGGTGGCCAGGCAGAGGCACTCCTCACCTCCCAGACATCACGGCCAGGCAGAGGTGCTCCCCACTTCCCAGACGGGGCGGCTGGGCAGAGGCGCTCCTCACCTCCCAGATGAGGCGGCCTGGCAGAGGAACTCCTCACCTCCCAGATGATGGGCAGCTGGGCAAAGGCGCTCCTCACCTCCCAGACTGGGCGGCCAGGCAGAGGTGCTCCTCGCCTCCCACATGGGGTGGCCGGGCAGAGGCACTCCTCACCTCCTAGATGGGGTGGCTGGGCAGAGGCGCTCCTCACCTCCCAGACGGGGAGACCAGGAAGAGGCGCTCCTCACCTCCCAGATGGGGCGGG C 4 . ID=chr18-14855937-DEL-1623;SVTYPE=DEL;SVLEN=-1623;TIG_REGION=h1tg013633l:63023-63023,h2tg013184l:63023-63023;QUERY_STRAND=+,+;HOM_REF=0,86;HOM_TIG=0,86;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=132.0 GT:AD:DP:SAC:SUPP 0/1:2,2:4:1,1,1,1:5 +chr18 14855936 chr18-14855937-DEL-1623 CCTGGCAGAGGCGCTCCTCACCTCCCAGATGATGGGCAGCTGGGCAAAGGCGCTCCTCACCTCCCAGACTGGGCGGCCAGGCAGAGGTGCTCCTCGCCTCCCACATGGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCTAGATGGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACGGGGAGACCAGGAAGAGGTGCTCCTCACTTCCCAGATGGGACGGCCAGGCAGAGGCGCTCCTCACTTCCCAGATGGTGTGTCATCCGTGAAGAGGCGCTTCTCACCTCCCAGATGATTGGCAGCCAGAGAAAGGTGCTCCTCACTTCCCAGATGGGGCGGCCGAGAAATGCCACTCCCCATTCCCAGATGGGGTGGAGGTCAGGCAGAGGCGCTCCTCACCTCCCAGATGGGGCAGCCGGGCAGAGGCGCTCCTCACCTCCCAGATGGGGAGGCTGGGCAGAGGCGCTCTTCACTTCCCAGAGGGGGTGGCCGGGCAGAGGCGCTCCTCAACTGCCAGACCGGGCGGCCGGCCAGAGGAACTCCTCACCTCCCAGACAATGGGCGGCTGGGGAGAGGTGCTCCTCACCTCCCAGATGATGGGCAGCCAGGCAGAGGCGCTCCTCACTTCCCAGATGGGGCGGCCGGGCAGAGGCGCTCTTCACTTCCCAGATGGCGCGGCCAGGCAGAGGCGCTCCTCAGTTCCCAGATTGTGTGTCGTCCATTCAGAGGCACTCCTCACCTACCAGATGATGGGCAGCTGGAGGGAGGCACTCCTCACCTCCCAGATGGGGCGACTGGGAAGAGGCGCTCCCCACTTCCCAGACAGGGTGGGAGCTGGGCAGAGGCGCTCCTCACAACCCAGACAGGGTGGCCGGGCAGAGGCACTCCTCACCTCCCAGACAATGGGCAGCCAGGCAGAGGCACTCCTCACTTCCCAGATGGGGCGGCTGGGCAGAGGTGCTCCTCACTTCCCAGATGGGGCAGCTGGGCAGAGGCGCTCCTCACTTCCCAGATGGGGCAACCAGGCAAGAGGTGCTCCTCATTTCCCAGATGGGGCGGCTGGGAAGAGGCACTCCTCACCTACCAGACGAAGGGCAGCCAGGCAGAGGCACTCCTCACATCCCAAACGATGGGTGGCCGGGCAGAGGCACTCCTCACCTCCCAAACGGGGCGGCTGGGCAGAGGTGCTCCTCACCTCCCAGGGGGGGCAGCCAGGCAGAGGGGCTCCTCACCTCCCAGACAATGGGCAGCCAGGCAGAGGTGCTCCTCATTTCCCAGACGGGGTGGCCAGGCAGAGGCACTCCTCACCTCCCAGACATCACGGCCAGGCAGAGGTGCTCCCCACTTCCCAGACGGGGCGGCTGGGCAGAGGCGCTCCTCACCTCCCAGATGAGGCGGCCTGGCAGAGGAACTCCTCACCTCCCAGATGATGGGCAGCTGGGCAAAGGCGCTCCTCACCTCCCAGACTGGGCGGCCAGGCAGAGGTGCTCCTCGCCTCCCACATGGGGTGGCCGGGCAGAGGCACTCCTCACCTCCTAGATGGGGTGGCTGGGCAGAGGCGCTCCTCACCTCCCAGACGGGGAGACCAGGAAGAGGCGCTCCTCACCTCCCAGATGGGGCGGG C 4 . ID=chr18-14855937-DEL-1623;SVTYPE=DEL;SVLEN=-1623;TIG_REGION=h1tg013633l:63023-63023,h2tg013184l:63023-63023;QUERY_STRAND=+,+;HOM_REF=0,86;HOM_TIG=0,86;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=132.0 GT:AD:DP:SAC:SUPP 1/1:2,2:4:1,1,1,1:5 chr18 14858279 pbsv.INS.303 T TCGGGGGAGGCGGCGCTCAGCCCGGGCAGAGT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=31;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:2,2,0,1:4 chr18 14858507 Sniffles2.DEL.27ES11 GGCAGAGGTGCTCCTCACTTCCCAGATGGGGCAGCTGGGCAGAGGCGCTCCTCACTTCCCAGATGGGGCAACCAGGCAAGAGGTGCTCCTCATTTCCCAGATGGGGCGGCTGGGAAGAGGCACTCCTCACCTACCAGACGAAGGGCAGCCAGGCAGAGGCACTCCTCACATCCCAGACGATGGGTGGCCGGGCAGAGGCACTCCTCACCTCCCAGACGGGGCGGCTGGGCAGAGGTGCTCCTCACCTCCCAGGGGGGGCAGCCAGGCAGAGGGGCTCCTCACCTCCCAGACAATGGGCAGCCAGGCAGAGGTGCTCCTCATTTCCCAGACGGGGTGGCCAGGCAGAGGCACTCCTCACCTCCCAGACATCACGGCCAGGCAGAGGTGCTCCCCACTTCCCAGACGGGGCGGCTGGGCAGAGGCGCTCCTCACCTCCCAGATGAGGCGGCCTGGCAGAGGAACTCCTCACCTCCCAGATGATGGGCAGCTGGGCAAAGGCGCTCCTCACCTCCCAGACTGGGCGGCCAGGCAGAGGTGCTCCTCGCCTCCCACATGGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCTAGATGGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACGGGGAGACCAGGAAGAGGCGCTCCTCACCTCCCAGATGGGGCGGGCTGGCAGAGGCGCTCCTCACCTCCCAGATGATGGGCAGCTGGGCAAAGGCGCTCCTCACCTCCCAGACTGGGCGGCCAGGCAGAGGCGCTCCTCGCCTCCCACATGGGGTGGCTGGGCAGAGGCGCTCCTCACCTCCTAGATGGGGTGGCCGGGCAGCGGCGCTCCTCACCTCCCAGACGGGGAGACCAGGAAGAGGTGCTCCTCACTTCCCAGATGGGGCAGCCAG G 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-899;SUPPORT=2;COVERAGE=3,4,3,4,4;STRAND=+-;AF=0.5;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:2:2:2 chr18 14858942 pbsv.DEL.304 CCAGATGAGGCGGCCTGGCAGAGGAACTCCTCACCTCCCAGATGATGGGCAGCTGGGCAAAGGCGCTCCTCACCTCCCAGACTGGGCGGCCAGGCAGAGGTGCTCCTCGCCTCCCACATGGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCTAGATGGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACGGGGAGACCAGGAAGAGGCGCTCCTCACCTCCCAGATGGGGCGGGCTGGCAGAGGCGCTCCTCACCTCCCAGATGATGGGCAGCTGGGCAAAGGCGCTCCTCACCTCCCAGACTGGGCGGCCAGGCAGAGGCGCTCCTCGCCTCCCACATGGGGTGGCTGGGCAGAGGCGCTCCTCACCTCCTAGATGGGGTGGCCGGGCAGCGGCGCTCCTCACCTCCCAGACGGGGAGACCAGGAAGAGGTGCTCCTCACTTCCCAGATGGGGCAGCCAGGCAGAGGCGCTCCTCACTTCCCAGATGGTGTGTCATCCGTGAAGAGGCGCTTCTCACCTCCCAGATGATTGGCAGCCAGAGAAAGGTGCTCCTCACTTCCCAGATGGGGCGGCCGAGAAATGCCACTCCCCATTCCCAGATGGGGTGGAGGTCAGGCAGAGGCGCTCCTCACCTCCCAGATGGGGCAGCCGGGCAGAGGCGCTCCTCACCTCCCAGATGGGGAGGCTGGGCAGAGGCGCTCTTCACTTCCCAGAGGGGGTGGCCGGGCAGAGGCGCTCAACTGCCAGACCGGGCGGCCAGCCAGAGGAACTCCTCACCTCCCAGACAATGGGTGGCTGGGGAGAGGTGCTCCTCACCTCCCAGATGATGGGCAGCCAGGCAGAGGCGCTCCTCACTTCCCAGATGGGGCGGCCGGGCAGAGGCGCTCTTCACTTCCCAGATGGCGCGGCCAGGCAGAGGCGCTCCTCAGTTCCCAGATTGTGTGTCGTCCATTCAGAGGCACTCCTCACCTACCAGATGATGGGCAGCTGGAGGGAGGCACTCCTCACCTCCCAGATGGGGCGACCGGGAAGAGGCGCTCCCCACTTCCCAGACAGGGTGGGAGCTGGGCAGAGGCGCTCCTCACAACCCAGACAGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACAATGGGCGGCCAGGCAGAAGCACTCCTCACTTCCCAGATGGGGCGGCTGGGCAGAGGCGCTCCTCACTTCCCAGATGGTGTGTCATCCATGCAGAGGCGCTCCTCACCTCCCAGATGATGGGCAGCAGGAGAAAGGTGCTCCTCACTTCC C 2 PASS SVTYPE=DEL;SVLEN=-1285;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:2,1,1,1:4 chr18 14859858 Sniffles2.DEL.27FS11 GGCAGAGGCGCTCCTCAGTTCCCAGATTGTGTGTCGTCCATTCAGAGGCACTCCTCACCTACCAGATGATGGGCAGCTGGAGGGAGGCACTCCTCACCTCCCAGATGGGGCGACCGGGAAGAGGCGCTCCCCACTTCCCAGACAGGGTGGGAGCTG G 0 PASS IMPRECISE;SVTYPE=DEL;SVLEN=-155;SUPPORT=2;COVERAGE=4,4,4,4,5;STRAND=+-;AF=0.5;STDEV_LEN=38.004;STDEV_POS=145.249;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:2:2:2 -chr18 14860388 chr18-14860389-INS-351 T TGGCCGGGCAGAGGCGCTCCTCAACTGCCAGACTGGGCAGCCGGCAAGAGGAACTCCTCACCTCCAAGATGATGGGCGGCCGGGCAGAGGCACTTCTCACCTCCCAGACGGGGCGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACAGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCTAGACGGGGCGGCCGGGCAGAGGCGCTCCACACTTCCCAGATGGGGTGGTGGCCGGACAGGGGCGCTCCTCACAACCTGGATGGGGCGGCCGGGCAGAGGCACTCCCCACTTCCCAGACGGGGCAGCCGGGCAGAGTGGCCAGGCAGAGGCACTCCTCACAACCCAGATGGGGC 4 . ID=chr18-14860389-INS-351;SVTYPE=INS;SVLEN=351;TIG_REGION=h1tg013633l:65854-66204,h2tg013184l:65854-66204;QUERY_STRAND=+,+;HOM_REF=0,22;HOM_TIG=0,22;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=132.1 GT:DR:DV:GQ:SUPP 0/1:2:3:11:3 +chr18 14860388 chr18-14860389-INS-351 T TGGCCGGGCAGAGGCGCTCCTCAACTGCCAGACTGGGCAGCCGGCAAGAGGAACTCCTCACCTCCAAGATGATGGGCGGCCGGGCAGAGGCACTTCTCACCTCCCAGACGGGGCGGCCGGGCAGAGGCGCTCCTCACCTCCCAGACAGGGTGGCCGGGCAGAGGCGCTCCTCACCTCCTAGACGGGGCGGCCGGGCAGAGGCGCTCCACACTTCCCAGATGGGGTGGTGGCCGGACAGGGGCGCTCCTCACAACCTGGATGGGGCGGCCGGGCAGAGGCACTCCCCACTTCCCAGACGGGGCAGCCGGGCAGAGTGGCCAGGCAGAGGCACTCCTCACAACCCAGATGGGGC 4 . ID=chr18-14860389-INS-351;SVTYPE=INS;SVLEN=351;TIG_REGION=h1tg013633l:65854-66204,h2tg013184l:65854-66204;QUERY_STRAND=+,+;HOM_REF=0,22;HOM_TIG=0,22;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=132.1 GT:DR:DV:GQ:SUPP 1/1:2:3:11:3 chr18 14921249 chr18-14921250-INS-60 G GTGTAGAGGGCAGGAGACACATGAGGCGCATGTTTAGATACAACTGCCTGTTGTGGTGGGT 4 . ID=chr18-14921250-INS-60;SVTYPE=INS;SVLEN=60;TIG_REGION=h1tg013633l:127049-127108,h2tg013184l:127049-127108;QUERY_STRAND=+,+;HOM_REF=0,57;HOM_TIG=0,57;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=133.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,3:3:.:3:8:0,0,1,2:7 chr18 14931955 pbsv.INS.306 T TCCTGTACTGTCCCGGGCCCCCCACCCCACCTCCCTCCTGCTCTGTCCCGGGCCCCCCACCCCACCTCCCTCCTGCTCTGTCCCGGGCCCCCCACCCCACCTCCCTCCTGCTCTGTCCCGGGCCCCCCACCCCATCTCCCTCCTGTACTGTCCGGGCCCCCCACCCCACCTCCCTCCTGCTCTGTCCTAGGCCCCCCACCCCACCTCCCTCCTCCCTCCTGCTCTGTCCCAGGCCCCCGAGCCCACCTCCCTCCTGCTCTGTCCCAGGCTCCCCACGCCACTTCCCTCCTGCTCTGTCCCAGGCTCCTCACCGCACCTCCCTCCTGCTCTGTCCCAGGCCTCCCACCCCACCTCCCTCCTCCCTCCTCCCTCCTGCTCTGTCCCAGCCCCCCACCCCACCTCCCTCCTCCCTCCTCCCTCCTGCTCTGTCACAGGGCCCCCACCCCACCTCCCTCCTCCTTCCTCCCTCCGGCTCTGTCCCAGGCCCCCCACCCCACCTCCCTCCTCCCTCCTGCTCCGTCCCAGGCCCCCCACCCCACCTCCCTCCTCCCTACTGCTCTGTCCCAGGCCCCCCACCCCACCTCCCTCCTCCCTCCTGCTCCGTCCCAGGCCCCCCACCCCACCTCCCTCCTGCTCTGTCCCGGACCCCCCACCCCACCTCCCTCCTGCTCTGTCCCGGGCCCCCCACCCCACCTCCCTCCTGCTCTGTCCCGGGCCCCCCACCCCACCTCCCTCCTGCTCTGTCCCGGACCCCCCACCCCACCTCCCTCCTGCTCTGTCCTGGGCCCCCCACCCCACCTCCCTCCTGCTCTGTCCCGGGCCCCCCACCCCACCTCCCTCCTCCTTCCTCCCTCCGGCTCTGTCCCGGGCCCCCCACCCCACCTCCCTCCTCCTTCCTCCCTCCGGCTCTGTCCCAGGCCCCCCACCCCACCTCCCTCCTCCTTCCTCCCTCCGGCTCTGTCCCAGGCCCCCCACCCCCA 2 PASS SVTYPE=INS;SVLEN=979;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,0,1:4 chr18 15074618 pbsv.DEL.307 GCTTAGTCAAGATATTTAACTGCTTCTTTTTCTCTTCACTATGAC G 2 PASS SVTYPE=DEL;SVLEN=-44;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,2:2:0,0,1,1:4 @@ -508,9 +508,9 @@ chr18 15803747 pbsv.DEL.328 GATTTCGTGTTAAACGGGATTGTCTTCAGGTAAAATCTAGACAGAAGCATTC chr18 16550973 pbsv.INS.DUP.329 G GAGCAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTCAGGCCTATGTTGGAAAGGGAAATATCTTCCCGTAACAACTAGGCAGAAGCATTCTCAGAAACTTATTTGAGATGTGTGTACTCAACTAAGAGAATTGAACCACCGTTTTGAA 0 PASS SVTYPE=INS;SVLEN=169;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,0,1:4 chr18 16552117 pbsv.INS.330 A AGATGTGTGTACTGAACTAAGAGAATTGAACCACCGTTTTGAAGGAGCAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTCAGGCCTATGTTGGAAAGGGAAATATCTTCCCGTAACAACTAGGCAGAAGCATTCTCAGAAACTTATTT 2 PASS SVTYPE=INS;SVLEN=169;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,0,1:4 chr18 17299536 pbsv.DEL.331 CTTTCTTTTGATAGAGCAGTTTTGAAATGCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGTTTTGAGGATTTCGTTGGAAGCGGGAATTCATACAAATTGCAGACTGCAGCGTTCTGAGAAACATCTTTGTGGTGTTTGTATTCAGGACAGAGAGTTGAACA C 2 PASS SVTYPE=DEL;SVLEN=-167;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,1,0:4 -chr18 17302014 pbsv.DEL.332 AAACTAGACAGAAGCGTTCTGAGAAATTGCTTTCTGATGTTTGCTTTCAAGTCAAAAGTTGAACACTCCCTTTCATAGAGCAGTCTTGAAACACCCCTTGTGTAGTATCTGGAACTGGACATTTGGAGCGCTTTCAGGGCTAAGGTGAAAAAGGAAATATCTTCCCATAAAAACTGGACAGAAGCATTCTCAGAAACTTGTTTATGCTGTATTTACTCAACTAACAAGGTTGAACCTTTCTTTTGATAGAGCAGTTTTGAAATGCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTTTGAGGATTTCGTTGGAAGCGGGAATTCATACAAATTGCAGACTGCAGCGTTCTGAGAAACATCTTTGTGATGTTTGTATTCAGGACACAGAGTTGAACATTCCCTATCATAGAGCAGGTTGGAATCACTCCTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTCAGGCCTATGTTGAAAAAGGAAATATCTTCCCATAAC A 2 PASS SVTYPE=DEL;SVLEN=-508;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=157.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:2:5:6 +chr18 17302014 pbsv.DEL.332 AAACTAGACAGAAGCGTTCTGAGAAATTGCTTTCTGATGTTTGCTTTCAAGTCAAAAGTTGAACACTCCCTTTCATAGAGCAGTCTTGAAACACCCCTTGTGTAGTATCTGGAACTGGACATTTGGAGCGCTTTCAGGGCTAAGGTGAAAAAGGAAATATCTTCCCATAAAAACTGGACAGAAGCATTCTCAGAAACTTGTTTATGCTGTATTTACTCAACTAACAAGGTTGAACCTTTCTTTTGATAGAGCAGTTTTGAAATGCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGGTTTGAGGATTTCGTTGGAAGCGGGAATTCATACAAATTGCAGACTGCAGCGTTCTGAGAAACATCTTTGTGATGTTTGTATTCAGGACACAGAGTTGAACATTCCCTATCATAGAGCAGGTTGGAATCACTCCTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTCAGGCCTATGTTGAAAAAGGAAATATCTTCCCATAAC A 2 PASS SVTYPE=DEL;SVLEN=-508;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=157.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:2:5:6 chr18 17302053 pbsv.DEL.333 TTTGCTTTCAAGTCAAAAGTTGAACACTCCCTTTCATAGAGCAGTCTTGAAACACCCCTTGTGTAGTATCTGGAACTGGACATTTGGAGCGCTTTCAGGGCTAAGGTGAAAAAGGAAATATCTTCCCATAAAAACTGGACAGAAGCATTCTCAGAAACTTGTTTATGCTGT T 2 PASS SVTYPE=DEL;SVLEN=-170;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,1,0:4 -chr18 17303131 pbsv.DEL.334 TTGTAGTGTGTGTAAGTGGACATTTGGAGCACTTACCGGCCTAAGGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTACTCGTGATGTGTGTCCTCAACTAAAGGAGTAGAACCTTTCTTTTCATAGAGAAGTTTTGAAACGCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGTTTGGAGGATTTCGTTGGAAGCGGGAATTCATACAAATTGCAGACTGCAGCGTTCTGAGAAACATCTTTGTGATGTTTGTATTCAGGACACAGAGTTGAACATTCCCTATCATAGAGCAGGTTGGAATCACTCCTTTT T 2 PASS SVTYPE=DEL;SVLEN=-339;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=158.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:2:5:6 +chr18 17303131 pbsv.DEL.334 TTGTAGTGTGTGTAAGTGGACATTTGGAGCACTTACCGGCCTAAGGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTACTCGTGATGTGTGTCCTCAACTAAAGGAGTAGAACCTTTCTTTTCATAGAGAAGTTTTGAAACGCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGTTTGGAGGATTTCGTTGGAAGCGGGAATTCATACAAATTGCAGACTGCAGCGTTCTGAGAAACATCTTTGTGATGTTTGTATTCAGGACACAGAGTTGAACATTCCCTATCATAGAGCAGGTTGGAATCACTCCTTTT T 2 PASS SVTYPE=DEL;SVLEN=-339;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=158.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:2:5:6 chr18 17304654 pbsv.DEL.335 TTTTTCTGGAATCTGCAAGAGTATATTTGCCTAGCCTTGAGGATTTCGTTGGAAACGGGATTGTCTTCAGAGAAAATCTAGACAGAAGCATTCTCAGAAACTTCTTTGGGATGTTTGCATTCAAGTCACAGAGTAGAACATTCCCTTTGGTAGAGCAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTCAGGCCTACGTTGGAAAAGGAAATATCTTCCCATAACAACTAGACAGAAGCATTCTCAGAAACTAGTTTCTGATGTGTGTTCTCAACTAACACAGTTGAACATTTCTTTAGACAGAACAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGCTATTTGGCTAGATTTGAGGATTTCGTTGGAAACGGGATTACATATAAAAAGCAGTCAGCAGCATTCTCAGAAAGTTCTTTGTGATGATTGCATTCAAGTCACAGAATTGAACATTCCCTTTCACAGAGCAGGTTTGAAACACTCTTTTTGTAGTGTGTGTAAGTGGACATTTGGAGCACTTACCGGCCTAAGGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTACTCGTGATGTGTGTCCTCAACTAAAGGAGTAGAACCTTTCTTTTCATAGAGAAGTTTTGAAACGCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTAGTTTTGAGGATTTCGTTGGAAGCGGGAATTCATACAAATTGCAGACTGCAGCGTTCTGAGAAACATCTTTGTGATGTTTGTATTCAGGACACAGAGTTGAACATTCCCTATCATAGAGCAGGTTTGAATCACTCC T 2 PASS SVTYPE=DEL;SVLEN=-847;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,1,0:4 chr18 17306499 pbsv.INS.DUP.336 G GAGCAGGTTTGAAACACTCTTTTTGTATTATCTGGAAGTGGACATTTGGAGCGCTTTCAGGCCTATGTTGGAAAGGGAAATATCTTCCCGTAACAACTAGGCAGAAGCATTCTCAGAAACTTATTTGAGATGTGTGTACTCAACTAAGAGAATTGAATCACCGTTTTGAA 0 PASS SVTYPE=INS;SVLEN=169;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,1,0:4 chr18 17307810 pbsv.DEL.337 TATTTGTGATGTGTGTCCTCAACTGACAGAGTTGAACATTTCTTTTGAGAGAGCAGTTTTGAAACACTCTTTTTGTGGAATCTGCAAGTGGATATTTGGCTGGCTTTGAGGATTTCGTTGGAAACGGGAATACATATAAAAAGCAGACAGCAGCGTTCTGAGAAACT T 2 PASS SVTYPE=DEL;SVLEN=-166;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,1,0:4 @@ -554,8 +554,8 @@ chr18 20624986 pbsv.DEL.365 CAACTCTGTGACTTAAAAGGAAACATCACAAAGAAGCTCCTGAGAATGCTGC chr18 20626650 chr18-20626651-INS-679 G GTATAAAAAGTAGACAGCAGCATTCTCAGAAGCTTCTTTGTGATGTTTGCTTTTAAATCGCAGAGTTCAATATTCCCTTCCATAGAGCAGGTTTGAGACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGCGATTTCAGGCCTAGGTTGAAAAAGGAAATATCTTCCAATAAAAATTAGACGGAAGCATTCTCAAAAATTTCTTTGTGATGTGTGTCCTCAACTAACAGGGTTCAACCTTTCTTTTGATACAGCAGTTTGTAAACACTCTTTTTGTAGAATCTGCATGTGGATATTTGGATAGCTCTAACCATTTCATAGGAAACGAGAATAACTTCATATAAAATCTAGACAGAGGCACTCTCAGAAACTACTTTGTGATATCTGCGTTCAAGTCACAGAGTTGAACATTCCCTTTCTTAGAGCAGGTTTGAGACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTGACGCCTTTGGTGAAAAAGGAAATATCTTCCATAAAAACTAGACAGAAGCATTCTAAGAAACTTCTTGGCGATATATGTACTCACCTAACAGAGTTGAACCTTTCTATTGATAGATCAGTTTCGAAAAGCTCTTTTTGTGGAATCTGCAATTGGATATAAGGATAGTTCTGAGGATTTCGTTGGAGACGGGATTGCA 4 . ID=chr18-20626651-INS-679;SVTYPE=INS;SVLEN=679;TIG_REGION=h1tg017616l:41994-42672,h2tg016998l:41994-42672;QUERY_STRAND=+,+;HOM_REF=0,55;HOM_TIG=0,55;AC=2 GT:SUPP 1/1:1 chr18 20626694 pbsv.DEL.366 GTTTGCTTTTAAGTCACAGAAGTTGAATATTCCCTTCCATAGAGCAGGTTTGAAACCCTCTTTCTCTACTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCTATGGTGAACAAGGAAATATCGTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGTCCTCAACTAACAGAGTTCAACCTCTCTTATGATACAGCAGTTTGGAAACACTCTTTTTGTAGAATATGCAACTGGATATTTGGAGAGCTCTAACTATTTTGTTGGTAACGGGAATATCTTCATATAAAATCTAGACAGAAGCACTCTCAGAAACTACTTTGTGATATCTGCATTCAAGTCACAGAGTTGAATATTCCCTTTCTTAGAGCAGGTTTGAAACCGTCTTTTCGTGGAATCTGCAGGAGGATATTTGGATAGCTTTGAGGATTTCGTAGGAAACGGGATTACATATACAAAGTGGACAGCAGCATTCTCAGAAGCTTCTTTGTGATGTTTGCTTTTAAGTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTCAAACACTCTTTCTGTAATATCTGGAAGTGGCCATTTCGAGCGCTTTCAGGCCTATGGTGAACAAGGAAATATCTTCCCATAAAAACTAAACAGAAGCCTTCGCAGAAACTTGTTTGTGATGTGTGTCCTCAACTCACAGAGTTGAACATTTCGTTTGACAGAGCAGTTTGGAAACACGCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAGCTTTGTGGATTTCCTTGGAAACGGGAGTATCTTCATATAAAACCTAGACAGAAACATTCTCAGAAACTGCTTTGTGATGTCTGTATTCACGTCACAGAGTTGAATATTTCCTTTCATAGAGCAGGTTTGAAACACTCTTTCTGTAGTATCTGGATGTGGACACTTGGAGCGCTTTGAGGCTTACGGTGCAAAAGGAAATATCTTCCAATGAAAACTAGACAGAAGCATTCTCAAAAACTAGTTTGTGATGTATTTCCTCAACTAACAGAGTTGAACCTTTCTATTTACAGAGTAGTTTTGAAAGACTCTTTTTGGAGAATCTACAAGTGGATATTTGAGAGCTTTAAGGATTTCATTGTAAACCGGAATATCTTCAGGTAAACTCTAGACAGAGGCATTCTCAGAAACTTCTTTGTGATGTGTGTCCTCAACTAACAGAGTTCAGCCTTTGTTATGATACAGCAGTTTGGAAACACTCTTTTTGTACTATCAGGAAGTGGACTTTTGGAGCGCTTTGACACCTTTGGTGATAAAGAGATGTCTTCCCATAAAAACCAGACGGAAGCATTCTAAGAGAATTCTTTGGGATATACGTACTCAACTAACAGAGTTGAACCTTTCTATTTATAGATCAGTCTTGAAAAGCTCTTTTCGTGGAATCTGCAAGTGAATCTTAGGATAGCTCTGAGGATTGCGTTGGAAACGGGATTACATATAAAAAGTAGACAGCAGCATTCTCAGAAACTTCTTTGTGATGTTTGCTTTTAAGTCACAGAGTTCAATATTCCCTTCCATAGAGCCGGTTTGAAACACTTTTTTTGTAGTATCTGGAAGTGGACATTTCGAGCGATTTCAGGCCTATGTTGAAAAAGGAAACATCTTCCCATAAAAACAAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGTCCTCAACTAACAGAGTTCAACCTCTCTTATAATACAGCAGTTTGAAAAAACACTTTTTGTAGAATATGCAAGTGGATATTTGAACAGCTCTAACTATTTCGTTCGAAATGGGAATATCTTCATATAAAATCTAGACAGAAGCACTCTCAGAAACTACATTGTGATATCAGTATTCAAATCACAGAGTTGAATATTCCCTTTCTTAGAGCAGGTTTGAAACCGTCTTTTCGTGGAAGCTGCAGGAGGATATTTGGATAGCTTTGAGGATTTCGTTGGAAACGGGATTACATATACAAAGTAGACAGCAACATTCTCAGAAGCTTCTTTGTGATGTTTGCTTCTAAGTCACAGAGTTGAACATTCCCTTTCATACAGCAGGTTTGAAACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCCATGGTGAAAAAGGAAATATCTCCCCATAAAAACTAGACAGAAGCATTCGCAGAAACTTGTTTGTGATGTGTGTCCTCAACCAACAGAGTTGAACATTTCCTGTGACAGAGCAGTTTGGAAACACGCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAGCTTTGTGGATTTCCTTGGGAACGGGAGTATCTTCATATAAAACCTAGACGGAAACATTCTCCGAAACTCCTTTGTAATGTCTGCATTCACGTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTCTGAAGTATCTGGATGTGGACACTTGGAGCGCTTTGACGCTTACGGTGAAAAAAGGAATAACTTCCCATGAAAACTAGACAGAAGCATTCTCACAAACTGGTTTGTGATGTATGTCCTCAACTAACAGAGTTGAACCTTTCTATTTACAGAGCAGTTTTCAAAGACTCTTTTTGGAGAATCTGCAAGTGGATATCTGGAGATCTTTAAGGATTTCACTGGAAACCGGAATATCTTCAGGTAAAATCTAGACAGAGGCATTCTCGGAAACTTCTTCGTGATGTGCGTCCTCAACTAACAGAGTACAACCTGTCTTTTGATACATCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGAGGATATTTGGATAGCTCTAGCGATTTCGATGGATACGGGAATACCTTCATATGAAATCTAGACAGAGGCACTCTCAGAAACTGCTTTGTGATATCTGCATTCAAGTCACAGAGTTGAACATTCCCTTTCTTAGAGCAGGTTTGAAACTCTCTTTTTGTAGTATCTGGAAGTGGACACTTGGAGCGCTTTGACGCCTTTGGTGAAAAAGGAAATGTCTTCCCATAAAAACTAGACAGAAGCATTCTAAGAAACTTCTTTGGGATATATGTACTCAACTAACAGAGTTGAACCTTTCTATTTAGAGATCAGTTTTAAAAAGCTCTTTTTGTGGAATCCGCAAGTGGATATTTGAATAGCTCTGAGGATTTCGTTGGAGACGGGATTACGTATAAAAAGTAGACAGCAGCATTCTCAAAAGCTTCTTTGTGATC G 2 PASS SVTYPE=DEL;SVLEN=-3232;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:3,2,0,1:4 chr18 20626819 chr18-20626820-INS-4255 G GTCCCATAAAAACTAGACAGAAGCATTAGCAGAAAATTGTTTGTGATGTGTGCCCTCAACTCACAGAGTGGAACACTTCGTTTCACAGAGCAGTTTGGAAACACGCTTTTTGTAGAATTTGCATGTGGATATTTGGATAGCTTTGTGGATTTCGTTGGAAACGGAAGTATCCTCATATAAAAATTAGACAGAAACATTCTCAGAAACCGCTTTGTGATGTCTGCATTCACGTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTCTGTAGTATCTGGATGTGGACACTTGGAGCACATTGACGCTTACGGTAAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCACAAACTGGTTTGTGATGTATGTCCTCAACTAACAGCGTTGAACCTTTCTATTTACAGAGCAGTTTTGAAAGACTCTTTTTGGAGAATCTGTAAGCGGATATTTGGAGAGCTTCAAGGATTTCATTTTAAACCGTAATATCTTCAGGTAAAATCTAGCCAGAGGCATTCTCAGAAACTTATTTATGATGTGTGTCCTCAACTAACAGAGTACAACCTATCTTTTGATACAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTCGATAGCTGTAACGATTTCGTTGGAAATGGGAATACCTTCATATAAAATCTAGAGAGGCACTCTCCGAAAGTGCTTTGAGCTATCTGCTTTCAAGTCACAGAGTTGAACATTCCCTTTCTTAGAGAAGGTTTGAAACACTCTTTTTGTAGTATGTGTAAGTGGACACTTAGACCGCTTCGACCCCTTTGGTGAAAAAGGAAATGTCTTCCCATAAAAACTAGACAGAAGCATTCTAAGAAACTTCTTTGGGATATATGTACTCAACTAACAGAGTTGAACCTTTCTATTTCTGGGTCAGTTTTGAGAAGCTCTTTTTCTGTAATCTGCAAGTGGATATTCGGATAGCTCTGAGGATTTCCTTGGAAACGGGATTTCATATAAAATATAGACAGCAGCATTCTCAGAAGCTTCTTTGTGATGGTTGCTTTTAAGTCACAGAGTTGAATATTCCCTTCCATAGAGCAGGATTGAAACACTCTTTCTGTAGTATCCGGAAGTGGACATTTCGGGCGATTTCAGTCCTATGTTGAAAAAGGAAATATCATCCCATAAAAACTAGACAGAAGCATTCTCAGAAATTTCTTTGTGATGTGTGTCCTCAACTAACAGAGTTCAAACTGTCTTATGATACAGCAGTTTGGAAACACTCCTTTTGTAGAATATGCAAGTGGATATTTGGATAGCTCTAACTATTTCGTTGGAAACGGGAATATCTTCATATAAAATCTAGACACAAGCACTCTCAGAAACTACTTTCTGATATCTGCATTCAAGTCACAGAGTTGAATATTCCCTTTCTTAGAGCAGGTTTGAAACCGTCTTTTCGTGGAATCTGCAGGAGGATATTTGGATAGCTTTGAGGATTTCGTTGGAAAAGGGATTAAATATAAAAATAGAAAGCAGCATTCTCAGAAGCTTCTTTGTGATGTTTGCTTTTAAGTCACAGTGTTCAACATTCCCTTTCATAGAGCAGTTTTGAAACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGTGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCGATAAAAACTAGACAGAAGCATTCGCAGAAACTTGTTTGTGATATGTATCCTCAACTATCAGAGTTGAACATTTCATTTGACAGAGCAGTTTGGAAACACGCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAGCTTTGTGGATTTCCTTGGAAACGGGAGTATCTTCATATAAAACCTAGACAGAAACATTCTCAGAAACTGCTATATGATGTCTGCATTCACGTCACAGAGTTGATCATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTCTGTACTATCTGGATGTGGACACTTGGAGCGCTTTGACGCTTAAGGTGCAAAAGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCACAAACTGGATTGTGATGTTTGTCCTCAACTAACAGAGTTGAAACATTTTATTTGCAGAGCAGTTTTGAAAGACTGTTTTTGGAGAATCTTCAAGTGGATATTTGGAGAGCTTTAAGGAATTCATTGGAAACGGGAATATCTTCATATAAAATCTAGACAGAGGCATTCTCAGAAACTTCTTTGTGATGTGTGTCCTCAACTAACGGCGGTACATCCTGTCTTTTGATACAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCCAGTGGATATTTGCATAGCTCTAATGATTTCTTTGGAAACGGGAATACCTTCATATAAAATCTAGACAGAGGCACTCTCAGAAACTGCTTTGTGATATCTGCATTCAAGTCACACAGTTCAACATTCCCTTTCTTAGAGCAGGTTTGAAACACTCTTTTTGCAGGATCTGGAAGTGGACATTTGGAGCGCTTTGACGCCTTTGGTGATAAAGGAAATGTCTTCACATAAAAACTAGAAAGAAGCATTCTAAGAAACATCTTTGTGATATATGTACTCAACTAACCGAGTTGAACCTTGCTCTTTATAGATCAGCTTTTTAATGCTCTTTTTGTGGAATCTGCAAGTGGATATTTGGATAGCTTTCAGGATTTCGTTGGAAACGGGATTACAAACAAAATGTAGACAGCAGCATTCTCAGAAACTTCTTTGTGATGTTTGCTTTTAAGTCACAGAGTTGAACATTCCCTTCCATAGAGCAGTTTAGAAACACTCTTTCTATAGTATCTGGAAGTGGACATTTCGAGCGATTTCAGGCCTATGTTGAAAAACGAAATATCTTCCCATAAAAACTAGACAGTAGCATACTCAGAAGCTTCTTTGTGATGCTTGCTTTTAAGTCACAGAGTTGAACATTCCCTTTCGTAGAGCAGGTTTCAGACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGTGTTTTCAGGCCTATGGTGAACAAGGAAATATCTTCCCATAAAAACCAGACACAAGCATTTGCAGAAACTTGTTTGTGATGCGTGTCCTCAACTCACAGAATAGAACATTTCGTTTGACAGAGCAGCTTGGAAACACGCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAGCTTTGTGGATTTCGTTGGAAACGGGAGAATCTCCATATAAAACCTAGACAGAAACATTCTCAGAAACTGCTTTGTGATGTCTGCATTCACGTTACAGAGTTGAATATTCCCCTTCATAGAGCAGGTTTGATACACTCTTTCTGTAGTATCTGGATGTGGACACTTGGAGCGCTTTGACGCTTACAGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCACAAACTGGTTTGTGATGTATGTCCTCATCTAACAGAGTTGAACTTTTCTATTTACAGAGCAGTTTTGAAAGACTCTTTTTGGAGAATCTGCAAGTGGATATTTCGAGAGCTTTAAGGATTTCACTGGAAACCCGAATATCTTCAGGTAAAATCTAGACAGAGGCATTCTCAGAAACCTCTTTGTGATGTGTGTCCTCAACTAACAAAGTACTACCTGGCTTTTGATACAGCAGTTTGGAAACACTCTTTTTGTACAATCTGCAAGTGGATATTTGGATAGCTCTAAAGATTTCGTAGGAAACGGGAATACCTTCATATAAAATCTAGACAGAGGCACTCTCAGAAACTGCTTTGTGATATCTGCATTCAAGTCACAGTGTTGAACATTCCCTTTCTGAGAGCAGGTTTGAACCACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTGACGCCATTGGTGAAAAAGGAAATGTCTTCCCATAAAAACTAGACAGAAGCATTCTAAGAAACTTCTTTGGGATATATGTACTCAACTAACAGAGTTGAAACTTTCTATTTAGAGATCAGTTTTGAAAAGCTCTTTTTGTGGAATCTGCAAGTCGATGTTAGGATACCGCCGAAGATTTCGTTGGAGACGGGATTACATATAAAAATAGACAGCAGCATTCTCAGAAGCTTCTTTGTGATGTTTGCTTTTAAATCACAGAGTTGAATATTCCCTTCCATAGAGCAGGTTTGAAACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGCGATTTCAGGCCTATGTTGAAAAAGGAAATATCT 4 . ID=chr18-20626820-INS-4255;SVTYPE=INS;SVLEN=4255;TIG_REGION=h1tg017616l:42841-47095,h2tg016998l:42841-47095;QUERY_STRAND=+,+;HOM_REF=0,26;HOM_TIG=0,26;AC=2 GT:SUPP 1/1:1 -chr18 20629727 chr18-20629728-INS-171 G GACAGAAGCATTCTCAGAAACTTGTTTGTGCTGTGTGTACTCAACTGACAGAGCTGAACTTTTCTTTCTACACAGCAGTTTTGAAAAACTCTTTTTGTAGTATCTGCAAGTGGATAATTGGATGGCTTTAAGGATTTCGTTGGAAATGGGTCTACATTCATGTAAAATCTAC 4 . ID=chr18-20629728-INS-171;SVTYPE=INS;SVLEN=171;TIG_REGION=h1tg017616l:50003-50173,h2tg016998l:50003-50173;QUERY_STRAND=+,+;HOM_REF=0,13;HOM_TIG=0,22;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=175.2 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:1,2:3:1:2:4:0,1,1,1:7 -chr18 20630318 chr18-20630319-DEL-171 GAGACGATCTATTTGTAGTATCTGGTAGTGGACATTTGGAGCGCTTTGATGCCTTTGGTGAAAAAGGAAATATCTTCCATAAAAACTAGACAGAAGCATTCCAAGAATCTTCCTTGCGATATATGTACTCAACTACCAGAGTTGAACCTTTCTATTGATAGATCAGTTTTGA G 4 . ID=chr18-20630319-DEL-171;SVTYPE=DEL;SVLEN=-171;TIG_REGION=h1tg017616l:50765-50765,h2tg016998l:50765-50765;QUERY_STRAND=+,+;HOM_REF=0,1;HOM_TIG=0,1;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=175.3 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,0,1:5 +chr18 20629727 chr18-20629728-INS-171 G GACAGAAGCATTCTCAGAAACTTGTTTGTGCTGTGTGTACTCAACTGACAGAGCTGAACTTTTCTTTCTACACAGCAGTTTTGAAAAACTCTTTTTGTAGTATCTGCAAGTGGATAATTGGATGGCTTTAAGGATTTCGTTGGAAATGGGTCTACATTCATGTAAAATCTAC 4 . ID=chr18-20629728-INS-171;SVTYPE=INS;SVLEN=171;TIG_REGION=h1tg017616l:50003-50173,h2tg016998l:50003-50173;QUERY_STRAND=+,+;HOM_REF=0,13;HOM_TIG=0,22;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=175.2 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,2:3:1:2:4:0,1,1,1:7 +chr18 20630318 chr18-20630319-DEL-171 GAGACGATCTATTTGTAGTATCTGGTAGTGGACATTTGGAGCGCTTTGATGCCTTTGGTGAAAAAGGAAATATCTTCCATAAAAACTAGACAGAAGCATTCCAAGAATCTTCCTTGCGATATATGTACTCAACTACCAGAGTTGAACCTTTCTATTGATAGATCAGTTTTGA G 4 . ID=chr18-20630319-DEL-171;SVTYPE=DEL;SVLEN=-171;TIG_REGION=h1tg017616l:50765-50765,h2tg016998l:50765-50765;QUERY_STRAND=+,+;HOM_REF=0,1;HOM_TIG=0,1;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=175.3 GT:AD:DP:SAC:SUPP 1/1:2,1:3:1,1,0,1:5 chr18 20630319 pbsv.INS.368 A AAACCGTCTTTTCGTGGAATGTGCAGGAGGATATTTGGATAGCTTTGAGGATTTCGTTGGAAAAGGGATTACATATACAAAGTAGAAAGCAGCATTCTCAGAAGCTTCTTTGTGATGTTTGCTTTTAAGTCACAGAGTTGAACATTCCCTTTCATAGAGCAGTTTTGA 2 PASS SVTYPE=INS;SVLEN=167;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:0,2,1,0:4 chr18 20630623 pbsv.DEL.370 GAGTTGAATATTCCCTTCCATAGAGCAGGTTTGAAACCCTCTTTGTCTACTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCTATGGTGAACAAGGAAATATCGTCCCATAAAAACTAGACAGAAGCATTCGCAGAAACTTGTTTGTGATGTGTGTCCTCATCTCACAGAGGTGACCATTTCGTTTGACAGAGCAGTTTGGAAACACGCTTTTTGCAGAATACGCAAGTGGATATTTGGATAGCTGTAACGATTTCGTTGGATACGGGAATAACTTCATATAAATTCTAGACAGAGGCACTCTCAGAAACTGCTTTTTGATATCTGCATTCAAGTCACGGAGTTGAACATTCTCTTTCTTAGAGCAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGGGCTTTGACGCCTTTGGTGAAAAAGGAAATGTCTTCCCATAAAAACTAGACAGAAGCATTCTAAGAAACTTCATTGGGATATATGTACTCAACTTACAGAGTTGAAACTTTCTCTTTATAGATCAGTTTGGAAAAGCTCTTTTTGTGGAATCTGCAAACGGATATCAGGATAGTTCTGAGGATGTCGTTGGAGACGGGATTACATATAAAAAGTAGACAGCAGCATTCTCAGGAGCTTCTTTGTGATGTTTGCTTTTAAGTGACAGAGTTGAATATTCCCTTCCACAGAGCAGGTTTGAAACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGCGATTTCAGGCGTATGTGGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGGGTCCTCAACTAACAGAGTTCAACTTTTCTTATGATACAGCAGCTTGAAAACACACTTTTTATAGAATTTGCAACTGGATACATGGATAGCTCTAACTATCTCGTTGGAAACGGGAATATCTTCATATAAAATCTCCACAGAAGCATTCTCAGAAACTACTTTGTGATATCTGCATTCACATCACAGAGTTGAACATTCGCTTTCATAGAGCAGGTGTGAAACACTCTTTCTGCAGTATCTGGATGTGGACACTTGGAGCGCTTTGACGCTTACGGTGCAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCACAAACTGGTTTGTGATGTATGTCCTCAACTAACAGCGTTGAACCTTTCTATTTACAGAGCAGTTTTGAAAGACTCTTTTTGGAGAATCTGTAAGCGGATATTTGGAGAGCTTCAAGGATTTCATTTTAAACCGTAATATCTTCAGGTAAAATCTAGCCAGAGGCATTCTCAGAAACTTATTTATGATGTGTGTCCTCAACTAACAGAGTACAACCTATCTTTTGATACAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTCGATAGCTGTAACGATTTCGTTGGAAATGGGAATACCTTCATATAAAATCTAGAGAGGCACTCTCCGAAAGTGCTTTGAGCTATCTGCTTTCAAGTCACAGAGTTGAACATTCCCTTTCTTAGAGAAGGTTTGAAACACTCTTTTTGTAGTATGTGTAAGTGGACACTTAGACCGCTTCGACCCCTTTGGTGAAAAAGGAAATGTCTTCCCATAAAAACTAGACAGAAGCATTCTAAGAAACTTCTTTGGGATATATGTACTCAACTAACAGAGTTGAACCTTTCTATTTCTGGGTCAGTTTTGAGAAGCTCTTTTTCTGTAATCTGCAAGTGGATATTCGGATAGCTCTGAGGATTTCCTTGGAAACGGGATTTCATATAAAATATAGACAGCAGCATTCTCAGAAGCTTCTTTGTGATGGTTGCTTTTAAGTCACAGAGTTGAATATTCCCTTCCATAGAGCAGGATTGAAACACTCTTTCTGTAGTATCCGGAAGTGGACATTTCGGGCGATTTCAGTCCTATGTTGAAAAAGGAAATATCATCCCATAAAAACTAGACAGAAGCATTCTCAGAAATTTCTTTGTGATGTGTGTCCTCAACTAACAGAGTTCAAACTGTCTTATGATACAGCAGTTTGGAAACACTCCTTTTGTAGAATATGCAAGTGGATATTTGGATAGCTCTAACTATTTCGTTGGAAACGGGAATATCTTCATATAAAATCTAGACACAAGCACTCTCAGAAACTACTTTCTGATATCTGCATTCAAGTCACAGAGTTGAATATTCCCTTTCTTAGAGCAGGTTTGAAACCGTCTTTTCGTGGAATCTGCAGGAGGATATTTGGATAGCTTTCAGGATTTCGTTGGAAACGGGATTACAAACAAAATGTAGACAGCAGCATTCTCAGAAACTTCTTTGTGATGTTTGCTTTTAAGTCACAGAGTTGAACATTCCCTTTCATAGAGCAGTTTAGAAACACTCTTTCTATAGTATCTGGAAGTGGACATTTCGAGCGATTTCAGGCCTATGTTGAAAAACGAAATATCTTCCCATAAAAACTAGACAGTAGCATACTCAGAAGCTTCTTTGTGATGCTTGCTTTTAAGTCACAGAGTTGAACATTCCCTTTCGTAGAGCAGGTTTCAGACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGTGTTTTCAGGCCTATGGTGAACAAGGAAATATCTTCCCATAAAAACCAGACACAAGCATTTGCAGAAACTTGTTTGTGATGCGTGTCCTCAACTCACAGAGTTGAACATTTCGTTTGACAGAGCAGCTTGGAAACACGCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAGCTTTGTGGATTTCGTTGGAAACGGGAGAATCTCCATATAAAACCTAGACAGAAACATTCTCAGAAACTGCTTTGTGATGTCTGCATTCACGTTACAGAGTTGAATATTCCCCTTCATAGAGCAGGTTTGATACACTCTTTCTGTAGTATCTGGATGTGGACACTTGGAGCGCTTTGACGCTTACAGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCACAAACTGGTTTGTGATGTATGTCCTCATCTAACAGAGTTGAACTTTTCTATTTACAGAGCAGTTTTGAAAGACTCTTTTTGGAGAATCTGCAAGTGGATATTTCGAGAGCTTTAAGGATTTCACTGGAAACCCGAATATCTTCAGGTAAAATCTAGACAGAGGCATTCTCAGAAACCTCTTTGTGATGTGTGTCCTCAACTAACAAAGTACTACCTGGCTTTTGATACAGCAGTTTGGAAACACTCTTTTTGTACAATCTGCAAGTGGATATTTGGATAGCTCTAAAGATTTCGTAGGAAACGGGAATACCTTCATATAAAATCTAGACAGAGGCACTCTCAGAAACTGCTTTGTGATATCTGCATTCAAGTCACAGTGTTGAACATTCCCTTTCTGAGAGCAGGTTTGAACCACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTGACGCCATTGGTGAAAAAGGAAATGTCTTCCCATAAAAACTAGACAGAAGCATTCTAAGAAACTTCTTTGGGATATATGTACTCAACTAACAGAGTTGAAACTTTCTATTTAGAGATCAGTTTTGAAAAGCTCTTTTTGTGGAATCTGCAAGTCGATGTTAGGATACCGCCGAAGATTTCGTTGGAGACGGGATTACATATAAAAATAGACAGCAGCATTCTACGAAGCTGCTTTGTGATGTTTGCTTTTAAGTCACAGAGTTGAACATTCCCTTACAGAGAGCAGGTTTGAAACACTCTTTATGTAGTATCTGGAAGAGGACATTTCGAGCGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCGCAGAAACTTGTTTGTGATATGTGTCCCAAACTCACAGACTTGAACATTTCGTTTGACAGAGCAGTTTGGAAACACGCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAGCTTTGTGGATTTCGTTGGAAATGGGAGTATCTTCATATAAAACATAGACAGAAACATTCTCAGAAACTGCTTTGTGATATCTCCATTCACGTCACAGAGTTGAACATTCCCTTTCATAGAGCAGGTTTGAAAGACTCTTTCTGTAGTATCTGGATGTGGACACTTGGAGCGCTTTGACGCTTACGGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCACAAACTGGTTTGTGATGTAGGTCCTCAACTAACAGAGTACAACCTGTCTTTTGATACAGCAGTATTGAAACACTCTTTCTGTAGAATCTGCAATTGGATATTTGGATAGCTCTAACGATTTCGTTGGAAACGGGAATACTTTAATATAAAATCTAGACAGACGCACTCTCAGAAACTGCTTTGTGATATGTCAATTCAAGTCACAGAGTTGAACATTCCCTTTCTTAGAGCAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTTACGCCTTTGGTGATAAAGGAAATGTCTTCACATAAAAACTAGACAGAAGCATTCTAAGAAACTTCTTTGGGATATATGTACTCAACTAACCGAGTTGAACCTTGCTCTTTATAGATCAGCTTTTTAATGCTCTTTTTGTGGAATCTGCAAGTGGATATTCGGATAGCTCTGAGGATTTCGTTGGAGACGGTATTACATATAAAAAGTACACAGCAGCATTCTCAGAAGCTTCTTTGTGATGTTTGCTTTTAAGTCACAGAGTTGAATATTCCCTTCCATAGAGCAGGCTTGAAACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGCGCTTTCAGGCCTGTGTTGAAAAAGGAAACATCTTCCCAAAAAAACTAGACAGAACCATACTCAGAAACTTCTTTGTGATGTGGGTCCTCAACTAACAGAGTTCAACAATTCTTATGATACAGGAGCTTGGAAACACCCTTTTTATAGAATTTGCAACTGGATATATGGATAGCTTTAACTATTTCGTTGGAAACGGGAATATCTTCATATAAAACCTAGGCAGAAGCACTCTCAGAAACTTCTTTGTGATATCTGCATTCATATCACAGAGTTGAATATTCCCTTTCTAAGAGCGGGTTTGAAACCGTCTTTCTGTGGAATCTGCAGGACGATATTTGGATAGCTTTGAGGATTTCGTTGGAAACGGGATTACACATACAAAGTAGACAGCAGCATTCTCAGAAGCTTCTTTGTGATGTTTGCTTTTAAGTCACAGA G 2 PASS SVTYPE=DEL;SVLEN=-5275;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,0,1:4 chr18 20630879 chr18-20630880-DEL-680 TTCGTTGGATACGGGAATAACTTCATATAAATTCTAGACAGAGGCACTCTCAGAAACTGCTTTTTGATATCTGCATTCAAGTCACGGAGTTGAACATTCTCTTTCTTAGAGCAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGGGCTTTGACGCCTTTGGTGAAAAAGGAAATGTCTTCCCATAAAAACTAGACAGAAGCATTCTAAGAAACTTCATTGGGATATATGTACTCAACTTACAGAGTTGAAACTTTCTCTTTATAGATCAGTTTGGAAAAGCTCTTTTTGTGGAATCTGCAAACGGATATCAGGATAGTTCTGAGGATGTCGTTGGAGACGGGATTACATATAAAAAGTAGACAGCAGCATTCTCAGGAGCTTCTTTGTGATGTTTGCTTTTAAGTGACAGAGTTGAATATTCCCTTCCACAGAGCAGGTTTGAAACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGCGATTTCAGGCGTATGTGGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGGGTCCTCAACTAACAGAGTTCAACTTTTCTTATGATACAGCAGCTTGAAAACACACTTTTTATAGAATTTGCAACTGGATACATGGATAGCTCTAACTATC T 4 . ID=chr18-20630880-DEL-680;SVTYPE=DEL;SVLEN=-680;TIG_REGION=h1tg017616l:51156-51156,h2tg016998l:51156-51156;QUERY_STRAND=+,+;HOM_REF=0,8;HOM_TIG=0,2;AC=2 GT:SUPP 1/1:1 @@ -610,8 +610,8 @@ chr18 20743346 pbsv.DEL.394 ACCGTCTTTTCGTGGAATCTGCAGGAGGATATTTGGATAGCTTTGAGGATTT chr18 20744160 chr18-20744161-INS-680 A AGAGTCGAACATTCCCTTTCTTAGAGCCGGTTTGAAACCGCCTTTTCTTGGAATCTGCAGGTGGATATTTGGATAGCTTTCAGGATTTCTTTGGAAACGGGATTACATATACAACTTAGACAGTAGCATTCTCAGAAGCTTCTCTGTGACGTTTGCTTTTAAGTCACAGCGTTGAGCATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTCTGTCGTATCTGGAAGTGGACATTTCGAGGGCTTTCAGGCCTACGGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGTCCTCAACTAACAGAGTTGAACCTTTCTTTTGATACAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTCGGATAACTTTGAAGATTTCGTTGGAAACGGGAATATCTTCATGTAAAATCGAGACAGAAGCATTCTCAGAAACTGCTTTGTGATGTGAGTCCTCAAGTAACACAGTACAACCTGTCTTTTGATACAGCAGTTTGGAAACACTCTGTCTGTAGAATCTGCAAGTGGATATTTGGATAGCTCAAGCTATTTCGTTGGAAACGGGAATAGCTTCATATAAACTCTAGAGAAAAGCACCATCAGAAAATACATTTTGATATCTGTATTCAAGTCACG 4 . ID=chr18-20744161-INS-680;SVTYPE=INS;SVLEN=680;TIG_REGION=h1tg016261l:35881-36560;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1 GT:SUPP 1/0:1 chr18 20745056 chr18-20745057-DEL-167 TCTTGGAATCTGCAGGTTGATATTTGGATAGCTTTCAGGATTTCGTTGGAAACGGGATTACATATACAAAGTAGACAGTAGCATTCTCAGAAGCTTCTCTGTGATGTTTGCTTTTAAGTCACAGAGTTGAGCATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTC T 4 . ID=chr18-20745057-DEL-167;SVTYPE=DEL;SVLEN=-167;TIG_REGION=h1tg016261l:34986-34986;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 chr18 20747345 pbsv.DEL.395 ATCCATGGTGTATATGGGCCCATTTCCTTAATCCAGTCTATCATTGTTGGACATTTGGGCTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCACCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAA A 2 NearReferenceGap SVTYPE=DEL;SVLEN=-180;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:1,1,1,1:4 -chr18 20747345 chr18-20747346-DEL-191 ATCCATGGTGTATATGGGCCCATTTCCTTAATCCAGTCTATCATTGTTGGACATTTGGGCTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCACCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCT A 4 . ID=chr18-20747346-DEL-191;SVTYPE=DEL;SVLEN=-191;TIG_REGION=h1tg016261l:32864-32864;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=197.0 GT:DR:DV:GQ:SUPP 0/1:1:2:4:3 -chr18 20747696 chr18-20747697-DEL-102 AAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN A 4 . ID=chr18-20747697-DEL-102;SVTYPE=DEL;SVLEN=-102;TIG_REGION=h1tg016261l:32693-32693;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=197.1 GT:DR:DV:GQ:SUPP 0/1:1:2:4:3 +chr18 20747345 chr18-20747346-DEL-191 ATCCATGGTGTATATGGGCCCATTTCCTTAATCCAGTCTATCATTGTTGGACATTTGGGCTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCACCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCT A 4 . ID=chr18-20747346-DEL-191;SVTYPE=DEL;SVLEN=-191;TIG_REGION=h1tg016261l:32864-32864;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=197.0 GT:DR:DV:GQ:SUPP 1/0:1:2:4:3 +chr18 20747696 chr18-20747697-DEL-102 AAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN A 4 . ID=chr18-20747697-DEL-102;SVTYPE=DEL;SVLEN=-102;TIG_REGION=h1tg016261l:32693-32693;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=197.1 GT:DR:DV:GQ:SUPP 1/0:1:2:4:3 chr18 20749312 chr18-20749313-INS-342 T TACAAACTGGTCAGAAGCATTCTCACAAACCGGTTTGGGATGTATGTCCTCAGCTAAAAGAGTACAGCCTGTCTTTTGATACAGCAGTATTGAAACACTCCTTCTGTAGAATCTGCATGTGGATATTTGGATAGCTCTAACGATTTCGTTGGAAACGGGAATACTTTAGTATAAAATCTAGACAGAGGCACTCTCAGAAACTGCTTTGTGATATGTGCACTCAATTCACAGAGGTGAACATTCCCTTTATTAGAGCAGGTTTGAAACACTCTTTTCGTAGTATCTGGAAGTAGACATTTGGAGTGCTTTGACGCCTTTGGTGAAAAAGGAAATATGTTCAGTA 4 . ID=chr18-20749313-INS-342;SVTYPE=INS;SVLEN=342;TIG_REGION=h1tg016261l:30836-31177;QUERY_STRAND=-;HOM_REF=0,1;HOM_TIG=0,1;AC=1 GT:SUPP 1/0:1 chr18 20750498 Sniffles2.DEL.2C8S11 TTAGTATAAAATCTACACACAGGCACTCTCAGAAACTGCTCTGTGATATGTGCATTCAAGTCACAGAGTTGAACATTCCCTTTATTAGAGCAGGTTTGAAACACTCTTTTTGTAGTATCTGGAAGTGGACATTTGGAGCGCTTTGACGCCTTTGCTGAAAAAGGAAATATCTTCTCTTCAAAACTAGACAGAAGCATTCCCAGAAACTTCTTTGTGATGTGTGTCCTCAACTAACAGAGTTCAACCTCTCTTATGATACAGTAGTTTGGAAACACTCTTTTTATAGTATATGCAAGGGGATATTTGGATAGCTCGAAGTATTTCGTTGGAAACGGGAATATCTTCATATAAAATCTAGACAGAAGCACTCTCAGAAACTACTTTGTGATATCTGCATTCAAGTCACAGAGTTGAATATTCCCTTTCTTAGAGCAGGTTTGAAACCGTCTTTTCTTGGAATCTGCAGGTTGATATTTGGATAGCTTTCAGGATTTCGTTGGAAACGGGATTACATATACAAAGTAGACAGTAGCATTCTCAGAAGCTTCTCTGTGATGTTTGCTTTTAAGTCACAGAGTTGAGCATTCCCTTTCATAGAGCAGGTTTGAAACACTCTTTCTGTAGTATCTGGAAGTGGACATTTCGAGGGCTTTCAGGCCTATGGTGAAAAAGGAAATATCTTCCCATAAAAACTAGACAGAAGCATTCTCAGAAACTTATTTGTGATGTGTGTCCTCAACTAACAGAGTTGAACCTTTCTTTTGATACAGCAGTTTGGAAACACTCTTTTTGTAGAATCTGCAAGTGGATATTTGGATAACTTTGAACATTTCGTTGGAAGCGGGAATATCTTCATGTAAGATCGAGACAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGTGTAGTTTTTATGGGAAGATACTTCCTTTTTCACCGTAAGCATCAAAGCGCTCCAAGTGTCCACATCAAGATACTACAGAAAGAGTGTTTCTGGGATTGTAAAGTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGGTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAGCCCAAATGTCCAACAATGATAGACTGGATTAAGGAAATGTGGCCCATATACACCATGGAATACTATGCAGCCATAAAAAATGATGTGTTCATATCATTTGTAGGGACATGGATGAAATTGGAAAATATCATTCTCAGTAAACTATCGCAAGAACAAAAAACGAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATGTCACACTCTGGGGAATGTGGTGGGGTCGGGGGATGGAGGGAGGGATAGCATTGGGAGATATGCCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCAGATGTATACATATGTAACTAACCTGCACAATGTGCACATGTACCCTAAGCTTAGAGTATAATAAAAAAAAAAAAAGCATTCTCACAAACTGGTTTGTGATGTATGTCCTCAGCTAACAGAGTTGAAACTTTCTATTTACAGAGCAGTTTGGAAAGACTCAATTGGAGAATCTGCAAGTGGATATTTGGAAAGCTTTAAGGATTTCATTGGAAACCGGAATATCTTCAGGTAACATCTAGACAAGGGCATTCTCAGAAACGTCTTTGTGACCTGTGTACTCAAGTAACAGAGTACAACCTGTCTTTTGATACAGCATTTTGGAAACACTCATTCTGTAGAACCTGCAAGTGGATATTCGGATAGCTCAAGCTATTTCGTTGGAAACGGGAATAGCTTCATATAAACTCTAGACAGAAGCACTGTCAGAAACTACTTTCTGATATCTGTATTCAAGTCACAGAGTTGAATATTCCCTTTCTTAGAGCAGGTTTGAAACCGTCTTTTCGTGGAATCTGCAGGAGTATATTTGGATAGCTTTGAGGATTTCGTTGGAAACGGGATTACATATACAAAGTAGACAGCAGCATTCTCAGAAGCTGCTTTGTGATGTTTGCTTTTAAGTCACAGAGTTGAACATTCCCTTTTATAGAGCAGGTTTCAAACACTCTTTCTGTAGTATCTGGAAGAGGACATTTCGAGCGCTTTCAGGCCTATGGTGAACAAGGAAATATCTTCCCATACAAACTTTTCAGAAGCATTCCCACAAACTGGTTTGGGATGTATGTCCTCAGCTAACAGAGTACAACCTGTCTTTTGATACAGCAGTATTGAAACACTCTTTCTGTAGAATCTGCGAGTGGATATTTGGATAGCTCTAACGATTTCGTTGGAAACGGGAATACAT T 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-2509;SUPPORT=2;COVERAGE=3,3,3,3,3;STRAND=+-;AF=0.667;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:4:1:2:2 chr18 20751477 chr18-20751478-DEL-645 AGTTTTTATGGGAAGATACTTCCTTTTTCACCGTAAGCATCAAAGCGCTCCAAGTGTCCACATCAAGATACTACAGAAAGAGTGTTTCTGGGATTGTAAAGTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAATCATGGTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAGCCCAAATGTCCAACAATGATAGACTGGATTAAGGAAATGTGGCCCATATACACCATGGAATACTATGCAGCCATAAAAAATGATGTGTTCATATCATTTGTAGGGACATGGATGAAATTGGAAAATATCATTCTCAGTAAACTATCGCAAGAACAAAAAACGAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATGTCACACTCTGGGGAATGTGGTGGGGTCGGGGGATGGAGGGAGGGATAGCATTGGGAGATATGCCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCAGATGTATACATATGTAACT A 4 . ID=chr18-20751478-DEL-645;SVTYPE=DEL;SVLEN=-645;TIG_REGION=h1tg016261l:28672-28672;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 @@ -647,17 +647,17 @@ chr18 22017600 pbsv.INS.409 A ACTGCAACATCTGCCTCCTGGGTT 2 PASS SVTYPE=INS;SVLEN=2 chr18 22025178 pbsv.INS.410 A ATATATATATATATATATATATTTTTT 2 PASS SVTYPE=INS;SVLEN=26;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:1,3,2,1:4 chr18 22078553 pbsv.DEL.411 TTTTTCTTTCTTTCCTTCCTTCCTTCCTTC T 2 PASS SVTYPE=DEL;SVLEN=-29;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:2,0,1,0:4 chr18 22081097 pbsv.DEL.412 CAAAACCCCGTCTCTACTAAAAATA C 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,1,0:4 -chr18 22091026 chr18-22091027-INS-316 T TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCAGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATTTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGAGCCCGGCAACA 4 . ID=chr18-22091027-INS-316;SVTYPE=INS;SVLEN=316;TIG_REGION=h1tg016191l:45233-45548;QUERY_STRAND=-;HOM_REF=0,9;HOM_TIG=0,9;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=211.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,3:6:3:3:21:1,2,1,2:7 -chr18 22125189 chr18-22125190-INS-332 A AAAAAACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC 4 . ID=chr18-22125190-INS-332;SVTYPE=INS;SVLEN=332;TIG_REGION=h1tg016191l:10760-11091;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=212.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,5:8:3:5:16:3,0,3,2:7 +chr18 22091026 chr18-22091027-INS-316 T TTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCAGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATTTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGAGCCCGGCAACA 4 . ID=chr18-22091027-INS-316;SVTYPE=INS;SVLEN=316;TIG_REGION=h1tg016191l:45233-45548;QUERY_STRAND=-;HOM_REF=0,9;HOM_TIG=0,9;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=211.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:3,3:6:3:3:21:1,2,1,2:7 +chr18 22125189 chr18-22125190-INS-332 A AAAAAACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCC 4 . ID=chr18-22125190-INS-332;SVTYPE=INS;SVLEN=332;TIG_REGION=h1tg016191l:10760-11091;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=212.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:3,5:8:3:5:16:3,0,3,2:7 chr18 22231968 chr18-22231969-INS-1407 C CCATCCATCCATCCACCCTTCCACCCATCCACCCACCCATCCATCCATCTGTCCATTCGTCCATCCATCCATCCATCCATCCATACATCCATCCGTCCACTCATCCATCCATCCACTCATCCATCTACTCATCCATCCATCCATCCATCCACCCATCCATCCATCCATCCACTCATCCATCCATACATACATACATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATATATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCATCCATACATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCTACTCATCCATCCATCCATCCATCCATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCACTCATCCATCCATCCATACATACATACATCCATACATACATCTATCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACGTCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATCTATCCATACATACCTACATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCGTCCATCCACTCATCCATCCATCCATCCACACATACATCTATCCATACATACCTACACACATACATCTATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCATCCACT 4 . ID=chr18-22231969-INS-1407;SVTYPE=INS;SVLEN=1407;TIG_REGION=h2tg007583l:29439-30845;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,14;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=213.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,10:13:8:5:27:1,2,6,4:7 -chr18 22231984 chr18-22231985-INS-284 C CCACCCTTCCACCCATCCACCCACCCATCCATCCATCTGTCCATTCGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCACTCATCCATCTACTCATCCATCCATCCATCCATCCACCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATACATACATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATA 4 . ID=chr18-22231985-INS-284;SVTYPE=INS;SVLEN=284;TIG_REGION=h1tg016710l:50114-50397;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=213.1 GT:DR:DV:GQ:SUPP 0/1:8:5:27:3 -chr18 22232129 chr18-22232130-INS-76 C CATCCATCCATCCATCCACTCATCCATCCATCCATACATACATACATCTATCCATACATACCTACATACATACATCT 4 . ID=chr18-22232130-INS-76;SVTYPE=INS;SVLEN=76;TIG_REGION=h1tg016710l:50547-50622;QUERY_STRAND=+;HOM_REF=0,17;HOM_TIG=0,17;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=213.2 GT:DR:DV:GQ:SUPP 0/1:9:4:14:3 -chr18 22232356 chr18-22232357-INS-903 C CTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCCATACATACATCTATCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACGTCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATACATCCATACATACATCTATCCATACATACCTACATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCGTCCATCCACTCATCCATCCATCCATCCACACATACATCTATCCATACATACCTACACACATACATCTATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATA 4 . ID=chr18-22232357-INS-903;SVTYPE=INS;SVLEN=903;TIG_REGION=h1tg016710l:50858-51760;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=213.3 GT:DR:DV:GQ:SUPP 0/1:10:3:2:3 +chr18 22231984 chr18-22231985-INS-284 C CCACCCTTCCACCCATCCACCCACCCATCCATCCATCTGTCCATTCGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCACTCATCCATCTACTCATCCATCCATCCATCCATCCACCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATACATACATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATA 4 . ID=chr18-22231985-INS-284;SVTYPE=INS;SVLEN=284;TIG_REGION=h1tg016710l:50114-50397;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=213.1 GT:DR:DV:GQ:SUPP 1/0:8:5:27:3 +chr18 22232129 chr18-22232130-INS-76 C CATCCATCCATCCATCCACTCATCCATCCATCCATACATACATACATCTATCCATACATACCTACATACATACATCT 4 . ID=chr18-22232130-INS-76;SVTYPE=INS;SVLEN=76;TIG_REGION=h1tg016710l:50547-50622;QUERY_STRAND=+;HOM_REF=0,17;HOM_TIG=0,17;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=213.2 GT:DR:DV:GQ:SUPP 1/0:9:4:14:3 +chr18 22232356 chr18-22232357-INS-903 C CTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCCATACATACATCTATCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACGTCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATACATCCATACATACATCTATCCATACATACCTACATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCGTCCATCCACTCATCCATCCATCCATCCACACATACATCTATCCATACATACCTACACACATACATCTATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATACATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATACATACATCCATACATACATCTATCCATACATACCTACATACATACATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCACTCATCCATCCATCCATCCATCCATA 4 . ID=chr18-22232357-INS-903;SVTYPE=INS;SVLEN=903;TIG_REGION=h1tg016710l:50858-51760;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=213.3 GT:DR:DV:GQ:SUPP 1/0:10:3:2:3 chr18 22256072 pbsv.DEL.416 GAAAATAAAATAAAATAAAAT G 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,3,3:4 chr18 22273899 pbsv.DEL.417 CCTTCCTCCTCCTCTTCCCTCCTC C 2 PASS SVTYPE=DEL;SVLEN=-23;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,2:2:0,0,2,0:4 chr18 22452203 chr18-22452204-INS-795 C CCCCAGTCTCACCCCCAGCCCCAGCCCCAGCCCCAGCCCCACCCCCGCCCCGCCCCAGCCCCACCCCCAGCCGCCGCCCCCAGCCCCAGCCCCAGCCCCCGCCCGCAGCCCCAGCCCCCGCCCCCGCCCCAGCCCCCGCCCCCGCCCCCAGCCCCACCCCCAGCCCCAGCCCCAGCCCCACCCCCACCCCCAGCCCCAGCCCCAGCCCCACCCCCACCCCCAGCCCCAGCCCCAGCCCCACCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCACCCCCACCCCCTCCCCCAGCCCCAGCCCCAGCCCCGCCCCCAGCCCCAGCCCCACCCCCAGCCCCAGCCCCGCCCCCGCCCCAGCCCCACCCCCAGCCCTCTAAGGGTGTGCATGACAGCGCTGCCCTCTGCAAAAAGGTGAAATGCAAGAGGCAGTTTAAGATAGCTCTTCCACACAGAGTTGGAACATTTTCAACCCAGAGTGTGACTTCCCCGCAGCCCTGGCCCAGGCCCTCTCACAAGGAGGAGGCCAGGAGCACGTGCAACTGAACAAGCTGTGAAGCCAGCCGGGCACAGAACCCCCGGGGTGGAAGGCTCCCCTGTGAAAATGCAAGAGGAAAGGCGCAAAGGTTAGTCCCACTGGCAGGGAGAAGATAAGGTCGGGGGGTGGAGAAGGAGAAAGGCGGAGTCAGCCAAAGGCAACAACAGGCCTTTCACAAATGCCTCAGAGCAACAGTGGGGAGGAGGAAGAAATAAGCCCATTAATAAACGAGAAGGGAAGGAAATGACTGCTTCAAGA 4 . ID=chr18-22452204-INS-795;SVTYPE=INS;SVLEN=795;TIG_REGION=h1tg006114l:88324-89118,h2tg009478l:179219-180013;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=214.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,8:8:.:8:22:0,0,5,3:7 chr18 22550725 chr18-22550726-INS-5693 A ATAGTGATGGTAATGCAACATAGTTAGAATCACTGTCTGTGTGCTTCCATTTGCCCATCTAGACTTTGAGCTTTGGGATGCAGGAATCCCTGAACCCCCTCTACCAAGCATACTGCTGGACCCATTAAAGGTGCCCAATAAATGTGTGTTCAACTCAACGTGACCATGCTGTCCAGACTTGTGGGTAGATGCTTAGCTTTAACATGACTAGTCACCTTTCTGCCAAGGAGAATAAAGTGTTTCATGTTTCTTGCCTTTCTCCTTTCTCATAGCAGTGGGTAGGTGAAACAGGGGCACATCCACAATATGGAAATTAGAAACTTAAAGGGACACAAAAATTTAGGGTTTGTCTAGGATCACACATGGCACATTCATCGCCAAAGTCCTGATGTGCAGGTCTGAGGGTCTTTCAACAGCGTAGCCTGTCATCCCAGGTAAGAACGGCAATAATATCTAACTTACTAATGCATAGTTTATATTGTCTCCCAGAAAGATGATTGCTGCATTTTTTGTGTTGCCATGCTCTCTTTAAAATAATACTATAATACATAGTATTGTTTTATAGTATTATTTTATAATAAATAGTATTTATTTATAGGTTTATTTTATAATAATTAGATAAATACAACCATTTTTTAGAGTTGAGGGCCAAACAGTAAGCATGGTCAACAAACAGACAAACAAATACATTCTTATTGTTCTCAGTTTCTTTCCTCTTCCTAAAGTGGGAATTGGAATTTATCTTCTGGCTGAAGATTCCCACAATTTATAACTGAAGTCGTTCAACGTCAACCATGAGCAATCCTTGGACTCTACTATAGGATGGCCCTTATTGAGACCTTAGGTGTACTTCTGTTTAAATTTTGTGATTAGAAACATAAAATCAATCATAGTGAAACCCAGTAGACTTGGTGATCTGAGAGGGATTTTGTTTCTAGTACTTGAGTTGATTTATTTCTCTGTTTGTTTATTTATACAAAATTGCCTTAGATTTATTCCCACTGACAATGAATTTAAAGTATTTAGGAAAACTTTGCTAAAGTTTCCTGAACACGTTGGATCAGGGGACTGGAACGGGGCGGTTAATTTCTTTCCTTTACCCTACTTTTCTCTTCTTCTTTCTCCTCTTTCTTCTTTTTCTCTCCTAATCAGAGTCACAGGGAGAAATGCTGGAAGAGAGAGCACTTAAGCCCATTTGGAAAAGTGTTTCTGCTCCTATATTCTTGGGATCTGTGAACGCATAAAGCTGCTAATAACAGGATTTGTGGGAAAGAAGTAAAGAGCTATTTCTCATGATGAATTTGGGTTGAGTCATCAAGAGAAAGCATAACATTTTATTATGAATGACTACACCTGTATTAGTCTTTTTCACACTGCTATAAAGAATACCTGAGACTGGGTAATTTATAAAGGAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGGAGACCTCAGGAAACTTACAATCATGGCAGAAGGTGAAGGGGAAACAGGCACATCTTACGTAGCAGCAGGAGAGAGAGAGAGCAGAGAGAGGGGAAACTTCCATTTATAAAACCTCCAGATCTCATGAGAACTCACTCACTATCACAAGAACAGCATAGGGGAAACCTCCTCTTAGTGTGCATGCTTAAGTCACTTGCCCAGCTCCTGAGATTTTATCGGGAAGCAGATGATTACCAGATTTAGGTTTTTCCTATCTATGTGGAGACTGCCTTTCCCTGGTGCTGACTGCAGCTAATTATTATTTTAGAGAGACAGTTAACAACTGCCTGACCATCATCACCTGATGGTTGCTGGACATCCGTGGTATGTTAGGGGAAATGGGAGGCCTCTCCTGCACTGCCCTGCTCATGTCTCACTAGCTACCTACCATAACACATGGATTCCAGTTTCTGGCCTGTATCATTTTTCCTCTCCATAAAGAGCTTCTTTCAACTTTCTTACAGGGCTGATCTGCTGGAGACGAATTCCCTCATTTTTGTTTGTCTAAGAAGGTCTTTATTTCTCCTTCGCTTTAAAAAAAAGCATATACTATATTTTAGAGCAGTTTTAGATTTACAGAAAAATTAACAGAGAGTACACAGTTTCCTCCGTCACTTCCATCCACACACAGTTTCCCTTATCAACGTTTTGCATTGGTATGATACATTTGTTACAATGAAAAACCAATACTGATACATTATTACATCCCTAGTTTACATTAGAACTCACTCTTTGCATTGTACATATTTTTGGATGTGAGGAATGCCTAATGGCAGGTATCCACCACAGTATGGTGCAGAGTAGTTTCACTGCGCTAAAAACCCTTTGTGCTTCCTTTATTCATCCGTCTCCTTTTCCCTTTCCCACCCCACGTCCCACCCCTTGCAATTACTGCTCCTTTTACTGGCTCTATCATTTTGCCTTTTCCAGTATGTCATATAGTTGGTATCACATAGAATGTAGCTTTTCAGACTGACTTATGTTACTTAGCAATGTGTATTTAAAATTCCTCCAATGTCTTTTCACGGTTTGAAAGCTCATTTCTTTTTTAGCACTGAATAATATCCCCTTATGCAGATGTACCACAGTTTGTTTATCCACTTGCTTATTTAAGGACATACTGGTTGCCTCCCATTTTTGGCAACTATGAATAAAGCTGCTGTAAACATTTATGCACGGACTTTTGTGTGGACATAGCTTTCAACTCATTGGAATAAATACCTAGAAGCATCGTCACTGGATTGTATGGTAGACTATGCTTAGCTTTATAAGAAATTGCCAAACTGTCTTCCAAAATGATTGTACCATTTTGTATTTCCACCAGCAATGAATGAGAGCTCCTATTGCTTCACAACTTCGCAGCATTTGGCATTGTCAGTGTTTTGGATTTTTGCCACTCTATAAGTGGTACCCCATTGTTGTTTTAATTTGCAATTCCCTAAAGTGCATCTTTTCATATGCTTATTTGCCATCCGTATATCCCCTTTGGTGAAATGTCTGTTAGGTCTTTTACCCACCTTTTAGTTGAGTTGTTTGTTTCCTTATGGTTGAGGTTTAGCAGTTCTTTGTATATTTTAGCTACAAACCCTTTATGAGACATATGTTTCACAAATATTTTCTCTCGGTCTGTGGCTTGGGTTGTCTTTTCATTCTCTTAATTTCCTTCACTTTTGAAGAATAGTTTATAGAACTCTAGATTGGTGGATTTTTTTTTCTTTTAACACATTAAATATTTCACCCTACTCTCTTGTTGTTCACATGGTTTCTGATGAGTAGTCCAATGGAATTTTTATGCTTGTTCCACTGTGGGTAAGGTGTAAGGTGTTCTTATTTCTTTGGCTTCTTTCAGGATTTTCTGTTTGTCTTTGGTTTTCTGCTTTCTTTTTTTTTTCTTTTTTTGAGATGGAGTTTCACTATTGTTGCCCAGGCTGGAGTGCAATGGCAAGATCTCGACTCACTGCAACCTCTGCCTTCCGGGTCCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCACCCGCCACCACGCCCAGCTAATTTTTTGCATTTTTAGTAGAGATGGGGTTTTACTATGCTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTACCAGGATTACAGGCATGAGCCACTGCGCCCAGCCCTGCAATTTAAATATGATATGTCAAGATGTATACTTTTTTATTTTTTCTTTCTTTTTTTTTTTTTTTTTAGACAGGGTCTCACTCTCATCACCCAGGCTAGAATGTAGAGGTGTGATCACAGCTCACTGCAACCTCGACCACCCAGGCTCAGGTGATTCTCCTGCCTCAGCCTTCCCAGTAGTTGGAACTACAGTCACATACCACCACACCCGGTTAATTTTTTGTATTTTTTGTAGACACAGGGTTTCACCATGTTGCCCTTTCTGGTCTCAAACTCCTGTGCTCCGGTGATCCTCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACCTGCATAGCCACTGTGCTCAGCCAGTGCATACTTTTTTATATATACCCTACTTAGTGTTCTCTAAGCTTCCTAAATCTGTGTTAGATGAGACAGGAGCCTGGGGGATCAGGAGCTATGAATATTAATTGTAGTATAAAACTGTTTGTTTTGGACCTAATTTTGTATTATCTGCTGCTGTAAGCAGTGTTGGGACCACAGGTGTTGAAACGAGTGAGAAGGATAAGCCTTTCAGAGGACTTAACTTGAAGAAAGGTAGAGATGCTAGGATTGCCTCAAACAGAATTCTGGAGCAAGAGTATGGCTGGATGATCCATGGTGCTGTAACTGGCTCATGTTTGAAAGGTGAAAAGGAAGGTCTCAGACTGGTAGACAAAAATGTAAATGAGACAGAAGGTGAACAGAAGGATTGAATTATTCAAAAGTTGGGATAGAATGGATGAGCCAATTAAATATAAACTCTAAGTAGTTGAAAGCTGTCCAGTGAGCTAAGCGCATCAAGGCGCTGTGAGTGACCATGGGTGGAAACTGGATTTTGTGTGTGTGACCAGTAGAAACCAGCCCATTAAAGTTCATCAAGCTTGGGAATTACAGACTCACTATGGCTACTTTTCTGCCTTGGACATTTCACATGCAGAGTGAGAAGGTTATAACTGAGACTTTCACCAACAACAGGCCGCACCAGACATTTACATGTTGTTGTTCAGTCGTTCATCATCCCAAATTAGCAACTAACATACCTAATTGACAACTTCAGTCCGTCTGTAAGCCCCATTCCATGCCTACCTCTAACTTAATCTCATTATTTCCTTGTGATTAACCCAGATTTGGTGATATAATACTATCAACCAGTCCAGTTTGCTCCAGTTCAGGAGCAGAAAAAAAGAAATCTCTCCAGTGACTCTATATTTTTTCAGAATTTTTTTTTTATGATGAAAATATCTTGCTTCAATCTCATTGCTTCATAGTTATCTCTGATGTACAGGCCAACCCTAAGATTTCTTCACATTTTAGTTACATAGTCTTGATCTTTAAAAATGAACTGACTATATTATGGTACAGAAACAAAATAATGGAGGGAGAACAGAACAAAATAAATGGGAAGGCACAGCCGTCACAAGGACATGATCTATAAGGGGATCAAGACAAAACAAAGCCAAGCAACACGGCTTCTTGTTCTGCTGTAAGAACAAGTGTAAGCAGAGAAGTGCCCATGGTAACAACTTCTTCACAGCCTTGGGCATGAGCTTCACTGGAGATTTGTTTCATGATGTGGGCCTGGAGTAAAATGTTCATTCAAAAACATCTAAGTGCTTACTACGTGCCAGACATTATTTCTAGGCATTAGGGATATAGCAATGAAGAAAACTAAGTATTTCCTGTCCACATGGAGACCACATTTTGTGGCTGTGAGGGACAGCATCCATAACCAAAATAAATAGTATATCAAATGACGATGTGTACTCTGGGAGATAAGGATGTGGTTGTGGTGTGAAATTGGCTGGGGAAGCCTTCTCTGATGCTTGAGCAAAGACCTGGAGAAGGTATGGGAGTGAGTCACCCGGCCGCAGGGAGGAGGAGCATTGCAGGCAGAAGGAACAGTTAGTATAAAATACCCAAGTCAGGAGCATTCCTGAAATGTTGAAGAAACAGAAAGCATGCCTGCAGCTGCAAAGATATGAGAAAAAGAATAG 4 . ID=chr18-22550726-INS-5693;SVTYPE=INS;SVLEN=5693;TIG_REGION=h1tg002233l:51592-57284,h2tg001847l:125277-130965;QUERY_STRAND=-,-;HOM_REF=0,3;HOM_TIG=0,3;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=215.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,7:7:.:27:60:0,0,4,3:7 -chr18 22592086 chr18-22592087-DEL-54;pbsv.DEL.420 ATTCCATTCAACAGTCTATCTCGTACCAGTGGAAGCTGGGGAGACAGGATTAGTT A 4 PASS ID=chr18-22592087-DEL-54;SVTYPE=DEL;SVLEN=-54;TIG_REGION=h1tg002233l:10246-10246;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=216.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:6:23:7 +chr18 22592086 chr18-22592087-DEL-54;pbsv.DEL.420 ATTCCATTCAACAGTCTATCTCGTACCAGTGGAAGCTGGGGAGACAGGATTAGTT A 4 PASS ID=chr18-22592087-DEL-54;SVTYPE=DEL;SVLEN=-54;TIG_REGION=h1tg002233l:10246-10246;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=216.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:6:23:7 chr18 22626727 pbsv.INS.DUP.421 T TGGCTAAGTGAAAAGGTTGGCAAATCCTCTCCCCAAAAGGCAAT 0 PASS SVTYPE=INS;SVLEN=43;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,5:11:2,4,3,2:4 chr18 22636480 pbsv.INS.422 T TCTACTACCTTTATTTCTACT 2 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:2,3,1,2:4 chr18 22638521 pbsv.INS.423 G GGGAAGGAAGGAAGGAAGGAA 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:2,3,1,2:4 @@ -667,18 +667,18 @@ chr18 22701427 pbsv.INS.426 G GATAGTATACCCTTATTAGTAATG 2 PASS IMPRECISE;SVTYPE=I chr18 22740299 chr18-22740300-INS-202;pbsv.INS.427 T TTATAATTCACTATATAGTGAATTATAATTATATATATAATTCACTATATAGTGAATTATAATTATATATATAATTCACTATATAGTGAATTATAATTATATATAATTCACTATATAGTGAATTATAATTATATATATAATTCACTATATAGTGAATTATAATTATATATATAATTCACTATATAGTGAATTATAATTATATA 4 PASS ID=chr18-22740300-INS-202;SVTYPE=INS;SVLEN=202;TIG_REGION=h1tg002866l:37363-37564,h2tg002696l:37363-37564;QUERY_STRAND=+,+;HOM_REF=0,67;HOM_TIG=0,67;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=217.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:7:19:7 chr18 22983661 chr18-22983662-INS-135 G GTAACTATTTAGAAATTTAATTCACTTGCTTTAACCTTGTTCTGATCATTTTTTACTTGGAATCTGAAATTTGGTTTTAAGATGTACGATAACCTTGAGCCATACAAATGATTTTAAAATAATTTTAAATTATTTT 4 . ID=chr18-22983662-INS-135;SVTYPE=INS;SVLEN=135;TIG_REGION=h1tg002866l:280959-281093,h2tg002696l:280959-281093;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=218.0 GT:DR:DV:GQ:SUPP 1/1:.:8:22:3 chr18 22983673 pbsv.INS.DUP.428 T TAACTATTTAGAAATTTAATTCACTTGCTTTAACCTTGTTCTGATCATTTTTTACTTGGAATCTGAAATTTGGTTTTAAGATGTACGATAACCTTGAGCCATACAAATGATTTTAAAATAATTTTA 0 PASS SVTYPE=INS;SVLEN=125;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 -chr18 23022651 chr18-23022652-INS-52 T TAAAATAAAATAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA 4 . ID=chr18-23022652-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h2tg002696l:320104-320155;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=219.0 GT:DR:DV:GQ:SUPP 1/1:.:12:33:3 -chr18 23022663 chr18-23022664-INS-55 T TAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAAAAATAA 4 . ID=chr18-23022664-INS-55;SVTYPE=INS;SVLEN=55;TIG_REGION=h1tg002866l:320122-320176;QUERY_STRAND=+;HOM_REF=0,11;HOM_TIG=0,11;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=219.1 GT:AD:DP:SAC:SUPP 1/1:1,13:14:1,0,7,6:5 +chr18 23022651 chr18-23022652-INS-52 T TAAAATAAAATAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAA 4 . ID=chr18-23022652-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h2tg002696l:320104-320155;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=219.0 GT:DR:DV:GQ:SUPP 0/1:.:12:33:3 +chr18 23022663 chr18-23022664-INS-55 T TAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAAAAATAA 4 . ID=chr18-23022664-INS-55;SVTYPE=INS;SVLEN=55;TIG_REGION=h1tg002866l:320122-320176;QUERY_STRAND=+;HOM_REF=0,11;HOM_TIG=0,11;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=219.1 GT:AD:DP:SAC:SUPP 1/0:1,13:14:1,0,7,6:5 chr18 23038124 pbsv.INS.430 G GCAGTTACTACTGTTACTACTTGAGACCATCACTACAA 2 PASS SVTYPE=INS;SVLEN=37;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 23040068 pbsv.DEL.431 AAAGGGAGGGAGGAAGGAAGGAAGAAAGGGAGGGAGGAAGGAAGGAAGG A 2 PASS SVTYPE=DEL;SVLEN=-48;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,3,3:4 chr18 23090074 pbsv.DEL.432 GGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAGAA G 2 PASS SVTYPE=DEL;SVLEN=-33;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:4,1,2,1:4 -chr18 23218258 chr18-23218259-INS-624;pbsv.INS.433 A ACATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGGTTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGGTTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGGTTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCG 4 PASS ID=chr18-23218259-INS-624;SVTYPE=INS;SVLEN=624;TIG_REGION=h1tg002866l:515790-516413,h2tg002696l:515780-516403;QUERY_STRAND=+,+;HOM_REF=0,65;HOM_TIG=0,65;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=220.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:4:26:7 +chr18 23218258 chr18-23218259-INS-624;pbsv.INS.433 A ACATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGGTTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGGTTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGGTTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCG 4 PASS ID=chr18-23218259-INS-624;SVTYPE=INS;SVLEN=624;TIG_REGION=h1tg002866l:515790-516413,h2tg002696l:515780-516403;QUERY_STRAND=+,+;HOM_REF=0,65;HOM_TIG=0,65;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=220.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:5:4:26:7 chr18 23218259 Sniffles2.INS.9FS11 C CATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGGTTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGGTTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCG 3 GT PRECISE;SVTYPE=INS;SVLEN=337;SUPPORT=2;COVERAGE=8,9,9,9,9;STRAND=+-;AF=0.222;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:0:7:2:2 chr18 23218468 pbsv.DEL.434 CCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGG C 2 PASS SVTYPE=DEL;SVLEN=-72;SVANN=TANDEM;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=220.3 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:6:3:13:6 chr18 23218541 Sniffles2.INS.A1S11 C CTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGGCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGCCTCCCGCATCCTCACTTGCCCTGC 3 GT PRECISE;SVTYPE=INS;SVLEN=289;SUPPORT=2;COVERAGE=9,9,9,9,7;STRAND=+-;AF=0.222;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:0:7:2:2 chr18 23469654 pbsv.INS.435 A ACTCTCTCTCTCTCTCTCTCTC 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=21;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:2,1,3,1:4 chr18 23478606 pbsv.DEL.436 CATATATATATATATATATATATATATATATATATATAT C 2 PASS SVTYPE=DEL;SVLEN=-38;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:2,1,2,0:4 -chr18 23493747 chr18-23493748-INS-92;pbsv.INS.437 C CGGCCTCCTCCTTTTCTTATAAAGCCACCTGGGGTCCCTATCCTGATGACCTCATCTAATCCTAATTACTTCCCAAAGGCCTCCTCCACACCA 4 PASS ID=chr18-23493748-INS-92;SVTYPE=INS;SVLEN=92;TIG_REGION=h1tg003448l:68515-68606,h2tg003287l:68515-68606;QUERY_STRAND=-,-;HOM_REF=0,125;HOM_TIG=0,125;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 0/1:1,1:2:1,0,1,0:5 +chr18 23493747 chr18-23493748-INS-92;pbsv.INS.437 C CGGCCTCCTCCTTTTCTTATAAAGCCACCTGGGGTCCCTATCCTGATGACCTCATCTAATCCTAATTACTTCCCAAAGGCCTCCTCCACACCA 4 PASS ID=chr18-23493748-INS-92;SVTYPE=INS;SVLEN=92;TIG_REGION=h1tg003448l:68515-68606,h2tg003287l:68515-68606;QUERY_STRAND=-,-;HOM_REF=0,125;HOM_TIG=0,125;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/1:1,1:2:1,0,1,0:5 chr18 23577367 chr18-23577368-INS-156;pbsv.INS.438 T TGATTGGTGTGTTTACAAACCTTGAGCTAGACATAAAGGTTCTCCACGTCCTCACCAGAGCAGCTAGATACAGTGTCGATTGGAGCACTCACAAACCTTGAGCTAAACACAGGGTGCTGATTGGTGTGTTTACAAACCTTGAGCTAGATAGACTGCC 4 PASS ID=chr18-23577368-INS-156;SVTYPE=INS;SVLEN=156;TIG_REGION=h1tg000575l:14894-15049,h2tg020622l:19172-19329;QUERY_STRAND=+,-;HOM_REF=0,9;HOM_TIG=0,9;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=222.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 chr18 23616136 pbsv.INS.439 G GCATACTCTACACATACCGTATGTATGTATGCATACTCTACACATACCGTATGTATGTATGCATACTCTACACATACCGTATGTATGTATGCATACTCTACACATACCGTATGTATGTATGCATACTCTACACATACCGTATGTATGTATGCATACTCTACACATACCGTATGTATGTATGCATACTCTACACATACCGTATGTATGTATGCATACTCTACACATACCGTATGTATGTATG 2 PASS SVTYPE=INS;SVLEN=240;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:5,0,0,1:4 chr18 23681380 chr18-23681381-INS-112 G GGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGATGGAAAGAAAGAAAGAAAGATGGAAAGAAAGAAAGAAAGAAA 4 . ID=chr18-23681381-INS-112;SVTYPE=INS;SVLEN=112;TIG_REGION=h1tg000575l:119083-119194,h2tg000554l:84801-84912;QUERY_STRAND=+,+;HOM_REF=0,42;HOM_TIG=0,42;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=224.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,3,2:7 @@ -686,11 +686,11 @@ chr18 24079932 pbsv.DEL.441 GCTGGGACTACAGGTGTGCACTACCACA G 2 PASS SVTYPE=DEL;SVL chr18 24098413 pbsv.INS.442 C CTTCCTTCCTTCCTCCCTCCCTCCCTCT 2 PASS SVTYPE=INS;SVLEN=27;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,4:8:1,3,4,0:4 chr18 24287772 pbsv.INS.443 A AAAAATAAATTAAAATAAAAT 2 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 chr18 24315786 pbsv.DEL.444 AATATAATATATAGTATATATTATATAATAAAAT A 2 PASS SVTYPE=DEL;SVLEN=-33;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,3,6:4 -chr18 24323398 chr18-24323399-DEL-1231;pbsv.DEL.445 CAAAAATTAGCAGAGACGGGGTTTCACCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGAATACAGGCGTGAGCCACCACACCCAGCCAGGGTGAGGCTTTTTCTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTAAAAAAAAAAAAAAAAATTAGCCAGGAGTGGTGGTGAGCACTTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAGAACTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAGCTTCACCCTGCCTTTTGAATCCCAGAGAACCTGTTCTGGGCCAACAATGCACCACCAGGCTTTCCCAAGTGCACCAAACATAGTTTTGAATAGTTTTCCTTGGGCAAAGCTCCTCTTTCCTTTTGAACTTCAGCCAGAGGGCCCTCACAGGCAGAAGACTAAATTTCAGATGCTTCTGTCTTGCCCTCTCCCTCCCTCTCAATAAATTTTCTGAAAAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATATCAAATAGATAAACTACATGCATACACATAAAACAATTCCCTCACCCATAGATAACTCACGTGTATACATTGGTGCGTATTTCCAGACTCCCAATAAAAACATGAATATGAATATAAAAAAAAAAAAAAAAAAAAAAAAAA C 4 PASS ID=chr18-24323399-DEL-1231;SVTYPE=DEL;SVLEN=-1231;TIG_REGION=h1tg025935l:35013-35013,h2tg012813l:145100-145100;QUERY_STRAND=+,-;HOM_REF=0,10;HOM_TIG=0,10;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=225.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:5:13:7 +chr18 24323398 chr18-24323399-DEL-1231;pbsv.DEL.445 CAAAAATTAGCAGAGACGGGGTTTCACCATCTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGAATACAGGCGTGAGCCACCACACCCAGCCAGGGTGAGGCTTTTTCTTTTTTTTTTTTTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAATGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGATATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGGCATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATACTCATTTGGGTAAAAAAAAAAAAAAAAATTAGCCAGGAGTGGTGGTGAGCACTTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAGAACTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAGATCACGCCATTGCACTCCAGCCTGGGTGACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAGCTTCACCCTGCCTTTTGAATCCCAGAGAACCTGTTCTGGGCCAACAATGCACCACCAGGCTTTCCCAAGTGCACCAAACATAGTTTTGAATAGTTTTCCTTGGGCAAAGCTCCTCTTTCCTTTTGAACTTCAGCCAGAGGGCCCTCACAGGCAGAAGACTAAATTTCAGATGCTTCTGTCTTGCCCTCTCCCTCCCTCTCAATAAATTTTCTGAAAAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATATCAAATAGATAAACTACATGCATACACATAAAACAATTCCCTCACCCATAGATAACTCACGTGTATACATTGGTGCGTATTTCCAGACTCCCAATAAAAACATGAATATGAATATAAAAAAAAAAAAAAAAAAAAAAAAAA C 4 PASS ID=chr18-24323399-DEL-1231;SVTYPE=DEL;SVLEN=-1231;TIG_REGION=h1tg025935l:35013-35013,h2tg012813l:145100-145100;QUERY_STRAND=+,-;HOM_REF=0,10;HOM_TIG=0,10;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=225.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 chr18 24337375 pbsv.INS.446 T TTAACATAACATAACATAACA 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,6,2:4 chr18 24410778 pbsv.DEL.447 CATTCTCAGGAATTATTTGTTTATATGTTTAACTCTGACAGGCTATGGGCTTCTTTTTTTTTTTTTTTTTTTTTGAGATGGAGCCTCGCTGTGTTGCCCAGGCTGGAATGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCTGCCTCCAGGGTTCACGCCATTCTCCTGCCTCAGGCTCCAGAGTAGCTGGGACCACAGGCGCCCACCACCACGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTCGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCACCGGCTATGGGCTTCTTAAAGTCAGAAACTATGTCTTCTTTATTTTTATATCTTCAATATATAGCCAAATTATGGCATAGATCAAGTCTTGATAAATATTCTTGAATAACCAACCTAATGAATACATAAGTTGGATAGGCAGAGTATACATGAAAGCAAGATAGTTTGGGGAAGGTCTTTTTTGTTTTTGTTTTTTTTTTTTTTAATTTAGAGTTTGGCCGGGTGTGGTGGCTCACACTTGTAACCCAGCACTTTGGGAAGCTGAGGCAAGCAGATCACTTGAGGTCAGCAGTTTGAGACCAGCCTGGCCAACATGGTAAAAACCCTGTCTCTACTGAAAATACAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAAAGCCAGTTACTTGGGAGGCTGAGGCACAAGAATCACTGGAGCCCAGGAGGCAGAGGTTGTAGTGAGCTGCGATCACTTCATTGCACTTCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAAAAAAAATTAGAGACTGGGTCTCTGTTGCCCAGGCTGGAGTGCAGTGATGTGATCATGGCTTACTGCATCCCAAACTCCTGGGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTGCAGGCAGTTGCCACTACCCCTGGCTAATATTTATTTATTTATTTATTTTTTGTAGAGGTAGAGTCTACATTGCCCAGGCTGGTCTCGCACTCCTGGACTCACACAATCCTCCCACCTCAGCCTCCCAAAGTTCTGGGATTACATGCATGAGCCACCACTCCCCACCTAAGAATGTTTTGAATTTGGCTTTGAAGTGTTCTTTCTTTAAAAAAAATTTGTTTCACACCGCTGGACTAGGATGAAATGGCTGTGAAATGTTGAGTTTAAGATGTGACATCTAAGATACCCACTTGTAAATGTCTTATAGATACAGAAAGAGTAGTG C 2 PASS SVTYPE=DEL;SVLEN=-1305;AC=1;NumCollapsed=1;NumConsolidated=0;CollapseId=226.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:8:2:2:4 chr18 24440143 pbsv.DEL.448 ACTCATGTATATTATTTCAGTCCATG A 2 PASS SVTYPE=DEL;SVLEN=-25;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,5:10:2,3,2,3:4 -chr18 24491359 Sniffles2.INS.A6S11 A ACATATATGTATTTATATACATATAAAAACATATATGTATTTATATATACGTATATTAAATT 3 PASS PRECISE;SVTYPE=INS;SVLEN=62;SUPPORT=3;COVERAGE=6,6,6,6,6;STRAND=-;AF=0.5;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=227.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:0,6:6:0,0,2,4:6 +chr18 24491359 Sniffles2.INS.A6S11 A ACATATATGTATTTATATACATATAAAAACATATATGTATTTATATATACGTATATTAAATT 3 PASS PRECISE;SVTYPE=INS;SVLEN=62;SUPPORT=3;COVERAGE=6,6,6,6,6;STRAND=-;AF=0.5;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=227.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:0,6:6:0,0,2,4:6 chr18 24562426 pbsv.INS.DUP.450 A ATATTAAAAGATGATTTTAAAAT 0 PASS SVTYPE=INS;SVLEN=22;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,3,1:4 chr18 24666283 pbsv.INS.451 A AATTTCTTTCTGCTTGATTCCCTGGTGCCCATCTTCT 2 PASS SVTYPE=INS;SVLEN=36;AC=1 GT:AD:DP:SAC:SUPP 0/1:9,4:13:4,5,1,3:4 chr18 24748682 pbsv.DEL.452 TCCTTCCCTCCTCCCTCCCTTCC T 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,6:9:2,1,2,4:4 @@ -705,17 +705,17 @@ chr18 25393453 pbsv.DEL.458 CATCTCCAGCCGTGGTGCAGGGAGGGGAGAGA C 2 PASS SVTYPE=DEL chr18 25660998 pbsv.DEL.459 TCTGTGTGTGTGTATATATATATATATATATACACA T 2 PASS SVTYPE=DEL;SVLEN=-35;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,6:12:2,4,2,4:4 chr18 25661009 pbsv.INS.460 G GTGTATATATATATATATATATA 2 PASS SVTYPE=INS;SVLEN=22;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,6:12:2,4,2,4:4 chr18 25867696 pbsv.INS.461 A ATAAAAAAAAATTTTTTTTTTAAT 2 PASS SVTYPE=INS;SVLEN=23;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,13:13:0,0,7,6:4 -chr18 25887654 chr18-25887655-INS-323;pbsv.INS.462 T TGGAATGTAAATGGACTAAACTTTCTAAAGACATAAAGTGGCTGAATGGATTTAAGAAAAAAAAAAAAAGACCTAATGCTATCTACAAGAAACACACTTTACCTATAAAGACACATAGACTGAAAATAGGGGAATGGAAAAAGATATTTCATGCATATGGAAACTAAAAAAAAAACTACTGCTATATTTATATAAGACAAAATAGATTTCAAAACAAAAGTATCAAAAGAGACAAAGAAGGTCATTATATAATGATAAAGGAGTCAATCCAGTAAAAGGATGTAACAATTGTAAATATATACGCACCAAACACTGGAGCACCCA 4 PASS ID=chr18-25887655-INS-323;SVTYPE=INS;SVLEN=323;TIG_REGION=h1tg001779l:98672-98994;QUERY_STRAND=-;HOM_REF=0,1;HOM_TIG=0,1;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=230.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:6:33:7 +chr18 25887654 chr18-25887655-INS-323;pbsv.INS.462 T TGGAATGTAAATGGACTAAACTTTCTAAAGACATAAAGTGGCTGAATGGATTTAAGAAAAAAAAAAAAAGACCTAATGCTATCTACAAGAAACACACTTTACCTATAAAGACACATAGACTGAAAATAGGGGAATGGAAAAAGATATTTCATGCATATGGAAACTAAAAAAAAAACTACTGCTATATTTATATAAGACAAAATAGATTTCAAAACAAAAGTATCAAAAGAGACAAAGAAGGTCATTATATAATGATAAAGGAGTCAATCCAGTAAAAGGATGTAACAATTGTAAATATATACGCACCAAACACTGGAGCACCCA 4 PASS ID=chr18-25887655-INS-323;SVTYPE=INS;SVLEN=323;TIG_REGION=h1tg001779l:98672-98994;QUERY_STRAND=-;HOM_REF=0,1;HOM_TIG=0,1;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=230.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:5:6:33:7 chr18 25893617 chr18-25893618-DEL-69;pbsv.DEL.463 CAGAAGTAATGAGTAATGAGTATGGGAATTCCTCCTACTTATAACTAACTTCTTTTCCTTTCTTGGGGTT C 4 PASS ID=chr18-25893618-DEL-69;SVTYPE=DEL;SVLEN=-69;TIG_REGION=h1tg001779l:92709-92709,h2tg001653l:92709-92709;QUERY_STRAND=-,-;HOM_REF=0,0;HOM_TIG=0,0;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=231.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:6:6:7 chr18 25946774 pbsv.DEL.464 AGGAGGAAGGAAGGAAGGAGGAAAGAAGGAAGGAG A 2 PASS SVTYPE=DEL;SVLEN=-34;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,7:13:3,3,3,4:4 chr18 25946780 pbsv.INS.465 A AAGGAAGGAAGGAGGAAAGAAGGAAGGAAGGAGGAAGGAAGGAAGG 2 PASS SVTYPE=INS;SVLEN=45;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,5:13:3,5,3,2:4 chr18 25989812 pbsv.INS.466 T TAAGGAAGGAAGAAAGAAAGA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,1:2:0,1,1,0:4 chr18 26009099 pbsv.DEL.467 TTATATATATATATATATATA T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,6,6:4 -chr18 26214256 chr18-26214257-INS-160 T TACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGGGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGAAGAAAGAG 4 . ID=chr18-26214257-INS-160;SVTYPE=INS;SVLEN=160;TIG_REGION=h1tg001098l:216896-217055;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=232.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,6:6:.:6:16:0,0,3,3:7 +chr18 26214256 chr18-26214257-INS-160 T TACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGGGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGAAGAAAGAG 4 . ID=chr18-26214257-INS-160;SVTYPE=INS;SVLEN=160;TIG_REGION=h1tg001098l:216896-217055;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=232.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,6:6:.:6:16:0,0,3,3:7 chr18 26247842 chr18-26247843-DEL-649;pbsv.DEL.469 CTCCAGCCTGGGCAACAGAACAAGACTCTGTCTCAAAAAAAAGTAAAAAAAATTGAGACAGGGTCTTGCTGTCACCCAGGCTGGAATGCATTAGTACAATCAGGGCTCACTTCAGACTGACCTCCCTAGCATAAGCAGTTCTCCTACGTCAAACCTACTGAGTGACTGGGACTACAGGTGTGCCTCACTATGCCCAGCTAATTTTTTTTTTTTTTTGGTACATTTGGGATCTCACTGTTTCCCAGGCTGGCCTTGAACTCCTGGGCTCAAGTGATCTTCCTGCCTTAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCGACTGCACCTGGCCCCTAATCTCCTTTTTAAATGTCATCTTTATTGAGGTAAAATTTTTGTTATTAAAAAAGGGGAACCTAGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTAAGGCAGGAAGATCACTTGAGCCCAGGAGTTCAAGGCCAGCCTGGGAAACAGTGAGATCCCAAATGTACCAAAAAAAAAAAAAAATTAGCTGGGCATAGTGAGGCACACCTGTAGTCCCAGTCACTCAGTAGGTTTGACGTAGGAGAACTGCTTATGCTAGGGAGGTCAGTCTGAAGTGAGCCCTGATTGTACTAATGCAT C 4 PASS ID=chr18-26247843-DEL-649;SVTYPE=DEL;SVLEN=-649;TIG_REGION=h1tg001098l:250652-250652,h2tg016702l:18739-18739;QUERY_STRAND=+,+;HOM_REF=0,448;HOM_TIG=0,154;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=233.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:5:3:7 chr18 26285222 pbsv.INS.470 G GTTTTTTTTTTTTTTTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=27;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 chr18 26393433 pbsv.DEL.471 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT T 2 PASS SVTYPE=DEL;SVLEN=-33;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,5:11:5,1,4,1:4 -chr18 26466001 chr18-26466002-DEL-79;pbsv.DEL.472 AGTGAAGAAACTCTGGCGAGTGGGGGCCTATCCAGGTCGCCACTCTGCCTTCTCCGAGAAAGACCTACCCGCAGGTACGG A 4 PASS ID=chr18-26466002-DEL-79;SVTYPE=DEL;SVLEN=-79;TIG_REGION=h1tg011193l:118035-118035,h2tg010829l:118035-118035;QUERY_STRAND=-,-;HOM_REF=0,47;HOM_TIG=0,47;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=234.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:5:26:7 +chr18 26466001 chr18-26466002-DEL-79;pbsv.DEL.472 AGTGAAGAAACTCTGGCGAGTGGGGGCCTATCCAGGTCGCCACTCTGCCTTCTCCGAGAAAGACCTACCCGCAGGTACGG A 4 PASS ID=chr18-26466002-DEL-79;SVTYPE=DEL;SVLEN=-79;TIG_REGION=h1tg011193l:118035-118035,h2tg010829l:118035-118035;QUERY_STRAND=-,-;HOM_REF=0,47;HOM_TIG=0,47;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=234.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:4:5:26:7 chr18 26677718 pbsv.INS.473 G GAGGAAGAAGAAGAAGAAGAAAGAGAAGAAGAAGAAGAAGAAA 2 PASS SVTYPE=INS;SVLEN=42;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,5:10:2,3,2,3:4 chr18 26991656 chr18-26991657-DEL-721;pbsv.DEL.474 ACTAAGAAGCACCTGCCAGTGAAAGCAGGAGACGATGGTGACTTAGATGCCAAGCAAAGACAGTTTTCTGAGGAGGAGGGAGTGATCAACTGTGTCAAATGTTTCTGACAGGTCTGATGAAGACGAGGACTAAGACCTGACCACTGGATCTAGTAATAGGGTGTTCATTGATGGCCCAGAGCAGTTTTGTAAAGTGATGGAAGTGAAAGTCCCTGTGGAAGGGCTTTGAGAAGGAATGGACAAGAAGAACTCCTTTGAAGAGCATTGCTGCAAGAGGCAGAGCAGTGGGCAGTTGTTGTGAGGGAAAGTAGGGTTAGAAGAGAATATTGAGGATGGGAGGAAGAACGGCATGTTTGTGTGGTGAAGGAATGATCCAGCGAAAAAAGGAAAAATTGATGTTGTTATCTGTCACTTATGTTCTTGTTCATATCCCACCCTGTTCCTATGTTTGGGGATCCCAACTTTGAGGTTGAGCCCACACATCCTAGATTCTCACTTTCCCAGAATCCACAAAGATGGGGCACAGGAACAAGAAGCTCTACTACCAGATGCCTCAGCCCCTCACTCTGAATTAGAAGCGAGTGACATGAAGAACAAATCACACCACATCTATGCTGGAAACAGATGCTAGTGAGCCTTCAGACACAGAAAGTTTGAGAAAAAGAAAAGTGTTATGTTTTCCTTTAAAGGAGTTTATAATCACTGAGGGTGGGGATTGACTG A 4 PASS ID=chr18-26991657-DEL-721;SVTYPE=DEL;SVLEN=-721;TIG_REGION=h2tg016815l:8565-8565;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=235.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:7:3:10:7 chr18 27053256 pbsv.INS.475 A AAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGG 2 PASS SVTYPE=INS;SVLEN=33;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,8:14:3,3,4,4:4 @@ -723,7 +723,7 @@ chr18 27365114 pbsv.DEL.476 GATCACTAAATATGAGGCAAGGCTTTTTTATTTTTATTAACTGAGTTTCTAA chr18 27369184 pbsv.DEL.477 TACACACACACACACACACAC T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,1,1:4 chr18 27476892 pbsv.DEL.478 TAAATAAATAAATAAATTTAA T 2 PASS SVTYPE=DEL;SVLEN=-20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,7,5:4 chr18 27547583 pbsv.INS.479 A ACCAAGGTATCTTTTAGAGCTAAAGGAAAAG 2 PASS SVTYPE=INS;SVLEN=30;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:1,0,0,4:4 -chr18 27650237 chr18-27650238-INS-67 T TATATATACACATATATATATATATACGTATATATATATACATATATATATATATATTATATATATAA 4 . ID=chr18-27650238-INS-67;SVTYPE=INS;SVLEN=67;TIG_REGION=h1tg005798l:102393-102459;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=237.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:6,4:10:6:4:23:3,3,3,1:7 +chr18 27650237 chr18-27650238-INS-67 T TATATATACACATATATATATATATACGTATATATATATACATATATATATATATATTATATATATAA 4 . ID=chr18-27650238-INS-67;SVTYPE=INS;SVLEN=67;TIG_REGION=h1tg005798l:102393-102459;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=237.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:6,4:10:6:4:23:3,3,3,1:7 chr18 27855645 pbsv.INS.481 T TATATTTATATATTATATATTTATATATTTATATATTATATATAATATATAAATATATATATTTATACATTATATATTATATATATAATTATATATAATATATATTATATTTTATATATAATATATATTATATAAATATATAATATATAATATATATTATATATTATATATAATATATAATATATATTATATATTATATATAATATATAATATATATAAAATATAATATATATTATATATAATTATATATATAATATATAATGTATAAATATATATATTTATATATATTTATATATATATAAATATATATAATATAATATATATTATATTATATATAATATATAATATATATTATATATTATATATAATATAATATATATTATATAATATATAATATATAATATATATTATATTATATATAATATATAATATATTATATATATTTATATATAATATATAATATATATTATATAAATATATATAATATATATTATATAAATATATATTATATATATTTATATATAAATATATATTTACATAAATATATAAATATTATATTTATATATATTTATATATTATATATAAATATTATATTTATATATATTTATATATTATATATAAATATTATATTTATATATATTTATATATTATATATAAATATTATATTTATATATATTTATATATTATATATAAATATTATATTTATATATATTTATATATTATATATAAATATTATATTTATATATTTCTGTATTATATATAAATATC 2 PASS SVTYPE=INS;SVLEN=767;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,3:4:1,0,2,1:4 chr18 27855653 chr18-27855654-INS-661 T TATATTATATATTTATATATTTATATATTATATATAATATATAAATATATATATTTATACATTATATATTATATATATAATTATATATAATATATATTATATTTTATATATAATATATATTATATAAATATATAATATATAATATATATTATATATTATATATAATATATAATATATATTATATATTATATATAATATATAATATATATAAAAATATAATATATATTATATATAATTATATATATAAATATATAATGTATAAATATATATATTTATATATATTTATATATATATAAATATATATAATATAATATATATTATATTATATATAATATATAATATATATTATATTATATATAATATAATATATATTATATAATATATAATATATAATATATATTATATATATATAATATATAATATATTATATATATTTATATATAATATATAATATATATTATATAAATATATATAATATATATTATATAAATATATATTATATATATTTATATATAAATATATATTTACATAAATATATAAATATTATATTTATATATATTTATATATTATATATAAATATTATATTTATATATATTATATATTATATAAATATTATATTATATATATTTATATATTTATATATAATATTATATTTATATATA 4 . ID=chr18-27855654-INS-661;SVTYPE=INS;SVLEN=661;TIG_REGION=h1tg024013l:5152-5812,h2tg022608l:5152-5812;QUERY_STRAND=-,-;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=238.0 GT:DR:DV:GQ:SUPP 1/1:.:3:8:3 chr18 27856295 chr18-27856296-INS-120 A ATATATGATATAAAATATATTTATATATATTTGTATATGATATAAAATATATTTATATATATTTGTATATGATATATTATATATATTTGTATATGATATAAAATATATTTATATATATTTG 4 . ID=chr18-27856296-INS-120;SVTYPE=INS;SVLEN=120;TIG_REGION=h1tg024013l:4374-4493,h2tg022608l:4374-4493;QUERY_STRAND=-,-;HOM_REF=0,31;HOM_TIG=0,75;AC=2 GT:SUPP 1/1:1 @@ -740,24 +740,24 @@ chr18 28693035 pbsv.DEL.490 GAGTCCGTGTGAAGAGACCACCAAACAGGCTTTGTGTGAGCAACATGGCTGT chr18 28694563 chr18-28694564-DEL-93;pbsv.DEL.491 ACTTGATGTGTAGGGAAGGGAGGGGGCCTGAATAATCCTTGAGGAGTAGTAGAATAGCAAATTTGCTAGTCCTGGGCAGGGGCAAATCCCCGGG A 4 PASS ID=chr18-28694564-DEL-93;SVTYPE=DEL;SVLEN=-93;TIG_REGION=h2tg009867l:3658-3658;QUERY_STRAND=-;HOM_REF=0,58;HOM_TIG=0,58;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=243.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:2:8:7 chr18 28755482 pbsv.DEL.492 ATATAGTTGAAATATACATGGTTGCTGTAATG A 2 PASS SVTYPE=DEL;SVLEN=-31;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,8,4:4 chr18 28783779 chr18-28783780-DEL-321;pbsv.DEL.493 CAAAAGAAAAGGCATTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAAGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAGAAAAAAAAAA C 4 PASS ID=chr18-28783780-DEL-321;SVTYPE=DEL;SVLEN=-321;TIG_REGION=h1tg005703l:195133-195133,h2tg005333l:195091-195091;QUERY_STRAND=-,-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=244.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 -chr18 28799448 chr18-28799449-INS-58 A ATATATATATATGTGTATATATATATATATGTGTATATATATATGTGTATATATATATG 4 . ID=chr18-28799449-INS-58;SVTYPE=INS;SVLEN=58;TIG_REGION=h1tg005703l:179702-179759;QUERY_STRAND=-;HOM_REF=0,13;HOM_TIG=0,25;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=245.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,5:6:.:5:13:1,0,3,2:7 +chr18 28799448 chr18-28799449-INS-58 A ATATATATATATGTGTATATATATATATATGTGTATATATATATGTGTATATATATATG 4 . ID=chr18-28799449-INS-58;SVTYPE=INS;SVLEN=58;TIG_REGION=h1tg005703l:179702-179759;QUERY_STRAND=-;HOM_REF=0,13;HOM_TIG=0,25;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=245.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:1,5:6:.:5:13:1,0,3,2:7 chr18 28799493 chr18-28799494-INS-60 T TTGTGTATATATATATGTATATATATATGTGTGTATATTATATGATATATATATGTGTGTG 4 . ID=chr18-28799494-INS-60;SVTYPE=INS;SVLEN=60;TIG_REGION=h2tg005333l:179639-179698;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,1;AC=1 GT:SUPP 0/1:1 chr18 28837163 chr18-28837164-INS-65;pbsv.INS.495 A AGGGGAGGGGAGGGGGAGGGGAGGGGGAGGGGAGGGAAGGGGAGGGGGAGGGGAGGGGGAGGGGAG 4 PASS ID=chr18-28837164-INS-65;SVTYPE=INS;SVLEN=65;TIG_REGION=h1tg005703l:141896-141960,h2tg005333l:141891-141955;QUERY_STRAND=-,-;HOM_REF=0,20;HOM_TIG=0,20;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=246.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 -chr18 28883955 chr18-28883956-INS-82 T TATATCATATAATATCATATATATGATATATATCATATATATCATATATATGATAATATATGATATATATATCATATAATATC 4 . ID=chr18-28883956-INS-82;SVTYPE=INS;SVLEN=82;TIG_REGION=h2tg005333l:95009-95090;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=247.0 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,3,1:5 -chr18 28883961 chr18-28883962-INS-85 T TCATATAATATCATATATATGATATATATCATATATATCATATATATGATATTATATGATATATATATCATATAATATCATATATA 4 . ID=chr18-28883962-INS-85;SVTYPE=INS;SVLEN=85;TIG_REGION=h1tg005703l:95004-95088;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=247.1 GT:DR:DV:GQ:SUPP 1/1:.:4:11:3 +chr18 28883955 chr18-28883956-INS-82 T TATATCATATAATATCATATATATGATATATATCATATATATCATATATATGATAATATATGATATATATATCATATAATATC 4 . ID=chr18-28883956-INS-82;SVTYPE=INS;SVLEN=82;TIG_REGION=h2tg005333l:95009-95090;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=247.0 GT:AD:DP:SAC:SUPP 0/1:0,4:4:0,0,3,1:5 +chr18 28883961 chr18-28883962-INS-85 T TCATATAATATCATATATATGATATATATCATATATATCATATATATGATATTATATGATATATATATCATATAATATCATATATA 4 . ID=chr18-28883962-INS-85;SVTYPE=INS;SVLEN=85;TIG_REGION=h1tg005703l:95004-95088;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=247.1 GT:DR:DV:GQ:SUPP 1/0:.:4:11:3 chr18 29394582 pbsv.DEL.497 GAAAAAGAAAGAAAGAAAGAAAGAA G 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,3,7:4 chr18 29505721 pbsv.INS.DUP.498 T TTTTTTTTTTTTTTTTTTT 0 PASS SVTYPE=INS;SVLEN=18;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,5:6:0,1,2,3:4 chr18 29511688 pbsv.INS.499 T TTTTATATATAATTTATATTTATATAA 2 PASS SVTYPE=INS;SVLEN=26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,1,3:4 -chr18 29595948 chr18-29595949-INS-219 G GATATATTATATATATAATATATCATATATTATATATATAATATATCATATATTATATATATAATATATTATATATAATATATAATATATTATATAAAATATATATAATATATATTATATAATATATAATATATTATATATATAATATATTATATATATACTATATGATATATTCATATATATACATATCATATATTATATATATAATATATAATATATA 4 . ID=chr18-29595949-INS-219;SVTYPE=INS;SVLEN=219;TIG_REGION=h1tg021019l:7042-7260;QUERY_STRAND=-;HOM_REF=0,22;HOM_TIG=0,22;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=248.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,6:6:3:3:21:0,0,2,4:7 +chr18 29595948 chr18-29595949-INS-219 G GATATATTATATATATAATATATCATATATTATATATATAATATATCATATATTATATATATAATATATTATATATAATATATAATATATTATATAAAATATATATAATATATATTATATAATATATAATATATTATATATATAATATATTATATATATACTATATGATATATTCATATATATACATATCATATATTATATATATAATATATAATATATA 4 . ID=chr18-29595949-INS-219;SVTYPE=INS;SVLEN=219;TIG_REGION=h1tg021019l:7042-7260;QUERY_STRAND=-;HOM_REF=0,22;HOM_TIG=0,22;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=248.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,6:6:3:3:21:0,0,2,4:7 chr18 29596323 pbsv.INS.501 A AATATATATCATATATAATATAATATATAATA 2 PASS SVTYPE=INS;SVLEN=31;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,2,4:4 -chr18 29596663 Sniffles2.INS.B4S11 T TTATAATATATATAATATATTATATATTATAATATATATAATATATAATAT 3 PASS PRECISE;SVTYPE=INS;SVLEN=52;SUPPORT=3;COVERAGE=6,6,6,6,5;STRAND=+-;AF=0.5;STDEV_LEN=0.577;STDEV_POS=10.392;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=249.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:0,6:6:0,0,2,4:6 +chr18 29596663 Sniffles2.INS.B4S11 T TTATAATATATATAATATATTATATATTATAATATATATAATATATAATAT 3 PASS PRECISE;SVTYPE=INS;SVLEN=52;SUPPORT=3;COVERAGE=6,6,6,6,5;STRAND=+-;AF=0.5;STDEV_LEN=0.577;STDEV_POS=10.392;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=249.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:0,6:6:0,0,2,4:6 chr18 29624741 pbsv.DEL.503 GCTCTGATATTATTCTCTAATTTATTGGGGTATTAG G 2 PASS SVTYPE=DEL;SVLEN=-35;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,2:3:0,1,0,2:4 chr18 29640584 pbsv.DEL.504 TTTTATTTATTTATTTATTTATTTA T 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,5:11:2,4,2,3:4 chr18 29783794 chr18-29783795-INS-52;pbsv.INS.505 C CATATATATGTGTGTATATATATACACACACATTTAAATGTGTGTGTATATAT 4 PASS ID=chr18-29783795-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h1tg003445l:575122-575173,h2tg007026l:9500-9551;QUERY_STRAND=-,+;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=250.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:4:11:7 chr18 29783999 chr18-29784000-DEL-122 ATGTATATGTGTATATATACACACATGTATATGTGTATATGTGTGTATATATACACACATGTGTATATGTGTGTATATATACACACATGTGTATGTGTGTGTATATATACACACATGTATATG A 4 . ID=chr18-29784000-DEL-122;SVTYPE=DEL;SVLEN=-122;TIG_REGION=h1tg003445l:574919-574919,h2tg007026l:9755-9755;QUERY_STRAND=-,+;HOM_REF=0,11;HOM_TIG=0,11;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=250.1 GT:DR:DV:GQ:SUPP 1/1:.:4:11:3 chr18 29784098 pbsv.DEL.506 TGTATATATACACACATGTATATGTGTATATGTGTGTATATATACACACATGTATATGTGTATATGTGTGTATATATACACACATGTATATGTGTATATGTGTGTATATATACACACATGTATATGTGTGTATATATGTGTATGTATATGTGTATATATACACACATGTATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATGCACACATGTATATGTGTATATATGTGTATATATGCACACAT T 2 PASS SVTYPE=DEL;SVLEN=-462;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,3,1:4 chr18 29784421 chr18-29784422-DEL-340 ACATGTATATGTGTATATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATACACACATGTATATGTGTATATATGTGTATATATGCACACATGTATATGTGTATATATGTGTATATATGCACACATGTATATGTGTATATATGTGTATATATGCACACATGTATATGTGTATATATGTGTATATATGCACACATGTATATGTGTATATATGTGTATATATGCACACATGTATATGTGTATATATGTGTATATATGCACACATGTATATGTGTATATATGTGTATATATGCACACATGTATATGTGTATATATGTGTATATATACACG A 4 . ID=chr18-29784422-DEL-340;SVTYPE=DEL;SVLEN=-340;TIG_REGION=h1tg003445l:574619-574619,h2tg007026l:10017-10017;QUERY_STRAND=-,+;HOM_REF=0,13;HOM_TIG=0,11;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=250.2 GT:DR:DV:GQ:SUPP 1/1:.:4:11:3 -chr18 29924898 chr18-29924899-INS-90;pbsv.INS.507 A AAGGGTCCAATTTCATTCTTCTGCATATGGATATGTGCCAACAATTGGATATCCATATGCAGAAGAATGAAATTGGACCCTTTTACGGAAG 4 PASS ID=chr18-29924899-INS-90;SVTYPE=INS;SVLEN=90;TIG_REGION=h1tg003445l:434404-434493;QUERY_STRAND=-;HOM_REF=0,8;HOM_TIG=0,8;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=251.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 +chr18 29924898 chr18-29924899-INS-90;pbsv.INS.507 A AAGGGTCCAATTTCATTCTTCTGCATATGGATATGTGCCAACAATTGGATATCCATATGCAGAAGAATGAAATTGGACCCTTTTACGGAAG 4 PASS ID=chr18-29924899-INS-90;SVTYPE=INS;SVLEN=90;TIG_REGION=h1tg003445l:434404-434493;QUERY_STRAND=-;HOM_REF=0,8;HOM_TIG=0,8;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=251.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:8:22:7 chr18 29997109 pbsv.INS.508 A ATGCTGACAGTGATATAAACAATGAAGTCCAGGC 2 PASS SVTYPE=INS;SVLEN=33;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,3,3:4 chr18 30026013 pbsv.DEL.509 CTTCCTTCAGGAGCTCTTTTAGGGCAGGCCT C 2 PASS SVTYPE=DEL;SVLEN=-30;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,7,3:4 chr18 30082917 pbsv.DEL.510 ATATATATATATATTTTTTTTTTTTTTTT A 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,2,9:4 @@ -768,7 +768,7 @@ chr18 30292604 chr18-30292605-DEL-329;pbsv.DEL.514 TAGAAATATATTTATCTGGCCGGGCGCGG chr18 30342906 chr18-30342907-DEL-57 GGTGGTAATGAGTCATGCAGCCATTAGGTAGAATTTGTGTCCAACATTGGGCCCACGC G 4 . ID=chr18-30342907-DEL-57;SVTYPE=DEL;SVLEN=-57;TIG_REGION=h2tg003285l:493-493;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 0/1:1 chr18 30354738 pbsv.INS.515 G GGGGGGGGGGGGGGGGGGGGGGGGGGA 2 PASS SVTYPE=INS;SVLEN=26;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:3,2,1,0:4 chr18 30490659 pbsv.INS.516 A AATATAATATATTATATATTATAG 2 PASS SVTYPE=INS;SVLEN=23;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:0,2,1,1:4 -chr18 30491162 chr18-30491163-INS-401 T TTATATATTATATATTATATATAACATATATATTACATATAACATATATAATATAACATATAATATAATATATATTATATATTATTTATAATATATATTATATATAATATTATATATAATATATTATATATATTATATAATATATATTATATTATATATTATATTATATATAATATATAATATATTATATATTATATTTATATATAATATATAATATATTATATATTATATTTTATATAATATATAATATATATTATATATTATATAAAATATAATATATAATATATTATATATTATATATAATATAATATATAATATATATTATATTATATATAACATATATATTAAATATATTATATTATATAACATATATATTATATATTATATATAACATATATATTA 4 . ID=chr18-30491163-INS-401;SVTYPE=INS;SVLEN=401;TIG_REGION=h1tg009701l:76770-77170,h2tg009385l:76770-77170;QUERY_STRAND=+,+;HOM_REF=0,34;HOM_TIG=0,34;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=255.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,2:4:1:2:4:0,2,1,1:7 +chr18 30491162 chr18-30491163-INS-401 T TTATATATTATATATTATATATAACATATATATTACATATAACATATATAATATAACATATAATATAATATATATTATATATTATTTATAATATATATTATATATAATATTATATATAATATATTATATATATTATATAATATATATTATATTATATATTATATTATATATAATATATAATATATTATATATTATATTTATATATAATATATAATATATTATATATTATATTTTATATAATATATAATATATATTATATATTATATAAAATATAATATATAATATATTATATATTATATATAATATAATATATAATATATATTATATTATATATAACATATATATTAAATATATTATATTATATAACATATATATTATATATTATATATAACATATATATTA 4 . ID=chr18-30491163-INS-401;SVTYPE=INS;SVLEN=401;TIG_REGION=h1tg009701l:76770-77170,h2tg009385l:76770-77170;QUERY_STRAND=+,+;HOM_REF=0,34;HOM_TIG=0,34;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=255.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:2,2:4:1:2:4:0,2,1,1:7 chr18 30491463 pbsv.INS.518 A ATTATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATATATTATATATTATATCTATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATATTATAATATAATATATAATATATTATAGATATAATATATTATATATTATAGATATAATATAATATATTATATATTATAGATATAATATAATATATTATATATTATAGATATAATATAATATATTATTATTGATGTAATAATTATTATTATAGATATAATATATATATTATGTATTATAGATATAATATAATTTATATTATAGATATAATATATTATAGATATAATTTATATTATAGATATAATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATTATAGATATAATATAATATATTATATTATAGATATAATATATTATATATTATAGATATAATATAATATATTATATATCATAGATATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATAATATATAATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATAGATATAATATATTATATATTATATTATATCTATAATATATAATATATTATAGATATAATATATTATATATTATAGATATAATATAATATATTATATATTATAGATATAATATAATATATTATTATTATAGATGTAATATAATATATTATATATTATAGATATAATATAATATATTATGTATTATAGATATAATATAATTTATATTATAGATATAATATAAATTATATTATAGATATAATTTATATTATAGATATAATATATTATAGATATAATATAATATATTATATATTATAGATATAATATATTATAGATATAATATAATATATTATATATTATAGATATAATATATAATATAATAATATATATTATACATATATAATATAATAATATTATGTAGCATATTATATATAATAATATAATATATTATATATTATATAACATATATAATATATTATATATTATATATAACATATATATTACATATAACATATATAATATAACATG 2 PASS SVTYPE=INS;SVLEN=1263;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:1,2,0,1:4 chr18 30538915 pbsv.DEL.519 CATATATATATATATATATATATAT C 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 30556593 pbsv.DEL.520 AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAG A 2 PASS SVTYPE=DEL;SVLEN=-45;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:2,0,1,1:4 @@ -778,8 +778,8 @@ chr18 30758547 pbsv.DEL.523 TATATAATATATATAATATATAATATATAGTATATATAATATATAATATATA chr18 30758592 Sniffles2.DEL.2E4S11 ATATATATAATATATAATATATAATATATATAATATATAATATATAGTATATATAATATATAATATATAATATATAATATATATAATGTATATAA A 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-94;SUPPORT=4;COVERAGE=4,4,4,4,4;STRAND=+-;AF=1;STDEV_LEN=11.314;STDEV_POS=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:11:0:4:2 chr18 30803775 pbsv.DEL.524 AAGATATATATATATATATATATATATATATA A 2 PASS SVTYPE=DEL;SVLEN=-31;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,4,1:4 chr18 31116890 pbsv.INS.525 A AAAAGAAAGAAAGAAAGAAAGAAAG 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,4,5:4 -chr18 31150373 chr18-31150374-INS-279;pbsv.INS.526 C CATCAGCAGCAGCACCATCATCATCACCACACTACCATCACCACCATCACCACCATTATCATCACTGCTACCACTATTACCATCACCACTACCATCACCACCACCACCACCATCATCATCATCACCAGCATCATCATCAGCACCATCATCATCACCACACTATCATCACCACGATCACCACCATTATCATCACCACTACCGCTATTACCATCACCACTAACACCATCACCACCACCATCATCACCACCATCACCAGCAGCACTATCATCATCACCACACT 4 PASS ID=chr18-31150374-INS-279;SVTYPE=INS;SVLEN=279;TIG_REGION=h1tg002157l:118543-118821;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,6,5:5 -chr18 31150396 chr18-31150397-INS-312 T TCTTCACCACACTATCATCACCACCATCACCACCATTATCATCACCACTACCACTATTACCATCACCACTACCACCATCACCACCACCACCATCATCACCACCACCATCATCAGCAGCACTATCATCATCACCACACTATCATCACCACCATCACCACCATTATCATCACCATCACCACCACCACCATCATCACCACTACCACTATTACCATCACCACTACTACCACCACCACCACCATCATCACCACCACCATCAGCAGCACCATCATCATCACCACACTATCATCACCACCTTCACCACCGTTGTCATCAC 4 . ID=chr18-31150397-INS-312;SVTYPE=INS;SVLEN=312;TIG_REGION=h2tg007390l:78367-78678;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,1;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=258.1 GT:DR:DV:GQ:SUPP 1/1:.:11:30:3 +chr18 31150373 chr18-31150374-INS-279;pbsv.INS.526 C CATCAGCAGCAGCACCATCATCATCACCACACTACCATCACCACCATCACCACCATTATCATCACTGCTACCACTATTACCATCACCACTACCATCACCACCACCACCACCATCATCATCATCACCAGCATCATCATCAGCACCATCATCATCACCACACTATCATCACCACGATCACCACCATTATCATCACCACTACCGCTATTACCATCACCACTAACACCATCACCACCACCATCATCACCACCATCACCAGCAGCACTATCATCATCACCACACT 4 PASS ID=chr18-31150374-INS-279;SVTYPE=INS;SVLEN=279;TIG_REGION=h1tg002157l:118543-118821;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/0:0,11:11:0,0,6,5:5 +chr18 31150396 chr18-31150397-INS-312 T TCTTCACCACACTATCATCACCACCATCACCACCATTATCATCACCACTACCACTATTACCATCACCACTACCACCATCACCACCACCACCATCATCACCACCACCATCATCAGCAGCACTATCATCATCACCACACTATCATCACCACCATCACCACCATTATCATCACCATCACCACCACCACCATCATCACCACTACCACTATTACCATCACCACTACTACCACCACCACCACCATCATCACCACCACCATCAGCAGCACCATCATCATCACCACACTATCATCACCACCTTCACCACCGTTGTCATCAC 4 . ID=chr18-31150397-INS-312;SVTYPE=INS;SVLEN=312;TIG_REGION=h2tg007390l:78367-78678;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,1;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=258.1 GT:DR:DV:GQ:SUPP 0/1:.:11:30:3 chr18 31152938 chr18-31152939-INS-848 T TTGCAAGTGGTGTTTCTTTTTTTATTTTTTTTTATTTTTTTATTTTTTTATTTTTTTTTTAATTTTTTTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCCTTAGGTATATCTCCCAATGCTATCCCTCCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGATCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATTGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAATGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCTCTGAGCTACGGGAGGACATTCAAA 4 . ID=chr18-31152939-INS-848;SVTYPE=INS;SVLEN=848;TIG_REGION=h2tg007390l:74974-75821;QUERY_STRAND=-;HOM_REF=0,17;HOM_TIG=0,17;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=259.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:5,3:8:5:3:16:3,2,1,2:7 chr18 31168372 pbsv.DEL.528 ACAGGTGTGAGCCACAGCACCTGGCCTCTATGCACTTTTAATAC A 2 PASS SVTYPE=DEL;SVLEN=-43;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:1,2,1,4:4 chr18 31222161 pbsv.INS.529 C CAAAAAAAAAAAAAAAAAAAAAAAA 2 PASS SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:2,0,1,1:4 @@ -790,9 +790,9 @@ chr18 31710814 pbsv.INS.532 C CCACACACACACACACACACACA 2 PASS SVTYPE=INS;SVLEN=22 chr18 31820964 pbsv.INS.533 C CTTTTAATTTTTTTTTTTATA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:4,4,0,1:4 chr18 31935522 pbsv.INS.534 T TCGCAATAAATTGGGAAAAAAACGGGAAAAAAAAATTGG 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=38;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:4,3,1,0:4 chr18 31935548 pbsv.INS.535 T TGAAAAAAAAAAAAAAAAAAAA 2 PASS SVTYPE=INS;SVLEN=21;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,7:8:1,0,4,3:4 -chr18 31940584 chr18-31940585-INS-327 T TGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCTTCTCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAAACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGAACTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGAGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCCGAAAATTTTTTAATTATACCTGTGACTCACATTATATTTCAATTAGACAGCACTGCTCTATGGTGTAAATACATAATTCTAAATACTGTCAGGAGATAAGATGATTAAGAACACA 4 . ID=chr18-31940585-INS-327;SVTYPE=INS;SVLEN=327;TIG_REGION=h1tg021192l:15780-16106;QUERY_STRAND=+;HOM_REF=0,327;HOM_TIG=0,327;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=261.0 GT:DR:DV:GQ:SUPP 0/1:5:5:36:3 +chr18 31940584 chr18-31940585-INS-327 T TGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCTTCTCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAAACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGAACTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGAGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCCGAAAATTTTTTAATTATACCTGTGACTCACATTATATTTCAATTAGACAGCACTGCTCTATGGTGTAAATACATAATTCTAAATACTGTCAGGAGATAAGATGATTAAGAACACA 4 . ID=chr18-31940585-INS-327;SVTYPE=INS;SVLEN=327;TIG_REGION=h1tg021192l:15780-16106;QUERY_STRAND=+;HOM_REF=0,327;HOM_TIG=0,327;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=261.0 GT:DR:DV:GQ:SUPP 1/0:5:5:36:3 chr18 31940896 pbsv.INS.536 G GGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCTTCTCGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAAACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGAACTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGAGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCCGAAAATTTTTTAATTATACCTGTGACTCACATTATATTTCAATTAGACAGCACTGCTCTATGGTGTAAATACATAATTCTAAATACTGTCAGGAGATAAGATGATTAAGAACACAGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCTTCTCGAGTAGCTGGGACTACAGGCGCCCA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=391;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,5:11:3,3,4,1:4 -chr18 31960565 chr18-31960566-DEL-78;pbsv.DEL.537 TCGTCCGGGAGGTTAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCC T 4 PASS ID=chr18-31960566-DEL-78;SVTYPE=DEL;SVLEN=-78;TIG_REGION=h2tg007350l:153104-153104;QUERY_STRAND=+;HOM_REF=0,11;HOM_TIG=0,11;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=262.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:2:5:7 +chr18 31960565 chr18-31960566-DEL-78;pbsv.DEL.537 TCGTCCGGGAGGTTAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCC T 4 PASS ID=chr18-31960566-DEL-78;SVTYPE=DEL;SVLEN=-78;TIG_REGION=h2tg007350l:153104-153104;QUERY_STRAND=+;HOM_REF=0,11;HOM_TIG=0,11;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=262.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:2:5:7 chr18 31968921 pbsv.DEL.538 ATTTAATTTAGAATTTAACTTAGAATTTAA A 2 PASS SVTYPE=DEL;SVLEN=-29;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 32009635 pbsv.INS.539 T TTCTTTCTTTTCTTTCTTTCTT 2 PASS SVTYPE=INS;SVLEN=21;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,6,0:4 chr18 32130972 pbsv.DEL.540 TCAAAGTTTAATACATCCAATATGTCAAGTTAAACCATTCTGGGATTTG T 2 PASS SVTYPE=DEL;SVLEN=-48;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:3,0,0,1:4 @@ -822,9 +822,9 @@ chr18 34947197 pbsv.INS.562 T TATATATATATATATATATATATATATAT 2 PASS SVTYPE=INS;SV chr18 34950995 chr18-34950996-DEL-269 AAATTGTAATTTGCACTTGAGATATTGAATTTTATTGTTGCCACCAAATTCTGTTGTTTTCCTTAGAGTGACAGCAGATTCAGTTCATTCATTTTCTACAAATATACATGCAGAATACTTAAGTCTAAATAATTACGTTTGTCTCATAGCCATTCTTTGAAGTAAAATGGTGTACCATGAAAAAAGAAGTTTAGTTTAGCTCACAACGCTATCACAGGAGTGCTTTTCCTCAACACAACCAACATACTTCAGTATAAAATGAAAACATTT A 4 . ID=chr18-34950996-DEL-269;SVTYPE=DEL;SVLEN=-269;TIG_REGION=h1tg005920l:251556-251556,h2tg006389l:51770-51770;QUERY_STRAND=-,-;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=267.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,8:8:.:8:22:0,0,6,2:7 chr18 34984907 chr18-34984908-DEL-57 TATATAATATATAATATATTTTATGTTATATAATATATAAAATATATTATATATAAAA T 4 . ID=chr18-34984908-DEL-57;SVTYPE=DEL;SVLEN=-57;TIG_REGION=h1tg005920l:217910-217910,h2tg006389l:18140-18140;QUERY_STRAND=-,-;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=268.0 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,6,4:5 chr18 34984912 Sniffles2.DEL.2EAS11 AATATATAATATATTTTATGTTATATAATATATAAAATATATTATATATAAAAT A 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-53;SUPPORT=10;COVERAGE=9,9,9,9,9;STRAND=+-;AF=1;STDEV_LEN=2.582;STDEV_POS=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:27:0:10:2 -chr18 34985249 chr18-34985250-INS-140 A ATATATAATATTATATATTATATAATATATTATATAATATTATATATTATATATTATATTATATTATATAATATATTATATTATATATTATATAATATAATATATAATATAATATATTATATAATATATTATATAATATAT 4 . ID=chr18-34985250-INS-140;SVTYPE=INS;SVLEN=140;TIG_REGION=h1tg005920l:217506-217645;QUERY_STRAND=-;HOM_REF=0,10;HOM_TIG=0,10;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=268.1 GT:DR:DV:GQ:SUPP 0/1:3:6:13:3 +chr18 34985249 chr18-34985250-INS-140 A ATATATAATATTATATATTATATAATATATTATATAATATTATATATTATATATTATATTATATTATATAATATATTATATTATATATTATATAATATAATATATAATATAATATATTATATAATATATTATATAATATAT 4 . ID=chr18-34985250-INS-140;SVTYPE=INS;SVLEN=140;TIG_REGION=h1tg005920l:217506-217645;QUERY_STRAND=-;HOM_REF=0,10;HOM_TIG=0,10;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=268.1 GT:DR:DV:GQ:SUPP 1/0:3:6:13:3 chr18 34985305 pbsv.INS.565 T TATATATTATTTTATATATATAATATAATATATA 2 PASS SVTYPE=INS;SVLEN=33;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,3:10:5,2,1,2:4 -chr18 34985495 chr18-34985496-INS-149 T TTATAAATATAATATATATATTATATTTATAAATATAATATATATTATATTTATAAATATAATATATATATTATTATAAATATAATATATATATTATATATATAAATATAATATATATATTATAATTATAAATATAATATATATATTATA 4 . ID=chr18-34985496-INS-149;SVTYPE=INS;SVLEN=149;TIG_REGION=h1tg005920l:217108-217256;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=268.2 GT:AD:DP:SAC:SUPP 0/1:5,5:10:2,3,4,1:5 +chr18 34985495 chr18-34985496-INS-149 T TTATAAATATAATATATATATTATATTTATAAATATAATATATATTATATTTATAAATATAATATATATATTATTATAAATATAATATATATATTATATATATAAATATAATATATATATTATAATTATAAATATAATATATATATTATA 4 . ID=chr18-34985496-INS-149;SVTYPE=INS;SVLEN=149;TIG_REGION=h1tg005920l:217108-217256;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=268.2 GT:AD:DP:SAC:SUPP 1/0:5,5:10:2,3,4,1:5 chr18 34985538 Sniffles2.INS.C2S11 A ATATATTATATTTATAAATATAATATATATATTATTATAAATATAATATATATATTATATATATAAATATAATATATATATTATAATTATAAATATAATATATATATATATATATAAATATAATATATATATTATATATTATAA 3 PASS PRECISE;SVTYPE=INS;SVLEN=144;SUPPORT=6;COVERAGE=9,9,9,9,9;STRAND=+-;AF=0.667;STDEV_LEN=0.957;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:13:3:6:2 chr18 34985745 pbsv.INS.567 T TATATGTAATATATAAAATATATTAC 2 PASS SVTYPE=INS;SVLEN=25;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,3:10:5,2,1,2:4 chr18 35233388 pbsv.INS.568 A AAATAATAATAATAATAATAATAATAATAATAAT 2 PASS SVTYPE=INS;SVLEN=33;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,10:14:2,2,7,3:4 @@ -839,18 +839,18 @@ chr18 36077637 pbsv.INS.575 A AGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCACCTCCCTCCCG chr18 36093819 pbsv.INS.DUP.576 T TTTTTTTTTTTTTTTTTTTT 0 PASS SVTYPE=INS;SVLEN=19;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 chr18 36221602 pbsv.DEL.577 GTGTTCTGTTCTGTTCTGTTC G 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 chr18 36262253 pbsv.INS.DUP.578 A ACACACACACACACACACACA 0 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 -chr18 36463416 chr18-36463417-INS-1683;pbsv.INS.579 T TAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATATATATTTTTAAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATATATATTTTTTTATTTAAAATATATATATTTTTATTTAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATATATATTTTTATTTAAAAAATATAATATATATTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAATATGTATTTTTATTTAAAAAATATAATATGTATTTTTATTTAAAAACTATAATATGTATTTTTATTTAAAAACTATAATATGTATTTTTATTTAAAAACTGTATGTATTTTTATTTAAAAAAATATATATTTTTATTTAAAAACTATAATATGTATTTTTATTTAAAAACTATAATATGTATTTTTATTTAAAAAAATAATATGTATTTTTATTTAAAAAATATATAATATTTTTTTTTAAAAATATATAATATTTTTTATTTAAAAAATATATAATATATTTTTTATTTAAAAAATATATAATATATTTTTTATTTAAAAAATATATTATATATTTTTTATTTAAAAAATATATTATATATTTTTTATTTAAAAAATATATTATATATTTTTTATTTAAAAAATATATATATTTAAAAATATATACCTTTATTTAAAAATATATATTTCTTTATTTAAAAATATATATTTCTTTATTTAAAAATATATATTTTTGTTTAAAAATATATATTTTTGTATTTAAAAATATATATTTTATTTAAA 4 PASS ID=chr18-36463417-INS-1683;SVTYPE=INS;SVLEN=1683;TIG_REGION=h1tg000134l:50210-51892,h2tg000128l:50210-51892;QUERY_STRAND=-,-;HOM_REF=0,23;HOM_TIG=0,23;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=270.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:4:11:7 +chr18 36463416 chr18-36463417-INS-1683;pbsv.INS.579 T TAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATATATATTTTTAAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAAATATATATTTTTATTTAAAAAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATAATATATATTTTTATTTAAAAAAATATATATTTTTTTATTTAAAATATATATATTTTTATTTAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAAAATATATATATTTTTATTTAAAAAATATAATATATATTTTATTTAAAAAAATATAATATATATTTTTATTTAAAAATATGTATTTTTATTTAAAAAATATAATATGTATTTTTATTTAAAAACTATAATATGTATTTTTATTTAAAAACTATAATATGTATTTTTATTTAAAAACTGTATGTATTTTTATTTAAAAAAATATATATTTTTATTTAAAAACTATAATATGTATTTTTATTTAAAAACTATAATATGTATTTTTATTTAAAAAAATAATATGTATTTTTATTTAAAAAATATATAATATTTTTTTTTAAAAATATATAATATTTTTTATTTAAAAAATATATAATATATTTTTTATTTAAAAAATATATAATATATTTTTTATTTAAAAAATATATTATATATTTTTTATTTAAAAAATATATTATATATTTTTTATTTAAAAAATATATTATATATTTTTTATTTAAAAAATATATATATTTAAAAATATATACCTTTATTTAAAAATATATATTTCTTTATTTAAAAATATATATTTCTTTATTTAAAAATATATATTTTTGTTTAAAAATATATATTTTTGTATTTAAAAATATATATTTTATTTAAA 4 PASS ID=chr18-36463417-INS-1683;SVTYPE=INS;SVLEN=1683;TIG_REGION=h1tg000134l:50210-51892,h2tg000128l:50210-51892;QUERY_STRAND=-,-;HOM_REF=0,23;HOM_TIG=0,23;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=270.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:4:11:7 chr18 36499073 pbsv.DEL.580 TTTTTGTTTTGTTTTGTTTTGTTTTG T 2 PASS SVTYPE=DEL;SVLEN=-25;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:0,3,5,0:4 chr18 36527784 pbsv.DEL.581 TTATATTTGAGTGACATGGAATATC T 2 PASS SVTYPE=DEL;SVLEN=-24;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,6:10:0,4,2,4:4 chr18 36826404 pbsv.DEL.582 CTGTGTGTGTGTGTGTGTGTG C 2 PASS SVTYPE=DEL;SVLEN=-20;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:2,2,3,0:4 chr18 36846941 pbsv.INS.583 C CTCTTCAATTCTTCTTTTTCTCTTC 2 PASS SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:4,2,1,0:4 chr18 36883969 pbsv.INS.584 T TATATATATATATATATATATATATATATATAC 2 PASS SVTYPE=INS;SVLEN=32;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,4:6:1,1,3,1:4 chr18 37000620 pbsv.DEL.585 TTAAGAAATGAAATCATATCAAGTATCTTCTCAGACCACAATGGAA T 2 PASS SVTYPE=DEL;SVLEN=-45;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,5,6:4 -chr18 37283949 chr18-37283950-INS-668;pbsv.INS.586 T TATAGCCCAACACACACATACGCATACACACACCAATACATGCACCATGCATATACCCCAACATACACACACACACACACACTGCAATACACACACCACACATACACCCCAACACACACACACACACATACAGACACCAATACATACACCATGCATATACCCCAACACACACACACCCCCAATACACTCACAACACATACACCCCAACACACACACACCCCCAATACACACACCACACATATACCCCAACACACACACACACACACCCAATACACACACCACACATATACCCCAACACACACACACCAATACATGCACCAACACATATACCCCAACATACACACACACCCCCAACACACACCAAAGCATATACGCCAACACACACACACATACACAGCAATGCATTACCCCAACATACACACACAGACACACACACAATACACACACCAATACACACCAATGCATATACCCCAACATACACACATATAGCAACATACACCCTAACACACATACATACACATACACACACCAAATAGACACACACCCCAACACACACAACCAACACCCCCACACACCCAACACACACACATACACGTACACACACATCAACACATAACTATGCACCCCAACACACACACACACACACAACATACACACATATACACATAC 4 PASS ID=chr18-37283950-INS-668;SVTYPE=INS;SVLEN=668;TIG_REGION=h1tg003000l:45410-46077;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=271.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:4:11:7 +chr18 37283949 chr18-37283950-INS-668;pbsv.INS.586 T TATAGCCCAACACACACATACGCATACACACACCAATACATGCACCATGCATATACCCCAACATACACACACACACACACACTGCAATACACACACCACACATACACCCCAACACACACACACACACATACAGACACCAATACATACACCATGCATATACCCCAACACACACACACCCCCAATACACTCACAACACATACACCCCAACACACACACACCCCCAATACACACACCACACATATACCCCAACACACACACACACACACCCAATACACACACCACACATATACCCCAACACACACACACCAATACATGCACCAACACATATACCCCAACATACACACACACCCCCAACACACACCAAAGCATATACGCCAACACACACACACATACACAGCAATGCATTACCCCAACATACACACACAGACACACACACAATACACACACCAATACACACCAATGCATATACCCCAACATACACACATATAGCAACATACACCCTAACACACATACATACACATACACACACCAAATAGACACACACCCCAACACACACAACCAACACCCCCACACACCCAACACACACACATACACGTACACACACATCAACACATAACTATGCACCCCAACACACACACACACACACAACATACACACATATACACATAC 4 PASS ID=chr18-37283950-INS-668;SVTYPE=INS;SVLEN=668;TIG_REGION=h1tg003000l:45410-46077;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=271.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:4:11:7 chr18 37337987 chr18-37337988-DEL-210;pbsv.DEL.587 CCATTGTCATCACTACTGTCACTGCCACCACCACCACTGTCGCTGCCACCATCTGTTACCTTAACCTTGTCACTATGACTGTCACTGACACCATTGTCACCACTATCATTGTCACCACTACTGTCACTGCCACCACCACCACTGTCGCTGCCACCATCTGTTACCTTAACCTTGTCACTATGACTGTCACTGACACCATTGTCACCACTAT C 4 PASS ID=chr18-37337988-DEL-210;SVTYPE=DEL;SVLEN=-210;TIG_REGION=h1tg012019l:51977-51977,h2tg011640l:51977-51977;QUERY_STRAND=+,+;HOM_REF=0,8;HOM_TIG=0,8;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=272.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:3:1:7 chr18 37686617 pbsv.INS.588 G GATGGTTCTGGCCATTTAATGCCAGA 2 PASS SVTYPE=INS;SVLEN=25;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,0,1:4 -chr18 37726097 chr18-37726098-DEL-565 TAAAGCTCACAGTGCTGAGTCCCAGGGTCTTATAATACACTTCTGAAATACTCCTTCTCTAAGCTCTGTGTTGGCTAAATTCTAGGGCAAGGCCGAACATCAGTCTCAGAATGTTTTCTTAAATAAGGGAATGGAAAAAAGCAGAAACCATCCAGCCTTGTCCCAATGCACAGACTTGCTCTGTTCCCTTACGGTGAATGCATTCTCTTTAGGCCCACCCTGTTTTTTCACGCCATCCAACTGGAGCCAGTGTTTATTTCCAAGGTTGTGTTATATGATGGGGAAAAGTTCTCTGGAGGAAAATTCTGGGGCTCATTAAACAGTGGGTAGAAGAGGAGGAAAGAATGAGGGAGGGAAGTAAAGAGAAAATTATACCAGGATGATGTTTTCTTTTCCTGTAGGAAAGAATCTAAAATAATTGCATCTCTTGTTTAGAGCATTTTTATTTTTCACACTTCATTCCTGTTGATGCAAAGGAATGAGTTACGAGATTGCATTCTTAGGGGGAAACTCTCCCCAGGAAATACATTGCTGTGTCCACAGGACTTTTTAGGTCATTGAGGGAA T 4 . ID=chr18-37726098-DEL-565;SVTYPE=DEL;SVLEN=-565;TIG_REGION=h1tg008976l:507338-507338;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=273.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,4:7:2:4:8:1,2,1,3:7 -chr18 37735658 chr18-37735659-DEL-318;pbsv.DEL.590 ACCTACTGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGGGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC A 4 PASS ID=chr18-37735659-DEL-318;SVTYPE=DEL;SVLEN=-318;TIG_REGION=h1tg008976l:498333-498333;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=274.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:5:6:7 +chr18 37726097 chr18-37726098-DEL-565 TAAAGCTCACAGTGCTGAGTCCCAGGGTCTTATAATACACTTCTGAAATACTCCTTCTCTAAGCTCTGTGTTGGCTAAATTCTAGGGCAAGGCCGAACATCAGTCTCAGAATGTTTTCTTAAATAAGGGAATGGAAAAAAGCAGAAACCATCCAGCCTTGTCCCAATGCACAGACTTGCTCTGTTCCCTTACGGTGAATGCATTCTCTTTAGGCCCACCCTGTTTTTTCACGCCATCCAACTGGAGCCAGTGTTTATTTCCAAGGTTGTGTTATATGATGGGGAAAAGTTCTCTGGAGGAAAATTCTGGGGCTCATTAAACAGTGGGTAGAAGAGGAGGAAAGAATGAGGGAGGGAAGTAAAGAGAAAATTATACCAGGATGATGTTTTCTTTTCCTGTAGGAAAGAATCTAAAATAATTGCATCTCTTGTTTAGAGCATTTTTATTTTTCACACTTCATTCCTGTTGATGCAAAGGAATGAGTTACGAGATTGCATTCTTAGGGGGAAACTCTCCCCAGGAAATACATTGCTGTGTCCACAGGACTTTTTAGGTCATTGAGGGAA T 4 . ID=chr18-37726098-DEL-565;SVTYPE=DEL;SVLEN=-565;TIG_REGION=h1tg008976l:507338-507338;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=273.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:3,4:7:2:4:8:1,2,1,3:7 +chr18 37735658 chr18-37735659-DEL-318;pbsv.DEL.590 ACCTACTGTGATTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGGGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC A 4 PASS ID=chr18-37735659-DEL-318;SVTYPE=DEL;SVLEN=-318;TIG_REGION=h1tg008976l:498333-498333;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=274.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:5:6:7 chr18 37780490 chr18-37780491-INS-630 C CACACACATATGCCACCCCACAGGGTTCACACATGCACCCCACAGACACACACACAGAACTCACAAACATACACCACCCCCCACACACACAGAACTCACACACACACACCACCCTGCAGAGTTCACACATGCACCCCACAGACACACACACAGAACTCACACACACCATCCCACAGAGTTCACACATGCACCCCACAGACACACAGAACTCACACACATACACAATCCCTCAGAGTTCACACATACACCCCACAGACACACACACAGAACTCACAAACATACACCACCCCACAAAGCTCTCATGCACCCCCAGACACACACACAGAACTCATACACATACATCACCCTGCAGAGTTCACACATGGACCCCCAGACACACACACGAAACTCATATACACACACCACCCCACAGAGTTCACACATGCACCCCACAGACACATACACAGAACTCACACACATACACCACCCGCAGAGTTCACACATGCACCTCACAGACACACACGGAACTCACGGAACTCACACATATACACCAGCCCACAGAACTCACACATGCACCCCCAGACACACACACACAACTCACACACACTGCCTCACAGAGCTCACACATGTACCCCCAGACACACAGAACTCA 4 . ID=chr18-37780491-INS-630;SVTYPE=INS;SVLEN=630;TIG_REGION=h1tg008976l:453196-453825,h2tg010610l:22415-23043;QUERY_STRAND=-,+;HOM_REF=0,9;HOM_TIG=0,9;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=275.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,7:8:.:7:19:0,1,5,2:7 chr18 37780908 pbsv.DEL.592 AGCTCACACATGCACCCCACAGACACACACACACACACCACCCCACAGG A 2 PASS SVTYPE=DEL;SVLEN=-48;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 chr18 37813797 pbsv.INS.DUP.593 T TATCTATCTATCTATCTATCTAT 0 PASS SVTYPE=INS;SVLEN=22;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,13:13:0,0,6,7:4 @@ -861,13 +861,13 @@ chr18 38282666 pbsv.INS.DUP.597 A AAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAA 0 PASS SVTYPE chr18 38399797 Sniffles2.INS.CAS11 A TAATAATTATTATTATAGGTTCATTCAGCAAACTAAGTGTGGCAAGACAAAATATATAATTACCAAAATGACCATAGTTTAACATTAGATAAATAACCAATGTTATTCACTACATTGATAGATTATGGGAGAAAAATAAAACAGCTACCT 3 PASS PRECISE;SVTYPE=INS;SVLEN=150;SUPPORT=2;COVERAGE=6,6,6,6,5;STRAND=+;AF=0.333;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=276.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:4,2:6:3,1,2,0:6 chr18 38472214 pbsv.DEL.599 CTACCATAATGGTAATACCAATATGGTAG C 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,9:13:1,3,5,4:4 chr18 38518167 pbsv.INS.600 C CTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTG 2 PASS SVTYPE=INS;SVLEN=32;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,9,2:4 -chr18 38565776 chr18-38565777-INS-150 T TCCCCCTCTTTTTCTCTTTGTCCCTCTTTCTCTCTTTTCTCCCTCTCTCCCTCTCTTTCTCCCTCTCTCCCTCTTTCTCCCTCTTTCTTTCCTTCACTCTCTCTCTTTCTTTCCTTCTCTCTCCCTCTTTCTTTCCTTCTCTCCCCCTCTC 4 . ID=chr18-38565777-INS-150;SVTYPE=INS;SVLEN=150;TIG_REGION=h1tg012747l:100176-100325;QUERY_STRAND=+;HOM_REF=0,15;HOM_TIG=0,15;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=277.0 GT:DR:DV:GQ:SUPP 0/1:2:4:8:3 -chr18 38565969 chr18-38565970-INS-1020 T TCCCCCTCCCCCTCCCCCTCTCCCCCTCCCCCTCCCCCCTCCCCCTCTCCCCCTCCCCCTCTCCCCATCCCCCCTCCCCCTCCCCCCTCCCCCCTCCCCCTCTCCCGCTCCCCCTCCCCCTCCCCCTCTCCCGCTCCCCCCCCTCTCCCGCTCCCCCCCCTCTCCCGCTCCCCCCCTCTCCCGCTCCCCCCTCTCCCGCTCCCCCCTCTCCCGCTCGCCCCCTCTCCCGCTCGCCCCCTCTCCCGCTCCCCCCCCTCTCCCCCCCTCTCCCCTGTCTCTGTCTCTCCCCGTCTCTGTCTCTCCCCATCTCTCTCTCCCCATCTCTCTCTCCCCATCTCTGTCTCTCCCCGCCTGTCTCTCCCCGTCTCTGTCTCTCCCCCCCTCTGTCTCTCCCCCCCTCTGTCTCTCCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTCCCCCCCTCTCTCCCCCCCTCTCTCCCCCCCTCTCTCCCCCCCCCCTCTCCCCCCCCTCTCCCCCCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCCTCCCCCCTCCCCCCTCCCCCCTCCCCCCTCCCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCCTCTCTCCCCCCTCTCTCCCCCTCTCTCCCCCCTCTCTGTCCCTCCCCCCCTCTCTGTCCCTCCCCCCCTCTCTGTCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCC 4 . ID=chr18-38565970-INS-1020;SVTYPE=INS;SVLEN=1020;TIG_REGION=h1tg012747l:100519-101538;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,7;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=277.1 GT:DR:DV:GQ:SUPP 1/1:.:6:16:3 +chr18 38565776 chr18-38565777-INS-150 T TCCCCCTCTTTTTCTCTTTGTCCCTCTTTCTCTCTTTTCTCCCTCTCTCCCTCTCTTTCTCCCTCTCTCCCTCTTTCTCCCTCTTTCTTTCCTTCACTCTCTCTCTTTCTTTCCTTCTCTCTCCCTCTTTCTTTCCTTCTCTCCCCCTCTC 4 . ID=chr18-38565777-INS-150;SVTYPE=INS;SVLEN=150;TIG_REGION=h1tg012747l:100176-100325;QUERY_STRAND=+;HOM_REF=0,15;HOM_TIG=0,15;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=277.0 GT:DR:DV:GQ:SUPP 1/0:2:4:8:3 +chr18 38565969 chr18-38565970-INS-1020 T TCCCCCTCCCCCTCCCCCTCTCCCCCTCCCCCTCCCCCCTCCCCCTCTCCCCCTCCCCCTCTCCCCATCCCCCCTCCCCCTCCCCCCTCCCCCCTCCCCCTCTCCCGCTCCCCCTCCCCCTCCCCCTCTCCCGCTCCCCCCCCTCTCCCGCTCCCCCCCCTCTCCCGCTCCCCCCCTCTCCCGCTCCCCCCTCTCCCGCTCCCCCCTCTCCCGCTCGCCCCCTCTCCCGCTCGCCCCCTCTCCCGCTCCCCCCCCTCTCCCCCCCTCTCCCCTGTCTCTGTCTCTCCCCGTCTCTGTCTCTCCCCATCTCTCTCTCCCCATCTCTCTCTCCCCATCTCTGTCTCTCCCCGCCTGTCTCTCCCCGTCTCTGTCTCTCCCCCCCTCTGTCTCTCCCCCCCTCTGTCTCTCCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTCCCCCCCTCTCTCCCCCCCTCTCTCCCCCCCTCTCTCCCCCCCCCCTCTCCCCCCCCTCTCCCCCCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCCTCCCCCCTCCCCCCTCCCCCCTCCCCCCTCCCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCCTCTCTCCCCCCTCTCTCCCCCTCTCTCCCCCCTCTCTGTCCCTCCCCCCCTCTCTGTCCCTCCCCCCCTCTCTGTCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCC 4 . ID=chr18-38565970-INS-1020;SVTYPE=INS;SVLEN=1020;TIG_REGION=h1tg012747l:100519-101538;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,7;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=277.1 GT:DR:DV:GQ:SUPP 1/0:.:6:16:3 chr18 38565971 pbsv.INS.601 T TCCCTCTTTCTCCCTCTCTCCCTCTCTCCCTCTCTTTCTCCCTCTCCCTCTTTCTCCCTCTCTTTCTCCCTCTCTTTCTCCCTCTCTTTCTCCCTCTCTTTCTCCCTCTTTCTCTCTCTCTTTCTCCCTCTCTCCCTTTATCTCTCTCCCCCTCCCCCTCCCCCTCTCCCCCTCCCCCTCCCCCCTCCCCCTCTCCCCCTCCCCCTCTCCCCATCCCCCCTCCCCCTCCCCCCTCCCCCCTCCCCCTCTCCCGCTCCCCCTCCCCCTCCCCCTCTCCCGCTCCCCCCCTCTCCCGCTCCCCCCCTCTCCCGCTCCCCCCCTCTCCCGCTCCCCCCTCTCCCGCTCCCCCCTCTCCCGCTCGCCCCCTCTCCCGCTCGCCCCCTCTCCCGCTCCCCCCCCTCTCCCCCCCTCTCCCCTGTCTCTGTCTCTCCCCGTCTCTGTCTCTCCCCATCTCTCTCTCCCCATCTCTCTCTCCCCATCTCTGTCTCTCCCCGCCTGTCTCTCCCCGTCTCTGTCTCTCCCCCCCTCTGTCTCTCCCCCCCTCTGTCTCTCCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTTCCCCCCTCTGTCTCTCCCCCCCTCTCTCCCCCCCTCTCTCCCCCCCTCTCTCCCCCCCCTCTCTCCCCCCCCTCTCCCCCCCTCTCCCCCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCGCCTCTCTCTCCCCCTCCCCCCTCCCCCCTCCCCCCTCCCCCCTCCCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCCTCTCTCCCCCCTCTCTCCCCCCTCTCTCCCCCCTCTCTGTCCCTCCCCCCCTCTCTGTCCCTCCCCCCCTCTCTGTCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCCCCCCTCTCTGTCTCTCCCC 2 PASS SVTYPE=INS;SVLEN=1173;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,3,3:4 chr18 38581509 pbsv.INS.602 C CTTTCTCTCTCTTTCTTCTCT 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,7:8:0,1,4,3:4 chr18 38850712 pbsv.INS.DUP.603 G GTAAGAGGTGAGATATGGTCTC 0 PASS SVTYPE=INS;SVLEN=21;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,1,5:4 chr18 38920545 pbsv.INS.604 G GCCCCCCCCCCCCCCCCCCCCCCCCA 2 PASS SVTYPE=INS;SVLEN=25;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:4,3,0,1:4 -chr18 38932568 chr18-38932569-INS-318;pbsv.INS.605 C CAAAAGCAAATTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA 4 PASS ID=chr18-38932569-INS-318;SVTYPE=INS;SVLEN=318;TIG_REGION=h1tg012747l:468126-468443;QUERY_STRAND=+;HOM_REF=0,14;HOM_TIG=0,14;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=278.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:6:4:23:7 +chr18 38932568 chr18-38932569-INS-318;pbsv.INS.605 C CAAAAGCAAATTTGAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCTGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAA 4 PASS ID=chr18-38932569-INS-318;SVTYPE=INS;SVLEN=318;TIG_REGION=h1tg012747l:468126-468443;QUERY_STRAND=+;HOM_REF=0,14;HOM_TIG=0,14;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=278.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:6:4:23:7 chr18 38934640 pbsv.DEL.606 TTATATATATATATATATATATA T 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,6,4:4 chr18 38949179 pbsv.INS.607 A AAGGAAGGAAGGAAGGGAGGGAGGG 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,3:5:1,1,1,2:4 chr18 39060964 pbsv.INS.608 C CAAAGAAAGAAAGAAAGAAAG 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,6,2:4 @@ -887,7 +887,7 @@ chr18 39965342 chr18-39965343-DEL-150 ATTATTTTAAAATGTCATCATGAATATGATCTTTGTGCTGGT chr18 39965498 chr18-39965499-INS-151 A AACGGAGGAGGAGGAAAAGAGAGAGATCTCTCTCAACAACAACAACGGAGGAGGAGGAAAAGAGAGAGATCTCTCTCAACAACAACAACGGAGGAGGGAGGAAAAGAGAGAGATCTCTCTCACAACAACAACGGAGGAGGAGGAAAAGAGAG 4 . ID=chr18-39965499-INS-151;SVTYPE=INS;SVLEN=151;TIG_REGION=h2tg021381l:78242-78392;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,1;AC=1 GT:SUPP 0/1:1 chr18 39971207 chr18-39971208-DEL-420 ATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATTATACAATTATATATGTTATATATAATACAATTATATATGTTATATATAATTATACAATTATATATGTTATATATAATTATACAATTATATATGTTATATATAATTATACAATTATATATATGTTATATATAATCATACAATTACATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAAT A 4 . ID=chr18-39971208-DEL-420;SVTYPE=DEL;SVLEN=-420;TIG_REGION=h2tg021381l:84101-84101;QUERY_STRAND=+;HOM_REF=0,222;HOM_TIG=0,222;AC=1 GT:SUPP 0/1:1 chr18 39971266 Sniffles2.DEL.2F6S11 TATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATTATACAATTATATATGTTATATATAATACAATTATATATGTTATATATAATTATACAATTATATATGTTATATATAATTATACAATTATATATGTTATATATAATTATACAATTATATATATGTTATATATAATCATACAATTACATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATT T 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-362;SUPPORT=3;COVERAGE=7,7,7,7,8;STRAND=+-;AF=0.429;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:18:4:3:2 -chr18 39971508 pbsv.DEL.619 TATACAATTATATATGTTATATATAATTATACAATTATATATATGTTATATATAATCATACAATTACATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATTATACAATTATATATGTTATATATA T 2 PASS SVTYPE=DEL;SVLEN=-482;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=287.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:3:4:18:6 +chr18 39971508 pbsv.DEL.619 TATACAATTATATATGTTATATATAATTATACAATTATATATATGTTATATATAATCATACAATTACATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATCATACAATTATATATATGTTATATATAATTATACAATTATATATGTTATATATA T 2 PASS SVTYPE=DEL;SVLEN=-482;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=287.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:4:18:6 chr18 40000412 chr18-40000413-INS-82;pbsv.INS.620 T TATTTTATAGATCATTTGTTGTATTTTATGTAGATATATTATTTTTGATTTGACAGATTTTTTCCTTTTAAATTCTTATAGTA 4 PASS ID=chr18-40000413-INS-82;SVTYPE=INS;SVLEN=82;TIG_REGION=h2tg021381l:112884-112965;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=288.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:3:16:7 chr18 40069075 chr18-40069076-INS-87 T TAGAAATAACAAAGGTTAGAAACCTTTGCAGCTCATTGCAGAGTGGCAGCCACATGACAGCATATCATTGGTAAAATGTAGAAAAGTA 4 . ID=chr18-40069076-INS-87;SVTYPE=INS;SVLEN=87;TIG_REGION=h1tg011003l:167242-167328;QUERY_STRAND=-;HOM_REF=0,66;HOM_TIG=0,66;AC=1 GT:SUPP 1/0:1 chr18 40167292 pbsv.DEL.621 CATATATATATATATATATATATATATATAT C 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 @@ -896,11 +896,11 @@ chr18 40385185 pbsv.DEL.623 AATATATATATATATATATAT A 2 PASS SVTYPE=DEL;SVLEN=-20; chr18 40426234 pbsv.INS.624 A ATTTTTTTTTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=21;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,6,6:4 chr18 40429467 pbsv.INS.625 T TTCTTTTTCTTTATGAGGTGTGAGGTTTGAGATAATA 2 PASS SVTYPE=INS;SVLEN=36;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,5,5:4 chr18 40489007 pbsv.DEL.626 GTATATATATATATATATATATATATATA G 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:0,2,0,1:4 -chr18 40598044 chr18-40598045-INS-192;pbsv.INS.627 G GGTTCAGATAATTAGAAAATTGAAACAAACATCCAAATATCTAATTTATATATACACATATGTATTGCATATATATATTGCATATTTATATGTATTGCACATACAATATATGCAATACATATGTGTATATATAAATTAGATATTTGGATGTTTGTTTCAATTTTCTAATTATCTGAACCTTTATCTCCTAAAT 4 PASS ID=chr18-40598045-INS-192;SVTYPE=INS;SVLEN=192;TIG_REGION=h2tg005474l:89666-89857;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=290.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:7:19:7 -chr18 40768190 chr18-40768191-INS-317;pbsv.INS.628 T TAAGAGAGCAGTGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA 4 PASS ID=chr18-40768191-INS-317;SVTYPE=INS;SVLEN=317;TIG_REGION=h1tg000523l:10705-11021;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=291.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:5:26:7 +chr18 40598044 chr18-40598045-INS-192;pbsv.INS.627 G GGTTCAGATAATTAGAAAATTGAAACAAACATCCAAATATCTAATTTATATATACACATATGTATTGCATATATATATTGCATATTTATATGTATTGCACATACAATATATGCAATACATATGTGTATATATAAATTAGATATTTGGATGTTTGTTTCAATTTTCTAATTATCTGAACCTTTATCTCCTAAAT 4 PASS ID=chr18-40598045-INS-192;SVTYPE=INS;SVLEN=192;TIG_REGION=h2tg005474l:89666-89857;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=290.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:7:19:7 +chr18 40768190 chr18-40768191-INS-317;pbsv.INS.628 T TAAGAGAGCAGTGTAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA 4 PASS ID=chr18-40768191-INS-317;SVTYPE=INS;SVLEN=317;TIG_REGION=h1tg000523l:10705-11021;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=291.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:5:26:7 chr18 40792318 pbsv.DEL.629 CCTTTCTTTCTTTCTTTCTTT C 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:2,1,2,3:4 chr18 40810052 chr18-40810053-INS-101 G GATATATAATATATTATTATATATTATATATAATATATTATTATATAATATATATAATATATAATAATATATTATATATAATATATAATAATATATTATATA 4 . ID=chr18-40810053-INS-101;SVTYPE=INS;SVLEN=101;TIG_REGION=h1tg018943l:8599-8699;QUERY_STRAND=+;HOM_REF=0,9;HOM_TIG=0,9;AC=1 GT:SUPP 1/0:1 -chr18 40810052 chr18-40810053-INS-125 G GATATATAATATATTATTATATATTATATATAATATATTATTATATAATATATATAATATATAATAATATATTATATATAATATATAATAATATATTATATAATATATATAATAATATATTATATA 4 . ID=chr18-40810053-INS-125;SVTYPE=INS;SVLEN=125;TIG_REGION=h2tg001747l:119822-119946;QUERY_STRAND=+;HOM_REF=0,9;HOM_TIG=0,9;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=292.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,11:11:.:11:30:0,0,5,6:7 +chr18 40810052 chr18-40810053-INS-125 G GATATATAATATATTATTATATATTATATATAATATATTATTATATAATATATATAATATATAATAATATATTATATATAATATATAATAATATATTATATAATATATATAATAATATATTATATA 4 . ID=chr18-40810053-INS-125;SVTYPE=INS;SVLEN=125;TIG_REGION=h2tg001747l:119822-119946;QUERY_STRAND=+;HOM_REF=0,9;HOM_TIG=0,9;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=292.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,11:11:.:11:30:0,0,5,6:7 chr18 40830808 pbsv.INS.DUP.631 G GAGAGAGAGAGAGAGAGAAAGAG 0 PASS SVTYPE=INS;SVLEN=22;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,3,1:4 chr18 40895972 pbsv.INS.632 C CTGTGTGTGTGTGTGTGTGTGTG 2 PASS SVTYPE=INS;SVLEN=22;AC=1 GT:AD:DP:SAC:SUPP 0/1:9,3:12:7,2,1,2:4 chr18 40933615 pbsv.DEL.633 TATATATATATATATATATATATATATATACACAC T 2 PASS SVTYPE=DEL;SVLEN=-34;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,4,1:4 @@ -908,15 +908,15 @@ chr18 40956637 pbsv.DEL.634 AGTGTGTGTGTGTGTGTGTGTGTGTGTGT A 2 PASS SVTYPE=DEL;SV chr18 40963883 pbsv.DEL.635 AAAAATAAAATAAAATAAAAT A 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,4,3:4 chr18 40983887 Sniffles2.INS.D5S11 C CCTCCTCCTCCACCTTCTCCTCCTCCTCCTTCTCCACCTTCTCCTCCTCTTCCA 3 PASS PRECISE;SVTYPE=INS;SVLEN=51;SUPPORT=5;COVERAGE=5,5,5,5,5;STRAND=+-;AF=1;STDEV_LEN=2.517;STDEV_POS=4.619;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=293.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:0,5:5:0,0,2,3:6 chr18 41055532 pbsv.INS.637 A ATTATTACATTCAAATGCATTTGTT 2 PASS SVTYPE=INS;SVLEN=24;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,2,5:4 -chr18 41058698 chr18-41058699-INS-81 T TTTTTTCCTCAAATCTTTGCATCTCATTCCACTGTTACTCTCTTCTTTGCCTTTTACTGGGATTCTTGTCATAGCTTTATTA 4 . ID=chr18-41058699-INS-81;SVTYPE=INS;SVLEN=81;TIG_REGION=h1tg015908l:55321-55401,h2tg015392l:55321-55401;QUERY_STRAND=+,+;HOM_REF=0,90;HOM_TIG=0,90;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=294.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,3:5:2:3:11:1,1,0,3:7 +chr18 41058698 chr18-41058699-INS-81 T TTTTTTCCTCAAATCTTTGCATCTCATTCCACTGTTACTCTCTTCTTTGCCTTTTACTGGGATTCTTGTCATAGCTTTATTA 4 . ID=chr18-41058699-INS-81;SVTYPE=INS;SVLEN=81;TIG_REGION=h1tg015908l:55321-55401,h2tg015392l:55321-55401;QUERY_STRAND=+,+;HOM_REF=0,90;HOM_TIG=0,90;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=294.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:2,3:5:2:3:11:1,1,0,3:7 chr18 41140265 pbsv.INS.DUP.639 T TAGAATTGTGAACTAGGAGTTTGCAGCTTG 0 PASS SVTYPE=INS;SVLEN=29;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,2:2:0,0,2,0:4 chr18 41257090 pbsv.INS.640 T TGTATCTTAGCAAAAGTTTCTCA 2 PASS SVTYPE=INS;SVLEN=22;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,3,7:4 chr18 41284353 pbsv.DEL.641 GGAAGGAAGGAAGGAAGGAAG G 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:0,1,1,3:4 chr18 41284820 chr18-41284821-DEL-3550 AATGAAAGTAAGTTTTGTGTGTGTTTGTGTGAATCTTGACAAACTGATTTTAAAGTTCATATGGAGAGGAAAATGACCCAGAATAGCCACCACAATGTTGAGGGAGAACAAAGTGAGAAGACAGCACTACCCAACTTCAAGACTTGCTGAAAAGCTACAGCAATCAAGATAGTGAGGTATTGGTAAAAGATAAAAAAACAGGTCAATGAAACAACATAGTGTACTCAGACATAACCCACATAATATACTCAACTGATCTTTGACAAAGGTGCAAGTTCAAGACAATGGAGCAAAGATAGTCTTTTCAATAAATAGTGGTAAGAAAACTAGGCATAACATGCAAGAATAAAATGTAAATCTAGATATAGACCTTATGATCTTCACAAAAATTAATTCAAAATGAACTTTAGAGCTCAATTTAAAATGTAAAATTATAAAGCTCCTAGAAGGTAACATCAGAGAGAAACTAGGTGACCTTGGTTTGGTGTTAACTTTTTAGAAACAACACCAGAAGTATGACCCATGAAAGAAAGAATTGATAAGCTGGACTTAACTAAAATTAAATACTTCTGTTTTGAGAAAGGCACTATCAAGATCATTGGACCACAAGCAACAGACTGAAAGAAAATATCTGCAAAAGATAGATCTGATAAAGGCGAGTCATTTAAAATATTCAAATATCTTTGAAAACTCAACCATAAGAACCCAAAAAACCTAGTTAAAAAATGGGCAAAATGTCTGAATAGGCACCCTACCAAAGAAGATATAGATAAGGTAAATGATCATATGAAAAGATATTCAACATCTTATGTCATTAGGGAATTGCAAACTCAAACAACAGTGAGATGCCGCTGCACACCAATTAGAATGGCCAAAATTCAAAACACAGCACCAAATACTGGCCAGGGTGTGATGAAACAGAAACTTACTCATCTTTGGTAGAAATGCAAAATGGTATAGCCACTTTGGAAGACAGTTTGATAGTTTCTTTAAAAAGTAAACATGTTCTTACCATACATATGATCTTGAAATCATGCCACTTGGCATTTACCCAAAGGAGCTGAAAACTATATCCACACAAAATCCTGCACATGGATGTTTATGACAACTTTATTTACAATTGCCAAAGGTTTGAAGCAACCAAGATGTCCTTTAGTAGATTGATACATAAACTGTGGTACATCCAGACAATGAAATATTGTATTTTTCCATTTTCACACTGCTGATAAAGACATACCCAAGACTGCATAATTTATACAGGAAAAGGGTTTAATGGACTTACACTTCCATGTGGCTGGGGAGGCCTCACAATCATGGAAGAAGTCAAGGAGGAGCAAGTCACATCTTACATAGATGGCAGCAGGCAAAGAGAGCTTGTGCAGGGAAAAATCCCATTTTTAAAACCATAAAATCTCATGAGACGTATTCACTGTCAGAAGAACAGCACAGGAAAGACCTGCCCCCATGATTCACTACCTCCCACCAGGTTCCTCCTATGACATGTGGGAACTGTGGGAGTTACAATTCAAGATGAGATCTGGGTGGGGACACAGCCAAACCTTATCAAATATTATTTAGCATTAAAAAAACTGTAAAGCCATAAAAATATATGGACAAAACTTAAATGAATATTATTAACTGAAAGAAGACAATCTTAAAAAAAGACATACTGTGTAATTCCAAATATACGGTATTCTGGAAAAGTCAAAATGTGGAGATAATACAATTAAAGTGGCTGAGAATGGTGGCTCACGTCTGTCATATTAGTACTTGGCAGGCTGATATGGCATCATCACTTAAGGCCAAGGGTTTGAGGCTAGCCTGGGCATCACAGCAAGAACCCATCCCTACAAGAAAAATTTTTAAAAGTTACCTAGACATGGTGGCATACGCCTGTAGTCATAGCTACTTGGGAGGCTGGGGCAAGAAGATTGCTTGAGCCCCGGAATTTCAGGCTGCAGTGACCTATGCTAATGCCACTGCTCTCCTGCCTGAGTGACAGAGTGAGATTCTGTCTCTTAAAAACAAACAAACAAACAAAAAGATTGAAGGGATGAATAGGTAGAGCACAGACAAGTCTTAGGTCTGTCAATATTCTGTATGATACTATAATAATGGATGTATGTCATCATACATTTATTTATATCCACAGAATGTAAAACACCAGGAGTAAATTCTATTTTAAACTCTGGGCGTTTTGTGATAATGATGCATTAATGAAAGTTCATCAGTGATGTAACAAATGCACTACTGCCATGTGGAATGTTGATACTGGGGGAGTTTGCCATGTGTGAGGACAGCAGGTATATGAAAACTCCCTGCACTTTCTGCTTAATTTTGCTGTGAACCTAAAGCTGCTCTATATAATAAAGTTTATTAATTAAAAAAACCTCTGTTACAGCAAAATTGAGTAACAGACACCATATTTTTCCTCCTGCCCCCCCCCCCAAAATTAACAAAGTATAGAAAACAATGACTCTGAGAAGAGTGAACATTAGACAGTGAGGACATTGTTTCCTGAGAGAGGAAAAAATAATAATAATATGTAACAAATGATTTCCCCAGCTTACTGCTCACATAGTTTCTAAGCCATGATGCAAAAACAGGGCTAGTTCATGGCAATTTTGACAGGATTCACTTATGTCACCCCAAATCTCTCAAGTTTTGTCAGTATTCCAGTTCAGTCAGGCAAAGAATGGCTGAGTAAACAAGAAGCTTTGTTATTTCTTTCAGTGTTGGTTTCTATACCTCAAAATACCTCAGTAAATCTCAAGTAGAATAAATTGAAATAAGATAAACACAAATAATCTTAACACATTATAGTTAAGTTGAATGCCACAGACAAAGGAAATATTTTGAAAGCAACAAGATGAAAACAACATATATGCAGATGTACAATATCATTAATGACTGTTTTTATGCCAGAAATAAAATAGGCCAGAAACCAATGCAATGACAAATTGTTTGAATGAAATGTCAGCCAACTATTCTATATTCGGCAAAGCTACTTAAATGAAATGGACCACCACAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGTGGGCAGATCATGAGGTCAAGATATAGAGACCATCCTGGACAACATGGTGAAATCCTGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGCGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGGAGGAGAACCTCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCAGAGATTGCACCACTACACTCCAGCCTGGTGACAAAGCGAGACACTGTCTCAAAAATATATATATATATATAATAAAAATAAGATGAAATACAGACATCCTCAGATGAACAAAGACTCGAGTAATTCATGGCTAGCAGGCATGACTTAAAGGAAAAACTAACGGAAACCCTGTAGGCCAAAGGAACGTAACACTAGACAGTAACTCTAACTCTAATTCAAGAGAGAATGTGCAGGAAGCCATAAACAGTAAACATAATAATCTATATTATGTAATTTAATAAAAAATACATTGCTTTAAAAATC A 4 . ID=chr18-41284821-DEL-3550;SVTYPE=DEL;SVLEN=-3550;TIG_REGION=h1tg026557l:5343-5343,h2tg007997l:141255-141255;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=295.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,3:3:.:3:8:0,0,1,2:7 chr18 41318198 pbsv.INS.643 T TATATATATATGATATATGAG 2 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 -chr18 41348946 chr18-41348947-DEL-128 AATATATTATACATTATATGTATAATATATAATATATATTAATATATATTATACATTATATGTATAATATATAATATATATTAATAATATATTATACATTATATGTATAATATATAATATATATTAATG A 4 . ID=chr18-41348947-DEL-128;SVTYPE=DEL;SVLEN=-128;TIG_REGION=h2tg007997l:201840-201840;QUERY_STRAND=+;HOM_REF=0,43;HOM_TIG=0,34;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=296.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,3,2:7 +chr18 41348946 chr18-41348947-DEL-128 AATATATTATACATTATATGTATAATATATAATATATATTAATATATATTATACATTATATGTATAATATATAATATATATTAATAATATATTATACATTATATGTATAATATATAATATATATTAATG A 4 . ID=chr18-41348947-DEL-128;SVTYPE=DEL;SVLEN=-128;TIG_REGION=h2tg007997l:201840-201840;QUERY_STRAND=+;HOM_REF=0,43;HOM_TIG=0,34;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=296.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,5:5:.:5:13:0,0,3,2:7 chr18 41349778 Sniffles2.INS.D7S11 A TATATACAATATATATATATAATATATATATAATATATAATATATATTATATATAATATATATATATATATAATATATATTAATATATAAT 3 PASS PRECISE;SVTYPE=INS;SVLEN=98;SUPPORT=5;COVERAGE=5,5,5,4,3;STRAND=+-;AF=1;STDEV_LEN=6.807;STDEV_POS=16.462;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:13:0:5:2 -chr18 41349805 chr18-41349806-INS-97 A ATATATATAATATATATAATATATATTATATATAATATATATATAATATATATAATATATATTATATATAATATATATATAATATATATAATATATAT 4 . ID=chr18-41349806-INS-97;SVTYPE=INS;SVLEN=97;TIG_REGION=h2tg007997l:202571-202667;QUERY_STRAND=+;HOM_REF=0,17;HOM_TIG=0,17;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=297.0 GT:AD:DP:SAC:SUPP 1/1:1,5:6:0,1,3,2:5 +chr18 41349805 chr18-41349806-INS-97 A ATATATATAATATATATAATATATATTATATATAATATATATATAATATATATAATATATATTATATATAATATATATATAATATATATAATATATAT 4 . ID=chr18-41349806-INS-97;SVTYPE=INS;SVLEN=97;TIG_REGION=h2tg007997l:202571-202667;QUERY_STRAND=+;HOM_REF=0,17;HOM_TIG=0,17;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=297.0 GT:AD:DP:SAC:SUPP 0/1:1,5:6:0,1,3,2:5 chr18 41492755 pbsv.INS.DUP.646 A AAATATTAGTAGTATTTTACTTTAGT 0 PASS SVTYPE=INS;SVLEN=25;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 chr18 41563438 chr18-41563439-DEL-79;pbsv.DEL.647 GAACATCATTAGGAGTCAGCAAGAGAAGACACGGAATAAGGGGATTTCTGATGGAAGAAAGAAAAAAAAATGAAAGAAGA G 4 PASS ID=chr18-41563439-DEL-79;SVTYPE=DEL;SVLEN=-79;TIG_REGION=h1tg011062l:38301-38301,h2tg007997l:416352-416352;QUERY_STRAND=-,+;HOM_REF=0,2;HOM_TIG=0,2;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=298.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:10:27:7 chr18 41577488 pbsv.INS.648 T TATATATATATTTATATATATATATATATA 2 PASS SVTYPE=INS;SVLEN=29;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,5,5:4 @@ -926,25 +926,25 @@ chr18 41802797 pbsv.DEL.651 CTGTGTGTGTGTGTGTGTGTGTG C 2 PASS SVTYPE=DEL;SVLEN=-2 chr18 41831491 pbsv.DEL.652 TTATATATATATATATATATATATATATATATATATATATATATA T 2 PASS SVTYPE=DEL;SVLEN=-44;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,8:12:2,2,3,5:4 chr18 41843573 pbsv.DEL.653 TAAAAATATTATTTTTAAATGTCATTT T 2 PASS SVTYPE=DEL;SVLEN=-26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,13:13:0,0,7,6:4 chr18 41952015 chr18-41952016-INS-93 A AGGGAAGGGAGGGGAAGGGAAGGGAAGGGAAGGGAAGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGGAAGGAGGGAAAGGG 4 . ID=chr18-41952016-INS-93;SVTYPE=INS;SVLEN=93;TIG_REGION=h1tg005710l:56046-56138,h2tg016253l:42907-42999;QUERY_STRAND=+,+;HOM_REF=0,38;HOM_TIG=0,38;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=299.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,11:11:.:11:30:0,0,4,7:7 -chr18 42009616 chr18-42009617-DEL-60;pbsv.DEL.655 CTACATTATGTAATGTACATTATGTAATGCTTACATTATGTAATGTACATTATGTAATGCT C 4 PASS ID=chr18-42009617-DEL-60;SVTYPE=DEL;SVLEN=-60;TIG_REGION=h1tg001255l:16790-16790;QUERY_STRAND=+;HOM_REF=0,95;HOM_TIG=0,95;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=300.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:5:6:7 +chr18 42009616 chr18-42009617-DEL-60;pbsv.DEL.655 CTACATTATGTAATGTACATTATGTAATGCTTACATTATGTAATGTACATTATGTAATGCT C 4 PASS ID=chr18-42009617-DEL-60;SVTYPE=DEL;SVLEN=-60;TIG_REGION=h1tg001255l:16790-16790;QUERY_STRAND=+;HOM_REF=0,95;HOM_TIG=0,95;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=300.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:5:6:7 chr18 42054126 pbsv.DEL.656 GTATATATATATATATATATATATATATATATATATATATATA G 2 PASS SVTYPE=DEL;SVLEN=-42;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:2,1,2,0:4 chr18 42076087 pbsv.DEL.657 TGCATATATATATATATATATATATATATATATATGC T 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,5:6:1,0,4,1:4 chr18 42076334 pbsv.INS.658 T TATATATATATTATATATGCACATAT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=25;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:4,1,1,0:4 chr18 42274026 chr18-42274027-INS-56;pbsv.INS.659 A ATATATATATATATATATATATATATATATATATATATATATATATATATGTATATG 4 PASS ID=chr18-42274027-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h2tg006921l:68676-68731;QUERY_STRAND=+;HOM_REF=0,5;HOM_TIG=0,5;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=301.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:6:13:7 chr18 42277942 pbsv.INS.660 T TATATATATATATACATAATAC 2 PASS SVTYPE=INS;SVLEN=21;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 -chr18 42339844 chr18-42339845-INS-62 T TTGGACAGTGATTTTGAGGCTAAGTTAGGATTCTTTTCTTTTTTCTTTTTTTAAGGCAGTGTC 4 . ID=chr18-42339845-INS-62;SVTYPE=INS;SVLEN=62;TIG_REGION=h1tg008105l:195395-195456;QUERY_STRAND=-;HOM_REF=0,63;HOM_TIG=0,63;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=302.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,3:7:4:3:18:1,3,1,2:7 -chr18 42374195 chr18-42374196-INS-294;pbsv.INS.662 G GCTTGTTAGATTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATT 4 PASS ID=chr18-42374196-INS-294;SVTYPE=INS;SVLEN=294;TIG_REGION=h1tg008105l:160741-161034;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=303.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:3:18:7 +chr18 42339844 chr18-42339845-INS-62 T TTGGACAGTGATTTTGAGGCTAAGTTAGGATTCTTTTCTTTTTTCTTTTTTTAAGGCAGTGTC 4 . ID=chr18-42339845-INS-62;SVTYPE=INS;SVLEN=62;TIG_REGION=h1tg008105l:195395-195456;QUERY_STRAND=-;HOM_REF=0,63;HOM_TIG=0,63;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=302.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,3:7:4:3:18:1,3,1,2:7 +chr18 42374195 chr18-42374196-INS-294;pbsv.INS.662 G GCTTGTTAGATTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATT 4 PASS ID=chr18-42374196-INS-294;SVTYPE=INS;SVLEN=294;TIG_REGION=h1tg008105l:160741-161034;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=303.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:3:18:7 chr18 42608374 pbsv.DEL.663 CTCTTTCTTTCTTTCTCTTTCTTTCTTTCTT C 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,7:8:1,0,4,3:4 chr18 42699237 pbsv.DEL.664 TAGAGAGAGAGAGAGAGAGAGAGAG T 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,3,0:4 chr18 42905977 pbsv.DEL.665 AATATATATATATATGTATATATATATATAC A 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,11:12:1,0,7,4:4 -chr18 43105457 chr18-43105458-INS-136;pbsv.INS.666 G GGAGGAAGGGAGGAAGGGAGGAAGAGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGAGAGGAAGGGAGGAAGGGAGGAAGAGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGA 4 PASS ID=chr18-43105458-INS-136;SVTYPE=INS;SVLEN=136;TIG_REGION=h1tg002098l:49946-50081,h2tg001937l:49946-50081;QUERY_STRAND=-,-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=304.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:3:21:7 +chr18 43105457 chr18-43105458-INS-136;pbsv.INS.666 G GGAGGAAGGGAGGAAGGGAGGAAGAGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGAGAGGAAGGGAGGAAGGGAGGAAGAGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGGGAGGAAGA 4 PASS ID=chr18-43105458-INS-136;SVTYPE=INS;SVLEN=136;TIG_REGION=h1tg002098l:49946-50081,h2tg001937l:49946-50081;QUERY_STRAND=-,-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=304.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:3:3:21:7 chr18 43105488 pbsv.INS.667 G GAGAGGAAGGGAGGAAGAGAGGAAGGGAGGAA 2 PASS SVTYPE=INS;SVLEN=31;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:1,2,2,1:4 chr18 43232219 pbsv.DEL.668 GTATATATATATATATATATATATA G 2 PASS SVTYPE=DEL;SVLEN=-24;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,3:5:2,0,1,2:4 chr18 43397982 pbsv.DEL.669 TACATATATATATACACATATATATACATATATATATACATAT T 2 PASS SVTYPE=DEL;SVLEN=-42;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,3:11:4,4,2,1:4 chr18 43451580 chr18-43451581-DEL-985;pbsv.DEL.670 TAAAAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAGAAATGCTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGTCTGGATTAAGAAAATGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGACATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCGGCACAATGTGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAATAAAAAAAAAAAAAAAATAAAAAATAAAAAAAAAAAATA T 4 PASS ID=chr18-43451581-DEL-985;SVTYPE=DEL;SVLEN=-985;TIG_REGION=h2tg008402l:26828-26828;QUERY_STRAND=+;HOM_REF=0,4;HOM_TIG=0,4;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=305.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:2:14:7 chr18 43459741 pbsv.INS.671 A AATATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:1,2,2,1:4 chr18 43601745 pbsv.INS.672 G GAAGGAAGGAAGGAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGG 2 PASS SVTYPE=INS;SVLEN=44;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 -chr18 43699350 chr18-43699351-DEL-86;pbsv.DEL.673 ATATATATATGTATATATATATGTGTGTATATATATATATGTGTATATATATGTGTGTATATATATATATGTATATATATATATGTG A 4 PASS ID=chr18-43699351-DEL-86;SVTYPE=DEL;SVLEN=-86;TIG_REGION=h2tg008402l:273624-273624;QUERY_STRAND=+;HOM_REF=0,9;HOM_TIG=0,9;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=306.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 +chr18 43699350 chr18-43699351-DEL-86;pbsv.DEL.673 ATATATATATGTATATATATATGTGTGTATATATATATATGTGTATATATATGTGTGTATATATATATATGTATATATATATATGTG A 4 PASS ID=chr18-43699351-DEL-86;SVTYPE=DEL;SVLEN=-86;TIG_REGION=h2tg008402l:273624-273624;QUERY_STRAND=+;HOM_REF=0,9;HOM_TIG=0,9;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=306.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:6:16:7 chr18 43801606 chr18-43801607-DEL-50;pbsv.DEL.674 AAAAAAAAAAGAAAGAAAGAAATAGGAAAGGTTAGTTAATCTTTCAGGAAG A 4 PASS ID=chr18-43801607-DEL-50;SVTYPE=DEL;SVLEN=-50;TIG_REGION=h1tg021919l:35617-35617,h2tg020905l:35617-35617;QUERY_STRAND=-,-;HOM_REF=0,0;HOM_TIG=0,0;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=307.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 chr18 43821506 pbsv.DEL.675 CATATATATATATATATATAT C 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,2,7:4 chr18 43873462 chr18-43873463-DEL-328;pbsv.DEL.676 TAAAAAATGATGGATCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCATAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA T 4 PASS ID=chr18-43873463-DEL-328;SVTYPE=DEL;SVLEN=-328;TIG_REGION=h1tg001651l:18741-18741,h2tg007890l:19490-19490;QUERY_STRAND=-,+;HOM_REF=0,23;HOM_TIG=0,23;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=308.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:11:30:7 @@ -955,12 +955,12 @@ chr18 44306680 chr18-44306681-DEL-135;pbsv.DEL.680 AGCTGGGATTACAGGCATGTGCCACCATG chr18 44360390 pbsv.DEL.681 ATAATATAAATAAATATATATAAAAAATATAATATTTAATAAATTATTTATTATATAATAGATAAT A 2 PASS SVTYPE=DEL;SVLEN=-65;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:2,5,0,1:4 chr18 44360729 pbsv.DEL.682 ATATTATTTATATATGATATAATAAATATATATTATATAT A 2 PASS SVTYPE=DEL;SVLEN=-39;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:1,4,1,2:4 chr18 44362010 chr18-44362011-INS-427 A ATATATAATATAAATAAATATAAATATAATATTTATATTTATATATATATAAATAAATATAAATATAATATTTATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATAATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAATATAAATATATTTATAATATATAAATAAATATAAATATATTATATAATATATAAATAAATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATTTATATAATATATAAATAAATATAAATATATTTATATT 4 . ID=chr18-44362011-INS-427;SVTYPE=INS;SVLEN=427;TIG_REGION=h1tg023965l:94426-94852,h2tg010469l:64937-65400;QUERY_STRAND=-,-;HOM_REF=0,11;HOM_TIG=0,11;AC=2 GT:SUPP 1/1:1 -chr18 44362011 Sniffles2.INS.DDS11 T TATATAATAATAAATAAATATAAATATAATATTTATATTTATATAATATATAAATAAAATATAAATATAATATTTATATTTATATAATATATAAATAAATATAAATATAATTTATAATATATAATAAATATAAAATATAATATTTATATAATATATAATAAATATAAATATATTTATATAATATTAAATAAATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATTTAGATAATATATAAATAAATATAAATATATTTTATTT 3 PASS PRECISE;SVTYPE=INS;SVLEN=455;SUPPORT=6;COVERAGE=7,6,6,6,6;STRAND=-;AF=1;STDEV_LEN=10.801;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=311.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:2,6:8:2,0,0,6:6 +chr18 44362011 Sniffles2.INS.DDS11 T TATATAATAATAAATAAATATAAATATAATATTTATATTTATATAATATATAAATAAAATATAAATATAATATTTATATTTATATAATATATAAATAAATATAAATATAATTTATAATATATAATAAATATAAAATATAATATTTATATAATATATAATAAATATAAATATATTTATATAATATTAAATAAATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATAATATATAAATAAATATAAATATATTTATATTTAGATAATATATAAATAAATATAAATATATTTTATTT 3 PASS PRECISE;SVTYPE=INS;SVLEN=455;SUPPORT=6;COVERAGE=7,6,6,6,6;STRAND=-;AF=1;STDEV_LEN=10.801;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=311.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:2,6:8:2,0,0,6:6 chr18 44396742 chr18-44396743-DEL-5366;pbsv.DEL.684 GCAACCTCCCTCTGCAGTTTGCAGCTTTTTCACACTGCTAGCTCTCACTGCCCCATCAGCAGGTGTGAAAGAAGAGTCAAGGGAAAAGAGTAGTTGCTTTCTGGCCCAAAATGATGACATAAAAGGAACTATACCAATGCCTTCACTTTATTGTTTTCACACAAACTTGACAGAGGATTCTTAAATATTGTTTTGCTTTCAGCATCAGCCTCCTAATAGGAGAAATGCCAGACTTGTTAGAAATAGAGTCTGATCCATTCTGTAGAAGAGTTAACAGTTTAGTTAAGATCCATGAAATCTGGATGCAGCCCATATGGAATTGTCACTGTTGCTTTCATTAAAGCTGGAATTACGCACATCAACATATGACTGCACCAATGTGGAATATTAGAAATCACCCTGGCATGTATCTTCCACAAGTGGCGAATCTGTCATACAGGGGCTACCTTGGTTCTGCCACTCACATGGTTAAAATTATCTAGCTTTGAAAGTTTATTTATTTGTAAAAATATGCAAATGTGTTCCTGCTTATTAAACCCATTAGGATTATGAGAATCAATTGTGAAGAAATGGACGTATTGCATATTAAATTTTAATTCCTATGTATGATCATGTTTTCTAAGACACATTTTTCAGAATAATCTCTTTTTTAAATATTAGCGATTATAGAGTTCTTAGGGTTGAATAATTCTCAGTAAACCTGCATGTATCTCTAGAATTATGTTTGTAAATATTTTTTTCTTAAAACACTTTCTCCAGATGTAAACTTCCTTAGTAGCCTAATCCTTAATTTCATTATATTTCTCTTTATAATTACTAGAACTTATTCTTCCTGCAATTCTACTCTCCTTTAGTAGAGCACTTTAATTTACTTTATTAGAATGGCTTAATAATTGTATTGTAGATCTAAAAGATAAAATTAATTATATATTTTAATTGATAATTTTATAGATTTCACTGAAATTTGTGAAGAATTCTGAAAGGACGTTATAATTATCACTTTGTACATTTCTATTTGCAAGTCAGATACATCTGAATGAGCACTGATATCTTGGCTGTATTGTTTGAAAAATTAATCTGCAAATGAGAGTTTATCCCCCTCTTCAATTAGATTTCAAAACTAATCTATCAAAATAACTAAATAGAAAATTATTTTTGCACAAGGAAACTTCAGATTGAAATGTGTGACTAGTGCAATTAATTCTCTTTCTCATTTAATTTTGAAACATTTATGATCTGTATTTAATGTAACTTTGGTTTTTGTTCCCAGACTCCAAACAGCCCAGGAGAGTTTCATATGAGTTATAAAGTTCCACCCCCACCCCATTTCTCTAAAGTTAATAGACCCACATGTTAATACACCCTCAGGGATACATTTGCATCATTTTCCAGTCATCTGTGACTGTAAACTTTCTTTTTTAATTTTTAATTTTTGTTGGTACGTAGTAGGTGTATATGTTTATGAGGTACATGAGCTACTTTGAAACAGACATGCAATACGTAATAATCACATCATGGTAAGTGGGGAATTCATCCCTTCAAGTACTTACCCTTTGTGTTGCACACAATATAATTATATTATTCTAGTTATTTTTAAATGTATGATTAAATTATTATTGGTTATAGTTGCCCTGTTGTGCTATCAAATACGAGGTCTTATTTCTAACTTTTAAATTCAATATTATCCAGTGTTACCAGAAAGAATTAAAAGAGTATTTGAAATTATTTAAATGACCTTACTAAACCATCAATTTTGAACATATGTCTCCATGCTATTTAATCAAGGATGATGATGATGATGATGATGATATTTGCCTCCCATTAGATGCAGTAGGTGATACGAATCAACTATAGAGCTCAGTCCATGTTTTTCAAAACTTTAGTGTCCACTTTAGTGCTCAAAATATTTCATGTTATTCAGAGTGAAGTGAGTAAATAAGCCTTCAAGGTTCTTCTCATATAAGAAACTAAACTTAAGGTTGTTACATATTTACCCTTACAGACCATAATCATCCCATGACAAGGTGTAAAAAAACCCCCAGGATTTGTCCTCTTTATCTCTAACCACCTCTTTTTCTATTCTATGCCTTGACACTCTATTCCAACATATCACACTCAATAATTCCATGTGAGTGATGGAATTGTGAGTGATCAATTTCAGTTGATCAATTTCAGGGATACTCTGAAATTGATATCTCATATAACATCTGTTTGTTTGCACTCCTGGAAACACTCTTTTAAGGTATTACTGAGTTTATTAGATGTTGCAGAATAAGAAATAGTATGAAAACATCTTCTGAAGTTCAGAAAAAGAATCCCTGAGAAACAACTTCCATAATGAAATACAAAATCCAGAAACAGAGGATGTGGTTAGTCTATTTTAAAAAAATGTGAGGCTGTTTGCATAACTGAAAACCTTCATCAATTCTGCTTGTAAGCAGGTGATTTCCTATGTAGTATTACCGAAAAGGCTTCAGGAGGTGACATGTAAAAACACAGCCTTCCCAAGTTTCATGAAGTTAAAATTTTATTGTGACAATGTTATTATTTAAGTATTTAAATACAAAAGCCCCTAGGGGGAAAAGTAACACTTTATGTAGTTATCTGTGACCATCATAAAGTGATCTTATGATACCTTATAATTTTGAAATTATATAAATATATTATTATACCTTAGTTAAAAGTATCTGAGAAGTGTTGATTATAGAAATAGAATCTGGGGCTTCTTGGTTCCCAAGACACATTTAATGAACAGATACAGAAATAACGTAAAAACAGAGGACTCAAACCAAAACAGTTTTATCAGCTTCACATTTTACCTGAAGCTGGCACTTCCCCAATACACTGAAGAATTCTTGTACCAGAAATCTCAGAAATAAGTCCATAGTGTATTAGAAAAAGAAAAAGAGAAATTTAGCTTCCAAACTTTGATGTTGATTTCAGAGATCTGTAAAGACTACTGTAAATTTAAACACAAGATCGTTTTTTAAAAAAATATCAGGGAAAACTAGTTTAGATAATTACTATAGTCAGTTTTGGAGCCGGGAAAATTGATGCCAAATAACACAAGCACAAACACAAACCAGAAATTTAAAAATGCCTCAAGCTTATTCCCTTAGAATACAATACTGCTCCTCATCCCTCATCACCAGTGTTGTTTCTGACCTCAGTTCAATTTAGCAGTGAGGGTGATTCTTCTGATCTCTGAAGAATTACCCTGAACTCCACCAGACCTCACTGGCATCCCTTAAACCAGCTTTATTTCCACTAGCTCATTAGACATCTATCAACTGTGAACTTCAGTTAGTCATTGGTTCTTCAGAGATGGAATTCCAGCCTCTCCTTTATCCCTGCCTTATCCCTGACCTACCAATCAAGAATAGGCAATTAAATGACATTTACACCCCTTTTTTTTTTTCTGAGAGGGAGTTTCACTCTTGTTGCCTAGGCTAGAGTGTGATGGTGCAATCTTGGCTCACTGCAACCTCTGCCTGCTGGGTTCAACGGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTATAGGCATGAGCTACCAAGCCGGCTAATTTTTTATTTTTAGTAAAGATGGGGTTTCTCCATGTTGCTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCAACCCACCTGAGCCTCCTAAAGTGCTGAGATTACAGGTGTGAGCCACCGCAACTGGCCCATTTACACCCTCTTGTAAAAATAAAAAGAATTTTCAGTATAATGAATTTTCTCTCAGTATTCATTATATTTATCGACTGAAAGATAGTAATGGGGTCATTTATTAGGCATTGCATAGTGTCTACTGCTGTAATCTGCATAAGTGACTATTGCAGAATTTTCTGCAGCAATTTTTTAAAGCCTAAACAAATAAAATGAAGAGAAATGCTCAGAGCAGGTGGGTGTTTAATAGTGACTTATTCCTCTGGTGATACAGATTCTATGGGTGCCTAAATGGACACAGTGGTTTCATCCACAAGTGAGATTATTATGAAACTGCTATCATTCTGTCATGAATAATTGATCCTCTCACTGTTCAGGGGGGAAAAACAACAGATGTGATAAACAATGCAACAAATGTGACAAGGAGCTTAAAGTTTATTATTTTACTGCCTGTTATTTCAACATTTGTGAAGATGCCATAGGCAAAATCACCCAATCCCTGCATGAATGTGTAAACTGCATGACACACAAAAGATTATAATTAAGTAATTTAACCCTAACTATCCAACGACCCTTCTGGGTTTTGTGGAAAAGCCCATTTCTAAGAGAACGCACAGAGCAGTGATGACTCTTTCTAGAACTGTGTAGTTAACAGAGTTTCTTTTTAGTTCTTCTTCCCTTTCATATCAATTGTCTTCTCACAGTTGACATCCTGTGTGCTCCAAGAGTCCAGACACCTGTGGAACCCATTGATCAGTCCAACTCAAGACCCTAATTACAAGGGTTCTACCCAGACATTCTCCTCAAGCTAAGCAGTATACTCAACACTTACCCGTCTTTCTTTCTACCAATCAAAGTCTTATTCTACTTCCTTGCCCTACTGTGCCAGCTTTTAGGAGGAAAGTAATCTGATTAAAATAAACTATATTAAATCCTATAATGAGAGCTCATAACTTTCTACTGATCTAGCTAATTGAAATCAGTATATTTTTAGAAAATAAACTTGAAATATGACCAAGATTTTGACAACTTCTTATATAGTCCACTTAACCTGCCAATTTCTGATGTCTTTTGAAAATCATAGCATACATCAGAAAAAATAGGATTCATGACCATTGAAGTTCTAGGTAAGAATCTTTAAAGATATATAAGCCTAAATAGTTTGTCATTATTTCTATAAATACAGATGGATAAAGAAATAAATTATGAAAGAAGATAATACAATATTAAAAGCTGTATTTTCTAGAGCTCCTGGAAAGATGGAATTTTTCTTAAAAGAAAGATTCAGGGAGTAATGAAAAGAAGTCTTCCCAAAGTTTTGAATATGTAATTCAACAGGAAACAGAAAAATTTTTTGTAAATAACATTCTAAAAATAGGTGTTAAATAAAAAGTATCTATAGCAGAAAGAAGAAAAATAAAGGGGATTTGGTTACAAGAGGAGGAAAAAGAAAAGAAAGAAAGGAGAATTCTCAGTAGATGTCTGATAAGGCATGACCCACTTAAATAGAACAAATCCACTCATAAAATGGACTCTAGGAACATTCTAAATCCCAGTTATGAGAAGTAGGTCCATTTTCTAGAATCACATGATACAATTTTCATAGTATTTAATTGTTAACCAATATTTATGTGGTATCTACAACATGTGAAGCATTCTTTTTGATACTAAATCTAGAAAAAAC G 4 PASS ID=chr18-44396743-DEL-5366;SVTYPE=DEL;SVLEN=-5366;TIG_REGION=h2tg010469l:30193-30193;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=312.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:3:18:7 chr18 44498957 pbsv.INS.DUP.685 T TTTGTTTTTTTTTTTTTTTT 0 PASS SVTYPE=INS;SVLEN=19;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,6,1:4 chr18 44544057 pbsv.INS.686 T TATTATAATATATATATTATAATATATAT 2 PASS SVTYPE=INS;SVLEN=28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:1,2,3,2:4 chr18 44544268 pbsv.DEL.687 ATATATTATATATAATAATGTTATATATAA A 2 PASS SVTYPE=DEL;SVLEN=-29;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:3,2,1,2:4 -chr18 44544800 chr18-44544801-DEL-132 TTATATAAAATATATAATATATTATATATAATATATAATATATATTATATATTATATATAAATATATATTTATATATAATAAATATATTATATATTATATATTATATATATAAAATATATATTATATAATATA T 4 . ID=chr18-44544801-DEL-132;SVTYPE=DEL;SVLEN=-132;TIG_REGION=h1tg004710l:69547-69547,h2tg004526l:69547-69547;QUERY_STRAND=-,-;HOM_REF=0,1;HOM_TIG=0,1;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=313.0 GT:DR:DV:GQ:SUPP 0/1:3:5:16:3 +chr18 44544800 chr18-44544801-DEL-132 TTATATAAAATATATAATATATTATATATAATATATAATATATATTATATATTATATATAAATATATATTTATATATAATAAATATATTATATATTATATATTATATATATAAAATATATATTATATAATATA T 4 . ID=chr18-44544801-DEL-132;SVTYPE=DEL;SVLEN=-132;TIG_REGION=h1tg004710l:69547-69547,h2tg004526l:69547-69547;QUERY_STRAND=-,-;HOM_REF=0,1;HOM_TIG=0,1;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=313.0 GT:DR:DV:GQ:SUPP 1/1:3:5:16:3 chr18 44544832 Sniffles2.INS.DES11 A ATAATATATAATATATTATATATAATATATAATATATAATATATTATATATAATATATTATATATAATATATTATATATAATATATTATATATAATATATTATATATA 3 PASS PRECISE;SVTYPE=INS;SVLEN=108;SUPPORT=3;COVERAGE=8,8,8,8,8;STRAND=+-;AF=0.375;STDEV_LEN=3.606;STDEV_POS=14.742;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=313.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:5,3:8:3,2,1,2:6 chr18 44679937 pbsv.INS.689 G GATATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,4,5:4 chr18 44703348 pbsv.DEL.690 GTTTTTTTTTTTTTTTTTTTTTT G 2 PASS SVTYPE=DEL;SVLEN=-22;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,4:11:6,1,1,3:4 @@ -970,7 +970,7 @@ chr18 45120715 pbsv.DEL.693 CTTTTTTTTTTTTTTTTTTTTTTTTTT C 2 PASS SVTYPE=DEL;SVLE chr18 45123362 pbsv.DEL.694 GGTGTGTGTGTGTGTGTGTGTGTGTGTGT G 2 PASS SVTYPE=DEL;SVLEN=-28;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,4:11:2,5,1,3:4 chr18 45236105 chr18-45236106-DEL-90;pbsv.DEL.695 ATGTGTATATATACATATATGTGTGTATATATGTATATATACATATATGTGTGTATATATGTGTATATATACATATATGTGTGTATATATG A 4 PASS ID=chr18-45236106-DEL-90;SVTYPE=DEL;SVLEN=-90;TIG_REGION=h2tg017128l:33770-33770;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 0/1:2,4:6:1,1,1,3:5 chr18 45236210 Sniffles2.DEL.308S11 TATGTGTGTATATATGTGTATATATACATATATGTGTGTATATATGTGTATATATACATGT T 0 PASS IMPRECISE;SVTYPE=DEL;SVLEN=-60;SUPPORT=4;COVERAGE=6,6,6,6,6;STRAND=+-;AF=0.667;STDEV_LEN=0;STDEV_POS=30.406;AC=1 GT:GQ:DR:DV:SUPP 0/1:8:2:4:2 -chr18 45236293 chr18-45236294-DEL-198 ACATGTATGTGTGTATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATG A 4 . ID=chr18-45236294-DEL-198;SVTYPE=DEL;SVLEN=-198;TIG_REGION=h1tg004391l:116340-116340;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=314.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,2:6:4:2:8:1,3,1,1:7 +chr18 45236293 chr18-45236294-DEL-198 ACATGTATGTGTGTATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATGTGTATATATACATGTATGTGTGTATATATG A 4 . ID=chr18-45236294-DEL-198;SVTYPE=DEL;SVLEN=-198;TIG_REGION=h1tg004391l:116340-116340;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=314.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,2:6:4:2:8:1,3,1,1:7 chr18 45504088 pbsv.INS.697 T TACCGTGTTCTCATGATGCCTTCCC 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=24;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:1,2,0,1:4 chr18 45539176 pbsv.INS.DUP.698 C CAGGGATTCAGGTGGGAA 0 PASS SVTYPE=INS;SVLEN=17;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 45645619 chr18-45645620-INS-50;pbsv.INS.699 A ATATATACATATATATATATATATATATATACATATATATATATATATATT 4 PASS ID=chr18-45645620-INS-50;SVTYPE=INS;SVLEN=50;TIG_REGION=h1tg012568l:84772-84821,h2tg002487l:94399-94448;QUERY_STRAND=-,+;HOM_REF=0,4;HOM_TIG=0,4;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=315.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 @@ -1015,15 +1015,15 @@ chr18 47492997 pbsv.INS.738 T TGGCCATACAACCAGACAAAGGTCCATGG 2 PASS SVTYPE=INS;SV chr18 47540042 pbsv.INS.739 T TCCCCCCCCCCCCCCCCCCCCCCCCCCCC 2 PASS SVTYPE=INS;SVLEN=28;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:3,1,1,0:4 chr18 47559587 pbsv.INS.DUP.740 C CCTTCCCCTTCCTCTTCCCCTTC 0 PASS SVTYPE=INS;SVLEN=22;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,5:9:1,3,1,4:4 chr18 47573523 chr18-47573524-DEL-312;pbsv.DEL.741 TAAAAAGTAGCTGCAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCGCGTGCCTGTAGTCCCAGCTACACAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGTCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAA T 4 PASS ID=chr18-47573524-DEL-312;SVTYPE=DEL;SVLEN=-312;TIG_REGION=h2tg015654l:36504-36504;QUERY_STRAND=+;HOM_REF=0,14;HOM_TIG=0,14;SVANN=ALU;AC=2 GT:AD:DP:SAC:SUPP 0/1:4,1:5:2,2,0,1:5 -chr18 47600542 chr18-47600543-INS-698 A AACCACCATCACCACCACCCCATTACTATCACCAAACCACTACCACCACCACCACAATCACCACTATCATCACCACCACCACTACCATCATCACCACCACTACAACCACCACCACCACCATCACCACCACCACCCCCTCAGCACCACCCTATCACCAACACCATTACCACCACCACCATCACAACCACCTTCCCACCACTACAACCACCACCACAACCACCACCACCACTATTACAACAATTACCATCACCATCACCACCACCACCACCCCCTCGCCACCACCATCACCGTCACTACTGCCACCACCACCACCAGCACCGCCACCCTCACCACCACCACCACTGTCACCACCACTACCATCACAACTACTCCACCACCACCACTACCATCACCACCACAATTACCACCACCACCATCACCATCAGCACCACCCTCATCATCACCACCACCATTACCACCACCATCACCATTACCACCGTCACCACAAACACCCTCACTACCACCATCACCATCACCACCACTATCACCATCACCACCACAAACACCCTCACCACCACCATCACCATCACCACCACCACCCTCACCACTACCATCACCACTGCCACCCTCACCATCACCACCACCACCACCATCACCATCACCACTGCCATGACCACCACCATCATCATCACTGTCACCACCATCACCACCACCCTCACC 4 . ID=chr18-47600543-INS-698;SVTYPE=INS;SVLEN=698;TIG_REGION=h1tg003681l:339363-340060;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=329.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,2:2:.:2:5:0,0,0,2:7 +chr18 47600542 chr18-47600543-INS-698 A AACCACCATCACCACCACCCCATTACTATCACCAAACCACTACCACCACCACCACAATCACCACTATCATCACCACCACCACTACCATCATCACCACCACTACAACCACCACCACCACCATCACCACCACCACCCCCTCAGCACCACCCTATCACCAACACCATTACCACCACCACCATCACAACCACCTTCCCACCACTACAACCACCACCACAACCACCACCACCACTATTACAACAATTACCATCACCATCACCACCACCACCACCCCCTCGCCACCACCATCACCGTCACTACTGCCACCACCACCACCAGCACCGCCACCCTCACCACCACCACCACTGTCACCACCACTACCATCACAACTACTCCACCACCACCACTACCATCACCACCACAATTACCACCACCACCATCACCATCAGCACCACCCTCATCATCACCACCACCATTACCACCACCATCACCATTACCACCGTCACCACAAACACCCTCACTACCACCATCACCATCACCACCACTATCACCATCACCACCACAAACACCCTCACCACCACCATCACCATCACCACCACCACCCTCACCACTACCATCACCACTGCCACCCTCACCATCACCACCACCACCACCATCACCATCACCACTGCCATGACCACCACCATCATCATCACTGTCACCACCATCACCACCACCCTCACC 4 . ID=chr18-47600543-INS-698;SVTYPE=INS;SVLEN=698;TIG_REGION=h1tg003681l:339363-340060;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=329.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,2:2:.:2:5:0,0,0,2:7 chr18 47684927 chr18-47684928-INS-58 T TTATATATAATATATATTTATATATATTATATATATATTTTATATATAATATATATTTA 4 . ID=chr18-47684928-INS-58;SVTYPE=INS;SVLEN=58;TIG_REGION=h1tg003681l:254900-254957;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,7;AC=1 GT:SUPP 1/0:1 -chr18 47684928 Sniffles2.INS.E4S11 A TATATATAATATATATTTTATATATAATATATATTTATATATATTATATATATATTTTATATATAATATTATTTA 3 PASS PRECISE;SVTYPE=INS;SVLEN=75;SUPPORT=3;COVERAGE=4,4,4,4,4;STRAND=-;AF=0.75;STDEV_LEN=2;STDEV_POS=16.462;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=330.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:0,4:4:0,0,1,3:6 +chr18 47684928 Sniffles2.INS.E4S11 A TATATATAATATATATTTTATATATAATATATATTTATATATATTATATATATATTTTATATATAATATTATTTA 3 PASS PRECISE;SVTYPE=INS;SVLEN=75;SUPPORT=3;COVERAGE=4,4,4,4,4;STRAND=-;AF=0.75;STDEV_LEN=2;STDEV_POS=16.462;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=330.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:0,4:4:0,0,1,3:6 chr18 47697044 pbsv.INS.744 C CTCTCCTCTGCGCCCTGCCCACCG 2 PASS SVTYPE=INS;SVLEN=23;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 47850769 pbsv.DEL.745 CATTATGTATAATATATATTATATATTATATAT C 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:1,1,2,0:4 chr18 47982743 pbsv.DEL.746 GGAGGGGGAGAGAGGGGGAGAGAGGGGGAGAGAGAGA G 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,3:4:0,1,1,2:4 chr18 48012811 pbsv.INS.747 C CCCTCCCTCCCTCCCTCCCTT 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,3,0:4 chr18 48020849 pbsv.INS.749 C CCTCCTCTCCTCCCTTCTAACCTGACTCCCCTCCTCCCCACTCCCCCCTTCTAATCTGACTCCCCTCCTCCCCG 2 PASS SVTYPE=INS;SVLEN=73;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,3:4:1,0,3,0:4 -chr18 48020850 Sniffles2.INS.E5S11 C TTCCTCTCCTCCCTTCTAACCCGACTCCCCTCCCTCCTCTCCTCCCTTCTAACCTGACTCCCCTCCTCCCACTCCCCCCTTCTAATCTGACTCCCCTCCTCCCCG 3 PASS PRECISE;SVTYPE=INS;SVLEN=105;SUPPORT=4;COVERAGE=4,4,4,4,4;STRAND=+;AF=1;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=331.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:3,1:4:3,0,1,0:6 +chr18 48020850 Sniffles2.INS.E5S11 C TTCCTCTCCTCCCTTCTAACCCGACTCCCCTCCCTCCTCTCCTCCCTTCTAACCTGACTCCCCTCCTCCCACTCCCCCCTTCTAATCTGACTCCCCTCCTCCCCG 3 PASS PRECISE;SVTYPE=INS;SVLEN=105;SUPPORT=4;COVERAGE=4,4,4,4,4;STRAND=+;AF=1;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=331.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:3,1:4:3,0,1,0:6 chr18 48021002 pbsv.INS.750 T TCCTCCCTTCTAACCTGACTCCCCTCCTCCCCTCGCTCCTCT 2 PASS SVTYPE=INS;SVLEN=41;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:3,0,1,0:4 chr18 48100894 pbsv.DEL.751 AGGGGCGGTAGGGGACTGGTGGG A 2 PASS SVTYPE=DEL;SVLEN=-22;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,5:7:2,0,1,4:4 chr18 48149177 pbsv.DEL.752 TGTGTGTGTGCGCACGTGTGTGTGCACGC T 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:3,2,1,2:4 @@ -1034,11 +1034,11 @@ chr18 48180112 pbsv.INS.756 T TTTCCTTCCTTCCTTCCTTCCTTCC 2 PASS SVTYPE=INS;SVLEN= chr18 48368806 pbsv.INS.757 A AAAGAAAAGAATTATCCACCCAG 2 PASS SVTYPE=INS;SVLEN=22;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,6,2:4 chr18 48469772 chr18-48469773-DEL-317;pbsv.DEL.758 TAGAAAATAGGTATCATGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA T 4 PASS ID=chr18-48469773-DEL-317;SVTYPE=DEL;SVLEN=-317;TIG_REGION=h1tg002775l:72139-72139,h2tg002615l:72113-72113;QUERY_STRAND=-,-;HOM_REF=0,19;HOM_TIG=0,19;SVANN=ALU;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=333.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:11:30:7 chr18 48511186 chr18-48511187-INS-352 A ACACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGAT 4 . ID=chr18-48511187-INS-352;SVTYPE=INS;SVLEN=352;TIG_REGION=h1tg002775l:30695-31046;QUERY_STRAND=-;HOM_REF=0,23;HOM_TIG=0,183;AC=1 GT:SUPP 1/0:1 -chr18 48511254 chr18-48511255-INS-448 A AGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACT 4 . ID=chr18-48511255-INS-448;SVTYPE=INS;SVLEN=448;TIG_REGION=h2tg002615l:30532-30979;QUERY_STRAND=-;HOM_REF=0,19;HOM_TIG=0,83;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=334.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,3:3:.:3:8:0,0,3,0:7 +chr18 48511254 chr18-48511255-INS-448 A AGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACAGAATATGATACATATATCACATATAGATCACT 4 . ID=chr18-48511255-INS-448;SVTYPE=INS;SVLEN=448;TIG_REGION=h2tg002615l:30532-30979;QUERY_STRAND=-;HOM_REF=0,19;HOM_TIG=0,83;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=334.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,3:3:.:3:8:0,0,3,0:7 chr18 48513847 chr18-48513848-DEL-59 TTAATATGCCATACTATACTTGCCTGGTTGTCTGTCTTTGCTAAAAGAATGTGTGCTCCA T 4 . ID=chr18-48513848-DEL-59;SVTYPE=DEL;SVLEN=-59;TIG_REGION=h2tg002615l:27932-27932;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 0/1:1 chr18 48516181 chr18-48516182-INS-60 G GACTGTATTTGGAGAAAGCACCTCTAAAGAGGTAACTTGGTTAAAATCAAGTCCTGTGGGA 4 . ID=chr18-48516182-INS-60;SVTYPE=INS;SVLEN=60;TIG_REGION=h1tg002775l:25596-25655,h2tg002615l:25596-25655;QUERY_STRAND=-,-;HOM_REF=0,61;HOM_TIG=0,61;AC=2 GT:SUPP 1/1:1 chr18 48568633 pbsv.INS.760 T TAAAAAAAAAAAAAAAAAAAAAAA 2 PASS SVTYPE=INS;SVLEN=23;AC=1 GT:AD:DP:SAC:SUPP 0/1:9,9:18:5,4,3,6:4 -chr18 48632980 chr18-48632981-DEL-78;pbsv.DEL.761 TAGGGTTGCATACGGATGTGCACGAAGCCTCAGGGTCTGATTTGTGCGTGCCCATCAGGAGGCCCCATCCTGCCAAGGC T 4 PASS ID=chr18-48632981-DEL-78;SVTYPE=DEL;SVLEN=-78;TIG_REGION=h1tg022842l:59840-59840,h2tg021684l:59840-59840;QUERY_STRAND=-,-;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=337.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:6:3:7 +chr18 48632980 chr18-48632981-DEL-78;pbsv.DEL.761 TAGGGTTGCATACGGATGTGCACGAAGCCTCAGGGTCTGATTTGTGCGTGCCCATCAGGAGGCCCCATCCTGCCAAGGC T 4 PASS ID=chr18-48632981-DEL-78;SVTYPE=DEL;SVLEN=-78;TIG_REGION=h1tg022842l:59840-59840,h2tg021684l:59840-59840;QUERY_STRAND=-,-;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=337.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:2:6:3:7 chr18 48664713 pbsv.DEL.762 CCTGGAATCCCTCCATTTCCCT C 2 PASS SVTYPE=DEL;SVLEN=-21;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,7:10:2,1,4,3:4 chr18 48671983 chr18-48671984-INS-4209 A AAATATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATCTTCTCTTCCTCATGCTTTCTTTTCTGCAGCATATAGAACCTATTCCCAATAGCTGTTTTAAGTCCTTCTCTACTAATTCTGTCATCCATATAATCTCTGAGTCTATTTCTATTCATTGATTTTTCTCTTGGTTATGGGGCATACCTTTCTTTACATGCTTGGTAATTTGATGTTAAATGTCATATGTTAGAACCTTTACATTATTGGGTGCTATTTTTTTTGTATCACTTTAAATATTTTGGGTTTTGTTCTGGATCACAGTTAAGTTACATAAAAACAGTTTGATCCTTTCAAGACTTGCTTTTAGGCTTTGTTAGGGTGGGAAGACTTTAGTGTAGGGCAAATTTTGCTCCACTGCTGAATCAATACCCTTCTGAGATTGCCACCCAATGCTCTGTGTATTAGGAGGTGTTCCCCCCTGGCTGGAGAAACACAAACTATTTTCAGCCGTATGTGATCTCAGTGGATTGTTCTATCTATTCCTTGCCTCAGAAGTTTCCTTACACATGGACAAATTAATACTCAGCCAAAGACTTGAGAGGCTAAGATTTCTGGATTTATCTCTGTATGTTGGTCTCTCCTCTTTAGTACTCTGCCTTGCAAATCAAATTGTCTTGGACTCCGTGGATTTTGAACCCTGTCATCTTAGCTCATTGAGACCACTGGGCCCTGGACTGCCCTCCCTGTGTTGCAGACTGGAAACTTTCCAGGCAATGAACCAGGGCACACATAGAGGTCACCTCATTACAAAGAGAAATATGATGACTTTATCACGGAGAAACCTGGAAGGCCCCAACGTGACCAGGTGATCAAGGAAACATCATTAGTGATGGGATGGGTGGACACTATGTCCTTCCTTCCAAGAAAGCATAGCCTGAGTCTGGTTTTTGGAAATCAGTATAAGGACCACTCTCTATAACTGCTTGGACACAAAAGACAGGGAAAGACTGAGGAAGTCTTCCAGATTGTAGAAGACAGAAGAGGCAAATGACTAAATACAACTTGTGTTCCTTGCTGAAATCCTGAACCAGAAGGAAATGCTGACCTTGCTGGGACAGTTGGAGAATGTGATTAGGTCTGTGGGTGGGACAGTAGTGTTGCTTCGATGTCAGTTTCCTGACTTGGAGGCGGTGTTGGTCATGTGGGCGAGTGTGCTTGACTTTGAGAAATACACACTATGATGTTTGAGGGATATGGGCCTGGTGTCTGCAGCGTCTCCTCAAATGGTTTAGAAAGAGATTGATGATAATGGTTTGTAGACACAGAGGAAGAGAAAGGGCAAACATGCGGAGGTGTTAACAGTTGGGGAATCTGAGTGAGGAGGACGTGGATGTTCTTTGTACAGTTCTTGCACTTTCCTATAAATTTGACAGGAAAAAGAATCAATCAGTAGGGCCGAGGCTGTGATGTATAAGTCACAGGCAGAGTATCAGCTCATGAAACACCCTTTGGGCTGGATCTATATTAAATTATCACTGCTAATGGAAAGCCAGCCTTGACGCAAGAGAAAAAAGGGTAAGGTACTCGAAGTGACCACCTTATCACTCCATTTCTAAATGCCAAGAGCATTCATCATTGATAGAAGAAGTACATTTGAGAGACCCCGATCTAGGTGAGAAACCAGATGCCCCCTGCACTAGGCGGGGTGTTGACCACTCGGTACCCTTTGAGCCAGAAGCTTGGGAGTCATGGCTGGAAAAGTAACAGATCTGACGCTTTGTGTTGTTTGGTGACTGTTTCTTCACTCCTCTAGGGTACAAAATGGAGGACCTTTGGTTCCTGCTCAGACGAGAAAGGAGAGCTGGGCTGCTGGCTGGGTGGGAGGTTGGCGGTCAAGGGCTTGGTGTCTGGACCCAGGCATAGTCCCCATGGAATCCCAGCCCTGCCATTGACTAGCCCAGGAGTCTGGGGCTAGCTACTTACTCGCACTCTGCCTCAGTTTCCTCCTCTGTAAGATGAGGGAAATAACCATATCTACTTTATGGGGCGTTTGGGAAGATCAAGCACATTCCTTCACTTGAGGTGCTGAGGATGATGCCCAGCGCACAGTGGGTGCTGTGTTGGTCTCTGCTGTAATTATTCCCGGGACTCAACAATGCCAGTGAAGCCCCACCTTCTGAGGGTGGACCAGGCTATGGGGGCCCCCTCTGTTAAGAAGAGGAAGGAGGGGGTGATTTCCTGCTCCTACCCCCAGGTGAGTTGTTTCTTGGTGAAGAGGGCAATTCTGCTGGGCAAAAGCTCAGATGATGAACCTTGGCTCATAGGTTACCAAGGCCCTGGTTGATTCTTCTCCTATGCGGCCTGACAGGCAGTGGAGACAGATTGGACTAGAGGTCAGAAGAATCCACTTCTGGATGTCTGCCAGAGCCGTGTGTGTGACCTCTCCTCTGTGGGCCTCAGTTTACTCATCAGCATAATGACACAGTTGTATTAGATCAGAGGTTTGCAAACTGTGAAGCCCTCAGGATTCTCCTGGGTTGCCCCTGGGTGCTACTGGGGGGAATAGGGAGGCGGAAGCAGCCAGTTCTAGGGGCCCCCACTTGGGCCCACCCAGAACTGTTTGGCTGGTGCCTCTAAATCAGGATTCTAACGTGGTTTCATGTAAAGAAACAATCCTACTACTAAACAAACTTTGAACATCATCAGACCAAGGTCCTCTGAGGTTTCACATTCTAGAGTTTTCTTTTTTTTCTCAAGGGACGGTAAATCAGTGAGAATTCCGGGCTCTCCAGGGCCCACATGTGATGCTAAGCTCTTAGGGGCGGCTGGTAGTGGAGGCCTTCACCCACCGTCTCCACCGTCAGGCTGGAGCAGAAGGGCTTGGATATTCGTGCGCGCGCACACACACTCTTACACACCATCTATCACACACACGTACACACATACACACACCACACACATCAAACATACACATTACATATCATACACCTACACATACTCACTGCACATACCACACACCACACATGTACATACACACATATACACATCACACACATCCCTTCACACCCTACACACACATACACTACACATGCACACACATACATCACACACATATACACCCATATATACACAGCACACACACACACACACACACACACACCCCACATGTTTCCATGACACACACTTTGGATGTGCTTTGCCCTCAGTGAACTATCAGCAGATGAATCTGAGGCCACGGTGCTGGAGCTCAGCTGCATGTCGGAACTGCCTGGGAAGTGCTGAAATCTACACTGTCTGCCCACTGTGTTCCTCATTTACTGTTGTGTAACAAATTGCTCAAAACTTACTGGCTTAAAACAACAAAGAGTTATGATCCACACACTTTCTGGAGCAGCTTAGCTGGTGGTTCAGACTCAAGGTCTCTCATGAGTTTGCACTCAAGCTGATGACCAGGGATGCCGCCATCAGAAGGCACACCTGGGCTGGAAGACCCCCTCCTGTGTCTGAAGGCAGGAGGCTTCAGTTCCTCCCTGGCTGGGGGCAGGAAGCCTGGGTTCCTCCCTGGCTTCCTTGCCATGATATCTGCATAAGCTGCTTGAGTGCCCTCAGAATATGGCAGCTGTCTTTCCCCAAAGCAAGTGGTGACGGGGGGAGAGAGAAGACTCCATCGCAGAAGTCACACTCGTTTATAGCCTGATCTCAGAAGTGACAGAGCTTCACACTGCCATTTGCTGTATGTCATTTGCACAGACCAACCCTGGTACAATATGGGAAGGGCCTACACAGAGGTGTGGATCCCCAAAGGCAGGAATCATGGGGGGCTCCTGGAGGCTGGAGGACACCCTCACTGAATCACACCCAGGAATCCATTTCTTTCTTTTTTTCTTTTCTTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTTTTTTTGGAGTCTCTCTCTGGCACCCAGGCTGGAGTGCAGTGGCACAATCTTGGATCATTGCAACCTCCACCTCCCAGGTACAAGCGATTCTTGTGCCTCAGCCTCCCAAGTAGCTGGGCCACAGGTGCCCACCACCATGCCCAGCTAATTTTTCTATTTTTAGTAGAGATGGGGTTTCACCATCTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCACCTCAGCCTCCCAAAGTGTTGGGATTACAGGCATG 4 . ID=chr18-48671984-INS-4209;SVTYPE=INS;SVLEN=4209;TIG_REGION=h1tg016283l:17230-21438,h2tg021684l:16685-20918;QUERY_STRAND=-,-;HOM_REF=0,1;HOM_TIG=0,1;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=338.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,3:3:.:42:60:0,0,2,1:7 chr18 48766875 chr18-48766876-INS-54 T TCTTCTCTCCCGCTGCCTCCATTTCTCTCTGTCCTCAGCTCCTTTTCCCATTTTC 4 . ID=chr18-48766876-INS-54;SVTYPE=INS;SVLEN=54;TIG_REGION=h2tg015547l:3085-3138;QUERY_STRAND=-;HOM_REF=0,57;HOM_TIG=0,57;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=339.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,2:4:2:2:14:2,0,1,1:7 @@ -1047,24 +1047,24 @@ chr18 48870098 pbsv.DEL.766 GGTATATACGCACACACGCAGGGAGCGAGGTATGTGTGGTTGGAGAGGGTTG chr18 48891502 pbsv.DEL.767 CAATAAAATAAAATAAAATAA C 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,9:10:0,1,5,4:4 chr18 48968527 pbsv.INS.768 G GAAGGAAGGAAGGAGGAAGGAAGGGAGGAAAGAAGGAAGA 2 PASS SVTYPE=INS;SVLEN=39;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,6:8:1,1,5,1:4 chr18 48985821 pbsv.DEL.769 CTTTTTTTCTTTTTCTTTTTT C 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:1,2,2,2:4 -chr18 48997463 chr18-48997464-INS-114 T TAGAAAAGGGACGAAGCGGAGCTGCAGTGAGCCGAGATTGCGCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAA 4 . ID=chr18-48997464-INS-114;SVTYPE=INS;SVLEN=114;TIG_REGION=h1tg007004l:72336-72449;QUERY_STRAND=-;HOM_REF=0,13;HOM_TIG=0,13;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=341.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:1,3:4:1:3:1:1,0,0,3:7 +chr18 48997463 chr18-48997464-INS-114 T TAGAAAAGGGACGAAGCGGAGCTGCAGTGAGCCGAGATTGCGCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAAAAAA 4 . ID=chr18-48997464-INS-114;SVTYPE=INS;SVLEN=114;TIG_REGION=h1tg007004l:72336-72449;QUERY_STRAND=-;HOM_REF=0,13;HOM_TIG=0,13;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=341.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:1,3:4:1:3:1:1,0,0,3:7 chr18 49003285 pbsv.INS.771 A ACCTCCTCCCCTTCTTCCCTTCCC 2 PASS SVTYPE=INS;SVLEN=23;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 -chr18 49067407 chr18-49067408-INS-1021;pbsv.INS.772 A AGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGATGATGTGAGGGTTATGGAGGTTTAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTTATTGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTCATAGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAACACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGATTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGGTGATGTGAGTGTTATGGAGATTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTATTGTTATGGAGGTTCAGTAGGGGAAGGGGTAGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATATGTTGTGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTTGGGGAAGGAGTGGGGTGATGTGGGCACTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTGTTATAGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTGTTATGGAGGTTCAGTAGGGGAAGGAGTGTGGTGATGTCAGTGTTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGAT 4 PASS ID=chr18-49067408-INS-1021;SVTYPE=INS;SVLEN=1021;TIG_REGION=h1tg000950l:513337-514357;QUERY_STRAND=-;HOM_REF=0,20;HOM_TIG=0,20;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=342.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:12:33:7 +chr18 49067407 chr18-49067408-INS-1021;pbsv.INS.772 A AGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGATGATGTGAGGGTTATGGAGGTTTAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTTATTGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTCATAGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAACACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGATTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGGTGATGTGAGTGTTATGGAGATTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTATTGTTATGGAGGTTCAGTAGGGGAAGGGGTAGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTAGGGTGATGTGAGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATATGTTGTGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGGGAAGGAGTGGGGTGATGTGAGCACTATGGAGGTTCAGTTGGGGAAGGAGTGGGGTGATGTGGGCACTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGATGTGTTATAGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGTTATGGAGGTTCAGTAGGGGAAGGAGTGGGGTGATGTGAGTGTTGTTATGGAGGTTCAGTAGGGGAAGGAGTGTGGTGATGTCAGTGTTATGGAGGTTCAGTAGAGGAAGGAGTGGGGTGAT 4 PASS ID=chr18-49067408-INS-1021;SVTYPE=INS;SVLEN=1021;TIG_REGION=h1tg000950l:513337-514357;QUERY_STRAND=-;HOM_REF=0,20;HOM_TIG=0,20;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=342.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:12:33:7 chr18 49081519 pbsv.DEL.773 AGGGAGAGGGGAGAGGGGAGAGGGGAGAG A 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,6,4:4 chr18 49145108 pbsv.INS.DUP.774 C CATATATATATATATATATATA 0 PASS SVTYPE=INS;SVLEN=21;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,3,3:4 -chr18 49203112 chr18-49203113-INS-1038 C CGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCTCCGCCCAGCCAACCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGAAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCCGGAAGGAGGTGGGGGGGTCAGCCCCGCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGTCCGGCCAGCCGCTCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCG 4 . ID=chr18-49203113-INS-1038;SVTYPE=INS;SVLEN=1038;TIG_REGION=h1tg000950l:376578-377615;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=343.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,6:10:.:6:16:2,2,2,4:7 +chr18 49203112 chr18-49203113-INS-1038 C CGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCAGCCCGGCCAGCCACCCCGTCCGGGAGGGAGATGGGGGGGTCAGCCCCCCCACCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTAGGGGGGTCAGCCCTCCGCCCAGCCAACCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGAAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCCGGAAGGAGGTGGGGGGGTCAGCCCCGCGCCCGGCCAGCCGCCCTGTCCGGGAGGGAGGTGGGGGGGTCAGCCCTCCGCCCGGCCAGCCGCCCCGTCTGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGTGTCGGCCCCCCGTCCGGCCAGCCGCTCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCTGCCTGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGGTCAGCCCCCCTGCCCGGCCAGCCGCCCGGTCCGGGAGGTGAGGGGCGCCTCTGCCCGGCCGCCCCTACTGGGAAGTGAGGAGCCCCTCTGCCCGGCCAGCCGCCCCATCCGGGAGGGAGGTGGGGGGGGTCAGCCCCCCGCCTGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGGTCAGCCCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGTGAGGGGCGCCTCTGCCG 4 . ID=chr18-49203113-INS-1038;SVTYPE=INS;SVLEN=1038;TIG_REGION=h1tg000950l:376578-377615;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,3;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=343.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,6:10:.:6:16:2,2,2,4:7 chr18 49254281 pbsv.DEL.776 CATATATATATATATATATATAT C 2 PASS SVTYPE=DEL;SVLEN=-22;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 -chr18 49440824 chr18-49440825-INS-197;pbsv.INS.777 A AATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATT 4 PASS ID=chr18-49440825-INS-197;SVTYPE=INS;SVLEN=197;TIG_REGION=h1tg000950l:138690-138886;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,6;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,3,1:5 +chr18 49440824 chr18-49440825-INS-197;pbsv.INS.777 A AATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATT 4 PASS ID=chr18-49440825-INS-197;SVTYPE=INS;SVLEN=197;TIG_REGION=h1tg000950l:138690-138886;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,6;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/0:0,4:4:0,0,3,1:5 chr18 49440995 Sniffles2.INS.F0S11 A TTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATGACTATATATTATATATTTATATAATATATTTATATAAATACATTATATTTTATATATTTATATAAATACATTATATTTT 3 PASS PRECISE;SVTYPE=INS;SVLEN=184;SUPPORT=2;COVERAGE=4,4,4,4,4;STRAND=+-;AF=0.5;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:2:2:2 chr18 49516094 pbsv.INS.778 T TTTTTTATTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:4,2,1,0:4 chr18 49558432 pbsv.INS.DUP.779 T TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 0 PASS SVTYPE=INS;SVLEN=30;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,4:9:2,3,3,1:4 chr18 49577657 pbsv.DEL.780 CACCTCCCTCCCGGACGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCA C 2 PASS SVTYPE=DEL;SVLEN=-49;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:1,1,0,2:4 -chr18 49579003 Sniffles2.INS.F1S11 G GGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGA 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=66;SUPPORT=3;COVERAGE=3,3,2,2,2;STRAND=+-;AF=1;STDEV_LEN=14.742;STDEV_POS=17.039;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=345.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:2,2:4:1,1,0,2:6 +chr18 49579003 Sniffles2.INS.F1S11 G GGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGA 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=66;SUPPORT=3;COVERAGE=3,3,2,2,2;STRAND=+-;AF=1;STDEV_LEN=14.742;STDEV_POS=17.039;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=345.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:2,2:4:1,1,0,2:6 chr18 49579031 chr18-49579032-INS-60 A AGGGAGAGGGAGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAG 4 . ID=chr18-49579032-INS-60;SVTYPE=INS;SVLEN=60;TIG_REGION=h1tg000950l:360-419;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;AC=1 GT:SUPP 1/0:1 chr18 49579764 pbsv.DEL.782 CTTTCTTTTCTTTTCTTTTCTTTTCT C 2 PASS SVTYPE=DEL;SVLEN=-25;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,1:2:0,1,0,1:4 chr18 49621067 Sniffles2.INS.F2S11 C GAGTGCAGTGGCGCGATCTCGGCTCACTGCAATCTCCGCCTTCCTGGTTCAAGTGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGGATTACAGGCTTGTGCCACCACACCCAGTTACTTTTCTATATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTCTTGAACTCCTGGCAAGTGATCCATCCACCTCAGCCCCACGAAGTGCTGGGATTACAGGCATGAGCCACCACTCTC 3 PASS PRECISE;SVTYPE=INS;SVLEN=245;SUPPORT=3;COVERAGE=5,3,3,3,3;STRAND=+-;AF=1;STDEV_LEN=1;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=346.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:0,3:3:0,0,2,1:6 chr18 49646600 chr18-49646601-DEL-99 TCAGGAACAATATGAACCTGTGATCAGTTAAGCAGCTGATCAATCATTACCTCCTCCTCCTTGCTCTTGTTACCCAATAAATACAAAGGGCCGTAGAAGC T 4 . ID=chr18-49646601-DEL-99;SVTYPE=DEL;SVLEN=-99;TIG_REGION=h2tg002396l:1079-1079;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 0/1:1 -chr18 49761326 chr18-49761327-INS-1028 C CCCCCACAACCCCCCACACACACATCCCCCGCACACCCCATACCCCCCCACACCCCCCACACCCCATATCCCACACACCCCATACCCTCCCACACACCCCACACACATACCCACACGTACCCCCCGCACACCCCATACCCCCCCACACACCCCACCCCCCACACACACACATACCCCCCGCACACCCCATACTCCCCTACACCCCCCACACACACCCACACACCCCCCCGTGCACACCCCATACCCCCCACACACACCCCCCGCACACCCCATACCCCCCACACACCCACCCCACACACCCCATACCCTCCCACACACCCCACACACACCCACACACACCCACACACACACACCCTGCACACCCCATACCCCCCACATCCCACACACCCCATACCCCCCACACACCCCATACCCCCCACACTTACCCATATACACACCCCCACACACCCCCATACCCCCCACACCCCCCCACATCCCCCCACACCCCCCACACACCCCGCACACCCCATACCCAACACCCCACACACACCCACACACACACCCCCTGCACACCCCATATCCCCCCACACACCCCATACCCCCACACACCCCATACCCCCCACACGTGCACCCCCCACACACCCCACGCCTCGTACCCCCACACACACCTTGTACCCCCACACACTCACACACCCCCACACACGCACCACCACACACGCACCCCACACGCACCCCACACACACCCTGTACCCACCCCACACGCACCCCACACGCACCCCACATACACCCCACACGTACCCCATCCCCCACACACACCTCACACACGCACCCCCACACACACCCCACACACGCACTCCCACACACATACCCACACACCCCATACCCCCGCACAGATGCACCCCCACACACAAACCACACACACCCCACACACACACCCCCACACACCCCCCACATATCCCATACCCCCAACACACGTGCCCCCACACACACCCCACACACACCCCGTACCCCCCACATACACTCCACACACACGCACCCCAGACACACACA 4 . ID=chr18-49761327-INS-1028;SVTYPE=INS;SVLEN=1028;TIG_REGION=h1tg016270l:49612-50639;QUERY_STRAND=+;HOM_REF=0,7;HOM_TIG=0,7;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=348.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,8:9:.:8:22:1,0,1,7:7 +chr18 49761326 chr18-49761327-INS-1028 C CCCCCACAACCCCCCACACACACATCCCCCGCACACCCCATACCCCCCCACACCCCCCACACCCCATATCCCACACACCCCATACCCTCCCACACACCCCACACACATACCCACACGTACCCCCCGCACACCCCATACCCCCCCACACACCCCACCCCCCACACACACACATACCCCCCGCACACCCCATACTCCCCTACACCCCCCACACACACCCACACACCCCCCCGTGCACACCCCATACCCCCCACACACACCCCCCGCACACCCCATACCCCCCACACACCCACCCCACACACCCCATACCCTCCCACACACCCCACACACACCCACACACACCCACACACACACACCCTGCACACCCCATACCCCCCACATCCCACACACCCCATACCCCCCACACACCCCATACCCCCCACACTTACCCATATACACACCCCCACACACCCCCATACCCCCCACACCCCCCCACATCCCCCCACACCCCCCACACACCCCGCACACCCCATACCCAACACCCCACACACACCCACACACACACCCCCTGCACACCCCATATCCCCCCACACACCCCATACCCCCACACACCCCATACCCCCCACACGTGCACCCCCCACACACCCCACGCCTCGTACCCCCACACACACCTTGTACCCCCACACACTCACACACCCCCACACACGCACCACCACACACGCACCCCACACGCACCCCACACACACCCTGTACCCACCCCACACGCACCCCACACGCACCCCACATACACCCCACACGTACCCCATCCCCCACACACACCTCACACACGCACCCCCACACACACCCCACACACGCACTCCCACACACATACCCACACACCCCATACCCCCGCACAGATGCACCCCCACACACAAACCACACACACCCCACACACACACCCCCACACACCCCCCACATATCCCATACCCCCAACACACGTGCCCCCACACACACCCCACACACACCCCGTACCCCCCACATACACTCCACACACACGCACCCCAGACACACACA 4 . ID=chr18-49761327-INS-1028;SVTYPE=INS;SVLEN=1028;TIG_REGION=h1tg016270l:49612-50639;QUERY_STRAND=+;HOM_REF=0,7;HOM_TIG=0,7;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=348.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:1,8:9:.:8:22:1,0,1,7:7 chr18 49767053 pbsv.INS.785 C CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 2 PASS SVTYPE=INS;SVLEN=32;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,6,6:4 chr18 49799847 pbsv.INS.786 G GGGAGCGCCTCTGCCCCGCCGCCCCGTCTGGGATGTGA 2 PASS SVTYPE=INS;SVLEN=37;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,7,5:4 chr18 49800129 pbsv.DEL.787 TGGGGGTCAGCCCCCGGCCGGCCAGCCACCCCGTCTGGGAGGGAGGTG T 2 PASS SVTYPE=DEL;SVLEN=-47;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,13:13:0,0,8,5:4 @@ -1072,7 +1072,7 @@ chr18 49810930 chr18-49810931-INS-2650 T TAACAAATAATCTGGGCTCTCCCTCTCCCTCTCCCTCTC chr18 49884057 pbsv.DEL.789 GCCAAATACAATGCCAAAAGCACAAGCCA G 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,6:7:1,0,5,1:4 chr18 49917462 pbsv.DEL.790 AAAACGTTTACTCCAGACCATGGTTTGT A 2 PASS SVTYPE=DEL;SVLEN=-27;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,1,4:4 chr18 49975034 pbsv.INS.791 C CACACACACACACACACACAG 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 -chr18 50043416 chr18-50043417-INS-90;pbsv.INS.792 T TTTAAATATATTTAAATATATTAAATATTAAATATTTAAATATATTAAATATTAAATATTAAATATATTTAAATATATTAAATATTAAATA 4 PASS ID=chr18-50043417-INS-90;SVTYPE=INS;SVLEN=90;TIG_REGION=h1tg015935l:94966-95055;QUERY_STRAND=+;HOM_REF=0,45;HOM_TIG=0,45;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=350.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:4:28:7 +chr18 50043416 chr18-50043417-INS-90;pbsv.INS.792 T TTTAAATATATTTAAATATATTAAATATTAAATATTTAAATATATTAAATATTAAATATTAAATATATTTAAATATATTAAATATTAAATA 4 PASS ID=chr18-50043417-INS-90;SVTYPE=INS;SVLEN=90;TIG_REGION=h1tg015935l:94966-95055;QUERY_STRAND=+;HOM_REF=0,45;HOM_TIG=0,45;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=350.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:4:28:7 chr18 50122633 pbsv.DEL.793 GGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA G 2 PASS SVTYPE=DEL;SVLEN=-31;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,8,4:4 chr18 50168603 pbsv.DEL.794 CTCCAGGACCCTCCCCACTAGACCCCCACCACTGTTCCAACCCTGTGTGAATCTCAGACACCACGACCCCTAACCAGGTCTTGGTCAATCACCCTCCTCACTTTCTTGTTTTGGTCTTAAGTGTCCAAAACACTCAGACTTTAATTTTTTAGTAATTTTTTAAAAGATGACATATATGGAAAAGTATAGAAATCCTAAAGAACAGCTCAATGAACTTTCATAAATTCACATATCTGTGTAAGCAGCATTCAGATCGGAAGTTACATTATCAGCATCCCAGAAGCCCCATGCCTGTGCCCACTTCTAGCCAGAAATGTGTTTTCCATCAGAAATGTATTATTTCGATCCTCCAAGCAACTATCACTTCTGAGTGATCTGTCCCCATAAAGTCAGAGAGAGAAGGGCGAAAAAGCTATATAGGGGGCTTGGCATAGTGGCTCACTCCTGTAATCACAGCACTTTGGGAGGCCAAGGTGGAGGACTGCTTGAGCCCAAGAATTGAGACCATCCTGGGCAGCATAGGGAGGCCCCATGCCTACAAAAAATAAAACTAAAAAAAAGCTAGATGTGGCAGCACATGCCTGTGGTCCCTGCTATTCAAGAGGCTGAGGCAGGAGGATCCCTTGAGCCCAAGAGGCTGCAGTGAGCGATAATGATGCCAGTATACTCCAGCCTGGGCAAAGAGCAAGACCTTGTCTCAAAAAAGAAAAGCTACATAGGAAATGCAGGGGAGGGTAATGAGTCAGCATTTAATCAAGTCCCTCCTGAGGACCAGGTAACATGACAGGTAGAGAAACCTGGCATACACCATCTTAAGCAAGTGATCAAAGTTACCACCACCAGTAACAGGACAAATTAGACATAACATGCCACCGCATGGGTTGCAATCATCATCACAGTATCCAGAGAAAAAGACATGGCCCAAGTGGAGAGCCTCTCTACAGTGACTGGCTGTAATCTACACAAACTGTCCAGGCCATGAAAGTCAAGGAAATACTGAGGAAACGTTCCAGATTGGAAGAGACTAGAGAGAGATGACAAGTGGGTGTGATGTATAACCCTGGATTGGTACCGTTATCATAAAGGGTATTACTGAGTCAATGGACAAAACTTTAAACCCAATTCAAGGTATATGAGTGTGCCTTGAATTACTCTTGCAATTTTCCTGAAGTCTGAAAAGATTTCAAAACACAGTATTTTAAAGAAATTTTTGCTCTTCACCTTTCCACTTGCTTTCCACCTAGAATACAGATGTGAGGATCAAGTCCCATGATGAGCAAGGTTAGCAGGACAATGAGATAGGAGCCGTGGACCTGCCACACGGGCCCCAGACTGCCCACCTCCAAAAATACTGTAGTATGGAATAAAATAAACTCTTTGATTGTCGATGTCATGGTAGTAGGGTTTTCTGTTACAGCCAAAGAAGTCATAACTGATACATTTAATAGGTAGAAGACAGAAGACTATGATTCCATTACTATTTCCCCACTATTGCTAATAGGAAAACCCACCAAAAAGTTAACAGAAAAGCTGTGACTTGCTGCATGGACAAGAGGGCAGAGAAGCTGTGAGAATGCATTTTGTCCAGCAGTGGGCAGTGAGGAAAGGAGGCTTGGCCGGAAGCATCAGTAGCAGGGCCTCCAGGATCTCTGTAGCACCGCAGCATCGCAATGAGTCAAAGCAGGTTTTCAAGTTTTCCATCAGAAATGTACTATTTCGATAATACATTTTGACTTTTGACTAGACCACCACAAGAACACCGCCTCTATGAGAAAGATCCTAGATGCTAGACTTAAGGTAACCTTTAGAATATTACCTACAAATAAACGGGGACTTTGATAAATAACTATTCATGTATAATTTGACTTTAGAAATCATTCTATATTTTATTTTCTAATCACATTTTTATTACCATGATACCTCATGTTGGGCCAATATGCTTTCCTCTTTAAAGTTTCATTTTACCACTATTTTGCTTTCTTCTCACTCCGAACAGTACTGTGGGGTGACTCCAGTTGTTTCCATTTAACACATAAGAAAAAGTTGAGCAAGATTAAGCCACTGGTCCAAGGTCTCACAGCAAGGAACTGGCATAAATGGAACAAGAATTCTGAACCATGACTCCCAATCCAGTGTTCTCCTAATCCACATAGTATATCGTTAACAACACTGCCAGTTCAACATGGCTTCACTTTTTGAGATTAGAAGATTATATTATGAATGACTAGAACAAGAGATCAAGTAAGAGTAAACAGGAAAAGAGACATTTTACCCAAACTTAGAAGAAAGAACGTACAGGAAATTCAGCACTCAATCTTTCTCTACTTGCTCACATTGGTTTCAGAAGTGAAGAGCTGCAAAATCCCGTTACCCCGTGGTGAACCCACACCTGCCTCCCTGAGGCTCTCTCTCCTTGCAGCTAGCATCCCCTCAGCTAGTATTTGCCAGGCCCTCAAAATCCTACAGAAATCCCAGAATCTTGGGATACTTGGCCGCCAGTCTCATGCAGCCCTGTTCCTCAAATCTGGAAGTCCTGAATGCCTGTTCCATAAGACAGTGCTGGGCACTTGGCACGATCTTCACCCTCACAGATAAGTTGAGGAGATAAGGCAAATATGCAAAAAGTAAAGTAATCATCCAAGAGATATTAAATAACACTGCAGGCCAACGACAGCAGCAGAGGCATGAGAGGAGATGCCAAGACCATGTAATGGATGGACACGATTTACAGTAATTGCCTCTGTACAGAGAATAGAGTTCCTTAGGCTGAAGAAGTCAGGAAGGGCTTATAGAGAAGCTGCAATTTGACCTTGGTCTCGAGAGAGACCATAAACTTAGAAATATAAAGGTACAGAACATTCCAGGCAGATACAGCATGGATATGGAAAACTCAAGGTACATTCAGACGATTATGAGTGGGCTGATTCTGCTGGGGAAACAGTGGATCATACAAGGCAATAATTAAATGATAGATGATCAGTTACTATGCTCTGGATATAAGGGAGGCTTCAACCTGGCTTGAACAGAAGGGCATTTCTATCTCATGTGACAAGAAGTCCAGAGTTCTGGTGGGTTCTGCAGTGTTGTTTCAGCCCAAGTCACATGGCTGCATAGAGGAGGGGTTTTGTCAAGATGTTGAAATGGAGTTGTGGATGATCCCAGACAGGCAACCATAAATGGTTATTGTTTAGTGAGTGTCAATCCCCACCCCATGTATTTCACCCTTAAAACCAGAGGAAAGAATACAGAGAGAAAGCCAGAAGAGGCTCCTCATATAACAGCCAAATCCAAAACTCAATTCAGAAAAATCTGCAGCAATGGATCTTCTTCCTTGTGCCTATTTACTAAAAGACATATATGAATTCTTAAGAGGATTAAACCAGAATGGCTGTTCAGAGTCTGTGGAATCA C 2 PASS SVTYPE=DEL;SVLEN=-3409;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=351.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:3:21:6 chr18 50237329 pbsv.INS.795 A AAAAAATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,8,4:4 @@ -1089,14 +1089,14 @@ chr18 50959178 pbsv.DEL.804 CTTTCTTTCTTTCTTTCTTTCTTTCTT C 2 PASS SVTYPE=DEL;SVLE chr18 51130147 pbsv.INS.805 C CTTTTGTTAGTTTCTTGTATATCCTTCCAC 2 PASS SVTYPE=INS;SVLEN=29;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,1,3:4 chr18 51130147 pbsv.INS.806 C CTTTTGTTAGTTTCTTGTATATCCTTCCAC 2 PASS SVTYPE=INS;SVLEN=29;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,3:4:0,1,1,2:4 chr18 51130669 pbsv.DEL.807 TGTATACACACATACATACATGTATACGCACACATATACATACATGTATACGCACACATATACATACATGTATACGCACACACATACACATACATGTATACGCACACACATACACATACATGTATACGCAC T 2 PASS SVTYPE=DEL;SVLEN=-130;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:1,2,0,1:4 -chr18 51130928 Sniffles2.INS.F7S11 A ATACATACATGTATATACATACATGTATATACATACATACATGTATATATACATACATACATGTGTATATACATACATACATGTGTACATACATACATGTGTATAT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=106;SUPPORT=3;COVERAGE=4,3,3,3,3;STRAND=+-;AF=1;STDEV_LEN=17.673;STDEV_POS=20.809;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=354.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:1,3:4:0,1,1,2:6 +chr18 51130928 Sniffles2.INS.F7S11 A ATACATACATGTATATACATACATGTATATACATACATACATGTATATATACATACATACATGTGTATATACATACATACATGTGTACATACATACATGTGTATAT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=106;SUPPORT=3;COVERAGE=4,3,3,3,3;STRAND=+-;AF=1;STDEV_LEN=17.673;STDEV_POS=20.809;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=354.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:1,3:4:0,1,1,2:6 chr18 51277868 pbsv.INS.809 C CGTGTGTGTGTGTGTGTGTGT 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,1,4:4 chr18 51406749 pbsv.INS.DUP.810 A ACACACACACACACACAAAA 0 PASS SVTYPE=INS;SVLEN=19;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,3,2:4 -chr18 51423422 chr18-51423423-INS-1140 A ATCTGTGTAACAAACCTGCACATCCTTCACATGTACCCTGGAACTTAAAAGTTGAAAAATTAATATTTGGTGCCTGTGTTCTGCCTTCTGTTAGATGTTTTGGAATATCAACCCCACCTGTATGCATTCAAAGTCAGCAGCCCACCACAGAAAGACAGCTAGATTTGGTTTCAGGAGCACTAGTTCCTAGATCCTTATTCTCTCCAAAGGTGGGAACTTGATTAAGTTGCTCAATTGCTCCGAACCTCCATTAATTCATCTATATAGTGGAGAAAACAATATCTGCTCTGCCCTTGTCATTGGGCTGAGGGTAGGATCATGGGAAAGAAAATGGCTGAAAACCTGCTTACCAACTGGAGGAGTCTCATTCTCAGCTCGGAGGGGGGCCATGAATGGCCTCTGGGTCCTGTTAGTGTTCCTCAAAGAATACCTAGGGGTCTTCAGTGTTTTTTCACAAGAAGAGTTAGGTGTTAGATATTTTTATGAAGTTATTGATGTTTTATATTTTAAGTTCTTGTGGAGTATATGATTTCTTTACTTTCGTTCCCTTCTCTTTTTTTCTCCAAATATTCCTCTCAAGCAGTGCATTCATTATTAAAATATAATCAGAGTGTGTTGCCAGTAAGTTAACAGCATGAGGGTAGGAAATTGAAGGCTAAAACATGAATTCTGTTTGTTAATGTTGATTGAGAAGCAAAGTAAAAATGAGACAGCAGATTTAAAATTTATTTCAAAATTCAGTTTCCATCCTCAAACTTATCGCCCTAATATTTACTCATTTTAAAATTTATATTTTGGTCATCTTTCCTACAGCAGAGATCTTTGATTTTTTTTTTTTACAAACATATTTTAGTTTTTAAATTATTTGCTTTGTTACCATTATTAACACCTTGCCACTTTGCAGTTTCACTGTTTTAAAACAAAGATTCTATTAATTTAAGGTTGAACGTTTCTTTTCGGTGATGTCTTTTTTCATTTTTAAAAACAGCCTTAGTGAGATATAATTCATATATCATATAATTTACTCATTTAAAGTGTGTAACTCAATGGCTTTTACTATATTCACAGAGATGTGCAACCATCACCATAAACAATATTAGAACACTTTTATCATCCCCGAAAAAAACCTCATACCTTTTAG 4 . ID=chr18-51423423-INS-1140;SVTYPE=INS;SVLEN=1140;TIG_REGION=h1tg004715l:99731-100870;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=355.0 GT:AD:DP:SAC:SUPP 0/1:9,2:11:4,5,1,1:5 +chr18 51423422 chr18-51423423-INS-1140 A ATCTGTGTAACAAACCTGCACATCCTTCACATGTACCCTGGAACTTAAAAGTTGAAAAATTAATATTTGGTGCCTGTGTTCTGCCTTCTGTTAGATGTTTTGGAATATCAACCCCACCTGTATGCATTCAAAGTCAGCAGCCCACCACAGAAAGACAGCTAGATTTGGTTTCAGGAGCACTAGTTCCTAGATCCTTATTCTCTCCAAAGGTGGGAACTTGATTAAGTTGCTCAATTGCTCCGAACCTCCATTAATTCATCTATATAGTGGAGAAAACAATATCTGCTCTGCCCTTGTCATTGGGCTGAGGGTAGGATCATGGGAAAGAAAATGGCTGAAAACCTGCTTACCAACTGGAGGAGTCTCATTCTCAGCTCGGAGGGGGGCCATGAATGGCCTCTGGGTCCTGTTAGTGTTCCTCAAAGAATACCTAGGGGTCTTCAGTGTTTTTTCACAAGAAGAGTTAGGTGTTAGATATTTTTATGAAGTTATTGATGTTTTATATTTTAAGTTCTTGTGGAGTATATGATTTCTTTACTTTCGTTCCCTTCTCTTTTTTTCTCCAAATATTCCTCTCAAGCAGTGCATTCATTATTAAAATATAATCAGAGTGTGTTGCCAGTAAGTTAACAGCATGAGGGTAGGAAATTGAAGGCTAAAACATGAATTCTGTTTGTTAATGTTGATTGAGAAGCAAAGTAAAAATGAGACAGCAGATTTAAAATTTATTTCAAAATTCAGTTTCCATCCTCAAACTTATCGCCCTAATATTTACTCATTTTAAAATTTATATTTTGGTCATCTTTCCTACAGCAGAGATCTTTGATTTTTTTTTTTTACAAACATATTTTAGTTTTTAAATTATTTGCTTTGTTACCATTATTAACACCTTGCCACTTTGCAGTTTCACTGTTTTAAAACAAAGATTCTATTAATTTAAGGTTGAACGTTTCTTTTCGGTGATGTCTTTTTTCATTTTTAAAAACAGCCTTAGTGAGATATAATTCATATATCATATAATTTACTCATTTAAAGTGTGTAACTCAATGGCTTTTACTATATTCACAGAGATGTGCAACCATCACCATAAACAATATTAGAACACTTTTATCATCCCCGAAAAAAACCTCATACCTTTTAG 4 . ID=chr18-51423423-INS-1140;SVTYPE=INS;SVLEN=1140;TIG_REGION=h1tg004715l:99731-100870;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=355.0 GT:AD:DP:SAC:SUPP 1/0:9,2:11:4,5,1,1:5 chr18 51435147 pbsv.DEL.812 ATTTTTTTTTTTTTTTTTTTTT A 2 PASS SVTYPE=DEL;SVLEN=-21;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,5:10:3,2,4,1:4 chr18 51463713 pbsv.INS.813 A ATCCAGCTGTCTATTTCCCCAATGCTGTGGAGCCACAGCCG 2 PASS SVTYPE=INS;SVLEN=40;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 chr18 51575604 pbsv.INS.DUP.814 C CTCATGCTACAAGTCCATTGTGGGTCAGCTTTATCTTTATTCCTCTTC 0 PASS SVTYPE=INS;SVLEN=47;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,4,6:4 -chr18 51689848 chr18-51689849-INS-6075 T TCAGTGAGGTTTTTCTTTCTTTTTTTTTTTTTTTTCTCTTTTTTTTATTTTTATTTTTATTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATAGATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCAAGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTACTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGCATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTTTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCCAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATTATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCATCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATATATATTCTGTTGATTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTTGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCACATCGGCTCCTGAGGCTTCTGCATTCTTCACATAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCATTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACAGTTAAGTCTGCAGAGGTTACTGCTGTCTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCTGCTGCTTTGTTTGCCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCACCCCTGCTTCGGCTCGCGCAGGGTGAGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTAACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCTC 4 . ID=chr18-51689849-INS-6075;SVTYPE=INS;SVLEN=6075;TIG_REGION=h1tg004491l:238584-244658,h2tg020674l:15641-21716;QUERY_STRAND=+,-;HOM_REF=0,14;HOM_TIG=0,14;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=356.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:6,1:7:4:2:8:5,1,0,1:7 +chr18 51689848 chr18-51689849-INS-6075 T TCAGTGAGGTTTTTCTTTCTTTTTTTTTTTTTTTTCTCTTTTTTTTATTTTTATTTTTATTTTTTATTATACTCTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATAGATGTGCCATGCTGGTGCGCTGCACCCACTAACGTGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGTCCAAGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTACTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTCTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGTCTTTTGTTGCCATTGCTTTTGGTGTTTTGGACATGAAGTCCTTGCCCACGCCTATGTCCTGAATGGTAATGCCTAGGTTTTCTTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGATATGTGGCATTATTTCTGAGGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTCATTGGTAGCTTGATGGGGATGGCATTGCATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTGTCCTCTTTTATTTCCTTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTCTCCTGCCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTTTGCCAGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATTCTCTTTTTTGGTTGTGTCTCTGCCCGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTGAATCCATCTGGTCCTGGACTCTTTTTGGTTGGTAAACTATTGATTATTGCCACAATTTCAGAGCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCCAGGAATTTATCCATTTCTTCTAGATTTTCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATTATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCTTTCAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTGTGTCTCTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTGTGATGTTAGGGTGTCAATTTTGGATCTTTCCTGCTTTCTCTTGTAGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGCATCCCAGAGATTCTGGTATGTGGTGTCTTTGTTCTCGTTGGTTTCAAAGAACATCTTTATTTCTGCCTTCATTTCGTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCCTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGCTGAAAAAAATATATATTCTGTTGATTGGGGTGGAGAGTTCTGTAGATGTCTATTAGGTCTGCTTGGTGCAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGCAGAATTTAGTCCATTTATATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTGATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTTACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGCGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTATAAAGTATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTTCCTTTGAGGGTAACCCGACCTTTCTCTCTGGCTGCCCTTAACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGCAGAGTGTTTTCCAACTTGGTTCCATTCTCCACATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTTATTCTTTTTTCTCTAAACTTCCCTTCTTGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCACATCGGCTCCTGAGGCTTCTGCATTCTTCACATAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAATCATTCTCCATCCAGCTTTGTTCTGTTGCTGGTGAGGAACTGCATTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTAGATGTCCTTTCTGGTTGTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCGGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACAGTTAAGTCTGCAGAGGTTACTGCTGTCTTTTGTTTGTCTGTGCCCTGCCCCCAGAGGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCCTGCTGCTTTGTTTGCCTAAGCAAGCCTGGGCAATGGCGGGCGCCCCTCCCCCAGCCTCGTTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCTGAGCCAGGTGTGGGATATAGTCTCGTGGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGTCCGTCACCCCTTTCTTTGACTCGGAAAGGGAACTCCCTGACCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCACCCCTGCTTCGGCTCGCGCAGGGTGAGCACACACACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCGGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTAACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTCGGCCATCTTGGCTCCTCCCTC 4 . ID=chr18-51689849-INS-6075;SVTYPE=INS;SVLEN=6075;TIG_REGION=h1tg004491l:238584-244658,h2tg020674l:15641-21716;QUERY_STRAND=+,-;HOM_REF=0,14;HOM_TIG=0,14;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=356.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:6,1:7:4:2:8:5,1,0,1:7 chr18 52205046 pbsv.INS.816 A AGGGAAGGGAAGGGAAGGGAA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,5:13:4,4,2,3:4 chr18 52272145 chr18-52272146-DEL-111 ATATATATCATATATGATATATATAATATATCATATATGATATTTAATAATTATATATTATATTTAATAATTATATAATATAATTATATGTTATATTTAATAATTATATAAT A 4 . ID=chr18-52272146-DEL-111;SVTYPE=DEL;SVLEN=-111;TIG_REGION=h1tg023576l:31941-31941;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 chr18 52272148 pbsv.DEL.817 TATATCATATATGATATATATAATATATCATATATGATATTTAATAATTATATATTATATTTAATAATTATAT T 2 PASS SVTYPE=DEL;SVLEN=-72;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,2,6:4 @@ -1107,27 +1107,27 @@ chr18 52332051 pbsv.DEL.821 GCTCTCTCTGAACAGGGAACCTC G 2 PASS SVTYPE=DEL;SVLEN=-2 chr18 52427815 pbsv.DEL.822 TCTTCCTTCCTTCCTTCCTTTCTTCCTTC T 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,2,4:4 chr18 52515606 pbsv.INS.823 C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2 PASS SVTYPE=INS;SVLEN=30;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,4,1:4 chr18 52581175 pbsv.INS.DUP.824 T TATCTATATATCTTATCTATCTATCTATCTAT 0 PASS SVTYPE=INS;SVLEN=31;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,4,7:4 -chr18 52642031 chr18-52642032-DEL-52;pbsv.DEL.825 TATATATATATATATACTGTGGTGTGTGTGTGTATATATATATATATATACAC T 4 PASS ID=chr18-52642032-DEL-52;SVTYPE=DEL;SVLEN=-52;TIG_REGION=h1tg002390l:245998-245998;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=358.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:7:5:30:7 +chr18 52642031 chr18-52642032-DEL-52;pbsv.DEL.825 TATATATATATATATACTGTGGTGTGTGTGTGTATATATATATATATATACAC T 4 PASS ID=chr18-52642032-DEL-52;SVTYPE=DEL;SVLEN=-52;TIG_REGION=h1tg002390l:245998-245998;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=358.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:7:5:30:7 chr18 52642044 pbsv.DEL.826 ATACTGTGGTGTGTGTGTGTATATATATA A 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,7:12:0,5,6,1:4 chr18 52700272 pbsv.DEL.827 GCACACATGCACACACATGCACATCCACA G 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,4,7:4 chr18 52846608 pbsv.DEL.828 AACACACACACACACACACACACACACAC A 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,7,2:4 chr18 52927323 pbsv.INS.829 T TACATATATACACGTATATATGTGTATATAC 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 chr18 53041110 pbsv.INS.830 G GTGCCTATGTCCTGAATGGTAT 2 PASS SVTYPE=INS;SVLEN=21;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,6:14:5,3,3,3:4 -chr18 53047252 chr18-53047253-DEL-60;pbsv.DEL.831 ATATATATATATATATATATATATATATATATATATAATTTTATATATATATATATAATTT A 4 PASS ID=chr18-53047253-DEL-60;SVTYPE=DEL;SVLEN=-60;TIG_REGION=h1tg001449l:360532-360532;QUERY_STRAND=+;HOM_REF=0,12;HOM_TIG=0,12;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=359.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:7:8:47:7 +chr18 53047252 chr18-53047253-DEL-60;pbsv.DEL.831 ATATATATATATATATATATATATATATATATATATAATTTTATATATATATATATAATTT A 4 PASS ID=chr18-53047253-DEL-60;SVTYPE=DEL;SVLEN=-60;TIG_REGION=h1tg001449l:360532-360532;QUERY_STRAND=+;HOM_REF=0,12;HOM_TIG=0,12;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=359.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:7:8:47:7 chr18 53066353 pbsv.DEL.832 GTATATATATATATATATATATATATATA G 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:1,2,1,1:4 chr18 53085985 chr18-53085986-DEL-571 TCTTCTCCTTCTCCTTCTTCTCCTTCTCCTTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCTTCTCCTTCTCCTTCTCCCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCTTCTCTTCCTCTTCTCTTCTTCTTCTTTTCTTCTTCTTCTTTTCTTCTTTCCTTCCCTTCTTCTTCTTCCGTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTTCTTCTTCCTTCTTCTTCTTCTTCTTTCTTCTTCTTC T 4 . ID=chr18-53085986-DEL-571;SVTYPE=DEL;SVLEN=-571;TIG_REGION=h2tg010534l:158529-158529;QUERY_STRAND=-;HOM_REF=0,5;HOM_TIG=0,5;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=360.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,3:5:1:3:1:0,2,1,2:7 chr18 53086169 pbsv.DEL.834 TCTTCTCTTCTTCTTCTTTTCTTCTTCTTCTTTTCTTCTTTCCTTCCCTTCTTCTTCTTCCGTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCTTTCTTCTTCTTCTTTCTTCTTCTTCCTTTCTTCTTCTTCTTCTTTCTTCTTCCTTCTTCTTCTTCTTCTTTCTTCTTCTTC T 2 PASS SVTYPE=DEL;SVLEN=-387;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:1,2,0,1:4 chr18 53128866 pbsv.DEL.835 CACACATATATATATATATATAT C 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,5:9:2,2,3,2:4 chr18 53148865 pbsv.INS.836 C CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=29;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,8:14:2,4,4,4:4 chr18 53206125 chr18-53206126-INS-76 A AATACATATACATCTATATGTATACATATATTATACATGTATAATATTACTATATATTATACATATAATGTATATGT 4 . ID=chr18-53206126-INS-76;SVTYPE=INS;SVLEN=76;TIG_REGION=h2tg010534l:38920-38995;QUERY_STRAND=-;HOM_REF=0,12;HOM_TIG=0,12;AC=1 GT:SUPP 0/1:1 -chr18 53206135 chr18-53206136-INS-86 C CATCTATATGTATACATATATTATACATGTATAATATATACTATATATATTATACATATAATGTATAATATATGTATACATATACAT 4 . ID=chr18-53206136-INS-86;SVTYPE=INS;SVLEN=86;TIG_REGION=h1tg017276l:10968-11053;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=361.1 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:5 +chr18 53206135 chr18-53206136-INS-86 C CATCTATATGTATACATATATTATACATGTATAATATATACTATATATATTATACATATAATGTATAATATATGTATACATATACAT 4 . ID=chr18-53206136-INS-86;SVTYPE=INS;SVLEN=86;TIG_REGION=h1tg017276l:10968-11053;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=361.1 GT:AD:DP:SAC:SUPP 1/0:0,6:6:0,0,4,2:5 chr18 53206136 Sniffles2.INS.FBS11 A ATCTATATGTATACATATATTATACATGTATAATATATACTATATATATTATACATATAATGTATAATATATGTATACATATACAT 3 PASS PRECISE;SVTYPE=INS;SVLEN=80;SUPPORT=6;COVERAGE=5,6,6,6,6;STRAND=+-;AF=1;STDEV_LEN=3.775;STDEV_POS=5.774;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:16:0:6:2 -chr18 53206306 chr18-53206307-DEL-84 CATATATACATATATGTATTGTAACACATATATGTATATATGTATATATACATATATGTATTGTAACACATATATGTATATATGT C 4 . ID=chr18-53206307-DEL-84;SVTYPE=DEL;SVLEN=-84;TIG_REGION=h1tg017276l:11225-11225;QUERY_STRAND=+;HOM_REF=0,58;HOM_TIG=0,58;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=361.2 GT:DR:DV:GQ:SUPP 0/1:3:3:21:3 +chr18 53206306 chr18-53206307-DEL-84 CATATATACATATATGTATTGTAACACATATATGTATATATGTATATATACATATATGTATTGTAACACATATATGTATATATGT C 4 . ID=chr18-53206307-DEL-84;SVTYPE=DEL;SVLEN=-84;TIG_REGION=h1tg017276l:11225-11225;QUERY_STRAND=+;HOM_REF=0,58;HOM_TIG=0,58;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=361.2 GT:DR:DV:GQ:SUPP 1/0:3:3:21:3 chr18 53227190 pbsv.INS.838 G GATATATATATATATTTTTTTTTTTT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=25;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,4,5:4 -chr18 53300990 chr18-53300991-INS-52 T TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTC 4 . ID=chr18-53300991-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h2tg005499l:219743-219794;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=362.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,7:7:3:4:18:0,0,3,4:7 +chr18 53300990 chr18-53300991-INS-52 T TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTCTTTCTTTCTTTC 4 . ID=chr18-53300991-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h2tg005499l:219743-219794;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=362.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,7:7:3:4:18:0,0,3,4:7 chr18 53307893 pbsv.DEL.840 GTATGTATATATATATATATA G 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 chr18 53312900 pbsv.DEL.841 AGGAGGGAAGGGAAAGGGAGGGGAGG A 2 PASS SVTYPE=DEL;SVLEN=-25;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,0,1:4 -chr18 53399607 chr18-53399608-DEL-323;pbsv.DEL.842 CAAAGAAATCAGAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA C 4 PASS ID=chr18-53399608-DEL-323;SVTYPE=DEL;SVLEN=-323;TIG_REGION=h2tg005499l:121216-121216;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=ALU;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=363.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 +chr18 53399607 chr18-53399608-DEL-323;pbsv.DEL.842 CAAAGAAATCAGAGGGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGGCCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAA C 4 PASS ID=chr18-53399608-DEL-323;SVTYPE=DEL;SVLEN=-323;TIG_REGION=h2tg005499l:121216-121216;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=ALU;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=363.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:8:22:7 chr18 53428578 pbsv.DEL.843 AAAATATATATTTTTATATATAATTC A 2 PASS SVTYPE=DEL;SVLEN=-25;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:11,2:13:4,7,2,0:4 chr18 53428612 Sniffles2.INS.FDS11 T TTTATATATAATTATATAATATATTTTTATATATAATGTATATTTTATATATTATATATATTTTATATATAATGTATATTTTATATATTATATATA 3 PASS PRECISE;SVTYPE=INS;SVLEN=96;SUPPORT=4;COVERAGE=13,13,13,13,12;STRAND=+-;AF=0.308;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:9:4:2 chr18 53428717 pbsv.INS.844 A ATTTTATATATAATGTATATTTTATATATTATATATATTTTATATATAATGTATATTTTATATATTATATATATTTTATATATAATGTATATTTTATATATTATATATATTTTATATATAATAAATTATATATTATATATTTTATATATAATAAATTATATATTATATATTTTATATATAATAAATTATATATTATATATTTTATATATAATAAATTATATATTATATATTTTATATATAATAAATTTTATATTATATATTTTATATATAATAAATTATATATTATATATTTTATATATAATAAATTATATATTATATATTTTATATATAATAAATTATATATTATATAT 2 PASS SVTYPE=INS;SVLEN=349;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:9,4:13:4,5,2,2:4 @@ -1136,23 +1136,23 @@ chr18 53429262 pbsv.INS.845 T TTTCACAGACAACTTTTTTCACCTATCATTTGCC 2 PASS SVTYPE=I chr18 53460170 Sniffles2.INS.FFS11 G GGGTCTTCATATTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 3 PASS PRECISE;SVTYPE=INS;SVLEN=322;SUPPORT=5;COVERAGE=9,9,9,9,8;STRAND=+-;AF=0.556;STDEV_LEN=1;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=365.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:4,5:9:2,2,3,2:6 chr18 53468621 pbsv.INS.847 G GTTATTTATTTATTTTATTTA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:1,3,2,1:4 chr18 53584118 pbsv.INS.848 C CTGTGTGTGTGTGTGTGTGTG 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,4,8:4 -chr18 53741228 chr18-53741229-DEL-50;pbsv.DEL.850 GCATATCTAGATATGTATAGTTTATACATATCTAGATATGTATAGTTTATA G 4 PASS ID=chr18-53741229-DEL-50;SVTYPE=DEL;SVLEN=-50;TIG_REGION=h1tg001450l:119592-119592;QUERY_STRAND=-;HOM_REF=0,143;HOM_TIG=0,143;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=366.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:6:3:7 +chr18 53741228 chr18-53741229-DEL-50;pbsv.DEL.850 GCATATCTAGATATGTATAGTTTATACATATCTAGATATGTATAGTTTATA G 4 PASS ID=chr18-53741229-DEL-50;SVTYPE=DEL;SVLEN=-50;TIG_REGION=h1tg001450l:119592-119592;QUERY_STRAND=-;HOM_REF=0,143;HOM_TIG=0,143;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=366.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:6:3:7 chr18 53741372 chr18-53741373-INS-103 G GTTTTATACATATCTAGATATGTATAGTTTATACATATCTAGATATGTATAGTTTATACATATCTAGATATGTATAGTTTTATACATATCTAGATATGTATAGT 4 . ID=chr18-53741373-INS-103;SVTYPE=INS;SVLEN=103;TIG_REGION=h2tg010157l:219344-219446;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=366.1 GT:AD:DP:SAC:SUPP 0/1:6,2:8:1,5,2,0:5 chr18 53741398 Sniffles2.INS.100S11 T TTTATACATATCTAGATATGTATAGTTTTATACATATCTAGATATGTATAGTTTTATACATATCTAGATATGTATAGT 3 GT IMPRECISE;SVTYPE=INS;SVLEN=100;SUPPORT=2;COVERAGE=7,8,8,7,7;STRAND=+;AF=0.25;STDEV_LEN=15.556;STDEV_POS=119.501;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:3:6:2:2 chr18 53834395 pbsv.INS.851 C CCAGTGAGATGAACCCGGTACCT 2 PASS SVTYPE=INS;SVLEN=22;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,3,9:4 chr18 53861407 pbsv.INS.852 A AGGGAGGGAAGGAGGGAGGAGGGAG 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,0,4:4 chr18 53885184 pbsv.DEL.853 TGGGGTGAGGGAGAAAGAGAGATGGGGTGGTGGAGAAAGAGAGATGGGGTGGGGGAGAAAGAC T 2 PASS SVTYPE=DEL;SVLEN=-62;SVANN=TANDEM;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=367.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:3:11:6 -chr18 53899356 Sniffles2.INS.102S11 C CAAAAGAAATATATTTTTTTTTCTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCGCTCCCCCCACCCCACCACAGTCCCCAGAGTATGATATTCCCCTTCATCGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAAAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCAGTCCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGATGGCTGGGTCAAATGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACCAGTTTACAGTCCCACCAACAGTGTAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGCTTTTTTATTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCCTATGTCCGCATGGTAATGCCTAGGTTTTCTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGGTATGCGGCATTATTTCTGAGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTTATTGCTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCCTTGAGAAGGTGGTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCCTAAGGAGATTTTGGGCTGAGACGATGGAGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTTCCTGCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCCGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATCTCTTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATCGGTTGTGAATCCATCTGGTCCTGGACCTCTTTTTGGTTGGTAAACTATTGATTATTGCCCCAATTTCAGCTCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGTTTAGTCCTTGGGAGGATGTATGTGTCGAGTAATGTATCCATTTCTTCTAGATTTTCCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCATTCAAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTTGTGTCTCTATTTCCTCCTCAGTATCTGCTCTGATTTGAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTATGATGTTAGGGTGTCAATTTTGATCTTTCCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAGAGATCCTGGATGTTGTGTCTTTGTCTCATTGGTTTCAAAGAATATCTTTATTTCTGCCTTCATTTCTTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCTTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGATGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTACTGTAAGATGTCTATTAGGTCCGCTTGGTACAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATACCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGTCTTGACTCTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGGAGCATTTAGTCCATTTACATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTCACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGACGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTATTTCTCCTTCACTTATGAAACTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGAGGATAACCCGACCTTTCTCTCTGGCTGCCCTTACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGTAGAGTGTTTTCCAACTGGTTCCATTCTCCCCATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTATTCTTTTTTCTCTAACCTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATTGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAGTCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTGGATGTCCTTTCTGTTTGTAAGTTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCTGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGAGAACCACTGCTCTCTTCAAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCTGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGCGCCCCTCCCCCCAGCCTCCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGCTGCGCCGTTTTTTAAGCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCGATTTTCCAGGTGCGTCCGTCACCCTTTCTTTGACTCGGAAAGGTAACTCCCTGACCCCTTGCACTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCCCGGTGCGCGCACCCACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCAGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACCGCTGGGAGCTGTAGACCGGAGCTGTACCTATTCGGCCATCTTGGCTCCTCCTCCCC 3 PASS PRECISE;SVTYPE=INS;SVLEN=6033;SUPPORT=2;COVERAGE=6,5,5,5,9;STRAND=+;AF=1;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=1;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=368.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:5,1:6:4,1,1,0:6 +chr18 53899356 Sniffles2.INS.102S11 C CAAAAGAAATATATTTTTTTTTCTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCCAATGCTATCCCTCCCCGCTCCCCCCACCCCACCACAGTCCCCAGAGTATGATATTCCCCTTCATCGTGTCCATGTGATCTCATTGTTCAATTCCCACCTATGAGTGAAAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGATTTCCAATTTCATCCAGTCCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAATGCCACAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAGTCATTTGGGTATATACCCAGTAATGGATGGCTGGGTCAAATGTATTTCTAGTTCTAGATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTGAACCAGTTTACAGTCCCACCAACAGTGTAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTGACTTTTAATGATTGCCATTCTAACTGGTGTGAGATGATATCTCATAGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGATGAGCATTTTTTCATGTGTTTTTTGGCTGCATAAATGTCTTCTTTTGAGAAGTGTCTGTTCATGTCCTTCGCCCACTTTTTGATGGGGTTGTTTGCTTTTTTATTGTAAATTTGTTTGAGTTCATTGTAGATTCTGGATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATTTTCTCCCATGTTGTAGGTTGCCTGTTCACTCTGATGTAGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATTTTGGCTTTTGTTGCCATTGCTTTTGGTGTTTTAGACATGAAGTCCTTGCCCATGCCCTATGTCCGCATGGTAATGCCTAGGTTTTCTCTAGGGTTTTTATGGTTTTAGGTCTAACGTTTAAATCTTTAATCCATCTTGAATTGATTTTTGTATAAGGTGTAAGGAAGGGATCAGTTTCAGCTTTCTACATATGGCTAGCCAGTTTTCCCAGCACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCAGATAGTTGTAGGTATGCGGCATTATTTCTGAGGCTCTGTTCTGTTCCATTGATCTATATCTCTGTTTTGGTACCAGTACCATGCTGTTTTGGTTACTGTAGCCTTGTAGTATAGTTTGAAGTCAGGTAGTGTGATGCCTCCAGCTTTGTTCTTTTGGCTTAGGATTGACTTGGCGATGCGGGCTCTTTTTTGGTTCCATATGAACTTTAAAGTAGTTTTTTCCAATTCTGTGAAGAAAGTTATTGCTAGCTTGATGGGGATGGCATTGAATCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGTTCTTCCATTTGTTTGTATCCTCTTTTATTTCCTTGAGAAGGTGGTTGTAGTTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTGTTGGTGTATAAGAATGGCTTGTGATTTTTGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCCTAAGGAGATTTTGGGCTGAGACGATGGAGTTTTCTAGATAAACAATCATGTCGTCTGCAAACAGGGACAATTTGACTTCCTCTTTTCCTAATTGAATACCCTTTATTTCCTTTCCTGCTGATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGCGGTGAGAGAGGGCATCCCTGTCTTGTGCCCGTTTTCAAAGGGAATGCTTCCAGTTTTTGCCCATTCAGTATGATATTGGGCTGTGGGTTTGTCATAGATAGCTCTTATTATTTGAAATACGTCCCATCAATACCTAATTTATTGAGAGTTTTTAGGCATGAAGGGTTGTTGAATTTTGTCAAAGGCTTTTTCTGCATCTATTGAGATAATCATGTGGGTTTTTGTCTTTGGCTCTGTTTATATGCTGGATTACATTTATTGATTTGCGTATATTGAACCAGCCTTGCATCCCAGGATGAAGCCCACTTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCAGTTTGCCAGTATTTTATTGAGGATTTTTGCATCAATGTTCATCAAGGATATTGGTCTAAAATCTCTTTTTTGGTTGTGTCTCTGCCTGGCTTTGGTATCAGAATGATGCTGGCCTCATAAAATGAGTTAGGGAGGATTCCCTCTTTTTCTATTGATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAATCGGTTGTGAATCCATCTGGTCCTGGACCTCTTTTTGGTTGGTAAACTATTGATTATTGCCCCAATTTCAGCTCCTGTTATTGGTCTATTCAGAGATTCAACTTCTTCCTGTTTAGTCCTTGGGAGGATGTATGTGTCGAGTAATGTATCCATTTCTTCTAGATTTTCCTAGTTTATTTGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTTGTATTTCTGTGGGATCGGTGGTGATATCCCCTTTATCATTTTTTATTGTGTCTATTTGATTCTTCTCTCTTTTTTCTTTATTAGTCTTGCTAGCGGTCTATCAATTTTGTTGATCCATTCAAAAAAACCAGCTCCTGGATTCATTGATTTTTTGAAGGGTTTTTTTGTGTCTCTATTTCCTCCTCAGTATCTGCTCTGATTTGAGTTATTTCTTGCCTTCTGCTAGCTTTTGAATGTGTTTGCTCTTGCTTTTCTAGTTCTTTTAATTATGATGTTAGGGTGTCAATTTTGATCTTTCCCTGCTTTCTCTTGTGGGCATTTAGTGCTATAAATTTCCCTCTACACACTGCTTTGAATGTGTCCCAGAGATCCTGGATGTTGTGTCTTTGTCTCATTGGTTTCAAAGAATATCTTTATTTCTGCCTTCATTTCTTTATGTACCCAGTAGTCATTCAGGAGCAGGTTGTTCAGTTTCCATGTAGTTGAGCGGCTTTGAGTGAGATTCTTAATCTTGAGTTCTAGTTTGATTGCACTGTGGTCTGAGAGATAGTTTGTTATAATTTCTGTTCTTTTACATTTGCTGAGGAGAGCTTTACTTCCAACTATGTGGTCAATTTTGGAATAGGTGTGGTGTGGTGATGAAAAAAATGTATATTCTGTTGATTTGGGGTGGAGAGTACTGTAAGATGTCTATTAGGTCCGCTTGGTACAGAGCTGAGTTCAATTCCTGGGTATCCTTGTTGACTTCTGTCTCGTTGATCTGTCTAATGTTGACAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTCAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATACCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTGTTTTCCATTTGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGTCTTGACTCTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGGAGCATTTAGTCCATTTACATTTAAAGTTAATATTGTTATGTGTGAATTTGATCCTGTCATTATGATGTTAGCTGGTTATTTTGCTCATTAGTTGATGCAGTTTCTTCCTAGTCTCGATGGTCTTCACATTTTGGCATGATTTTGCAGCGGCTGGTACCGGTTGTTCCTTTCCATGTTTAGACGCTTCCTTCAGGAGCTCTTTTAGGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTTGTCTGTAAAGTATTTTATTTCTCCTTCACTTATGAAACTTAGTTTGGCTGGATATGAAATTCTGGGTTGAAAATTCTTTTCTTTAAGAATGTTGAATATTGGGCCCCCACTCTCTTCTGGCTTGTAGGGTTTCTGCCGAGAGATCCGCTGTTAGTCTGATGGGCTTCCCTTTGAGGATAACCCGACCTTTCTCTCTGGCTGCCCTTACATTTTTTCCTTCATTTCAACTTTGGTGAATCTGACAATTATGTGTCTTGGAGTTGCTCTTCTCGAGGAGTATCTTTGTGGCGTTCTCTGTATTTCCTGAATCTGAACGTTGGCCTGCCTTGCTAGATTGGGGAAGTTCTCCTGGATAATATCCTGTAGAGTGTTTTCCAACTGGTTCCATTCTCCCCATCACTTTCAGGTACACCAATCAGACGTAGATTTGGTCTTTTCACATAGTCCCATATTTCTTGGAGGCTTTGCTCATTTCTTTTATTCTTTTTTCTCTAACCTTCCCTTCTCGCTTCATTTCATTCATTTCATCTTCCATTGCTGATACCCTTTCTTCCAGTTGATCGCATTGGCTCCTGAGGCTTCTGCATTCTTCACGTAGTTCTCGAGCCTTGGTTTTCAGCTCCATCAGCTCCTTAAGCACTTCTCTGTATTGGTTATTCTAGTTATACATTCTTCTAAATTTTTTCAAAGTTTTCAACTTCTTTGCCTTTGGTTTGAATGTCCTCCCGTAGCTCAGAGTAATTTGATCGTCTGAAGCCTTCTTCTCTCAGCTCGTCAAAGTCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGAACTGCGTTCCTTTGGAGGAGGAGAGGCGCTCTGCGTTTTAGAGTTTCCAGTTTTTCTGTTCTGTTTTTTCCCCATCTTTGTGGTTTTATCTACTTTTGGTCTTTGATGATGGTGATGTACAGATGGGTTTTCGGTGTGGATGTCCTTTCTGTTTGTAAGTTTTTCCTTCTAACAGACAGGACCCTCAGCTGCAGGGTCTGTTGGAATACCCTGCCGTGTGAGGTGTCAGTGTGCCCCTGCTGGGGGGTGCCTCCCAGTTAGGCTGCTCTGGGGTCAGGGGTCAGGGACCCACTTGAGGAGGCAGTCTGCCCGTTCTCAGATCTCCAGCTGCGTGCTGGAGAACCACTGCTCTCTTCAAAAGCTGTCAGACAGGGACATTTAAGTCTGCAGAGGTTACTGCTGTCTTTTTGTTTGTCTGTGCCCTGCCCCCAGAGTGGAGCCTACAGAGGCAGGCAGGCCTCCTTGAGCTGTGGTGGGCTCCACCCAGTTCGAGCTTCCTGGCTGCTTTGTTTACCTAAGCAAGCCTGGGCAATGGCGGCGCCCCTCCCCCCAGCCTCCGCTGCCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTAGCAATCAGCGAGATTCCGTGGGCGTAGGACCCTCCGAGCCAGGTGTGGGATATAGTCTCGTGCTGCGCCGTTTTTTAAGCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCGATTTTCCAGGTGCGTCCGTCACCCTTTCTTTGACTCGGAAAGGTAACTCCCTGACCCCTTGCACTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCCCGGTGCGCGCACCCACTGGCCTGCGCCCACTGTCTGGCACTCCCTAGTGAGATGAACCCAGTACCTCAGATGGAAATGCAGAAATCACCCGTCTTCTGCGTCGCTCACCGCTGGGAGCTGTAGACCGGAGCTGTACCTATTCGGCCATCTTGGCTCCTCCTCCCC 3 PASS PRECISE;SVTYPE=INS;SVLEN=6033;SUPPORT=2;COVERAGE=6,5,5,5,9;STRAND=+;AF=1;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=1;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=368.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:5,1:6:4,1,1,0:6 chr18 53909688 chr18-53909689-DEL-348;pbsv.DEL.855 GAACCTTATCTTAATAGATAAGAACCAATCTTAGTAGTGTTAGTAGTATCTTAGAACCAAATCTTAGTAGTGTTCCCAACTAGCGTCTTGCATCTCTTCAAATCAGAGGATGTTACTGGGAACTTGTTTCAATGCCCCCCCGGGGTTTCCCAGGATAAGATCTGAGGTAGGTAGTTGTCCCACCCAGATCAGATAGATGACCCCTAGGTGGCAGTATTGGCCACTTACATATTCCTACCAATCAGAATATCAGCTTTTTGTCCAGCCAAAATGCGTTTGAAATCACACACGATGTAATTTACAAAATAAAGTTTCACAAATAATTATTTATGGTAATATATTGACTTTA G 4 PASS ID=chr18-53909689-DEL-348;SVTYPE=DEL;SVLEN=-348;TIG_REGION=h2tg012147l:153864-153864;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=369.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:7:10:7 chr18 54123008 pbsv.INS.856 A AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2 PASS SVTYPE=INS;SVLEN=48;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,4:8:2,2,1,3:4 chr18 54123034 Sniffles2.INS.103S11 A AAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAG 3 PASS PRECISE;SVTYPE=INS;SVLEN=53;SUPPORT=4;COVERAGE=8,8,8,8,8;STRAND=+-;AF=0.5;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:28:4:4:2 chr18 54134981 pbsv.INS.857 A AAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAGAAA 2 PASS SVTYPE=INS;SVLEN=97;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,1,0:4 chr18 54168596 pbsv.DEL.858 TATTTATGTATGCATATTTGTGTGTGTGTGT T 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,5:6:0,1,0,5:4 chr18 54236038 pbsv.DEL.859 GAATGTTTTCTCTCACTATCATCTCGATCACTTCCA G 2 PASS SVTYPE=DEL;SVLEN=-35;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:1,2,1,2:4 -chr18 54305498 chr18-54305499-DEL-184;pbsv.DEL.860 GGTATTTTATTCTCTTTGTAGCAATTGTGAATGGGAGTTCACTCATGATTTGACTCTCTGTTTGTCTGTTATTGGTGTATATGAATGCTTGTGATTTTTGCACATTGATTTTGTGTCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGGTTTTGGGCTGAGACGATGGGGTTTTCTAAA G 4 PASS ID=chr18-54305499-DEL-184;SVTYPE=DEL;SVLEN=-184;TIG_REGION=h1tg003181l:57871-57871,h2tg003018l:57871-57871;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=3 GT:AD:DP:SAC:SUPP 0/1:3,1:4:2,1,1,0:5 +chr18 54305498 chr18-54305499-DEL-184;pbsv.DEL.860 GGTATTTTATTCTCTTTGTAGCAATTGTGAATGGGAGTTCACTCATGATTTGACTCTCTGTTTGTCTGTTATTGGTGTATATGAATGCTTGTGATTTTTGCACATTGATTTTGTGTCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGGTTTTGGGCTGAGACGATGGGGTTTTCTAAA G 4 PASS ID=chr18-54305499-DEL-184;SVTYPE=DEL;SVLEN=-184;TIG_REGION=h1tg003181l:57871-57871,h2tg003018l:57871-57871;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=3 GT:AD:DP:SAC:SUPP 1/1:3,1:4:2,1,1,0:5 chr18 54387303 pbsv.INS.DUP.861 C CGCCCGCCGCCATTTTGG 0 PASS SVTYPE=INS;SVLEN=17;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,0,4:4 chr18 54394424 pbsv.INS.862 C CCCTTTCTTCCTTTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTTTCTTCCTTTCCCTTCCTCCCTTCCTCCCTCCCTTCTTCCCTTCTTCCCTTCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTTCCTTCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCTTCCTCCCTTCCTCCCTCCCTTCCTTCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTTCCTTCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCTTCCTCCCTTCCTCCCTCCCTTCCTTCCTCCCTTCTCTCCTCTCCCTCCCTTCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCTTCCTTCCTCCCTT 2 PASS SVTYPE=INS;SVLEN=614;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,1:2:0,1,0,1:4 -chr18 54426593 chr18-54426594-DEL-3996;pbsv.DEL.863 TAGCCAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGTACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTTGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACGGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAGCCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGGAAAGTGTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAATTGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGACTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAGATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAACGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATATGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAG T 4 PASS ID=chr18-54426594-DEL-3996;SVTYPE=DEL;SVLEN=-3996;TIG_REGION=h2tg025092l:24240-24240;QUERY_STRAND=-;HOM_REF=0,5;HOM_TIG=0,5;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=374.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:4:11:7 +chr18 54426593 chr18-54426594-DEL-3996;pbsv.DEL.863 TAGCCAGTGGGGTGTTAAAGTCTCCCATTATTAATGTGTGGGAGTCTAAGTCTCTTTGTAGGTCACTGAGGACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATAAATATTTAGGATAGTTAGCTCCTCTTGTTGAATTGATCCCTTTACCATTATGTAATGGCCTTCTTTGTCTCTTTTGATCTTTGTTGGTTTAAAGTCTGTTTTATCAGAGACTAGGATTGCAACCCCTGCCTTTTTTTGTTTTCCATTGGCTTGGTAGATCTTCCTCCATCCTTTTATTTTGAGCCTATGTGTGTCTCTGCACGTGAGATGGGTTTCCTGAATACAGCACACTGATGGGTCTTGACTCTTTATCCAACTTGCCAGTCTGTGTCTTTTAATTGTCAACATTAGACAGATCAACGAGACAGAAAGTCAACAAGGATACCCAGGAATTGAACTCAGCTCTGTACCAAGCAGACCTAATAGACATCTACAGAACTCTCCACCCCAAATCAACAGAATATACATTTTTTTCAGCACCACACCACACCTATTCCAAAATTGACCACATAGTTGGAAGTAAAGCTCTCCTCAGCAAATGTAAAAGAACAGAAATTATAACAAACTATCTCTCAGACCACAGTGCAATCAAACTAGAACTCAGGATTAAGAATCTCACTCAAAGCCGCTCAACTACATGGAAACTGAACAACCTGCTCCTGAATGACTACTGGGTACATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGAAACCAACGAGAACAAAGACACCACATACCAGAATCTCTGGGACACATTCAAAGCAGTGTGTAGAGGGAAATTTATAGCACTAAATGCCTACAAGAGAAAGCAGGAAAGATCCAAAATTGACACCCTAACATCACAATTAAAAGAACTAGAAAAGCAAGAGCAAACACATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAAATCAGAGCAGAACTGAAGGAAATAGAGACACAAAAAACCCTTCAAAAAATCAATGAATCCAGGAGCTGGTTTTTTGAAAGGATCAACAAAATTGATAGACCGCTAGCAAGACTAATAAAGAAAAAAAGAGAGAAGAATCAAATAGACACAATAAAAAATGATAAAGGGGATATCACCACCGATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTATGCAAATAAACTAGAAAATCTAGAAGAAATGGATACATTCCTTGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAGACCAATAACAGGCTCTGAAATTGTGGCAATAATCAATAGTTTACCAACCAAAAAGAGTCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAGCTGGTACCATTCCTTCTGAAACTATTCCAATCAATAGAAAAAGAGGGAATCCTCCCTAACTCATTTTATGAGGCCAGCATCATTCTGATACCAAAGCCAGGCAGAGACACAACCAAAAAAGAGAATTTTAGACCAATATCCTTGATGAACATTGATGCAAAAATCCTCAATAAAATACTGGCAAACCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAAGTGGGCTTCATCCCTGGGATGCAAGGCTGGTTCAATATACGCAAATCAATAAATGTAATCCAGCATATAAACAGAGCCAAAGACAAAAACCACATGATTATCTCAATAGATGCAGAAAAAGCCTTTGACAAAATTCAACAACCCTTCATGCTAAAAACTCTCAATAAATTAGGTATTGATGGGACGTATTTCAAAATAATAAGAGCTATCTATGACAAACCCACAGCCAATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACGGGCACAAGACAGGGATGCCCTCTCTCACCGCTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATCAGGCAGGAGAAGGAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTTTATCTAGAAAGCCCCATCGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGGAAAGTGTCAGGATACAAAATCAATGTACAAAAATCACAAGCATTCTTATACACCAACAACAGACAAACAGAGAGCCAAATCATGGGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAAAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAAGGAAATAAAAGAGGACACAAACAATTGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGACTTTCTTCACAGAATTGGAAAAAACTACTTTAAAGTTCATATGGAACCAAAAAAGAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACACTACCTGACTTCAAACTATACTACAAGACTACAGTAACCAAAACAGCATGGTACTGGTACCAAAACAGAGATATAGATCAATGGAACAGAACAGAGCCCTCAGAAATAATGCCGCATATCTACAACTATCTGATCTTTGACAAACCTGAGAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTGCTGGGAAAACTGGCTAGCCATATGTAGAAAGCTGAAACTGGATCCCTTCCTTACACCTTATACAAAAATCAATTCAAGATGGATTAAAGATTTAAACGTTAAACCTAAAACCATAAAAACCCTAGAAGAAAACCTAGGCATTACCATTCAGGACATAGGCGTGGGCAAGGACTTCATGTCCAAAACACCAAAAGCAATGGCAACAAAAGACAAAATTGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACTACCATCAGAGTGAACAGGCAACCTACAACATGGGAGAAAATTTTCGCAACCTACTCATCTGACAAAGGGCTAATATCCAGAATCTACAATGAACTCAAACAAATTTACAAGAAAAAAACAAACAACCCCATCAAAAAGTGGGCGAAGGACATGAACAGACACTTCTCAAAAGAAGACATTTATGCAGCCAAAAAACACATGAAAAAATGCTCATCATCACTGGCCATCAGAGAGATGCAAATCAAAACCACTATGAGATATCATCTCACACCAGTTAGAATGGCAATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGCGGAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAATGAGTATAAATCATGCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAAACGTGGCACATATACACCATGGAATACTATGCAGCCATAAAAAATGATGAGTTCATATCCTTTGTAGGGACATGGATGAAATTGGAAACCATCATTCTCAGTAAACTATCGCAAGAACAAAAAACCAAACACCGCATATTCTCACTCATAGGTGGGAATTGAACAATGAGATCACATGGACACAGGAAGGGGAATATCACACTCTGGGGACTGTGGTGGGGTCGGGGGAGGGGGGAGGGATAGCATTGGGAGATATACCTAATGCTAGATGACACATTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATATGTAACTAACCTGCACAATATGCACATGTACCCTAAAACTTAGAGTATAATAAAAAAAAAAAAAAAAAAAAG T 4 PASS ID=chr18-54426594-DEL-3996;SVTYPE=DEL;SVLEN=-3996;TIG_REGION=h2tg025092l:24240-24240;QUERY_STRAND=-;HOM_REF=0,5;HOM_TIG=0,5;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=374.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:4:11:7 chr18 54779966 pbsv.INS.864 T TCCTCACCGTGTCTCCCCTCTCCTGAGGGCTTCCC 2 PASS SVTYPE=INS;SVLEN=34;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:2,1,2,3:4 chr18 54804907 pbsv.DEL.865 TTTCTTTCTTTCTTTCTTTCT T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,5:7:2,0,2,3:4 chr18 54905409 pbsv.INS.866 A AGAAGGAAGGAAGGAAGGAAG 2 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 @@ -1162,13 +1162,13 @@ chr18 55021813 pbsv.DEL.869 ATATATATATATATATATATATATATATAT A 2 PASS SVTYPE=DEL;S chr18 55143057 pbsv.INS.870 G GAGATAGATGATAGATAGAGGATA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=23;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,5:9:1,3,5,0:4 chr18 55192462 pbsv.DEL.871 GCTTAGAGCAAAGATCAAGTAGAAAGAGAAAGGCTGGAGATA G 2 PASS SVTYPE=DEL;SVLEN=-41;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,12:13:0,1,6,6:4 chr18 55206780 pbsv.DEL.872 CTCTGTGTGTGTGTGTGTGTGTGTG C 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,9,3:4 -chr18 55362436 chr18-55362437-INS-82 A AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG 4 . ID=chr18-55362437-INS-82;SVTYPE=INS;SVLEN=82;TIG_REGION=h1tg004613l:417321-417402;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=375.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,4:7:3:4:18:2,1,2,2:7 +chr18 55362436 chr18-55362437-INS-82 A AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG 4 . ID=chr18-55362437-INS-82;SVTYPE=INS;SVLEN=82;TIG_REGION=h1tg004613l:417321-417402;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=375.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:3,4:7:3:4:18:2,1,2,2:7 chr18 55365966 pbsv.DEL.874 TTATAGATATAGATATAGATATAGA T 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 chr18 55449900 pbsv.DEL.875 TTCACTACATGATGCTCAAGTTAGCATA T 2 PASS SVTYPE=DEL;SVLEN=-27;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:3,1,1,0:4 chr18 55586153 pbsv.INS.876 G GAGCAGCAGCAGCAGCAGCAGCAGC 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:1,2,1,3:4 chr18 55586153 pbsv.DEL.877 GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC G 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:1,3,1,2:4 chr18 55621514 chr18-55621515-INS-73 T TATAATATATATTATATATAATGTACATTATATATAATATTATATAATATATAATATATATATAATGTACATTA 4 . ID=chr18-55621515-INS-73;SVTYPE=INS;SVLEN=73;TIG_REGION=h1tg009141l:233308-233380,h2tg015446l:155137-155209;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=376.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,6:7:.:6:16:0,1,2,4:7 -chr18 55967687 chr18-55967688-INS-337;pbsv.INS.879 T TTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 4 PASS ID=chr18-55967688-INS-337;SVTYPE=INS;SVLEN=337;TIG_REGION=h1tg004679l:32118-32454;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=377.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:4:18:7 +chr18 55967687 chr18-55967688-INS-337;pbsv.INS.879 T TTTTTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCAACGCCATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 4 PASS ID=chr18-55967688-INS-337;SVTYPE=INS;SVLEN=337;TIG_REGION=h1tg004679l:32118-32454;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=377.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:3:4:18:7 chr18 55994438 pbsv.INS.880 C CATATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,4:10:3,3,3,1:4 chr18 56016486 pbsv.INS.881 T TATATATATATATATATATATATATTC 2 PASS SVTYPE=INS;SVLEN=26;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,3:5:2,0,2,1:4 chr18 56098409 chr18-56098410-DEL-68 TATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTATCTATCATCATCTATCTATCTATC T 4 . ID=chr18-56098410-DEL-68;SVTYPE=DEL;SVLEN=-68;TIG_REGION=h1tg006195l:240428-240428,h2tg005967l:240428-240428;QUERY_STRAND=-,-;HOM_REF=0,15;HOM_TIG=0,15;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=378.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,17:17:.:17:47:0,0,9,8:7 @@ -1181,11 +1181,11 @@ chr18 56663632 pbsv.DEL.887 TGCACAGCATATATACATATATATAT T 2 PASS SVTYPE=DEL;SVLEN chr18 56826057 Sniffles2.INS.10AS11 G GGGGGAGGGCAGGTGGGTGGTAGAGGGAAGCCATCCTTGTGAGTGAATAACCTTCAGGATGAACTTAAAGTCTGGCCTTTTGTGAGCTGTGTAATAATAACTCATGGATAAGGGTGAATTACATTAGATTGTGGCACACTATTATATATCTATATATTACATGAATTGCCCTTATAATTGATATCAAACTCATATGACCAAAAGTTGTAATTCACAAAA 3 GT PRECISE;SVTYPE=INS;SVLEN=219;SUPPORT=3;COVERAGE=13,13,13,13,13;STRAND=+-;AF=0.231;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=380.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:10,3:13:3,7,1,2:6 chr18 57001058 pbsv.DEL.889 AGAGAGAGAGAGAGAGAGAGAGAGAGA A 2 PASS SVTYPE=DEL;SVLEN=-26;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,3:9:5,1,0,3:4 chr18 57024580 chr18-57024581-INS-1725 A AATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGGCAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGGTAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGGCAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGGTAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGGTAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGG 4 . ID=chr18-57024581-INS-1725;SVTYPE=INS;SVLEN=1725;TIG_REGION=h2tg020510l:38114-39838;QUERY_STRAND=+;HOM_REF=0,23;HOM_TIG=0,43;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=381.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:5,2:7:6:2:3:2,3,0,2:7 -chr18 57024580 chr18-57024581-INS-69 A AATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTACAGG 4 . ID=chr18-57024581-INS-69;SVTYPE=INS;SVLEN=69;TIG_REGION=h1tg016682l:30954-31022;QUERY_STRAND=-;HOM_REF=0,23;HOM_TIG=0,23;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=381.1 GT:DR:DV:GQ:SUPP 0/1:5:2:6:3 +chr18 57024580 chr18-57024581-INS-69 A AATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTACAGG 4 . ID=chr18-57024581-INS-69;SVTYPE=INS;SVLEN=69;TIG_REGION=h1tg016682l:30954-31022;QUERY_STRAND=-;HOM_REF=0,23;HOM_TIG=0,23;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=381.1 GT:DR:DV:GQ:SUPP 1/0:5:2:6:3 chr18 57024581 Sniffles2.INS.10CS11 A ATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTACAGGCAGGAATAGGGATATGTGAACTATGCTAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGG 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=275;SUPPORT=7;COVERAGE=7,7,7,6,8;STRAND=+-;AF=1;STDEV_LEN=37.065;STDEV_POS=123.431;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:19:0:7:2 chr18 57024603 pbsv.INS.890 G GACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGGCAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTATAGAATTTCACATATCCCTATTCTCAG 2 PASS SVTYPE=INS;SVLEN=207;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:1,2,1,3:4 chr18 57024796 chr18-57024797-INS-138 T TATCCCTATTCTCAGGCAGGAATAGGGATATGTGAACTATGATAGTTATGTCCCTTACAGGATTTCACATATCCCTATTCTCAGACAGGAATAGGGATATGTGAGCTATGATAGTTATGTCCCTTATAGAATTTCACAA 4 . ID=chr18-57024797-INS-138;SVTYPE=INS;SVLEN=138;TIG_REGION=h1tg016682l:30600-30737;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,159;AC=1 GT:SUPP 1/0:1 -chr18 57062200 chr18-57062201-INS-957;pbsv.INS.892 T TCTGTACTCTTACAACTCAGCCATTGCTCTTTGTGGCCCAAGCCAGCTGGGTTGTCCCCAGGCCCACAGGACTCCCCACGTATGGGTTGGATCCCATCTGAACCTTGATTCCCACACCTGCCTGCTGCCAGACCTCGTCTGCCAATTGTGGCTTTGCAGAGCCCGAGGGGTGGGTTTCTCCCTGAAGACCTTCTGACAGACACCTGCACTGAGAAATCGAACTCCCAGCCTCCTTGCGGGTGGTCTCAGATCTGCCAAGCCACCAGGCGTGAGGCTGGCAAGAGCGGAAGGAAAGCTGCCGAATCAGCTCTGGAATCCCACAGCTGACGCCGCCTCTGGTTCTGCAGGAGAGGAGCCCAGCTTTGTTTTGCAGTCAAAGCTGCCTCTTCTGTTTTCTGCACCCAACCAAGATGCCATCTGAGACCGAAACTTTCCAATTCCTGTGATAAATAGAAGAGTGATGATAATGATAATGGCTGAGCCTCTTCTGGCATCTACTATGTCCTGGATACTGCTCTAGATGCTTCATGTATATTAATCCTTGCCACAACCCTGTGAGCGGTGTACTTTTATCATAGGCTATGCCCTTTTCGTAGATGGGAAGACTGAAGCACAGTGAGTTTCAGTGATGTGCCTGGGTCACGCCAGCCGCTACATGACTCCTGGTTGTGCGTCTCTAACGATTCCACCCTACTGCCCCTCTGCTGCTGCCCCTCTGCTGCCACCCAGAGCAACAGACAGCTTCAGGGCTACCCTCCTGCCTGACTTCCAGCTTCCCTTGTCACACAGAGCAGGGGACAGCAAATTGGGCAGCTGCCGCCCAGGATCAATGATCACAGTCTTTTGAGTTGAGTTCTCTGTCAGGGGATGTGGTCTCCATGCTGCCTCTTTCTACCCCTGTGCCTGGGGCAGGCATTGCCCACGGATCCGGGGCTTTCTCTCCCCTGCCAAGGCCACA 4 PASS ID=chr18-57062201-INS-957;SVTYPE=INS;SVLEN=957;TIG_REGION=h2tg020510l:77437-78393;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=382.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 +chr18 57062200 chr18-57062201-INS-957;pbsv.INS.892 T TCTGTACTCTTACAACTCAGCCATTGCTCTTTGTGGCCCAAGCCAGCTGGGTTGTCCCCAGGCCCACAGGACTCCCCACGTATGGGTTGGATCCCATCTGAACCTTGATTCCCACACCTGCCTGCTGCCAGACCTCGTCTGCCAATTGTGGCTTTGCAGAGCCCGAGGGGTGGGTTTCTCCCTGAAGACCTTCTGACAGACACCTGCACTGAGAAATCGAACTCCCAGCCTCCTTGCGGGTGGTCTCAGATCTGCCAAGCCACCAGGCGTGAGGCTGGCAAGAGCGGAAGGAAAGCTGCCGAATCAGCTCTGGAATCCCACAGCTGACGCCGCCTCTGGTTCTGCAGGAGAGGAGCCCAGCTTTGTTTTGCAGTCAAAGCTGCCTCTTCTGTTTTCTGCACCCAACCAAGATGCCATCTGAGACCGAAACTTTCCAATTCCTGTGATAAATAGAAGAGTGATGATAATGATAATGGCTGAGCCTCTTCTGGCATCTACTATGTCCTGGATACTGCTCTAGATGCTTCATGTATATTAATCCTTGCCACAACCCTGTGAGCGGTGTACTTTTATCATAGGCTATGCCCTTTTCGTAGATGGGAAGACTGAAGCACAGTGAGTTTCAGTGATGTGCCTGGGTCACGCCAGCCGCTACATGACTCCTGGTTGTGCGTCTCTAACGATTCCACCCTACTGCCCCTCTGCTGCTGCCCCTCTGCTGCCACCCAGAGCAACAGACAGCTTCAGGGCTACCCTCCTGCCTGACTTCCAGCTTCCCTTGTCACACAGAGCAGGGGACAGCAAATTGGGCAGCTGCCGCCCAGGATCAATGATCACAGTCTTTTGAGTTGAGTTCTCTGTCAGGGGATGTGGTCTCCATGCTGCCTCTTTCTACCCCTGTGCCTGGGGCAGGCATTGCCCACGGATCCGGGGCTTTCTCTCCCCTGCCAAGGCCACA 4 PASS ID=chr18-57062201-INS-957;SVTYPE=INS;SVLEN=957;TIG_REGION=h2tg020510l:77437-78393;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=382.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:5:13:7 chr18 57096518 pbsv.INS.DUP.893 A AAGAAGAAGAACAACATCAA 0 PASS SVTYPE=INS;SVLEN=19;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 chr18 57218762 pbsv.DEL.894 TTCCCATTTTACAGGTGAGGATGC T 2 PASS SVTYPE=DEL;SVLEN=-23;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,8:11:2,1,4,4:4 chr18 57278308 pbsv.DEL.895 CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT C 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,5:11:2,4,4,1:4 @@ -1193,10 +1193,10 @@ chr18 57279506 chr18-57279507-DEL-1980;pbsv.DEL.896 AAGAAGGAGTCCTGTGGCCAGGTGAGAA chr18 57393684 pbsv.INS.897 T TAGGAAGGAAGGAAGGAAGGAAGGA 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 chr18 57453584 chr18-57453585-INS-75;pbsv.INS.898 T TAGGCAGTTGTAGTCTCCTGTAATTCATAACAAGCTGTCCCTAGTTATTGAACGTGTTTACCCTGTAATCCCAGAA 4 PASS ID=chr18-57453585-INS-75;SVTYPE=INS;SVLEN=75;TIG_REGION=h1tg008847l:23325-23399,h2tg008543l:23325-23399;QUERY_STRAND=+,+;HOM_REF=0,2;HOM_TIG=0,2;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=384.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 chr18 57509940 chr18-57509941-DEL-628;pbsv.DEL.899 GCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCTGGCAGATCACCTGAGGTCAGAAGTTCGAGACCAGCCTGACCAACATGTAGAAACCCTGTCTCTACTAAATACAAAATTAGCCAGGCATGGTGGTGCATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCGGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAACAGGAGCGAGATTCCATCTCAAAAAAAAAAAAAAAAAAAAAAGAATTAATATACAGGCCAGGCACGGTGGCTCACACCTGTAATCCCAGCACTCTGGGAGGCCGAGGCAGGCGGATCACCTGAGATCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTGCTAAAAATACAAAATTAGCTGGGCATGGTAGCACACGCATGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCAGTTGAACCTGGGAGGTGGAGATTGCAGTGAGCTGAGATCATGCTATTGCACTCCAGCCTGGGCAACAGGAGCGAGATTCCATCTCAAAAAAAAAAAAAAAAAAGAATTAATATACAGGCCAGGCACGATGGCTCACA G 4 PASS ID=chr18-57509941-DEL-628;SVTYPE=DEL;SVLEN=-628;TIG_REGION=h2tg017097l:5682-5682;QUERY_STRAND=+;HOM_REF=0,17;HOM_TIG=0,17;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=385.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:3:18:7 -chr18 57510205 chr18-57510206-DEL-311;pbsv.DEL.900 AAAAAAAAAAAAAAAAAGAATTAATATACAGGCCAGGCACGGTGGCTCACACCTGTAATCCCAGCACTCTGGGAGGCCGAGGCAGGCGGATCACCTGAGATCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTGCTAAAAATACAAAATTAGCTGGGCATGGTAGCACACGCATGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCAGTTGAACCTGGGAGGTGGAGATTGCAGTGAGCTGAGATCATGCTATTGCACTCCAGCCTGGGCAACAGGAGCGAGATTCCATCTC A 4 PASS ID=chr18-57510206-DEL-311;SVTYPE=DEL;SVLEN=-311;TIG_REGION=h1tg028200l:14730-14730;QUERY_STRAND=-;HOM_REF=0,16;HOM_TIG=0,16;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=385.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:4:18:7 -chr18 57632892 chr18-57632893-INS-279 C CCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGAGGGGGGCGGCTGGCGGGCAGAGGGGCTCCTCACTTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGGCTGGGCGGGGGGCTGACCCCCCCACCTCCTTCCCGGATGGGGCGGCTGGCTGGGCGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCA 4 . ID=chr18-57632893-INS-279;SVTYPE=INS;SVLEN=279;TIG_REGION=h1tg015034l:26579-26857;QUERY_STRAND=-;HOM_REF=0,32;HOM_TIG=0,32;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=386.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,2:6:3:2:11:1,3,1,1:7 +chr18 57510205 chr18-57510206-DEL-311;pbsv.DEL.900 AAAAAAAAAAAAAAAAAGAATTAATATACAGGCCAGGCACGGTGGCTCACACCTGTAATCCCAGCACTCTGGGAGGCCGAGGCAGGCGGATCACCTGAGATCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTGCTAAAAATACAAAATTAGCTGGGCATGGTAGCACACGCATGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCAGTTGAACCTGGGAGGTGGAGATTGCAGTGAGCTGAGATCATGCTATTGCACTCCAGCCTGGGCAACAGGAGCGAGATTCCATCTC A 4 PASS ID=chr18-57510206-DEL-311;SVTYPE=DEL;SVLEN=-311;TIG_REGION=h1tg028200l:14730-14730;QUERY_STRAND=-;HOM_REF=0,16;HOM_TIG=0,16;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=385.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:3:4:18:7 +chr18 57632892 chr18-57632893-INS-279 C CCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGGCAGGGGGCTGACCCCCCCACCTCCCTCCCGGAGGGGGGCGGCTGGCGGGCAGAGGGGCTCCTCACTTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGCGGCTGGGCTGGGCGGGGGGCTGACCCCCCCACCTCCTTCCCGGATGGGGCGGCTGGCTGGGCGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACAGGGCGGCTGGCCAGGCGGGGGGCTGACCCCCCA 4 . ID=chr18-57632893-INS-279;SVTYPE=INS;SVLEN=279;TIG_REGION=h1tg015034l:26579-26857;QUERY_STRAND=-;HOM_REF=0,32;HOM_TIG=0,32;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=386.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,2:6:3:2:11:1,3,1,1:7 chr18 57633005 Sniffles2.INS.112S11 G GGGGGCTGACCCCCCCACCTCTCTCCCCGACGGGGCGGCTGGCCGGGCGGGGGGGCTGACCCCCCCCACCCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCCCCACCTCCCCTCCCGGAGGGGGCGGCTGGCCGGGCAGAGGGGCTCCTCACTTCCCAGTAGGGGTGGCCGGGCAGAGGCGCCCCTCACCTCCCGGATGGGGGCGGCTGGCTGGGGCGGGGGGCTGACCCCCCCACCTCCTTCCCGGATGGGGCGGCTGGCTGGGGCGGGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGCCAGGCGGGGGGCTGACCCCCCACACCCTCCCTCCCGGACGGGGCGGCTGGCCGGGCAGAGGGGGCTCCTCACTTTCCAGTAAGGGGCGGCCGGGCAGAGGCGCCCCTCACCTCCCGGACGGGCGGCTGGCCGGGCG 3 PASS PRECISE;SVTYPE=INS;SVLEN=462;SUPPORT=3;COVERAGE=6,5,5,5,6;STRAND=+-;AF=0.6;STDEV_LEN=6.351;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=386.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:3,3:6:1,2,1,2:6 -chr18 57642330 chr18-57642331-DEL-106 GTTCCTTCCGGTGGGTTCGTGGTCTCGCTAGCTTCAGGAGTGAAGCTTCAGACCTTCACGGTGAGTGTTACAGCCGTTAAGGTGGCGCGTGTGGAGTTGTTCGTTCC G 4 . ID=chr18-57642331-DEL-106;SVTYPE=DEL;SVLEN=-106;TIG_REGION=h1tg015034l:17162-17162;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=387.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:5,3:8:4:3:18:3,2,0,3:7 +chr18 57642330 chr18-57642331-DEL-106 GTTCCTTCCGGTGGGTTCGTGGTCTCGCTAGCTTCAGGAGTGAAGCTTCAGACCTTCACGGTGAGTGTTACAGCCGTTAAGGTGGCGCGTGTGGAGTTGTTCGTTCC G 4 . ID=chr18-57642331-DEL-106;SVTYPE=DEL;SVLEN=-106;TIG_REGION=h1tg015034l:17162-17162;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=387.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:5,3:8:4:3:18:3,2,0,3:7 chr18 57643072 pbsv.INS.904 T TGCTGATTGGTCCATTTTACAGAGA 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,2:8:3,3,0,2:4 chr18 57649502 pbsv.INS.905 A ATATCTATCTATCTATCTATC 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,1,4:4 chr18 57678680 chr18-57678681-DEL-324;pbsv.DEL.906 TCCCAGCCAATGCAGCAGGCTGACCTTTTGTCCTGGCTAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAAAATTAGCCAGGCATGGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCATAAACCCGGGAGGCAGAGGTTGCAGTGAACCGAGATCACACCATTGCACTCCAGCCCAGGCGATAGTTCGAGATTCTATCTCAAAAAAAAAAAAAAAGAAGAGAAAAGAAAAGAGTGTGGTGTTGATGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAATTGACCCGACTTCAATTC T 4 PASS ID=chr18-57678681-DEL-324;SVTYPE=DEL;SVLEN=-324;TIG_REGION=h2tg004927l:205789-205789;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 0/1:5,1:6:3,2,1,0:5 @@ -1213,18 +1213,18 @@ chr18 58003890 chr18-58003891-DEL-306;pbsv.DEL.916 ACAAACATTATTATTTTTTTTTTTTTGAG chr18 58005320 chr18-58005321-INS-50 A AAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT 4 . ID=chr18-58005321-INS-50;SVTYPE=INS;SVLEN=50;TIG_REGION=h2tg003362l:282874-282923;QUERY_STRAND=-;HOM_REF=0,24;HOM_TIG=0,24;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=393.0 GT:DR:DV:GQ:SUPP 0/1:4:3:18:3 chr18 58005344 pbsv.INS.917 A ATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA 2 PASS SVTYPE=INS;SVLEN=40;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,5,2:4 chr18 58063949 pbsv.DEL.918 CTTTTTTTTTTTTTTTTTTTTTTT C 2 PASS SVTYPE=DEL;SVLEN=-23;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,4,3:4 -chr18 58134345 chr18-58134346-DEL-326;pbsv.DEL.919 AGCAATTCCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC A 4 PASS ID=chr18-58134346-DEL-326;SVTYPE=DEL;SVLEN=-326;TIG_REGION=h2tg003362l:153903-153903;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=394.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:9:25:7 +chr18 58134345 chr18-58134346-DEL-326;pbsv.DEL.919 AGCAATTCCATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC A 4 PASS ID=chr18-58134346-DEL-326;SVTYPE=DEL;SVLEN=-326;TIG_REGION=h2tg003362l:153903-153903;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=394.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:9:25:7 chr18 58151625 pbsv.INS.920 A ATGTGTGTGTGTGTGTGTGTG 2 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,7:10:1,2,3,4:4 chr18 58171265 pbsv.DEL.921 AACACTGCTGCCCGCCTCATCACCCCAGCCCAAGAGGACAGAACACTGCTGCCCGCCTCATCACCCCAGCCCAAGAGGACAGAACACTGCTGCCCGCCTCATCACCCCAGCCCAAGGGGACAGG A 2 PASS SVTYPE=DEL;SVLEN=-123;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:2,2,1,0:4 chr18 58171306 chr18-58171307-DEL-82;pbsv.DEL.922 AACACTGCTGCCCGCCTCATCACCCCAGCCCAAGAGGACAGAACACTGCTGCCCGCCTCATCACCCCAGCCCAAGGGGACAGG A 4 PASS ID=chr18-58171307-DEL-82;SVTYPE=DEL;SVLEN=-82;TIG_REGION=h1tg015527l:4221-4221,h2tg003362l:117253-117253;QUERY_STRAND=+,-;HOM_REF=0,53;HOM_TIG=0,53;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=395.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 -chr18 58209259 chr18-58209260-INS-826 C CCACTACTTCCTCCTCCTCCCCCTCCTCCCCCTCCTCCTCCACCTCCTCCTCGTCCTCCACCTCCATCTCCTCTCCATCCTCCTCCTCCACCTCCACCTCCTCCTCCCTCTCCTCCTCCCTCTCCTCCTCCTCCCCCTCCTCCTCGTCCTCTACCTCCTCCTCCTCCACCACCTCCATCTGCTCCTCCTCCTCCCCCTCCACCTCCCCCTCCCCCTCCTCCTCCCTCTCCTCCTCCCCCTCCACCTCCACCTCTTCCTCCCCGCCTCCTCCCCCACCCCCTCCTTCTCAACCTCCGCCTCCCCTTCCTCCTCATCATCCTCCACCTCCACCTCCCCCTGTTCCTCCTCCTCCTCCTCCACCTCCACCCCCTCCTCCTCATCCTCCACCCCCTCCTCCTCCTCCACCTCCACCTCCACCTCCTCATCCTGCACCTCCACGTCCTCCTCCCCCCTCCACCTCCTCCTCCACCTGCACCTCCTCAACCTCCTCCTCCCCCTCCACCTCCCCCTCCTCCCCCTCCTCCTTAACCTCCCGCCTCCACCTCCTCCTCCTCATCCTCCACTTCCACCTCCTCCTCCCCCTGGTCCTTCCCCTCCTCCTCCTCCACCTCCTCCTCCTCATCCTCCACCCCCTCCTCCTCATCCTCCACCCCCCTCCTCCTCCACTTCTGCCTCCACCTCCTCCTCCTCATCCTGCACTTCCGCCTCCTCCTCCCCCTCCCCCTCCTCCACCTCCACCTCCTCCTCCTCATCCTCCACCTGCTCCTCCTCATCCTCCACCTCCACCTCCTCCTCCTCCACCTCCTCCTTCTCCACCTCCACATCCT 4 . ID=chr18-58209260-INS-826;SVTYPE=INS;SVLEN=826;TIG_REGION=h2tg003362l:78547-79372;QUERY_STRAND=-;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=396.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,3:3:.:3:8:0,0,2,1:7 +chr18 58209259 chr18-58209260-INS-826 C CCACTACTTCCTCCTCCTCCCCCTCCTCCCCCTCCTCCTCCACCTCCTCCTCGTCCTCCACCTCCATCTCCTCTCCATCCTCCTCCTCCACCTCCACCTCCTCCTCCCTCTCCTCCTCCCTCTCCTCCTCCTCCCCCTCCTCCTCGTCCTCTACCTCCTCCTCCTCCACCACCTCCATCTGCTCCTCCTCCTCCCCCTCCACCTCCCCCTCCCCCTCCTCCTCCCTCTCCTCCTCCCCCTCCACCTCCACCTCTTCCTCCCCGCCTCCTCCCCCACCCCCTCCTTCTCAACCTCCGCCTCCCCTTCCTCCTCATCATCCTCCACCTCCACCTCCCCCTGTTCCTCCTCCTCCTCCTCCACCTCCACCCCCTCCTCCTCATCCTCCACCCCCTCCTCCTCCTCCACCTCCACCTCCACCTCCTCATCCTGCACCTCCACGTCCTCCTCCCCCCTCCACCTCCTCCTCCACCTGCACCTCCTCAACCTCCTCCTCCCCCTCCACCTCCCCCTCCTCCCCCTCCTCCTTAACCTCCCGCCTCCACCTCCTCCTCCTCATCCTCCACTTCCACCTCCTCCTCCCCCTGGTCCTTCCCCTCCTCCTCCTCCACCTCCTCCTCCTCATCCTCCACCCCCTCCTCCTCATCCTCCACCCCCCTCCTCCTCCACTTCTGCCTCCACCTCCTCCTCCTCATCCTGCACTTCCGCCTCCTCCTCCCCCTCCCCCTCCTCCACCTCCACCTCCTCCTCCTCATCCTCCACCTGCTCCTCCTCATCCTCCACCTCCACCTCCTCCTCCTCCACCTCCTCCTTCTCCACCTCCACATCCT 4 . ID=chr18-58209260-INS-826;SVTYPE=INS;SVLEN=826;TIG_REGION=h2tg003362l:78547-79372;QUERY_STRAND=-;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=396.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,3:3:.:3:8:0,0,2,1:7 chr18 58278402 chr18-58278403-DEL-76 TCAGAGGAGTTTCCTACCTGGTTAGACACTTAACCACCTCCAGACGGACCCCTTCTAATCCACGTCCCACATTATAG T 4 . ID=chr18-58278403-DEL-76;SVTYPE=DEL;SVLEN=-76;TIG_REGION=h1tg011543l:56259-56259;QUERY_STRAND=-;HOM_REF=0,1;HOM_TIG=0,1;AC=1 GT:SUPP 1/0:1 -chr18 58282123 chr18-58282124-INS-308 T TAAAAGTCAGGTTGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTTGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA 4 . ID=chr18-58282124-INS-308;SVTYPE=INS;SVLEN=308;TIG_REGION=h1tg011543l:52335-52642;QUERY_STRAND=-;HOM_REF=0,13;HOM_TIG=0,13;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=398.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,2:4:2:2:14:2,0,0,2:7 +chr18 58282123 chr18-58282124-INS-308 T TAAAAGTCAGGTTGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTTGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAA 4 . ID=chr18-58282124-INS-308;SVTYPE=INS;SVLEN=308;TIG_REGION=h1tg011543l:52335-52642;QUERY_STRAND=-;HOM_REF=0,13;HOM_TIG=0,13;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=398.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:2,2:4:2:2:14:2,0,0,2:7 chr18 58316949 pbsv.DEL.925 TTACTTTATTTACTTTATTTAAAGCTAT T 2 PASS SVTYPE=DEL;SVLEN=-27;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,3:10:3,4,3,0:4 chr18 58369427 pbsv.DEL.926 AGATGGGAATGTCCCTGTCGGCAGGGCTCATTCTGCACATCTGTCC A 2 PASS SVTYPE=DEL;SVLEN=-45;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,4:9:3,2,3,1:4 chr18 58420207 pbsv.INS.927 A AATGGATGGATGGATGCATGGATGA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,4:11:5,2,3,1:4 -chr18 58445066 chr18-58445067-DEL-57;pbsv.DEL.928 AAGACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG A 4 PASS ID=chr18-58445067-DEL-57;SVTYPE=DEL;SVLEN=-57;TIG_REGION=h1tg005929l:10405-10405;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=399.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:2:11:7 -chr18 58460174 chr18-58460175-DEL-71;pbsv.DEL.929 CTTTTGTGTCTAGCTCAGGGTTTGTAAATATACCAATCAGCACTCTGTATCTAGCTAATCTAGTGGAGAACT C 4 PASS ID=chr18-58460175-DEL-71;SVTYPE=DEL;SVLEN=-71;TIG_REGION=h1tg005929l:25421-25421;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=400.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:2:14:7 +chr18 58445066 chr18-58445067-DEL-57;pbsv.DEL.928 AAGACGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG A 4 PASS ID=chr18-58445067-DEL-57;SVTYPE=DEL;SVLEN=-57;TIG_REGION=h1tg005929l:10405-10405;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=399.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:3:2:11:7 +chr18 58460174 chr18-58460175-DEL-71;pbsv.DEL.929 CTTTTGTGTCTAGCTCAGGGTTTGTAAATATACCAATCAGCACTCTGTATCTAGCTAATCTAGTGGAGAACT C 4 PASS ID=chr18-58460175-DEL-71;SVTYPE=DEL;SVLEN=-71;TIG_REGION=h1tg005929l:25421-25421;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=400.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:2:14:7 chr18 58467015 chr18-58467016-INS-52 T TCTGTACAAGGTGAGGGAAATGACAACTCACAACATGGGGAGAAAGTAACGAC 4 . ID=chr18-58467016-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h2tg002730l:20836-20887;QUERY_STRAND=-;HOM_REF=0,54;HOM_TIG=0,54;AC=1 GT:SUPP 0/1:1 chr18 58479079 pbsv.DEL.930 TATGTATATATATATATATATATAC T 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:2,2,2,1:4 chr18 58547009 pbsv.DEL.931 ATGGAAAAATGATTTGAGTCTCAGAAAACTGGGGTT A 2 PASS SVTYPE=DEL;SVLEN=-35;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,16:16:0,0,8,8:4 @@ -1232,14 +1232,14 @@ chr18 58550503 chr18-58550504-INS-404;pbsv.INS.932 T TATACAACCCCATCCCCATCTCTATCA chr18 58573551 pbsv.INS.933 C CTGTATATATGTGTATATATTTT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 chr18 58578738 pbsv.INS.934 A ACACACGCGCGCACGCGCGCG 2 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,5,6:4 chr18 58645568 pbsv.INS.935 T TCCCCCCCCCCCCCCCCCCCCCCCCCC 2 PASS SVTYPE=INS;SVLEN=26;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:3,5,0,1:4 -chr18 58755647 chr18-58755648-INS-56 A ACTCAGCTCGCAGACTTGCCTTGGAGCCATTCTAGCTGTGTAAGCTGACTTCACACT 4 . ID=chr18-58755648-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h1tg008713l:14252-14307;QUERY_STRAND=+;HOM_REF=0,55;HOM_TIG=0,55;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=403.0 GT:DR:DV:GQ:SUPP 0/1:5:4:26:3 +chr18 58755647 chr18-58755648-INS-56 A ACTCAGCTCGCAGACTTGCCTTGGAGCCATTCTAGCTGTGTAAGCTGACTTCACACT 4 . ID=chr18-58755648-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h1tg008713l:14252-14307;QUERY_STRAND=+;HOM_REF=0,55;HOM_TIG=0,55;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=403.0 GT:DR:DV:GQ:SUPP 1/0:5:4:26:3 chr18 58755648 pbsv.INS.DUP.936 C CTCAGCTCGCAGACTTGCCTTGGAGCCATTCTAGCTGTGTAAGCTGACTTCACA 0 PASS SVTYPE=INS;SVLEN=53;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,4:10:4,2,4,0:4 chr18 58863530 chr18-58863531-INS-157 C CCCGCACCCCCAGCCGTAGGCCCCGGCGTGGCGGGCCGGCCGCCGCCGCCGCCGCGCGGCCTAGAGCGCGGTGCCCGGGGAGGCGCGGGGCCCGGGCCGGGCGCTGGCGAGGCCCGGCGGCGGCGGCGGCGGCGGCCGGGGAGCCCGGGAGGCGGCGG 4 . ID=chr18-58863531-INS-157;SVTYPE=INS;SVLEN=157;TIG_REGION=h1tg014939l:18384-18540,h2tg014424l:18384-18540;QUERY_STRAND=+,+;HOM_REF=0,1;HOM_TIG=0,1;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=404.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,10:10:.:10:27:0,0,6,4:7 chr18 58888777 pbsv.DEL.938 ATATATATAAAATATATATAATT A 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,4:9:3,2,2,2:4 chr18 58888869 Sniffles2.INS.11AS11 A TAAAATATATATATTATATATATAAAATATATATATAAAATATATATATTATATATATAAAATATAT 3 PASS PRECISE;SVTYPE=INS;SVLEN=67;SUPPORT=5;COVERAGE=9,9,9,9,9;STRAND=+-;AF=0.556;STDEV_LEN=16.197;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:26:4:5:2 -chr18 58888876 chr18-58888877-INS-100 T TATATAATATATATAATATATATATAAAATATATATATTATATATATAAAATATATATATAAAATATATATATTATATATATAAAATATATATATATATTA 4 . ID=chr18-58888877-INS-100;SVTYPE=INS;SVLEN=100;TIG_REGION=h1tg014087l:41076-41175;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=405.0 GT:AD:DP:SAC:SUPP 0/1:4,5:9:2,2,3,2:5 +chr18 58888876 chr18-58888877-INS-100 T TATATAATATATATAATATATATATAAAATATATATATTATATATATAAAATATATATATAAAATATATATATTATATATATAAAATATATATATATATTA 4 . ID=chr18-58888877-INS-100;SVTYPE=INS;SVLEN=100;TIG_REGION=h1tg014087l:41076-41175;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=405.0 GT:AD:DP:SAC:SUPP 1/0:4,5:9:2,2,3,2:5 chr18 58935124 Sniffles2.INS.11BS11 C CCCCACTCCTCCTCCTCCCCCCCACTCCTCCTCCTCCCCACTCTCCTCCTCCCCACTCCTCCTCCCTCCTCCCCCTCCTCCCTCCTCCCCCCTACTCCTCCTCCT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=96;SUPPORT=6;COVERAGE=6,6,6,6,6;STRAND=+-;AF=1;STDEV_LEN=8.77;STDEV_POS=35.79;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:16:0:6:2 -chr18 58935177 chr18-58935178-INS-96 C CTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCTT 4 . ID=chr18-58935178-INS-96;SVTYPE=INS;SVLEN=96;TIG_REGION=h2tg017232l:11894-11989;QUERY_STRAND=+;HOM_REF=0,14;HOM_TIG=0,14;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=406.0 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,2,4:5 +chr18 58935177 chr18-58935178-INS-96 C CTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCACTCCTCCTCCTCCCCTT 4 . ID=chr18-58935178-INS-96;SVTYPE=INS;SVLEN=96;TIG_REGION=h2tg017232l:11894-11989;QUERY_STRAND=+;HOM_REF=0,14;HOM_TIG=0,14;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=406.0 GT:AD:DP:SAC:SUPP 0/1:0,6:6:0,0,2,4:5 chr18 58988445 pbsv.DEL.941 TATAAAATATATAATACATAC T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,2:8:2,4,1,1:4 chr18 59038808 pbsv.INS.942 T TTAAGTCATATCATAACTCGTGATGTGGTAGCTGACATTTG 2 PASS SVTYPE=INS;SVLEN=40;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:1,2,3,2:4 chr18 59081315 chr18-59081316-INS-92 C CTCCCTCCCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT 4 . ID=chr18-59081316-INS-92;SVTYPE=INS;SVLEN=92;TIG_REGION=h2tg016745l:63490-63581;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1 GT:SUPP 0/1:1 @@ -1258,7 +1258,7 @@ chr18 59370512 pbsv.DEL.951 TTGCAGAGTATCTGCTGCTTCTTGCAGAGT T 2 PASS SVTYPE=DEL;S chr18 59473794 Sniffles2.INS.11ES11 T CCTTCCAACCTTCCCACTTTTCCTCCCCACTACTCATCATCCAACCCTCCCACTATTTCCTCCCCTGCTACTCACCTTCCAACCCTATTTCCCTCCCCCACTACTCACCTTCCAACCCTATTTCCTCCCCCACTACTCACCTTCCAACCCTCCCACTATTCCCTCCCCCCACTACTCACCTTCCAACCTTCCCACTATTTCCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCCCCCGACTACTCACCTTCCAACCTTCCCACTATTTCCTCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCCCACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCCCCACTACTCACCTTCCAACCTTCCCACTATTTCCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCCCCCGACTACTCACCATCCAACCCTTCACTATTTCCCCCCCCACTACTCACCATCCAACCCTCCCACTATGTCCTCTCCCACTACTCACCTTCCAACCCTCCTATTCCCCCCACTACTACTCACCATCCAACCCTCCCAGTACTCACCTTCCAACCCTCCCACTATCCCCCCTACTACTCACCTTCCAACCCTTCCACTATTTCCCCACTACTACTCACCTTCCAACCCTCCCACTATTTCCTCCTCCAACTACTCACCTTCCAACCCTCCTACTATTCCCCCGCTACTACTCACCTTCCAACCCTCCCACTATTCCCCCACTACTGCCCACCTTCCAACCCTCCCACTATTCCCCCGCTACTACCTACCTTCCACCCTCCCACTATTTCCTCCCACCAC 3 PASS PRECISE;SVTYPE=INS;SVLEN=829;SUPPORT=7;COVERAGE=8,7,7,7,11;STRAND=+-;AF=1;STDEV_LEN=2.345;STDEV_POS=6.708;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=409.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:1,7:8:1,0,4,3:6 chr18 59473808 chr18-59473809-INS-725 C CACTATTTCCTCCCCTGCTACTCACCTTCCAACCCTATTTCCTCCCCCACTACTCACCTTCCAACCCTATTTCCTCCCCCACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCCCCACTACTCACCTTCCAACCTTCCCACTATTTCCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCCCCCGACTACTCACCTTCCAACCTTCCCACTATTTCCTCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCCCACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCCCCACTACTCACCTTCCAACCTTCCCACTATTTCCCCCCTACTACTCACCTTCCAACCCTCCCACTATTTCCCCCCGACTACTCACCATCCAACCCTTCCACTATTTCCCCCCCACTACTCACCATCCAACCCTCCCAGTACTCACCTTCCAACCCTCCCACTATTCCCCCCTACTACTCACCTTCCAACCCTTCCACTATTTCCCCACTACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCTCCAACTACTCACCTTCCAACCCTCCTACTATTCCCCCGCTACTACTCACCTTCCAACCCTCCCACTATTCCCCCACTACTGCCCACCTTCCAACCCTCCCACTATTCCCCCGCTACTACCTATCTTCCAACCCTCCCACTATTTCCTCCCACCACTCACCTTCCAACCCTCCT 4 . ID=chr18-59473809-INS-725;SVTYPE=INS;SVLEN=725;TIG_REGION=h1tg003784l:73293-74017,h2tg003625l:73293-74017;QUERY_STRAND=-,-;HOM_REF=0,6;HOM_TIG=0,6;AC=2 GT:SUPP 1/1:1 chr18 59473815 Sniffles2.INS.11DS11 C CCCCCCTACTACTCACCTTCCAACCCTTCCACTATTTCCCCACTACTACTCACCTTCCAACCCTCCCACTATTTCCTCCCTCCAACTACTCACCTTCCAACCCTCCTACTATTCCCCCGCTACTACTCACCTTCCAACCCTCCCACTATTCCCCCACTACTGCCCACCTTCCAACCCTCCCACTATTCCCCCGCTACTACCTACCTTCCAACCCTCCCACTATTTTCCTCCCACCACTCACCTTCCAACCCTCCTACTATTC 3 PASS PRECISE;SVTYPE=INS;SVLEN=262;SUPPORT=2;COVERAGE=8,7,7,9,12;STRAND=-;AF=0.286;STDEV_LEN=2.121;STDEV_POS=4.243;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:6:5:2:2 -chr18 59482875 chr18-59482876-INS-314;pbsv.INS.953 T TAAATTACCGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 4 PASS ID=chr18-59482876-INS-314;SVTYPE=INS;SVLEN=314;TIG_REGION=h1tg003784l:63913-64226,h2tg003625l:63913-64226;QUERY_STRAND=-,-;HOM_REF=0,14;HOM_TIG=0,14;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=410.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:5:36:7 +chr18 59482875 chr18-59482876-INS-314;pbsv.INS.953 T TAAATTACCGTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 4 PASS ID=chr18-59482876-INS-314;SVTYPE=INS;SVLEN=314;TIG_REGION=h1tg003784l:63913-64226,h2tg003625l:63913-64226;QUERY_STRAND=-,-;HOM_REF=0,14;HOM_TIG=0,14;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=410.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:5:5:36:7 chr18 59542283 pbsv.INS.954 T TGTCTTCTACATGCTAGTATTA 2 PASS SVTYPE=INS;SVLEN=21;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,6,1:4 chr18 59573284 pbsv.INS.955 A AATATATATATATATATATATATATATATATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=46;AC=2 GT:AD:DP:SAC:SUPP 1/1:2,8:10:1,1,5,3:4 chr18 59658348 pbsv.DEL.956 AAAAAAAATATATATATATATAT A 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,8:9:1,0,2,6:4 @@ -1277,10 +1277,10 @@ chr18 60637450 pbsv.DEL.967 GTGTGTGTGTGTGTGTGTATA G 2 PASS SVTYPE=DEL;SVLEN=-20; chr18 60661362 pbsv.INS.DUP.968 A AGCTTATTTTATTTCTCCA 0 PASS SVTYPE=INS;SVLEN=18;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:1,0,3,1:4 chr18 60808772 pbsv.DEL.969 TTATATATATATATATATATATA T 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,6:9:1,2,4,2:4 chr18 61006046 pbsv.INS.970 A AAAAAAAAAAAAAAAAAAAAA 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,2,3:4 -chr18 61023451 chr18-61023452-DEL-304;pbsv.DEL.971 ATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATGTTGTATGTATATACATATATGTATATATGTTGTATGTATATACATATATG A 4 PASS ID=chr18-61023452-DEL-304;SVTYPE=DEL;SVLEN=-304;TIG_REGION=h1tg018498l:145044-145044;QUERY_STRAND=-;HOM_REF=0,35;HOM_TIG=0,35;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=414.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:5:26:7 +chr18 61023451 chr18-61023452-DEL-304;pbsv.DEL.971 ATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATATGTTGTATGTATATACATATATGTATATATGTTGTATGTATATACATATATGTATATATGTTGTATGTATATACATATATG A 4 PASS ID=chr18-61023452-DEL-304;SVTYPE=DEL;SVLEN=-304;TIG_REGION=h1tg018498l:145044-145044;QUERY_STRAND=-;HOM_REF=0,35;HOM_TIG=0,35;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=414.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:5:26:7 chr18 61023637 chr18-61023638-INS-277 A ATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATG 4 . ID=chr18-61023638-INS-277;SVTYPE=INS;SVLEN=277;TIG_REGION=h2tg016311l:73535-73811;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,67;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=414.1 GT:AD:DP:SAC:SUPP 0/1:5,4:9:1,4,3,1:5 chr18 61023698 Sniffles2.INS.123S11 T TATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATATGTTGTATGCATATACATATATGTATATATGTTGTATGCATATACATATATGTA 3 PASS PRECISE;SVTYPE=INS;SVLEN=250;SUPPORT=4;COVERAGE=9,9,9,9,9;STRAND=+-;AF=0.444;STDEV_LEN=1.414;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:26:5:4:2 -chr18 61107747 chr18-61107748-INS-340 T TAAAAAGACAACTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAACACACACACACACAAAAAAAAAAAAAAAAA 4 . ID=chr18-61107748-INS-340;SVTYPE=INS;SVLEN=340;TIG_REGION=h1tg018498l:60746-61085;QUERY_STRAND=-;HOM_REF=0,16;HOM_TIG=0,16;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=415.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,3:5:2:3:11:1,1,2,1:7 +chr18 61107747 chr18-61107748-INS-340 T TAAAAAGACAACTATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAACACACACACACACAAAAAAAAAAAAAAAAA 4 . ID=chr18-61107748-INS-340;SVTYPE=INS;SVLEN=340;TIG_REGION=h1tg018498l:60746-61085;QUERY_STRAND=-;HOM_REF=0,16;HOM_TIG=0,16;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=415.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:2,3:5:2:3:11:1,1,2,1:7 chr18 61117251 pbsv.DEL.974 CATAAAGGCTGTGGACTTTACT C 2 PASS SVTYPE=DEL;SVLEN=-21;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,7:10:1,2,3,4:4 chr18 61119851 pbsv.DEL.975 TTGTTATTAACCATAGTCACTATGTTGTACAATAGC T 2 PASS SVTYPE=DEL;SVLEN=-35;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,7:11:1,3,2,5:4 chr18 61137700 chr18-61137701-DEL-94 CATTCTGTTAGCGGTTTATTTCACTTAGCATGATATCCTCAAAGTTCATCCATGTTGTGGCAAATGGCAGAATGTCCTTTTTGGAGGCTGAATAA C 4 . ID=chr18-61137701-DEL-94;SVTYPE=DEL;SVLEN=-94;TIG_REGION=h1tg018498l:30720-30720;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 @@ -1308,7 +1308,7 @@ chr18 61970402 pbsv.INS.993 A ATATTATACAATAATATAATATATATGTTATACAATAATATATTATACAA chr18 61970438 chr18-61970439-INS-194 T TATTACACAATAATATAATATATTATACAATAATATAATATATTATACAATAATATAATATATAATATATTATATATTATACAATAATATATAATATAATATATAATATATTATATATTATACAATAATATATAATATATTATACAATAATATAATACATATTACACAATAATATAATATACAATATATTATACA 4 . ID=chr18-61970439-INS-194;SVTYPE=INS;SVLEN=194;TIG_REGION=h2tg009120l:83700-83893;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1 GT:SUPP 0/1:1 chr18 61970493 Sniffles2.INS.12AS11 A ATATATTATACAATAATATATAATATAATATATAATATATTATATATTATACAATAATATATATATATTATACAATAATATAATACATATTACACAATAATATAATATACAATATATTATACAATAATATAATATACA 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=138;SUPPORT=2;COVERAGE=5,5,5,5,5;STRAND=-;AF=0.4;STDEV_LEN=19.092;STDEV_POS=12.021;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:11:3:2:2 chr18 61970496 Sniffles2.INS.12BS11 A TAATAATAATATAATATATTATATATTATACAATAATATATAATATATTATACAATAATATAATACATATTACACAATAATATAATATACAATATATTATACAATAATATAATATACAATATATTATACAATAATATAATATATTACATATTATACAATAATATAATATATTACATATTATACAATAATATAATATATTACATATTATACATATAATAT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=213;SUPPORT=3;COVERAGE=5,5,5,5,5;STRAND=-;AF=0.6;STDEV_LEN=17.578;STDEV_POS=18.475;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:11:2:3:2 -chr18 61970733 chr18-61970734-INS-149 A ATAATATATTATATATTATACAATAATATAATATATTATATTATACAATAATATAATATATTATATTATACAATAATATAATATATTATATTATACAATAATATAATATATTATATTATACAATAATATAATATATATATATTATACAAT 4 . ID=chr18-61970734-INS-149;SVTYPE=INS;SVLEN=149;TIG_REGION=h2tg009120l:84191-84339;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=422.1 GT:DR:DV:GQ:SUPP 1/1:.:5:13:3 +chr18 61970733 chr18-61970734-INS-149 A ATAATATATTATATATTATACAATAATATAATATATTATATTATACAATAATATAATATATTATATTATACAATAATATAATATATTATATTATACAATAATATAATATATTATATTATACAATAATATAATATATATATATTATACAAT 4 . ID=chr18-61970734-INS-149;SVTYPE=INS;SVLEN=149;TIG_REGION=h2tg009120l:84191-84339;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=422.1 GT:DR:DV:GQ:SUPP 0/1:.:5:13:3 chr18 61971050 pbsv.INS.994 C CATAATATATTATATATTATACTAT 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:1,0,0,4:4 chr18 61971091 pbsv.DEL.995 CAATATATACAATATTATACAATTATACAATAATATAATATATTATATATTATG C 2 PASS SVTYPE=DEL;SVLEN=-53;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:0,3,0,2:4 chr18 62039557 pbsv.DEL.996 GGTGCCGCACCCCATGTTTAGGGTCCATCCAGGGTGCCGCACCCCATGTTTAGGGCCCCATCCAGAGTGCCGCACCCCATGATTAGGGCCCATTCAGGGTGCCGCACCCCATGTTTAGGGCCCATCCAGGGTGCCGCACCCCATGTTTAGGGCCCCATCCAGGGTGCCGCACATCATGTTTAGGGCCCCATCCAGGGTGCCGCACCCCATGTTTAGGGCCCATCCAGA G 2 PASS SVTYPE=DEL;SVLEN=-227;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=423.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:2:5:6 @@ -1320,8 +1320,8 @@ chr18 62355583 pbsv.INS.DUP.1001 A AAATCTTAATTTTTAAATATTTACTTTGACTGAGGGTTA 0 PAS chr18 62394018 pbsv.DEL.1002 CCACACACACACGCACACACACACACGCA C 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,15:15:0,0,7,8:4 chr18 62460857 pbsv.INS.1003 G GTAAATCATTCTGATGGAGATTATTTGGTCTATGTTATTTTTGTCTTTTTATTTTGTT 2 PASS SVTYPE=INS;SVLEN=57;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:5,2,0,1:4 chr18 62567944 pbsv.INS.1004 C CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2 PASS SVTYPE=INS;SVLEN=33;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,6,4:4 -chr18 62580506 chr18-62580507-DEL-132 TGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGAC T 4 . ID=chr18-62580507-DEL-132;SVTYPE=DEL;SVLEN=-132;TIG_REGION=h1tg001261l:540075-540075;QUERY_STRAND=+;HOM_REF=0,54;HOM_TIG=0,38;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=427.0 GT:DR:DV:GQ:SUPP 0/1:2:7:.:3 -chr18 62581102 chr18-62581103-DEL-572 CAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCCGAGATGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCTGAGATGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGTGCTGTGGAAGGCG C 4 . ID=chr18-62581103-DEL-572;SVTYPE=DEL;SVLEN=-572;TIG_REGION=h1tg001261l:540539-540539;QUERY_STRAND=+;HOM_REF=0,19;HOM_TIG=0,7;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=427.1 GT:DR:DV:GQ:SUPP 1/1:.:9:25:3 +chr18 62580506 chr18-62580507-DEL-132 TGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGAC T 4 . ID=chr18-62580507-DEL-132;SVTYPE=DEL;SVLEN=-132;TIG_REGION=h1tg001261l:540075-540075;QUERY_STRAND=+;HOM_REF=0,54;HOM_TIG=0,38;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=427.0 GT:DR:DV:GQ:SUPP 1/0:2:7:.:3 +chr18 62581102 chr18-62581103-DEL-572 CAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCCGAGATGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCTGAGATGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGTGCTGTGGAAGGCG C 4 . ID=chr18-62581103-DEL-572;SVTYPE=DEL;SVLEN=-572;TIG_REGION=h1tg001261l:540539-540539;QUERY_STRAND=+;HOM_REF=0,19;HOM_TIG=0,7;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=427.1 GT:DR:DV:GQ:SUPP 1/0:.:9:25:3 chr18 62581115 pbsv.DEL.1005 CCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGTGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGACGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCCGAGATGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCTGAGATGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGTGCTGTGGAAGGCGAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCCAGGTGGACCCCTCCCGAGATGGTGTCACAGCGCTGTGGAAGGCGAGGTGGACCCCTC C 2 PASS SVTYPE=DEL;SVLEN=-704;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,2,7:4 chr18 62641278 chr18-62641279-INS-56 A ATTTACTCTTCTTTTCTAGTTTCTAAGATGGAAGCCTACATTAGCAACTTGAGACCT 4 . ID=chr18-62641279-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h1tg001261l:600106-600161;QUERY_STRAND=+;HOM_REF=0,58;HOM_TIG=0,58;AC=1 GT:SUPP 1/0:1 chr18 62642126 chr18-62642127-DEL-56 ATGGCAAAAGGGACTTCGCAGATGTGATAAAGTTAAGGTGGGAAGATTATTCTGGAT A 4 . ID=chr18-62642127-DEL-56;SVTYPE=DEL;SVLEN=-56;TIG_REGION=h1tg001261l:601008-601008;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 @@ -1332,7 +1332,7 @@ chr18 62849825 pbsv.INS.1009 A ATATATATATATATATATATATATATATA 2 PASS SVTYPE=INS;S chr18 62900301 pbsv.DEL.1010 TAATAAATAAATAAATAAATA T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:1,2,1,2:4 chr18 63063697 pbsv.DEL.1011 CTTTTTTTTTTTTTTTTTTTT C 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 chr18 63087025 pbsv.INS.1012 A ATTCCTTTCTTTCTTTCTTCT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,3,1:4 -chr18 63091750 chr18-63091751-INS-310 T TGTGGTGTGTGTGGTGTGTGTAGTGTGTGTATTTGTGTGTGGTATGTAGTGTGTGAGTGGATGTTGTGTGTGTGGTGTGCGTGGTGTGTGTGAGAGCGTGGTGTGGTGTGGTAGTGTGTGCATTTGTGAGTGTGGTGTGTGAGTCTGGTGTGTGTAGTGTATTTGTGGGTGTGGTATGTAGTATGTGAGTGGGTGTAGTGTGTGTGGTGTGTGTAGTGTGTGTGAATGGGTGTGGTGTGTGTGAGTGTGGTGTGGTATGTAGTGTGTGAGTGGGTGTGGTGTGTGGTGTGTGTAGTGTGTGTGAGTGTGGC 4 . ID=chr18-63091751-INS-310;SVTYPE=INS;SVLEN=310;TIG_REGION=h1tg002470l:182327-182636;QUERY_STRAND=+;HOM_REF=0,109;HOM_TIG=0,109;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=430.0 GT:AD:DP:SAC:SUPP 0/1:1,2:3:0,1,2,0:5 +chr18 63091750 chr18-63091751-INS-310 T TGTGGTGTGTGTGGTGTGTGTAGTGTGTGTATTTGTGTGTGGTATGTAGTGTGTGAGTGGATGTTGTGTGTGTGGTGTGCGTGGTGTGTGTGAGAGCGTGGTGTGGTGTGGTAGTGTGTGCATTTGTGAGTGTGGTGTGTGAGTCTGGTGTGTGTAGTGTATTTGTGGGTGTGGTATGTAGTATGTGAGTGGGTGTAGTGTGTGTGGTGTGTGTAGTGTGTGTGAATGGGTGTGGTGTGTGTGAGTGTGGTGTGGTATGTAGTGTGTGAGTGGGTGTGGTGTGTGGTGTGTGTAGTGTGTGTGAGTGTGGC 4 . ID=chr18-63091751-INS-310;SVTYPE=INS;SVLEN=310;TIG_REGION=h1tg002470l:182327-182636;QUERY_STRAND=+;HOM_REF=0,109;HOM_TIG=0,109;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=430.0 GT:AD:DP:SAC:SUPP 1/0:1,2:3:0,1,2,0:5 chr18 63103446 chr18-63103447-INS-321;pbsv.INS.1014 A ATGTGTGTGTGTGTGTGTGGTGTGGTATGTATGTGGTGTGATGTTTGGTGTCAGGTGTAGAAGGTGTGGTGTCTGTGTGTGTGTGGTGTGTATGGTGTGTTGTGGTGTGGTGTGGTGTGTGTGGTGTGTGTCTGTGGTGCACTGTGGTGGGTGATGTGTGTGTGGTGTGTGTGTGTGGTGTGTGTGTGGTGTGATGTGTGTGTAGTGTGATGTGATGTATGTGGTGGTGTGTGTGGTGTGTGTGTAGTGTGTTGTGGCATGGTGTGTGTGGTGTGTGTGTAGTGTATTGTGGTGTGGTGTCTGTGGTGTGTGTGGTGTGATG 4 PASS ID=chr18-63103447-INS-321;SVTYPE=INS;SVLEN=321;TIG_REGION=h1tg002470l:194335-194655,h2tg003101l:8589-8910;QUERY_STRAND=+,+;HOM_REF=0,9;HOM_TIG=0,9;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=431.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:7:19:7 chr18 63169639 pbsv.INS.1015 T TTTCTTTCCTTTTCTTTCTTT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:2,1,0,1:4 chr18 63198864 chr18-63198865-INS-302;pbsv.INS.1016 A AAGACACACAGTGACACACAGACACAGAGACACACACACAGACATACACAGACACACACAGACACAGAGACACACACAGACAGACACAGACACACACAGACACAGTGACACACAGACACAGAGACACACACACAGACACACAGTGACACACAGACACAGAGACACACACACAGACATACACAGACACACACAGACACAGAGACACACACAGACAGACACAGACACACACAGACACAGTGACACACAGACACAGAGACACACACACAGACACACAGTGACACACAGACACAGAGACACACACAC 4 PASS ID=chr18-63198865-INS-302;SVTYPE=INS;SVLEN=302;TIG_REGION=h1tg025928l:27498-27799,h2tg023989l:27498-27799;QUERY_STRAND=+,+;HOM_REF=0,45;HOM_TIG=0,45;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=432.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 @@ -1343,13 +1343,13 @@ chr18 63337092 pbsv.DEL.1019 CTTTATATATATATATATGTGAATATATATA C 2 PASS SVTYPE=DEL chr18 63361017 pbsv.INS.1020 A ATATATATATATAAAATATATATAT 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,3,2:4 chr18 63427604 pbsv.INS.1021 A AACTTGAAGGAAGGCAAAGTACTGACAGGGC 2 PASS SVTYPE=INS;SVLEN=30;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,5:10:4,1,3,2:4 chr18 63469668 chr18-63469669-INS-973 T TCACATATTTATATATTTTATATAATATACACATATCACATATTTATGTATTTTATATAATATACACATATCACATATTTATGTATTTTATATAATATACACATATCACATATTATGTATGTTTATATAATATACACATATCACATATTTATGTATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATTTATATATACACGTAGCCATATTCATATTTTATATAATATACACGTAGCACATGTTCATATATTTTATATAATATACACGTAGCACATGTTCATATATTTTATATAATATAATCACATAGCACATGTTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAG 4 . ID=chr18-63469669-INS-973;SVTYPE=INS;SVLEN=973;TIG_REGION=h1tg000461l:581-1553;QUERY_STRAND=+;HOM_REF=0,8;HOM_TIG=0,8;AC=1 GT:SUPP 1/0:1 -chr18 63469669 Sniffles2.INS.136S11 C ATTTTATATAATATACACATATCACATATTATATTTTATATAATATACACATATCACATATTTATATATTTTATATAATATACACATATCACATATTTATATATTTTATATAATATACACATATCACATATTCATGTATTTTATATAATATACACATATCACATATTCATGTATTTTATATAATATACACATATCACATATTCATGTATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTATATAATATACACATAGCACATATTCATATATTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACTAGCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATAACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCAC 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=1170;SUPPORT=2;COVERAGE=2,2,2,2,4;STRAND=+-;AF=1;STDEV_LEN=135.057;STDEV_POS=47.376;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=436.2 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:1,2:3:1,0,1,1:6 +chr18 63469669 Sniffles2.INS.136S11 C ATTTTATATAATATACACATATCACATATTATATTTTATATAATATACACATATCACATATTTATATATTTTATATAATATACACATATCACATATTTATATATTTTATATAATATACACATATCACATATTCATGTATTTTATATAATATACACATATCACATATTCATGTATTTTATATAATATACACATATCACATATTCATGTATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTATATAATATACACATAGCACATATTCATATATTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACTAGCACATATTCATATATTTTATATAATATACACATATCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATAACACATAGCACATATTCATATATTTTATATAATATACACATAGCACATATTCATATATTTTATATAATATACACATAGCAC 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=1170;SUPPORT=2;COVERAGE=2,2,2,2,4;STRAND=+-;AF=1;STDEV_LEN=135.057;STDEV_POS=47.376;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=436.2 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:1,2:3:1,0,1,1:6 chr18 63470011 chr18-63470012-INS-138 G GCACATATCATATTCATATATTTTATATAATATGCACATATCACATATTCATATATTTTATATAATATGCACATATCACATATTCATATATTTTATATAATATGCACATATCACATGTTTATATATTTTATATAATATA 4 . ID=chr18-63470012-INS-138;SVTYPE=INS;SVLEN=138;TIG_REGION=h1tg000461l:1897-2034;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;AC=1 GT:SUPP 1/0:1 chr18 63559298 pbsv.INS.1023 T TTCTTTCTTTCTTTCTTTCTTTCTTTC 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,1,4:4 chr18 63584567 chr18-63584568-DEL-55 ATAAACTAATTAAAAATTTTATCTAAAGAGAATATATGCAAGGTTGCAAATAAATT A 4 . ID=chr18-63584568-DEL-55;SVTYPE=DEL;SVLEN=-55;TIG_REGION=h1tg000461l:116610-116610;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1 GT:SUPP 1/0:1 chr18 63591366 pbsv.DEL.1024 GCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTTTTTCTTT G 2 PASS SVTYPE=DEL;SVLEN=-44;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,2,0:4 chr18 63599335 chr18-63599336-DEL-57 GTAGACACCTCCACTGTCTAATTTTAGAACATTTATAACACCCCAAAAGAAATTCTAT G 4 . ID=chr18-63599336-DEL-57;SVTYPE=DEL;SVLEN=-57;TIG_REGION=h2tg011527l:60337-60337;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 0/1:1 -chr18 63786099 chr18-63786100-INS-51;pbsv.INS.1025 G GTATATATATGTATATATGTATATATATACGTATATACATATAATATAAGTA 4 PASS ID=chr18-63786100-INS-51;SVTYPE=INS;SVLEN=51;TIG_REGION=h1tg000461l:318027-318077,h2tg023284l:48219-48269;QUERY_STRAND=+,+;HOM_REF=0,42;HOM_TIG=0,42;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=439.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:4:28:7 +chr18 63786099 chr18-63786100-INS-51;pbsv.INS.1025 G GTATATATATGTATATATGTATATATATACGTATATACATATAATATAAGTA 4 PASS ID=chr18-63786100-INS-51;SVTYPE=INS;SVLEN=51;TIG_REGION=h1tg000461l:318027-318077,h2tg023284l:48219-48269;QUERY_STRAND=+,+;HOM_REF=0,42;HOM_TIG=0,42;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=439.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:4:4:28:7 chr18 64019938 pbsv.INS.1026 G GGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2 PASS SVTYPE=INS;SVLEN=28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,12:13:0,1,8,4:4 chr18 64035419 pbsv.INS.1027 C CTATTTTATTTTATTTTATTT 2 PASS SVTYPE=INS;SVLEN=20;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,0,4:4 chr18 64062148 pbsv.INS.1028 A AAATACATTATATATAATACTATATAT 2 PASS SVTYPE=INS;SVLEN=26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:2,8:10:1,1,7,1:4 @@ -1358,8 +1358,8 @@ chr18 64143771 pbsv.DEL.1030 CGTACATGTATGTACACATATTATGC C 2 PASS SVTYPE=DEL;SVLE chr18 64178936 pbsv.INS.1031 G GAGTAATAATAAAATAATTACTCAAATAATTCC 2 PASS SVTYPE=INS;SVLEN=32;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,3,6:4 chr18 64305765 pbsv.INS.1032 A ACATACATACTTATGTACATG 2 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,5:12:4,3,2,3:4 chr18 64319078 pbsv.DEL.1033 CTTTCTCTCTCTCTTTCTGTCATACTTT C 2 PASS SVTYPE=DEL;SVLEN=-27;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,7:10:3,0,5,2:4 -chr18 64389476 chr18-64389477-DEL-82 CTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT C 4 . ID=chr18-64389477-DEL-82;SVTYPE=DEL;SVLEN=-82;TIG_REGION=h2tg000122l:199832-199832;QUERY_STRAND=-;HOM_REF=0,37;HOM_TIG=0,2;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=440.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,7:7:.:7:19:0,0,5,2:7 -chr18 64491697 chr18-64491698-INS-115;pbsv.INS.1035 T TTATAATATATAATATATACAGTATATATTATATATTATATAATATATAATATATACTGTATATATTATATTATATAATATAATATAATATATACAGTATATATTATAATATATAA 4 PASS ID=chr18-64491698-INS-115;SVTYPE=INS;SVLEN=115;TIG_REGION=h2tg000122l:97552-97666;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=441.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 +chr18 64389476 chr18-64389477-DEL-82 CTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT C 4 . ID=chr18-64389477-DEL-82;SVTYPE=DEL;SVLEN=-82;TIG_REGION=h2tg000122l:199832-199832;QUERY_STRAND=-;HOM_REF=0,37;HOM_TIG=0,2;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=440.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,7:7:.:7:19:0,0,5,2:7 +chr18 64491697 chr18-64491698-INS-115;pbsv.INS.1035 T TTATAATATATAATATATACAGTATATATTATATATTATATAATATATAATATATACTGTATATATTATATTATATAATATAATATAATATATACAGTATATATTATAATATATAA 4 PASS ID=chr18-64491698-INS-115;SVTYPE=INS;SVLEN=115;TIG_REGION=h2tg000122l:97552-97666;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=441.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:8:22:7 chr18 64506546 chr18-64506547-INS-321;pbsv.INS.1036 A ACAAAAGGAATTGCTTTTTTTTTTTTTTTTTTTTTTTTGAGACGAAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGACCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCCGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTTTTTAGTAGAGGCGGGGTTTCACCACGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCGCCCGCCTCTGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC 4 PASS ID=chr18-64506547-INS-321;SVTYPE=INS;SVLEN=321;TIG_REGION=h1tg026307l:11800-12120,h2tg000122l:82375-82696;QUERY_STRAND=+,-;HOM_REF=0,17;HOM_TIG=0,17;SVANN=ALU;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=442.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:9:25:7 chr18 64545449 pbsv.DEL.1037 GGATATATATATAGGGTATATATTTATAGGATATAGGATATATTTAT G 2 PASS SVTYPE=DEL;SVLEN=-46;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:1,5,1,0:4 chr18 64545565 pbsv.INS.1038 C CATATATATAGGATATACATATAGG 2 PASS SVTYPE=INS;SVLEN=24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,2,5:4 @@ -1371,10 +1371,10 @@ chr18 64743936 pbsv.INS.1041 T TACATGTATATATATATATATATATATATATATATATATACATGTATAT chr18 64750465 pbsv.INS.1042 C CTTTTTTTTTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=21;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:2,1,3,0:4 chr18 64752564 chr18-64752565-DEL-68 CCATATGTAAAAATGCTAAATGATCTAATTTTTAGGTTGATTCTTTAAACAAAATATTTCCAGAAAACA C 4 . ID=chr18-64752565-DEL-68;SVTYPE=DEL;SVLEN=-68;TIG_REGION=h1tg006643l:4971-4971,h2tg006385l:4971-4971;QUERY_STRAND=-,-;HOM_REF=0,0;HOM_TIG=0,0;AC=2 GT:SUPP 1/1:1 chr18 64822715 chr18-64822716-DEL-113;pbsv.DEL.1043 CTATCTATATAGAAAGATAGATAGCAAAGGCCGATAATTTTATTGTATTCAATTTTTCTTTCTATATCTGTCTTTGTATTCGAGTGGCTAATTCCTATTAATGTAATGATTAGA C 4 PASS ID=chr18-64822716-DEL-113;SVTYPE=DEL;SVLEN=-113;TIG_REGION=h2tg025220l:17385-17385;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=445.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:4:8:7 -chr18 64962204 chr18-64962205-INS-54 G GTATATATACACACACACATACATGCATATATATACACATATATATACACAAACA 4 . ID=chr18-64962205-INS-54;SVTYPE=INS;SVLEN=54;TIG_REGION=h1tg003376l:78672-78725;QUERY_STRAND=-;HOM_REF=0,62;HOM_TIG=0,62;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=446.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,8:8:.:8:22:0,0,5,3:7 +chr18 64962204 chr18-64962205-INS-54 G GTATATATACACACACACATACATGCATATATATACACATATATATACACAAACA 4 . ID=chr18-64962205-INS-54;SVTYPE=INS;SVLEN=54;TIG_REGION=h1tg003376l:78672-78725;QUERY_STRAND=-;HOM_REF=0,62;HOM_TIG=0,62;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=446.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,8:8:.:8:22:0,0,5,3:7 chr18 64969996 pbsv.INS.1045 G GTATAACATATATTTATACATATATGTAA 2 PASS SVTYPE=INS;SVLEN=28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,5,2:4 chr18 65102886 pbsv.DEL.1046 TCTCTCTCACACACACACACA T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,0,2:4 -chr18 65216877 chr18-65216878-INS-202;pbsv.INS.1047 A ATGTATATATACATATGTGCATATACACATACATGTATATATACATATGTGCATATACACATATGCATATATACATATGTGCATATACACATATGCATATATACATATGTGCATATACACATATGCATATATACATATGTGCATATACACATGTATATATACATATGTGTATATACACATACATGTATATACACTTATATATT 4 PASS ID=chr18-65216878-INS-202;SVTYPE=INS;SVLEN=202;TIG_REGION=h1tg010376l:126050-126251;QUERY_STRAND=+;HOM_REF=0,15;HOM_TIG=0,15;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=447.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:11:30:7 +chr18 65216877 chr18-65216878-INS-202;pbsv.INS.1047 A ATGTATATATACATATGTGCATATACACATACATGTATATATACATATGTGCATATACACATATGCATATATACATATGTGCATATACACATATGCATATATACATATGTGCATATACACATATGCATATATACATATGTGCATATACACATGTATATATACATATGTGTATATACACATACATGTATATACACTTATATATT 4 PASS ID=chr18-65216878-INS-202;SVTYPE=INS;SVLEN=202;TIG_REGION=h1tg010376l:126050-126251;QUERY_STRAND=+;HOM_REF=0,15;HOM_TIG=0,15;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=447.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:11:30:7 chr18 65216877 chr18-65216878-INS-174 A ATGTATATATACATATGTGCATATACACATATGCATATATACATATGTGCATATACACATATGCATATATACATATGTGCATATACACATATGCATATATACGTATGTGCATATACACATACATGTATATATACATATGTGTATATACACATACATGTATATACACTTATATATT 4 . ID=chr18-65216878-INS-174;SVTYPE=INS;SVLEN=174;TIG_REGION=h2tg021808l:45020-45193;QUERY_STRAND=-;HOM_REF=0,15;HOM_TIG=0,15;AC=1 GT:SUPP 0/1:1 chr18 65238318 pbsv.INS.1048 T TTAAGGAAGAAAGGGAGGGAGGGAGGAAG 2 PASS SVTYPE=INS;SVLEN=28;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:1,3,2,1:4 chr18 65257375 pbsv.INS.DUP.1049 C CCTGAACTCCACTCCAGCTTTTAAAACCTC 0 PASS SVTYPE=INS;SVLEN=29;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 @@ -1392,7 +1392,7 @@ chr18 65990380 pbsv.INS.1059 A AAGGAAGGAAGGAAGGAAGGA 2 PASS SVTYPE=INS;SVLEN=20; chr18 66187766 pbsv.DEL.1060 ACAAATAAATAAATAAATAAA A 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,2,4:4 chr18 66339728 pbsv.DEL.1061 TTGTTAAGTGTTTAACATAAAACACTTAACAAATTTTA T 2 PASS SVTYPE=DEL;SVLEN=-37;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:3,0,3,2:4 chr18 66446414 pbsv.INS.1062 T TCCCTTCCTTCCTTCCTTGCTTTTTTTTTTTTTTTTT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=36;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:2,1,2,1:4 -chr18 66671997 chr18-66671998-DEL-232;pbsv.DEL.1063 TTTCTGGAGAAGATTAGCTAGCGGGCAGGTGGACTGAGTGGGGAAGATCTGCCCTTAGTGTGGGCAGACACTATCCAATCAGCTGGAGGCCTGAGTGAGGCCAAAAGGCAGAGGAGGAGAGAATTCTTGCTTTCTGTCTTCCAAAGCTGGGATGCCCTTCTTCTCTAGCCTTCGGATGTCAGAAATCCAGGTTCTGGGGTCTTTGGATTTATGGACTCCAGGACTCACACCAG T 4 PASS ID=chr18-66671998-DEL-232;SVTYPE=DEL;SVLEN=-232;TIG_REGION=h1tg008249l:26021-26021,h2tg007945l:26021-26021;QUERY_STRAND=-,-;HOM_REF=0,4;HOM_TIG=0,4;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=451.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:11:19:7 +chr18 66671997 chr18-66671998-DEL-232;pbsv.DEL.1063 TTTCTGGAGAAGATTAGCTAGCGGGCAGGTGGACTGAGTGGGGAAGATCTGCCCTTAGTGTGGGCAGACACTATCCAATCAGCTGGAGGCCTGAGTGAGGCCAAAAGGCAGAGGAGGAGAGAATTCTTGCTTTCTGTCTTCCAAAGCTGGGATGCCCTTCTTCTCTAGCCTTCGGATGTCAGAAATCCAGGTTCTGGGGTCTTTGGATTTATGGACTCCAGGACTCACACCAG T 4 PASS ID=chr18-66671998-DEL-232;SVTYPE=DEL;SVLEN=-232;TIG_REGION=h1tg008249l:26021-26021,h2tg007945l:26021-26021;QUERY_STRAND=-,-;HOM_REF=0,4;HOM_TIG=0,4;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=451.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:5:11:19:7 chr18 66871546 chr18-66871547-DEL-110;pbsv.DEL.1064 ATATGTGTATATATATGTATATATGTATATATGTATATTTATATGTATATGTATGTATATATATGTATATATGTATATATATGTGTGTATATATATATGTATATATATGTG A 4 PASS ID=chr18-66871547-DEL-110;SVTYPE=DEL;SVLEN=-110;TIG_REGION=h1tg006731l:263412-263412,h2tg000093l:61873-61873;QUERY_STRAND=-,+;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=4 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,7,3:5 chr18 66871574 Sniffles2.DEL.349S11 ATATGTATATTTATATGTATATGTATGTATATATATGTATATATGTATATATATGTGTGTATATATATATGTATATATATGTGTATATATATATATATACACACA A 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-104;SUPPORT=10;COVERAGE=10,10,10,10,10;STRAND=+-;AF=1;STDEV_LEN=2.944;STDEV_POS=11.161;AC=2 GT:GQ:DR:DV:SUPP 1/1:27:0:10:2 chr18 66875693 chr18-66875694-DEL-321;pbsv.DEL.1065 TAACATATTATATTCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC T 4 PASS ID=chr18-66875694-DEL-321;SVTYPE=DEL;SVLEN=-321;TIG_REGION=h1tg006731l:259373-259373,h2tg000093l:65914-65914;QUERY_STRAND=-,+;HOM_REF=0,16;HOM_TIG=0,16;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=453.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 @@ -1415,10 +1415,10 @@ chr18 67338290 pbsv.DEL.1079 CTTCCTTCCTTCCTCCATTCCTTCCTTCTTTC C 2 PASS SVTYPE=DE chr18 67453984 chr18-67453984-INS-20383 A ATGAAGGTTTTCTATGGGAAAACTGGCTCACTAGAAAATAATAATAAGAGAGATAGAGAGAAGTATGTAGCTAAGCATGTCTATTCATGTAAATTGGGTAATTGGTTGGTGGAAATATAAAACAGGTCACAAGATTGACCCTTGGGAAGTACTTCACATGGAGACCAGGGTAGTAGCAAAATCAGATGTGTACAGTTGTAGTTACTTTTGTAGATTTGTTGAGGAGAAATTAATTCTTTACTCATGATTTATTTGTGGTAATAAGCAAAGATATCTTTGAGGCATTGTATATGTTAATTAGCTCGATTTAGCTATTCCATGGGATATTTCAAAACATTATGATAAACATGATAAATATATACAATTTTTATTTGTCAATTAAAACTTTTAAAAAGTGAGATAAAAGAGCATTTACTGCCCAGCACTTTTGTGAGAACAAATATACTACTTGGATGCTGTTACAAAGCGTGAGAAAGCTCACTATAAATGCTAGAAAATGATGTTTTTTAAAAAGGCATTTGAGGGCCCAATTGAAGTTGCAACCCTGGAATTTATAATGCTACCAAACCACCTGGTTACATAATTATTTTTATACCAACACAAAGAAAAGGAAAACTTTATATCGATCTATGAATGAAATTACTTTCATGAATGTGCAGCAGTGATAGAAAAGGAAATGAAAGTTCTTCCAAGAGAGTAGTTGAAGTTTTAGACTATAAGAAAAATAGATATCAAGAAATTTGAAGTTCTCATGTGATTAAAAAAAAGTATTTAAATAACTGAATGGAAGTTTTATAAGTTTAAAGCATTGTGTTCAGATACTGTGACATATTTGATATATGATGATATTTGAATATAGATTCTGGTATCTCACATACATTTGTGTTTTTAAGTCCCACCACTGAAAATTCTAATGAGTGTAGAATATTTTTTTGAGTCAGAATTAGATTAATACGTTTCTGTTTACTTTTGTTGAGCTGCCAAAGCTTCTGCCACCTTAAGAAAATCAATTACAGCCAATTTATGTCTGGATTTCAGGAAAGCTATTTGCAAGAATCTAAATTTAGGAAAACAAAATCCTATCACTCTGCTGTTCAAAATTGTAAGCCAATATTGGTAAAAATATATTAAATTGCTATAAGCACAATAATACAAGAACATTTAAAACTATCAATACCATTGCTTTTTTAACAAGTTCTAGCAAATTTTGATTGATAAGTAATTTTATATTGAATGGACCAAATTTGTTTAGATTTGGATTAATATACTATAGTTGGGATAGACAGATGGATAAAAAATACGCCTGACTTATTTTATATGCATTAGCTATTCCAAGAACAAGCATTTTTGTCTCTTCTTTCCAGGCTATGTCACAGGCACCAGGCATGAATTTTTAAAATCTAGGTCGGTGGTTAGCAATTGAAGAAACAAAGTATCAGAATATTGTAAATATCTGAAATGTATATTTGAATTTTCTATCCTCTACTGACTTCTATATTCTACCTGTCTTCATGTAATATAGAAGATATCAATACCTGTAGGTGGCAGGTAAGACATTGAGTATTTTAAGAAAAGATCTTTAAATGATCATTTTGATAATTTGATGGGCACCTCTGGTTAAGCGTAACTCTCCAATTCCCAATAGCAGAAACCATTCTAAACCAAAAGAGGTCCTTCACTCTAACAGCTAGTGGTGATAGTCACACTACCAAGAAAACTGTCCTATGACTTTAAAACCACCACACGTGGTATAAACTATCCTGGAGTCTGTATCCAAGCAAAATACTTAAACCATGGAGGAAGTAACGTATTTCTCTTTCCATTTAAGCCATTTGAAATTCCAATTTAACAAAAGTATAAATAGAAAAACCAATTATTTTCATCAAAATATTAGTTTATACTTTAGTAAATTTATTAAACTATTTTTGACTTTATAAACTCTAGGATTGTTGAAGCCAAGTGCACCTTTATCAAGGGACTGATCAAAATAAGATTGCAGATCAGCTGAGTCTCATTATAATATAAAAGATATTCTCCAAATTTTTATTACTGAGTTTTAGTAAAGGACAAAATAATTTGCAAACTATAGCAAACATATTTAAAGGTATTTTCCATAGAATAAAAAGAGACACAATTTCTGTAACATTTCTTTAACCTCTAATTGATAGGTAATCACAATGGAGATAATGGTTTCTAAGCCCCTATATCTAAGCTGCTCTTATATCCATGAAGCCCTATAGTCGATGTCACAATTCAACTTTTAACATTCATTGATGGCCATAAAAGCGTAATTGATAACATTGAAATGGTGACCACTGTGTTCCTCCAAAGCTCTTTCCTGTAATAAAATATATAAAAGGAAATTATCATAGTTTATTAGCAATCATTTTCCACTTTAAAAATTTAACACTGCCTAGAAAAAATTTCACATTAAACTAGCACCTGTGAAATTCTTCCACAAGGATAACTAAATTTTCTTTCATGATAATTCCCTTTTCTATACATAAAATAATGATCAGCAAACCATATACCAGGAGAAAACTTTAACATGCTTTTAAACAGCATCTACTATTTAAGTATTTAAACTAGCCAATTTAACAGAAAGTAATGAAACCATTTTCTTTGTCCACTGACATTTTGACTCTACATAAAAGTAACACTGGTAGACTCTTACTTGTGACCTACTTCATTTATTTTTTTTTTTTACAAAACTAATCTTTAAAAGTCTATCGTGCAAGGCCACAGGCAAGATTTTATGAGGTAAGTAAGAAACCCACATGGATAATATTATTTAACAAAAATCCATTTTAGGAAAATAATTGGCTTCTATGAAGAATCTGTGTCAATCAAACAGGCTACAGTACACAGCCATTTGCTCTGAAGGCTAAGCAGGCTTGTACCTACTGTAAATACAACCTCTGATATGTGATGCCGAGTTTCCACAGCCTAATCCCTCAGAATCAGATCAGAACCATGGAGCTCTCTTGCTGTGAGCTCTAATATACTAACAATTTTTAGAAAAACAAATTTCTACCTCTTAGTCTCTAACATTGTTCTAGGCAATAAAGAAAGATCTTGGTTTTTCTTTTTCAATGCTTGAGATAGGGGTATAGGTGACTAAGGCCTGGGACACATGGTAGGTTATTAATGTGGAATGATCAGTCACTTATTTTAAAGATAATTACGTATTTTAAAAATCAGGCCGGGCATGGTGGCTCACTCCTGTAACCCCAGCACTTTGGGAGGCCAAGGCTGGTCTATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAAACCCATCTCTACTGAAAAAAAAACAAAAATTAGCTGGGTGTGGTGGTGCATGCCTGTAATCCTAGCTACCTAGGAGGCTGAGGCAGGAGAATCGCTTCCACCTGGAAAGCAGAGGTTGCAGTGAGCCGAGATTGTGCCATGGCACTCCAGCCTGGGCAACAGAGCAAGACTCCATCTCAAAAAAACAAACAAAAAAATTGATACTCGTTCATAAGTCCTTTCCTCCATGATACTATAAATGTATCAGGTCCACTTTTTTCTTCTTACTTTAGGTGATCCTGTGGCAGGCCAGGTCTCACTAACAGCTGAACAGGCAGGCCTCCATGGCAACTGTTTCAGCACTGAGTAGTTAAGTTTAATAGAGCCAGTGTCCTCATACGTAGGCTGGAATGCAACAAAATCCCACCAATAGTTTTGCCTAGTCCTTTCTTGGGCCTTGGAGCATGACAAGATAACGAAGGAATTCTTAACAGGACCCCTTTACAATTAAATATGTTTTATTGGGGGCCTGAAGGACCTCCCCAGACTGCCACAAGCAAGCTTTACTGGGGACTAAAGGAACTCCCCAAACCTCCATGATTTAGTAGGAGACAAGATAAGGGTAATCTCTGTGGTACCTGGACCCATTTAGATTAAGTAAATTTACTCAGGCTCCAGAGGAAGGTCTTCAAGACTCAGATCTTAGTTATAGATTAGAAGTTAATCACTTATGTCTTTAGATGAATGCACACTTACATGTAGACATATAGCTTAGAAGTTATATAAGCTCTGCAAAACTTTGTAATTTTGAGTTGGTCTGGTGATATTTCCCCAGCCTTCTTCCTATACCCGGTTACAGAAATAAACTCTGTTCTTTCCCAGTTCATCTTCATCTCGTTATTGGGCCACAAAAATATGCAGCCTGACCCTTGGTTTGGTCCGAGAACAATTCCACTATAAAATGTGGATTTATTATTGAATTATATCCTGTCTTTGAGGAGCAAGTAATAGGATTCACAATTCAATCTCCTGTACCCCATATATTAATTGGCTTACATGGCTGGAAGTCCATGTCAGACAGGGAAGGCTTTGCTTCAGGCCTAATCCAGTTTCATTGTTCTCTGACTTTGTCATCTGGCCCCTCTTCTGTGTGCTAGCTTCATCCAGAAGTTAGCCTCTTTCACAACAGTAAAATGCATACAGCAATTTCAGGCTTTCCACACACTAAGTTTCCCAGAGATGAGCAGAGTTTCTTTTTCTGTGGCTCATACGCTAAGATATTTCTTCCCAGAAGCTTCCAGCAAAACTCCCCTCGAGTCATATGTGTGTGAATAGAGTCATAAGCCAACCTCTGAATCAATCTTTGTATCAAAGTGATCAAAGTGGTGGAATTAACTCTGGATCAATGATGCCTCATCCTTGGAACTAGTAATGAAGTCAGTTTCTGATCAGCTTCCTTAACAGAAGTCAAACAAAAACCTACCAAAAATAGGTATCATTGTTATGAAAAGTGAAAATATTTTAGATTCTGAGTTTTCTTCTCACAAAAGATTATTCAAAACTAAGTTTAAGAGATATATAGTTTTAACAAGACACCAGAGTATGAGTGATATATTACAATATTAATGATATTTATAGAATAGCTAAGATTTAAAAATAATTGTAATTATATTGATATAGTGAGTTAGAAAATTATTAATAGCAATTACTCATCAAGGAAAGAGTTTGTTATTTTGAGGATTGTCGTCAAAGCTGAAGAACTACAATAAAACAAACAGAATTTTATCACATAACTTAGAAATAGTAAAACACACCCCAGAATATTAACTGAGATATTTCCTCATAACCAGTATGTTTGGAGTATAGCATATAAGAATAGATAATAAAAAATGTTCATTAAACAACAACCAAGAGGTTGAAACAATTTTGATTAATCTATTTATGTCATGGATTCTTTACAAAAAATTTCTTCTGGTTTGCCTCTTGCTTAAGCATTACAATTCTAGTATTACATCTTATTCTAAATAAATTATTATATATTTTAAACTGTTTTCAAAGATATGTATGCATGATAAAATTGTCTGACATTTTGAAAATTGGATTCTCTTGAAATTGAATGAATTGAACTGAATCAATTTGGTGATTTTTCTGAAGATTCTTGTTTTGGTTAATTATTGCTGCATAACATATTACCACAAATCATAATGGCTTAAAACAACAGCCATTTATTTTACTCATAAATTTGCAATTTGAGTAGAGCTTTGTTGGAATGATTCTTCCCTGCTCCTCATAGCATTATCAAAGGCTGCCCTAACAGGGGCTAGAAGACCCACTTTCAAAATAGTTCACTCACATGACTGAAGAGTATGTGGGACTTCAGCTGTGCTAGTGGGATTGGCACCCATGGCTGACTGGGCATCCTCAGAGCAGGAGCGTGGTGGGTGGGTTCCAAAAGCAAGCCTCACAAGAAAGCAAAGCAGAAGTGCATGGGAGTGTATGATCTAGCTTCAGAAGTCACAGAACATCAATTCTAGCATACTGCATACAACAAGGAAATTACAAAAGGCCACCTAGGCTTACAGCACCAAGACATGATGTAACCAGTTCCTAAGAAGCATATAAGATGAGAGATATTGCAGCACCCCCATGTGCAAAATACAACCCGAGTCAACCCCCAGCAATTACTTTCTTCTTCTTCCCTCTCTCTTCTCCCTTGCTCCTGCCATCTCTCTTTTATCTTTACTGTGTGGATTTATTTAACCAATTTATATGGTTTGGCTCTGTGTCCCCACCCAAATCTCACCTTGAATTGTAATAATCCCCACATGACATGGGAGGGAATGGGTAGGAGGTAATTGAATCATGGGGGTGAATTTTTTCTGTGCTGTTCTTATGATAGTGAATAAATCTTACAAGACCTGATGGTTTTATAAAGAGGAGTTTCCCCGCACATGCTCTCTTGACTGCTGCCATGTGAGATGTGACTTTGCTCCTCCTTTGCCTTCTGTCATGATTATGAGGCCTCCCCAGTCATGTGGAACTGTAAGTCAATTAAACCTCTTTCCTTTATAAATCACACAGTCTTGGGTATGTCTTTATTAGCAGCATGATCATGGACTAATACACCTACTATCTATTTATAGAAATGAAGTTGGAGAGCTACTGGTTGGGGAGATATGAAAGAAAGAATGTAATAAACAATCAATCCCACAATCCTGGTTATTAGCCACTCACTTCTCCTAATCCATACACTTACCCCAAACTTCTTGGTATCTTTCATGTTCCTGTGGTCATAGTTTAGGTTATCTGTTATTTCTTTGCATCCATATGCATTCATTTAGATACTATACAAATAAATACTGCAAAATATTTGGAAGCAGACAAATGGGTTTTAATCTTGGCTCTGCTATTTATTAACAATGTGTTTTTAGTCAGTGGCTTCATGCACCTCAATATATGTAAAATGGAGATAATGATGTATAGAGCTTCTGGGTGTATTAAAGAATTATATAGAAAATACTTAGCACGTAAGTGCCCAATAAATGGTAGCTATTCATAATCATTCATTCAAGCATGCATAAGACATTTTATATGTATACACACACACACACACACATATATATATACATATAGAATTATAGAATTATAAATGAGCTATTGAGTTTTGCATTTATGAACCTGCAGTTAATTAGGGGAGATGATCCTATAACAAATCTTTTCAGACTATTTGGGGAGATTAAAAAAGGGGGTATGCTCTGCATGAAGTATTTGCCTTTCAGGAACCAGAACTTTGAAATATACAGAGTCCAGATTTGATATGTAAATTCCTGAATTGGTTCATTAAGGGTAAGGAGAAGCAGAGCCATTTTTGCCTCCACACTTTGGTCTTGGACCCATGTATTCTTCTTTTCAGAAGCGCACCCTAAAACAATTTTAATTTGAATTTAACGTTTCTATGTGTGAAGATGCTGCGGCATTCTTAGGAGGTATTGCCTCTGAGCCGACACTTCAGCTGTCACTTTACAAGGCTGTTCCAGTGCACTTCTGATTAATGCAGGGTGCACTATGACCAGTGGATTCCTTAGCCATGGCCCACTGTGCCCTTCCTTTGCCATGTGACACCTGTTGGTCTGTGTGGTATGATGTAGAATATCATGCATGTGAATCAGTTACACTGTAGGCCCTCAGAGAGTGAGACAGACTCAGACCCTGCAGGAAGGTAAGTCAAACCTCTTCCAGAACATGTACCCATTCTATCAGCATGAACCACCAGAGGCCTGGGGAGAAGGAGTCCAGCGAGACTAATCTGCCATCTTTCTTTAACATGTGATGTCACTTTCCTTAACATAGTATGCCATACTGGAAGTGCAAAGCTGCTCTTTGTTGATGGCAGGCTTGACATTTGGTAGCGACACCAGCTGGACCAACCTAGAGAGGTGAGAGCCCATGCTGTCGGGCCTATGCATAACCTCCACCTAAGACCCTGTATTAGTCCATTTTAATGCTGCTGATAAAGACATACCTGAGACCGGGCAATTTACAAAAGAAAGAGGCTTAATTGGATTTACAGTTCCACATGGCTGGAGAGGCCTCACAATCATGGCAGAAGACAAGGAGGAATAAGTCACATCTTATGTGGATGGTGCAGGCAAAAACAAACAAACAAACAAAGCTTGTGCAGGGAAATTCCACCTTATAAATCCATCAGATCTCATGAGACTTATTCACTATCACAAGAATAGTGACGTCAATGCCTGCCCCCATAATTCAATCACCTCCCATTGGGTCCCTCCCACAACATGTGGGAATTCAAGATGAGATTTGGGTGGGGTCACAGCCAAACCATATCAGACCCCATATGTGCTACTTCATTCCTGTGCTCATTGAGAAAGCAATGGAATGGCCAATAACAGAGGCTGGGTGACATGTTCTGGCTGAGTCATTTTGGTCTATGTGGTTGTGTTATGACTCCTCCGTGCCAACTGTTTTTGGTGGGTTACCATGAAATATTAATATCCTTATGCTTTGTGCTTACTCTCGTATGTCTAAACATGTGCCTCTCCTCTAGACCTTCTAAGCTAATATGGCTCTACTCTAGACCTCCTTAGCCCTCCAGGCTTCTAATCAGCTGGACAGGCTTTTAGCAGGTGGCGATTTGATATACATTCTAACCTCAGGCATTTTTCATTGTATGCCAAGTGGAATACTACTTGAAGCTCTGCCCACAGGCGGGACTTTTTTCTAATCACTGTCTTTCAAGGTCACCCCTGAGGCGGACTGGGGTGCACCTGTCATCCATTCTAAACTGCACCTGCATTCTATGATGATCCATCTGTGAACAAAGCTCCATGTTTCCCTCCTTTGGCTGCTGCCATAAGGGACCCCCATTGCAATTATAGGTTTGAACCCAGGGAGGGGCACTAATTCCTCAGTAGTAGATGATACAGAGTCTGGGCTACCTGGTTTTTGAACGTTGTTTATGCTTGCAAGTCCTGCTTATGCCCATTTTCATCTTAAAAAGAATTGTTGCAAGGCCTGCAACTGTATGACTGAGTGGGTCTGAGAAAATCCAGTTTATGATTGGCAGCTCTGATTATATGGTCACTTGATGTCCTGTAGTCATATATCTCTGTCTTTCCCAGGGTTCAATAGCATGCCAGGAACTATTTTGCAAAAGGTGTGTAATTTTTGACTGCAGATATGTTCTAGGTCAAAAAACCCTCCTGGTTGATACTGTGATTATTCTATTAGATTTTTCTATAAACTACATATGTTATCTCTCTCATCACTGATAGCTTTAATAGCATAGAGTCATCTATACAGCCCCAGCAGCTGTCCAGACCTGCCACAGAGTACATCTGGGTCTGGGGCTCCACTGAAAGCCGAAAGCTTTTAATGTCACCTAGTGTACAGGTTGGGACACTCTTAAAGGTGAAACATGCTTACTCCAAAACTCAAAGAAGTCTATCAAGCAGTGTGCTTTCATCTTTCATTGTGGGAAGTTGAAGATGCAATAATTTATCCTTTACTCTCCTTGGTCCAAAACAGTCAGATTATCTGTTTCACCACGTATTCATGTTATTAAGAGATATCTTGGATTGTTAATGCTTTTATGGACTTCTTGACTATTTGCCTCTGAAATTAACATAGTAACATAGTAAATATGTATTTAAACAAAAATATATAAAGTTAAACTAACCTATAGGAGTTTTCTTTATAAAATTATAAGTACACATTTCTACCTTTAGTCAAATTCTTGAGTAACCATAACCACTTTCAGTTCTTAAACTCAGTGTATAACTAATAAACTTAGTGTGTATTATTGGTTCTTCTCATTGACATGATAACAGGAAAGCAAAGAGAATTTTGAAGTTGATCAGCTTTGAGGGATATTAAATATTTGCATTTTGAAATTAAACAATGAGAAATATAATCTGCAATCAACAAGAGGCTGCATTACATTGCTGATGATAAATGGTGGAAAATAAAGTTGGAAATACTGGTTTCAAATTGTATCTTCTAGGGATTAAGAAAAAACTTGATTGCTTAAAATGAACTTGATTGATGAACAAGATGAAATATTTAAATAATCTGGTATAAATATAATCATGTGTGAAATTTATTGGTGGTTAATGTAAATACTAAAATTTCTAGTAAAAAAAGAAAAAGAATAGAGTCAAGACGTTTGCAAGTCCAGTCTACCTGAGTTTATGCCACGAACTAAGCAGAAATGGAATTCTGAAATCAGAGTTGTTATCTAACACTGGGAAAGATATGAGAATAATTTCATGTGACAGAATAATTTGTTCTATATTGCAGTTAAGAAAATGATAAAAGCCGTTTAATTCATTTGACAAAGAGATTTGAAAGGTTTCAAATTTATTCAACTGCTTTCTGAAGTCCCATAGCTACTTCCTGTAATTGTCCACTGTATTTGCATACCAACGAGAGAAAACAGTAATAACTTTCAAGTTAAATAATTCAAGCTTTCTTAGTTCTAATTCTGCTAAATTTCCTATTGAACTTCAAAATTTTTATTGTTCACTCAGAATCAGTTACAACGTCTTTGCTGCTTTTTCCCATTTTCTTTTTTTTTCTTTTTTTTTTTTTTAAGACAGGTCTCACTCTTGCCGGGGCTGGAGTGCAGTGGCATGAACATGATCACTGCAGCCTTGACTTCCTGAGCCTCAAGCGATTCTCCCATCTTAGCATCCCAAGTAGCTGGGAGTGATACCATGCCCAGCTAATTAAACAAAACAAAACAAAAAAATTTTGTAGGCCGGGGCACGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAACTCTACTAAAAATACAAAAAATTAGCCAGGTGTGGTTGCGCGGACCTGAAGTCCCAGCTACTCAGGAGGCCGAGGCAGGAGAATGGCGTAAGCCCTGGAGGCGAAGCTTGCAGTGAGCCAAGATTGCGCCCCTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAATGCAGGGTTGGGGGTCTCGCCATTTGGTCCAGGCTGGTCTCAAGCTCCTGGGCTCAAGCTATCTTCCCATCCTGGTCTCCCAAAGTTTGGGATAACAGGTGTGAGCCACTGGACCTTGCCTTTGCCTTTTTTCTTCAAATGAAAGTACTATTGTATTTTAGCAGACTACTAGTGTCTTCTTCCTCCTCCTCTTCTTCAACCTTCTTCTCTTTCTTCTAAAGTGTCCCTAGATGTACATAAGACTAATGAAAATCCTTATTCTGTGATACACTGTCATTACAAATCTATGCAAGATCTCCTTTCCTTTCTTCCTTCTTCCTCTCTCTCTCTGTCTCATTCTCTCCTTTTCTCTTTTTCTTTCTTTTGTTCCTTCTTTCTTTTTTAAAATTAATGTGATGAACATCTGTAGCCCACGACCTCATCCAGCACTAGCATATTAACTAAGCTTATCTCTTGATATCTTCCCTTTTCCCATTCTCCTTACACCTTCAACTTTTGAAGAGCAAAGAGAAGAAAGGTAAATATAAAACACTAAATTTGAAAAAATAATATCAGAAGAGTAGGTTTAGGAGGTGAAAAATGAGAGCAAGATGGGGTAGATGAAGAGAAGAAGTGAGATAGAATCAAAACAGATAGAAAGGGATGGCGGGGGAAATATAAGAAGGTAGATAAAGAAGTGCTTCTTCATATTCATATTTCTCTAGCAGCAATAATTTATTAGAATGAAGCTAAGAAGGATGATATCTGCCAAGCCACTCATCCCTCTGGGCCTGTGGATTGGTCATTTGTAAGATCTCTTCCAGCTGAATAAGTACTGCTCTTATCACTTCCAAATTTTTAGACCTCATGGGAGGGATTATTTTGACTGTGCGATTAGCTAATGTGAAAATAATTAATGAAAGAGAAGAGTTTAAAGCAAACTTTCCTGAAGGCCAGTTTGATATTTACTAGGTTTAAACAGAAACTGATGATGCCTTTTAAGGGAATTCTGAACTTGAACTTCTTTGGGACAAAATTTACTCATGAAGTAACATTTTGTAGTTCTCAGCTAGGGTGAAAGATAATTTAAACTTAAAATAAATTTATCTGTATTCATCAATATTGAATGAAGTAGAGAGAAAAGTATGCCTCTTTTCCTCAATTATTCCTTATCGACAATTAATAATGCATGTTGAAATCTATTCCTTGGTGCTGTCATGGAGTTGATTGGCATTCTTTACTAAGCTTGGGGCAAATGTTATACTCTTATTTTAGAACACTCTTGGCTTGCTCTTAGTCTTGTAATAAACAAAAGAACGTACTTATTTGGTCCATTGTGTATTTCCCTCCCCTAAAATGAAGACAGAAATTCTTATCTGATTGCTAATATACCCCAAACACTTTTCATTTTGTGTCACCCATATCAGGTGCTGCCACATATTTGTAAAATGAGTGAATGAATTGCATTGAGCTATCACATATATTTCCACTTTAACAAATCTAATATTGTAATAAAATAATTTCCTTACACTCCTTCAGGCAAGAAAACATTGTTCTCAACTTTGCTTTAAATACTAAATTTTTACAATCTTGTATTACCTATCACTCAGAAAACAATTTGATATAAAACTTATTTGGCAACATAATACTCAAATTAGAATAGTCATTAAATAGATCTTATTGTCTTAACACTGAAAGGCTTAACCAGATAAATTCATCATAGTGTTCTCTTTAGTTTTAGTGAAGGAACAAACAAAAGGCATATATATATATATATTTTTTATATATTATACATATTTTACATTAATATATAATTTAATTATATACTAATTTTATAAAATTTAATTATATAAATATATATTTTTATTAATTATATATAAATATATTATTATACATTATAGTTATATCATATTTATAATTATATTATATTTATATTATATAATATATAAATATTACATTTATATATGAATTAATTATATAAATATATAAAATATTTATATAAACATACACAAATATATAAAAATATTATACACATACACAAATATATACAAACATTTATATACACATAACACAATATATACAAACATTTATATACGCATACACAAATATATAAAAATATTTATATACGCATACACAAATATATAAAAATATTTACATACGCATACACAAATATATAAAAATATTTACATACGCATACACAAATATATACAAATATTTACATAGCATACACAAATATATACAAATATTTACGTACGCATACACAAATACATAAAAAATATTTACGTACGCATATACAAATATATAAAAATATTTACGTACGCATATAAAAATATATAACAATATTTATGTACGCATATACAAATATATAACAATATTTATGTACGCATATACAAATATATAACAATATTTATGTACGCATATACCAATATATAACAATATTAATGACGCATATATAAATATATAACAATAGTTATGTACACATATATACATATATAAATATATAAAATATTATATAATTATATATACTATATAAATCTATAAAAATATATATACATATATAAATCTATAAATATTATATACATATATGAATCTATAAAAATATTCATATATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATAAAAATATTCATGTATACATATATGAATCTATGAAAATATTCATGTATACATATATAAATCTATGAAAATATTCATATATACATATATACATATATAAAAATATTTATATATACATATATACATATATAAAAGTATTTATATAGACATATATAAAAATATTTATATATACATATATAAAAATATTTATATAGACATATATACATATATAAAAATATTTATATATACATATATAAAAATATTTATATAGACATATATACATATATAAAAATATTTATATAGACATATAAATATATAAAAATATTTATATAGACATATAAATATGTGAAAATATTTATATAGACATATAAATATGTGAAAATATTTATATAGACATATATAAATATGTGAAAATATTTATATAGACATATATAAATATGTGAAAATATTTATATAGACATATATAAATATGTGAAAATATTTATATAGACTTATATATACACATATAACTATATAAAAATATTTACATGGACTTATATATACACATATATATAAAAAATATTTATAGACTTATATATACACATATATAAATATATATAAATATTTATATAGACTTATATATACACATATATAAATATATAAAAATATTTATATACACACATGTAAATATATAAAAATATTTATATACACACATGTAAATATACAAAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACACATGTAAATATACATAAATATTTATATACACATATAAATATATATAAATATTTATATATACATATAATATATATAAATATTTATATATACATATATAAATTATATATAAATATTTATATATACATATATAAATTATATATAAATATTTATATATACATATATAAATTATATATAAATTTTATAAAATTTAATAAATATATATTGAATATATTTTAAATATATAATATATTTATAATAAATTTATATTTAAATATATATTATACCAATACTTTCTATGTATACTTTGAATATATATTATATATAATATATAGTATTTATAATATATTATATAGAATATATATAATACATAATATATAAATATTAAATATATTTAATATATATATTAAAAGTACACATAGAAAGTCTTACACAGCCAACAATAAATGACTGTATATGTACTTCCTCACCAAAAAGAAACATTTTCTTAAATTTATTCAATTAAGATTTCTTAATATCTGTACAAATAATGTATCAGGTGGCAACACATAATTAAATATAAAATTACCTATTTTATCTAATTATTTATAAATTTAAGCTTTTTTACCTATTACATTCCAGATGCTATTTCATTTGTCTTACCAATCTATGCTTGCATGTCAAATTTTTATAAATGAATTTGCTCTGTAATGAAATATTTGAAAAATAATTGCTTCCTACTGTGCATGATGAAATTCTTAGAGAGAGATAGATGGGAGAGTTGATGAGGAAAGAGAGGGGAGAATGGAGAAGAGAGGAGAAAAGGCAGGGGGACATATTTTAGAGTAATAGAGTCATATAAATGACATTAGCAGTACTAATTTTAAAGTGAAAAATGGATACATGTTCACAACCCTTGTCCAAAACCCTTGGGTCCAGATGTATTTCAAAAGTGCAAATATTTCACACATTAAGAAATTAATCCAGTGCATATACTGCAAGTTTTGGAACAACCCAGTGAAGTCTCAGGTAGTCCCCCTGTAATCAAGCACCTTAATATACCTGCAACAAAAATTCGTGTGATGACTCTTTTCAGTGGGGTCAATAGTCTATAATATATCGTAAGTACAAATAAGTGTATTGTGCATATGCTAATTAAAAGTACAGACTTCATTAAACTTCTGTTATATAACAAAAATTATAAATGGTTTCTTTTTATCTCTATGGGTGTATATTGTTTTATAAAAACATGGATTGTAATTAAATGGTTCCTCAAAGTTTATTCAATTAATTGAAGACAGAATTACACATTAAAATTTGGAATGAATTGAACTATATAGAGTTATGAAAAAGTTAAAGACTCACAAGAATCTTAGAAACTATTTGGGGAGACTCGATGTATACATACAGAACAGTTTAAAAGTAACAAGATATTATGGAAATAACTGGAAAATAATATAAATAGTAATTTTTTCACAGAGGTTGATAGGAGTGATTACCATAGAACAATAAGGAAAATGTAAAAATTGAACTGGATATTTGGGAAATAAATGGGGAGGTGTTAAGACCAAGACAAAGGGACCATTTGGCTGAGTCAAGGTGTCACACAGAGGAAGAACCAGGACATTTCATTCCAGGTATGTGTATGCTACTACTTGGACATAGCTATGTCCAAAAAAAAAAAAAAAAAATCCTGACAAAATAAAATTACCTGTGTATTTTTTTGGTACAATAATGTATAAGAAAGACATCTTTATTTCATACTAACTTACCACATTGCAGCCAGTTTTTGCTTCTCACAAAATTCATTTTGAACTTTTTTCTTTAAGGAAGTTGCTACGTTTGTAATTACCAAACACCCAGTTACCAAGTTTATCATTCCTCTTTCCCTTGAACCAAATGTATTATTAGTTAATAAAGCCTTTGTATAATGAATCACAACACAAACCCACAAATTAGAGAATATTCAAAATTCAGAGTATTCAAAATATTTTCGAATATCATATTCTCCAGGAATGAGCAGAGTAAAGTGCTTTTATTTTTAAATAAGCACATAGGTTATGATTGCACATGGTTTACCTAACGGATGTTGCCGAATCCCGTAACATGTTACCCCAGGCTTCCCAACACATGCCTGATCCTTTAGTAAGCTCATACCCAGGAGTAATGGTCAACGTGCAATTGGAATAGGTTTATAAATTAGTATATATGTATATATATATTGTATAAAAAATAAAGATATTGCACCTATTTTTAAACTTCTTACCAAGCAATAAATTATAACATAAATTATCTATCATTAACTTCTGAATCATTGATTGATTTTTTTTAATTGTTCATGTAATCTTTTGTATGGCATGACTGTCACAAGTGAAAGATTATCCTTTCTCAGGTAGGAGATGATATACATAAACTCGTTAACATTTTCTAAAGACTTTGCCATTACATTAATAATGATTAGAAAACAAAATTTCAATTTGGAGAATAATTCTCTTATGATCTATGAAAAAAATATATTTTTATTATGCTAAACTATCTCATATTCTTCAAAAATACCAGCAATAAAATTCAAAATAGTGTGTATAACGTGTGTAAACATATTTACAAGTACTTGATATATCTTATTTATCAAGTCAAAAAAGTCACACTTGGGAGTATCATTTTTAATTAGTTGCTTTAATTTCAACATTTTTTGTTTATATTTATCCACAGAATTTCGGAGACATTATTTTGTTATTTTTAGGACTAAATGCATATTAAAATAAATAAAATGAAAGATCCTAAATATTTATTATGATTTACATGTTTGTCATCAGGCAGTAAAGGCATTTTTATTTAATATTATTTTTATTTATTTCTTCTTCTAATAATTTTTTTAAGAAAGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAACTTGGCTCACTGCAACCTCCGCCTCCCAGATTCAATGAATTCTCATGCCTCAGCCCCCCGAGTAGCTGGGATTACAGATTTGCACCATCATGCCCCGGCTAATTTTTGTATTTTTCGTAGAGACGGGGTTTCACTATGTCTGGTCTCCAATGCCCGACCTCAGGTAATCCACTGGCCTCAGCCTCCCAAACTGCTGGAATTACAGGCATGAGCCACCGCGCTCTGCCTATTTTTACTTAATAATAGACAATCTAAAAGCTTTTAACTTCAGAATTTTTCTTTTGCTATTTTTCAAGTAAAACATATTTCACCATTTTCATATCTTCCACTTTTCTTTCTGGTTTTCTGTAAGTAGTTGTACACATAGTCAATCACTTATTAGGTCAAATTTATTTTGAATGATTGAAACATTACCTTTTTGTAAAGCAAAATAGATAATTGACTGTTTTAGAATAAAAGTTGTTAAAACAATTTCTAATATATATATTTATGTATGTATATATACCATATATATCACATATATATTTTAAAAATATATATTTACATATGTATGTATATATGTAATTATATAGGTATTTGTATATGTATTATATATGTATGATACACACACACACGTGTGTGTGTGTTTCCCCAAAGTTTATCATTCTGATTTCACATTTTCTAATGAAATACAAGGTCAAAATGTGTTTTCAAACTGTTTTTTTAATCTCTTCATTACATAATTTCCTTTGAGTTATAATTTTTAACTTTCTATTTCAGTTCTTAACTCTTCAGATTTATTATTTAATCCTCTCATATTACTTGATGTATTTTAGAAAAACACATAATTTATCAAGACAGGCATGTATGTAATTTACTTGATTTCTTTTATCGAATGATCTATAGTTAATTGAGAACATCATGGAAAGTAGTACTCTGTTAAAAAAAACAAAATTTTTTAATGTTGGCTAAAACTAAAAACTTGCTTTTAGCTGGGCAAAGTGGCTCGTGTCTGCAATCCCAGCTACTTGAGAGGCTGAGCCAGGAGGATTGCTTGAGGCCAGGAATTTGAGACCAGCCTGGGGAGACACCCCCCCGACCACGTCTCTAAAATAAGAAAAATTAACTGGGTACGGTGGTTTGTGCCTGTTGTGCCAGTCGACTACAATGAGAGGATCATTTGGGCCCAGGAGCTGTGAAGGCCACTGCACTCTGCAGAGTGTTTTGTTTTGTTTTGTTTTGTTTTCAGAGATAGAGTGAGACCTTGTCTCTAAAAATAAATAAATAAATAAATAATTTAAAAATTAGCTTTTGTCATGATATCAGCACCATCTATACAAAATCTAATATGGTTTTCATATGAATATTTCCTATTGCAACATTTCCTTCAAGCACCAACAATAGAGATTCATCTTATTTTGGTAATTTTCTATTTTGATCACAAAAGTTAATAAAAATGTGCACAATTTCTGTCCTTTTATAAATTCAAAAGATTTATTTCTGTGACACATTAAAGAAATGTCAATGATATTATCCAAACTTTGTTGTCTTGTTTGTTCTTCATGTTAGTTTTTGATATTCTACTAGAATTGTTGAATTTATGAGTATTATAAAAATCACAACAGTTTATCAGAATAAAATGTTCTGGCTGAGTATAGTGGCTCATTCCTATATTCCAGTGCTTTGGCAGGCTTGAGGCCAAGAGTTTGAGACCAGACTGAACAACACAGTGAGACCTTGTCTCTACAAAATATTTTAAAAATTAGTGGTGTGGTGGAGCATACCTATAGTACCAGCTACTCGGGAGGCTGAGGCGGGAAGATCACTTGACCCCAGAAGTTGAGGACTGAAGTGAGCTCCGATCACACCACTGCACTCCAGCCTGAGCAATAGAGCTAGACCCTGTCTCAAAAAAAAGAAAGAAAGAGAGGAAAAATGTAAAATTCCAATAATTGAAAAGGGGCAGCAATGACCTCTTTTGTGAATAGCAAACCCTGAGGAATCTCCTTAAGCACAGTTTTTCTACAGAATGAGAACCAAAGCAACACTGCCCAAAATGATACAGACAAACATTCCTGTGGTGTGGGTGTGGCAGAAGAACCTTTATCATGCTTACCGTGCCATCCTACATCTGTTACATTAAACTAAAGTGTTCATATGAGAACTTAGGTTGTCATTTATTTTTGTTTACTATAGGTTAATACTATCATATTTAAGCATAGGCACGGATTTATTTTGGCATTTTAACAGTCGAAAACACCATGTCAGTGGGTACTAACTCTGTTCATAAATTATTTCCATACAGGAGAGAAGGGTATAAAGCTCGGAGATGGCTTGACAACGGGCTTAGGATAGGGTTACAATGCCTCTTTTACTCATTGAAGTGGTAACCTAAAAAGAAAGAAAGGAATGTACATAGAGCAGTTTGTTTTCTGGCAAAACCAAATTTGCTCCTCCTTATAATAGCAACATCAAAGTGAACTGTCAAAATGTGCCTGGCATTAAAATGGCTGTGTCGCAACATCATCTACCCATAGGAAGTGTTAAGAGATAAGATCCAACAGGTAGATCAGAGCCAAATAGCATCTGTCTATGGAGTACACTATAATTAATTCTATAGGATAAAAGTAATTACTGGGATTTTGTCAGGGGGGCACTATAGTGGAAGTGGTGTTTCGGAAAGATTAATTTAATCCATACCAGGATAGTTTAGAGTGTGTAGATTATAAAGTAAAAGGTCAGTTAATAACCTGTTATCATTATCTAGGATTAAAATAAATGTCATAGAGGGAGCAGACAATGGAAATGAGAAGAGCTATATTCAAACATTGAAAATACAGGATCAAGACAATTACTATACAATAGAGATGACAACAGCAAGGAATAGTAAACAGAACATTCAGGTTTGCTTTTGCTCATATGAATATAAATTCAAATCTAGGCAACCCAGAGCTGATGCAGTTGCTTAAAGTTACTCTCAGGGACTTGGGTTCAATCTGCTTTCCAGACAGGAATGGGGGAAAGGGGAAAGAGTTAGAACAAGCAGCATTGGTCCCGTTTATCAAGAAAGGAAAATAATTACACTAAATTGTTTTAAAC 4 . ID=chr18-67453984-INS-20383;SVTYPE=INS;SVLEN=20383;TIG_REGION=h1tg002432l:82506-102888,h2tg000739l:55903-76402;QUERY_STRAND=+,+;HOM_REF=0,1;HOM_TIG=0,1;AC=2 GT:SUPP 1/1:1 chr18 67682314 chr18-67682315-INS-71;pbsv.INS.1080 C CATACCTACAACCAACTGATCTCCAAAAAAGTTGACCAAAAAAAAAAACAAAAAAAAAAAAAAAAACAACAT 4 PASS ID=chr18-67682315-INS-71;SVTYPE=INS;SVLEN=71;TIG_REGION=h1tg014744l:70606-70676,h2tg008272l:70606-70676;QUERY_STRAND=+,+;HOM_REF=0,1;HOM_TIG=0,1;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=458.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 chr18 67740193 pbsv.INS.1081 C CTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=28;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,0,3:4 -chr18 67773278 chr18-67773279-DEL-163 AAATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATTCCTGGAGATAAACTGATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATTCCTGGAGATAAACTGATAGATAGATAGATAGATAGATAGATAGATAGAT A 4 . ID=chr18-67773279-DEL-163;SVTYPE=DEL;SVLEN=-163;TIG_REGION=h1tg014744l:161672-161672,h2tg008272l:161666-161666;QUERY_STRAND=+,+;HOM_REF=0,35;HOM_TIG=0,35;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=459.0 GT:DR:DV:GQ:SUPP 0/1:2:4:8:3 +chr18 67773278 chr18-67773279-DEL-163 AAATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATTCCTGGAGATAAACTGATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATTCCTGGAGATAAACTGATAGATAGATAGATAGATAGATAGATAGATAGAT A 4 . ID=chr18-67773279-DEL-163;SVTYPE=DEL;SVLEN=-163;TIG_REGION=h1tg014744l:161672-161672,h2tg008272l:161666-161666;QUERY_STRAND=+,+;HOM_REF=0,35;HOM_TIG=0,35;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=459.0 GT:DR:DV:GQ:SUPP 1/1:2:4:8:3 chr18 67773383 pbsv.DEL.1082 TAGATAGATTCCTGGAGATAAACTGATAGATAGATAGATAGATAGATAGATAGATAGATAATAGATAGATAGATAGATAGATAGATAGATAGATTCCTGGAGATAAAGTGATAGATGGATGGATAGATAGATAGATAGATAGACAGATAGATTCCTGGAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGATAGATAGATTCCTGGAGATAA T 2 PASS SVTYPE=DEL;SVLEN=-224;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 67773427 Sniffles2.DEL.34ES11 GATAGATAGATAGATAATAGATAGATAGATAGATAGATAGATAGATAGATTCCTGGAGATAAAGTGATAGATGGATGGATAGATAGATAGATAGATAGACAGATAGATTCCTGGAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGATAGATAGATTCCTGGAGATAAACTGATAGATGGATAGATAGATG G 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-203;SUPPORT=2;COVERAGE=6,6,6,6,6;STRAND=+-;AF=0.333;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:8:4:2:2 -chr18 67773560 chr18-67773561-DEL-73 TAGATAGATAGATAGATAGATGATAGATAGATAGATTCCTGGAGATAAACTGATAGATGGATAGATAGATGATA T 4 . ID=chr18-67773561-DEL-73;SVTYPE=DEL;SVLEN=-73;TIG_REGION=h1tg014744l:161791-161791,h2tg008272l:161785-161785;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=459.1 GT:DR:DV:GQ:SUPP 0/1:2:4:8:3 +chr18 67773560 chr18-67773561-DEL-73 TAGATAGATAGATAGATAGATGATAGATAGATAGATTCCTGGAGATAAACTGATAGATGGATAGATAGATGATA T 4 . ID=chr18-67773561-DEL-73;SVTYPE=DEL;SVLEN=-73;TIG_REGION=h1tg014744l:161791-161791,h2tg008272l:161785-161785;QUERY_STRAND=+,+;HOM_REF=0,0;HOM_TIG=0,0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=459.1 GT:DR:DV:GQ:SUPP 1/1:2:4:8:3 chr18 67855559 pbsv.DEL.1083 CATATATATATATATATATATATATAT C 2 PASS SVTYPE=DEL;SVLEN=-26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,8,2:4 chr18 67884868 pbsv.INS.1084 A ATATATATATATATATATATATATATATATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=45;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,3,2:4 chr18 67884885 chr18-67884886-INS-52 A ATATATTATATATATATATATATTATATATATATATATTATATATATATATAT 4 . ID=chr18-67884886-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h2tg016092l:206493-206544;QUERY_STRAND=-;HOM_REF=0,5;HOM_TIG=0,5;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=460.0 GT:DR:DV:GQ:SUPP 0/1:3:2:11:3 @@ -1435,18 +1435,18 @@ chr18 68396626 pbsv.DEL.1094 GTTTCAACACAGGCTGTGTTGAAAAAAATCTTTTACGTAGTAGAACACA G chr18 68408503 pbsv.INS.1095 A AAAAATATTAAAATTATAATATAAATTAT 2 PASS SVTYPE=INS;SVLEN=28;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:2,6,0,1:4 chr18 68469731 pbsv.DEL.1096 AAGAAAGAAAAGAGAAGAGAGGAGAAGAGAGGAGAAGAG A 2 PASS SVTYPE=DEL;SVLEN=-38;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,0,2:4 chr18 68530365 pbsv.DEL.1097 ATATATACACACACACATATATATGTGTATATATATACATATACAC A 2 PASS SVTYPE=DEL;SVLEN=-45;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,3,2:4 -chr18 68536595 chr18-68536596-DEL-2178 AGCCCAGCCAGCTTAGCACTTTTAAGAAAATGTTTTTCTTTAGATTTTTAAAAATTCTAATATACAACAAACACTCATGCTATCTCTGTAAGTCCCAGTAATAGCAGTAAGACACACCACATAAGCCACTTTGAATCAAAGAAGATTCATATAATAATTTTGGGATTTTTCTATCTTTATCCCTTTGTGGTAATCAAGTTTTCTGGGTATAAAATTTAGTTCTTATTTTCAAGTGGTTTTCCATTAATTTGGAGGATCACTAAACTTCAGATTATTTTATTTTTTCCTGTTATATTAAACTTACACAGAGAACACTTTGTGGGGTTCTGGAGCTTGTTTGTGTTGGCTGCTAAGAGATGATTATTAAATCATCAGGAATTTTGCAAGCTGGTTCTTAGATACTTAGTAGCTGAAATTGGCCATGATGGGAGTATTGATATCGCAGAAATCAGCAAATCTATAAATTAGAGCCCTCCTCACACACCATGGTGCTTAAACATGTACTAGTATGTCACTGACCAATTCATTCCCTTTGTGAGATGTTTCATCCAGGCACATGCCTGGAGTAGGAGTTCAGCACAGACTATCAGAATGGCCTGCACTCAGGCGCTACTGCTGTAGTACAGGCCACTTTCCTACCCAAAGAAACGCTGACTCCTCAATAAGCTTCTGTATTCGTTTGTTCTCACACTGCTGAGTCCCAGTAACAGCAATGTACAATAGCAATAGTACATGTTTAAGCACCACTGGATGAGGGGGGGCTCCAATTCGTAGGTTTCCTAATTTGCTAATTTCTGTGATATCAATAGTCTCATCAGGGACGATTTCAACTACTAAGTATCTAACAACCAGCTTGCAATATTCCTGATAATTTAAGACCCAGGACTCGGTAATTTGTAAAGGAAAAAGGTTTAATTGACTCACAGTTCCACATGGCTGGGGAGGCCTCACCATCAAGGCAGAAAGTACAGGGGAAGCAAGTCACTTCTTCCATGGCAGCAGGCAAGAGAGGGTTTGTACAGGGGAACTCCCATTTACAAAACCATCAGATCTCGTGAGACTTATTTACTACCAGGAGAACAGTATGGGGGAAGCTGCCCTCATTATTCAATTATCTCCACCTGGCCTCACCCTTGACAGGTGGAGAGCATTACAACTCAAGGTGAGATCTGGGTGAGGGCACAGCCTAACCAATCAACCACTGGGCTATTCTCCAAGGTTGATTTGGAATCAAGCAATGCTTCCCCAAACTCAATTCTCTGGTGCTGACTCCTTATATCTTTTGTGCCTTTATATGGGTGACACTGGAGGCTGACATTGGAAAAGAAATCTAGTACATTATTTAGAGGTAAGATGCTAACTAGACATACCTAGAGTTCCTCAGTCAGAAAGATCTTTGCGAACATTCTCATAAGATGTGATGCCTGAGACACTAGCCTCCACTGTCACGACACCCAGCAAAATTTCAATTGCATCCTAGGTAGAATAGAGTCTTGGGACAACACAGCCAGGAATTCCCAAGTATCCATAAATATAAAACAAGAAAGAATATCGTACTAACAGGATGTGGGCTTTCTGTATTCTTTAAAATAAAATAAAATAGGTCTAATCCTTCAATTCAAACACTGACATGTAATTCTGTTCTTTTTTAATATGTTTATATTTTTGGATCAATTTTTGACAGAAACATATTTTTGTCAGTCTATGTATGAGCCATTAAAACTAAAGGGGTAGAAAACAGTGATATTTATTACCTTGATTTCTGTTGACAGAATAAAGATGTTTCAGCACATTTTAAAAATAAATTTTATCACTTTGATAATTTCTCTGTATAATCCATTTGGCTTCTATTTTGTCTTTGAGAGGTTTCTGGTACAAATTTATGAGGTACGTGTGCAATTTTGTTACATGCATGGATTGCATAATCCTCAAGTCTGAGCTTTGATGGTATCCATCACCCTCATAACGTACATTGTACCCATTAACCTATTTTCATCATCCATCTCACTGCACCCACACTTTAGTATTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTTCAGTGGCACAATCTCGGCTCATTGCAACCTCCGTCTCCCAGATTTAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTAGCCACTGC A 4 . ID=chr18-68536596-DEL-2178;SVTYPE=DEL;SVLEN=-2178;TIG_REGION=h1tg020309l:9600-9600,h2tg012637l:120063-120063;QUERY_STRAND=+,+;HOM_REF=0,42;HOM_TIG=0,155;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=464.0 GT:DR:DV:GQ:SUPP 0/1:2:5:6:3 +chr18 68536595 chr18-68536596-DEL-2178 AGCCCAGCCAGCTTAGCACTTTTAAGAAAATGTTTTTCTTTAGATTTTTAAAAATTCTAATATACAACAAACACTCATGCTATCTCTGTAAGTCCCAGTAATAGCAGTAAGACACACCACATAAGCCACTTTGAATCAAAGAAGATTCATATAATAATTTTGGGATTTTTCTATCTTTATCCCTTTGTGGTAATCAAGTTTTCTGGGTATAAAATTTAGTTCTTATTTTCAAGTGGTTTTCCATTAATTTGGAGGATCACTAAACTTCAGATTATTTTATTTTTTCCTGTTATATTAAACTTACACAGAGAACACTTTGTGGGGTTCTGGAGCTTGTTTGTGTTGGCTGCTAAGAGATGATTATTAAATCATCAGGAATTTTGCAAGCTGGTTCTTAGATACTTAGTAGCTGAAATTGGCCATGATGGGAGTATTGATATCGCAGAAATCAGCAAATCTATAAATTAGAGCCCTCCTCACACACCATGGTGCTTAAACATGTACTAGTATGTCACTGACCAATTCATTCCCTTTGTGAGATGTTTCATCCAGGCACATGCCTGGAGTAGGAGTTCAGCACAGACTATCAGAATGGCCTGCACTCAGGCGCTACTGCTGTAGTACAGGCCACTTTCCTACCCAAAGAAACGCTGACTCCTCAATAAGCTTCTGTATTCGTTTGTTCTCACACTGCTGAGTCCCAGTAACAGCAATGTACAATAGCAATAGTACATGTTTAAGCACCACTGGATGAGGGGGGGCTCCAATTCGTAGGTTTCCTAATTTGCTAATTTCTGTGATATCAATAGTCTCATCAGGGACGATTTCAACTACTAAGTATCTAACAACCAGCTTGCAATATTCCTGATAATTTAAGACCCAGGACTCGGTAATTTGTAAAGGAAAAAGGTTTAATTGACTCACAGTTCCACATGGCTGGGGAGGCCTCACCATCAAGGCAGAAAGTACAGGGGAAGCAAGTCACTTCTTCCATGGCAGCAGGCAAGAGAGGGTTTGTACAGGGGAACTCCCATTTACAAAACCATCAGATCTCGTGAGACTTATTTACTACCAGGAGAACAGTATGGGGGAAGCTGCCCTCATTATTCAATTATCTCCACCTGGCCTCACCCTTGACAGGTGGAGAGCATTACAACTCAAGGTGAGATCTGGGTGAGGGCACAGCCTAACCAATCAACCACTGGGCTATTCTCCAAGGTTGATTTGGAATCAAGCAATGCTTCCCCAAACTCAATTCTCTGGTGCTGACTCCTTATATCTTTTGTGCCTTTATATGGGTGACACTGGAGGCTGACATTGGAAAAGAAATCTAGTACATTATTTAGAGGTAAGATGCTAACTAGACATACCTAGAGTTCCTCAGTCAGAAAGATCTTTGCGAACATTCTCATAAGATGTGATGCCTGAGACACTAGCCTCCACTGTCACGACACCCAGCAAAATTTCAATTGCATCCTAGGTAGAATAGAGTCTTGGGACAACACAGCCAGGAATTCCCAAGTATCCATAAATATAAAACAAGAAAGAATATCGTACTAACAGGATGTGGGCTTTCTGTATTCTTTAAAATAAAATAAAATAGGTCTAATCCTTCAATTCAAACACTGACATGTAATTCTGTTCTTTTTTAATATGTTTATATTTTTGGATCAATTTTTGACAGAAACATATTTTTGTCAGTCTATGTATGAGCCATTAAAACTAAAGGGGTAGAAAACAGTGATATTTATTACCTTGATTTCTGTTGACAGAATAAAGATGTTTCAGCACATTTTAAAAATAAATTTTATCACTTTGATAATTTCTCTGTATAATCCATTTGGCTTCTATTTTGTCTTTGAGAGGTTTCTGGTACAAATTTATGAGGTACGTGTGCAATTTTGTTACATGCATGGATTGCATAATCCTCAAGTCTGAGCTTTGATGGTATCCATCACCCTCATAACGTACATTGTACCCATTAACCTATTTTCATCATCCATCTCACTGCACCCACACTTTAGTATTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTTCAGTGGCACAATCTCGGCTCATTGCAACCTCCGTCTCCCAGATTTAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTAGCCACTGC A 4 . ID=chr18-68536596-DEL-2178;SVTYPE=DEL;SVLEN=-2178;TIG_REGION=h1tg020309l:9600-9600,h2tg012637l:120063-120063;QUERY_STRAND=+,+;HOM_REF=0,42;HOM_TIG=0,155;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=464.0 GT:DR:DV:GQ:SUPP 1/1:2:5:6:3 chr18 68538713 pbsv.DEL.1098 ATTTAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTAGCCACTGCGCCCAGCCAGCTTAGCACTTTTAAGAAAATGTTTTTCTTTAGGTTTTTAAAAATTCTAATATACAACAAACACTCATGCTATCTCTGTAAGTCCCAGTAAAGCAGTAAGACACACTACATAAGCCACTTTGAATCAAAGAAGATTCATATAATAATTTTGGGATTTTTCTATCTTTATCCCTTTGTGGTAATCAAGTTTTCTGGGTATAAAATTTAGTTCTTATTTTCAAGTGGTTTTCCATTAATTTGGAGGATCACTAAACTTCAGATTATATTATTTTTTCCTGTTATATTAAACTTACACAGAGAACACTTTGAGTGGGATTCTGGAGCTTGTTTGTATTGGCTGCTAAGAGATGATTATTAAATCATCAGGAATTTTGCAAGCTGGTTCTTAGATACTTAGTAGCTGAAATTGGCCATGATGGGAGTATTGATATCGCAGAAATCAGCAAATCTATAAATTAGAGCCCTCCTCACACACCATGGTGCTTAAACATGTACTAGTATGTCACTGACCAATTCATTCCCTTTGTGAGATGTTTCATCCAGGCACATGCCTGGAGTAGGAGTTCAGCACAGACTATCAGAATGGCCTGCACTCAGGCGCTACTGCTGTAGTACAGGCCACTTTCCTTCCCAAAGAAACGCTGACTCCTCAATAAGCTTCTGTATTCGTTTGTTCTCACACTGCTGAGTCCCAGTAACAGCAATGTACAATAGCAATAGTACATGTTTAAGCACCACTGGATGAGGGGGGGCTCCAATTCGTAGGTTTCCTAATTTGCTAATTTCTGTGATATCAATAGTCTCATCAGGGACGATTTCAACTACTAAGTATCTAACAACCAGCTTGCAATATTCCTGATAATTTAAGACCCAGGACTCGGTAATTTGTAAAGGAAAAAGGTTAATTGACTCACAGTTCCACATGGCTGGGGAGGCCTCACCATCAAGGCAGAAAGTACAGGGGAAGCAAGTCACTTCTTCCATGGCAGCAGGCAAGAGAGGGTTTGTACAGGGGAACTCCCATTTACAAAACCATCAGATCTCGTGAGACTTATTCACTACCAGGAGAACAGTATGGGAGAAGCTGCCCTCATTATTCAATTATCTCCACCTGGCCTCACCCTTGACAGGTGGAGAGCATTACAACTCAAGGTGAGATCTGGGTGAGGGCACAGCCTAACCAATCAACCACTGGGCTATTCTCCAAGGTTGATTTTGAATCAAGCAATGCTTCCCCAAACTCAATTCTCTGGTGCTGACTCCTTATATCTTTTATGCCTTTATATGGGTGACACTGGAGGCTGACATTGGAAAAGAAATCTAGTACATTATTTAGAGGTAAGATGCTAACTAGACATACCTAGAGTTCCTCAGTCAGAAAGATCTTTGCGAACATTCTCATAAGATGTGATGCCTGAGACACTAGCCTCCACTGTCACGACACCCAGCAAAATTTCAATTGCATCCTAGGTAGAATAGAGTCTTGGGACAACACAGCCAGGAATTCCCAAGTATCCATAAATATAAAACAAGAAAGAATATAGTACTAACAGGATGTGGGCTTTCTGTATTCTTTAAAATAAAATAAAATGGGTCTAATCCTTCAATTCAAACACTGACATGTAATTCTGTTCTTTTTTAATATGTTTATATTTTTGGATCAATTTTTGACAGAAACATATTTTTGTCAGTCTATGTATGAGCCATTAAAACTAAAGGGGTAGAAAACAGTGATATTTATTACCTTGATTTCTGTTGACAGAATAAAGATGTTTCAGCACATTTTAAAAATAAATTTTATCACTTTGATAATTTCTCTGTATAATCCATTTGGCTTCTATTTTGTCTTTGAGAGGTTTCTGGTACAAATTTATGAGGTACGTGTGCAATTTTGTTACATGCATGGATTGCATAATCCTCAAGTCTGAGCTTTGATGGTATCCATCACCCTCATAACGTACATTGTACCCATTAACCTATTTTCATCATCCATCTCACTGCACCCACACTTTAGTATTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCACCCAGGCTGGAGTTCAGTGGCACAATCTCGGCTCATTGCAACCTCCGTCTCCCAGGTTTAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTAGCCACTGCGCCCAGCCAGCTTAGCACTTTTAAGAAAATGTTTTTCTTTAGGTTTTTAAAAATTCTAATATACAACAAACACTCATGCTATCTCTGTAAGTCCCAGTAAAGCAGTAAGACACACTACATAAGCCACTTTGAATCAAAGAAGATTCATATAATAATTTTGGGATTTTTCTATCTTTATCCCTTTGTGGTAATCAAGTTTTCTGGGTATAAAATTTAGTTCTTATTTTCAAGTGGTTTTCCATTAATTTGGAGGATCACTAAACTTCAGATTATATTATTTTTTCCTGTTATATTAAACTTACACAGAGAACACTTTGAGTGGGATTCTGGAGCTTGTTTGTATTGGCTGCTAAGAGATGATTATTAAATCATCAGGAATTTTGCAAGCTGGTTCTTAGATACTTAGTAGCTGAAATTGGCCATGATGGGAGTATTGATATCGCAGAAATCAGCAAATCTATAAATTAGAGCCCTCCTCACACACCATGGTGCTTAAACATGTACTAGTATGTCACTGACCAATTCATTCCCTTTGTGAGATGTTTCATCCAGGCACATGCCTGGAGTAGGAGTTCAGCACAGACTATCAGAATGGCCTGCACTCAGGCGCTACTGCTGTAGTACAGGCCACTTTCCTTCCCAAAGAAACGCTGACTCCTCAATAAGCTTCTGTATTCGTTTGTTCTCACACTGCTGAGTCCCAGTAACAGCAATGTACAATAGCAATAGTACATGTTTAAGCACCACTGGATGAG A 2 PASS IMPRECISE;SVTYPE=DEL;SVLEN=-2992;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,7:8:0,1,5,2:4 -chr18 68554081 chr18-68554082-DEL-323;pbsv.DEL.1099 TAAAAAGTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCGGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA T 4 PASS ID=chr18-68554082-DEL-323;SVTYPE=DEL;SVLEN=-323;TIG_REGION=h1tg020309l:24910-24910;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;SVANN=ALU;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=465.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:4:1:7 +chr18 68554081 chr18-68554082-DEL-323;pbsv.DEL.1099 TAAAAAGTGTTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCGGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAA T 4 PASS ID=chr18-68554082-DEL-323;SVTYPE=DEL;SVLEN=-323;TIG_REGION=h1tg020309l:24910-24910;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,2;SVANN=ALU;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=465.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:1:4:1:7 chr18 68585636 pbsv.DEL.1100 AATATATATATATATATATATAT A 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,17:17:0,0,9,8:4 chr18 68626794 pbsv.DEL.1101 AGATGGGATGGGATGGGATGG A 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:2,3,0,1:4 -chr18 68731924 chr18-68731925-INS-317 T TAAAACTGAACACATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA 4 . ID=chr18-68731925-INS-317;SVTYPE=INS;SVLEN=317;TIG_REGION=h1tg009735l:121072-121388;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=466.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,3,2:7 +chr18 68731924 chr18-68731925-INS-317 T TAAAACTGAACACATGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAA 4 . ID=chr18-68731925-INS-317;SVTYPE=INS;SVLEN=317;TIG_REGION=h1tg009735l:121072-121388;QUERY_STRAND=-;HOM_REF=0,14;HOM_TIG=0,14;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=466.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,5:5:.:5:13:0,0,3,2:7 chr18 68762524 pbsv.INS.1103 A ACCCCCCCCCCCCCCCCCCCCCC 2 PASS SVTYPE=INS;SVLEN=22;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:3,4,0,1:4 chr18 68857107 Sniffles2.DEL.358S11 ATATATAAATATATTTATATATTTTTATATATTATATATAAATATATTTATATATTTTTATATAAT A 0 PASS IMPRECISE;SVTYPE=DEL;SVLEN=-65;SUPPORT=3;COVERAGE=7,8,8,8,7;STRAND=+-;AF=0.375;STDEV_LEN=0.577;STDEV_POS=25.403;AC=1 GT:GQ:DR:DV:SUPP 0/1:16:5:3:2 chr18 68857163 pbsv.DEL.1104 TTTATATAATATATAAAAATATATTTATATATTT T 2 PASS SVTYPE=DEL;SVLEN=-33;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:1,2,2,3:4 chr18 68857165 pbsv.DEL.1105 TATATAATATATAAAAATATATTTATATATTTTTATATAATATATAAAAATATATTTATATATTTTTATATATAAATATATATTTATTATTTAA T 2 PASS SVTYPE=DEL;SVLEN=-93;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:2,3,1,2:4 chr18 68873815 pbsv.DEL.1106 TACATAGCTTAAAATATATGTCAATACAACAAA T 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,5:10:4,1,2,3:4 -chr18 68905256 chr18-68905257-INS-333;pbsv.INS.1107 T TGAAATTATTTTTTTTTATTTTTATTTTTATTTATTTATTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGACGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGTCTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 4 PASS ID=chr18-68905257-INS-333;SVTYPE=INS;SVLEN=333;TIG_REGION=h2tg010478l:80988-81320;QUERY_STRAND=-;HOM_REF=0,8;HOM_TIG=0,8;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=468.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:4:11:7 +chr18 68905256 chr18-68905257-INS-333;pbsv.INS.1107 T TGAAATTATTTTTTTTTATTTTTATTTTTATTTATTTATTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGTCGGACTGCGGACTGCAGTGACGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGTCTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTTTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC 4 PASS ID=chr18-68905257-INS-333;SVTYPE=INS;SVLEN=333;TIG_REGION=h2tg010478l:80988-81320;QUERY_STRAND=-;HOM_REF=0,8;HOM_TIG=0,8;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=468.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:4:11:7 chr18 68956397 chr18-68956398-INS-53;pbsv.INS.1108 T TAAATATATTATTTTATATTATATTTTATTTTATTTATATTATTTTATATTATA 4 PASS ID=chr18-68956398-INS-53;SVTYPE=INS;SVLEN=53;TIG_REGION=h1tg024302l:4056-4108,h2tg010478l:29763-29815;QUERY_STRAND=-,-;HOM_REF=0,9;HOM_TIG=0,9;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=469.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:10:27:7 chr18 69243926 pbsv.DEL.1109 GAATAAAATAAAATAAAATAAAATAAAATAA G 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,3,3:4 chr18 69384220 pbsv.DEL.1110 ATATATATATATATGTATATATATATATATATATATG A 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,5:9:0,4,3,2:4 @@ -1456,13 +1456,13 @@ chr18 69463361 pbsv.DEL.1113 CTCTCCCTTCAGAAGGAGCCCTTGGGAGTGCTCTT C 2 PASS SVTYPE chr18 69606273 pbsv.DEL.1114 AAAATAAATAAATAAATAAATAAATAAATAAAT A 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:2,8:10:0,2,4,4:4 chr18 69611495 pbsv.DEL.1115 TACACACACACACACACACACAC T 2 PASS SVTYPE=DEL;SVLEN=-22;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 chr18 69612457 pbsv.INS.1116 G GGGCGCATGTGTGCGAGGGCGCATGTGTGCGAGGGCGCATGTGTGCGAGGGCGCATGTGTGCGAGGGCGCATGTGTGCGAGGGGGCTCATGTGTGCGAG 2 PASS SVTYPE=INS;SVLEN=98;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:4,3,0,1:4 -chr18 69616406 chr18-69616407-DEL-81;pbsv.DEL.1117 CCTTCTCTAAGTCAACCAAGCAGATTTTTCCTAAGGTCAACCAAGCTCCAGAAAGCAACTTTAGAACTAACTACTAGATGTG C 4 PASS ID=chr18-69616407-DEL-81;SVTYPE=DEL;SVLEN=-81;TIG_REGION=h1tg016304l:64056-64056,h2tg015782l:64056-64056;QUERY_STRAND=+,+;HOM_REF=0,30;HOM_TIG=0,30;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=471.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:7:.:7 +chr18 69616406 chr18-69616407-DEL-81;pbsv.DEL.1117 CCTTCTCTAAGTCAACCAAGCAGATTTTTCCTAAGGTCAACCAAGCTCCAGAAAGCAACTTTAGAACTAACTACTAGATGTG C 4 PASS ID=chr18-69616407-DEL-81;SVTYPE=DEL;SVLEN=-81;TIG_REGION=h1tg016304l:64056-64056,h2tg015782l:64056-64056;QUERY_STRAND=+,+;HOM_REF=0,30;HOM_TIG=0,30;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=471.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:2:7:.:7 chr18 69617707 pbsv.INS.1118 A AAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2 PASS SVTYPE=INS;SVLEN=46;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,7:9:1,1,4,3:4 chr18 69617726 Sniffles2.INS.14CS11 A AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3 PASS PRECISE;SVTYPE=INS;SVLEN=51;SUPPORT=3;COVERAGE=8,8,8,7,7;STRAND=+-;AF=0.375;STDEV_LEN=2.887;STDEV_POS=12.423;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:16:5:3:2 chr18 69647058 pbsv.DEL.1119 CCTATCTGTCTATCCCATCTGTCTATCCTAT C 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,4:6:1,1,4,0:4 chr18 69653857 pbsv.INS.1120 C CATAATGTTTCAAACATCTCT 2 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:3,1,2,0:4 chr18 69659916 pbsv.DEL.1121 ATATAACATATATGTATGTTTTATATATATAACATATATGTATGTTT A 2 PASS SVTYPE=DEL;SVLEN=-46;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:4,0,3,0:4 -chr18 69760697 chr18-69760698-INS-100;pbsv.INS.1122 A ATCTAGTAGGAGCCTGCCTTTCCCGGGGGCCGGCTGTGACCAATTATTACTACTCCTGAAATCTTATTGGGAAGCTGCTGATCAGTTTCAGGTGTTTTCTG 4 PASS ID=chr18-69760698-INS-100;SVTYPE=INS;SVLEN=100;TIG_REGION=h1tg005836l:105478-105577;QUERY_STRAND=+;HOM_REF=0,32;HOM_TIG=0,32;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=473.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:5:6:7 +chr18 69760697 chr18-69760698-INS-100;pbsv.INS.1122 A ATCTAGTAGGAGCCTGCCTTTCCCGGGGGCCGGCTGTGACCAATTATTACTACTCCTGAAATCTTATTGGGAAGCTGCTGATCAGTTTCAGGTGTTTTCTG 4 PASS ID=chr18-69760698-INS-100;SVTYPE=INS;SVLEN=100;TIG_REGION=h1tg005836l:105478-105577;QUERY_STRAND=+;HOM_REF=0,32;HOM_TIG=0,32;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=473.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:5:6:7 chr18 69768954 pbsv.INS.1123 C CGTGTGTGTGTGTGTGTGTGT 2 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,7:10:2,1,3,4:4 chr18 69811554 pbsv.DEL.1124 ATATATATATATATATATATATATC A 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,5,5:4 chr18 69828884 pbsv.INS.1125 G GTATATATATATATATATATATATATATATA 2 PASS SVTYPE=INS;SVLEN=30;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 @@ -1477,7 +1477,7 @@ chr18 70460906 pbsv.INS.1131 T TTATTTTATAAAAATAAAACTTTTATTTTTAAAAATAAAACTTTTATTT chr18 70460967 chr18-70460968-INS-56 G GTTTTATTTTCATTTTATAAAAATAAAAGTTTTATTTTCATTTTATAAAAATAAAAC 4 . ID=chr18-70460968-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h1tg005319l:11325-11380,h2tg005081l:73818-73873;QUERY_STRAND=-,+;HOM_REF=0,27;HOM_TIG=0,27;AC=2 GT:SUPP 1/1:1 chr18 70460968 Sniffles2.INS.150S11 T TTTTATTTTCATTTTATAAAAATAAAAGTTTTATTTTCATTTTATAAAAATAAAAC 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=77;SUPPORT=7;COVERAGE=7,7,7,7,7;STRAND=+-;AF=1;STDEV_LEN=21.342;STDEV_POS=26.64;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:19:0:7:2 chr18 70465105 pbsv.INS.1133 T TTCTGCCGTGGTGATCAATGTTGGAGCTCAGGAAGCTGAAGTTGTACGCAGCCTGTCCGTGCAGAGCTGAGGCTGTGACGAGAGAAGCCAGCAGCGAACGGGACCGCAGGGCCATCGGAGCAGCAGGGCGGGGGTCGGGGGAGCCCTGCCGCGCCCGGCGTTTGCAGAGTCAGCTTCTGATTGGCCTCGCAGGGCAGAGCGCACACTCCGCACTGTTCGGCCTCCCTAGAGGCCATGGGGAAAGCACTGGTTTTAGGATTGGGGAAGGAAGGCACCAGGCGCTGCGGGAGGGCGAGAGGGAGGTGGAGGCTGCCGGAGTAATGAGCGGCGAGAGCTCGTGAAGCGGGGGGTGCAGGGCGAGTGCAGCGGGGGTGCAGCGCGGGTGCAGGGCGGGTGCAGCGCGGGTGCAGGGCTGATGCTGGGTGGGTGCAGGGCGGGTGCAGCGGGGGTGCAGCGCGGGTGCAGCGCGGGTGCAACGCGGGTGCAGGGCTGATGCAGGGTGGGTGCAGTGCGGGTGCAGGGCGGGTGCAGCGTGGGTGCAGGGCGGGTGCAGCGGGGGTGCAGCGCAGGTGCAGGGCTGATGCAGTGTGGGTGCAGCGGCCTGGCCACCTCCCTGCTCCCAGGGCGTCAGAGCGATTGCCTGAGTCCCTCTGGCAGCAATCAGGTGTGCTCTTGTTCAACAGGGGCTGCAATCGCCCCAACCTGTCCCTCCTGCCCCCGGCTCCTCCTGGAGCCCTGACCAGGGAGATCAGCAAAGTCTCCTTTTGATTTACTGCCTCTTCCCTCCATCCTGGCATCCAGGAGGGACGGAGTGAGCAGTGGGTGAGCTCTCAAGAGTGGGGCCTGGAGATGCAAGGCGGGCAGATGGGCCGGCGGGGGCAGATTTCACATGAATAGATTTTACTTTGCAGCGGAGTGAGTGGCACGAATGGCAAATTGATTCTTAAAATATTTTGAGAGACTGGTATTATACCAAGGTGTAGGACTGACCACAAACATCGGGTTAGTTACCAGATACTAGACATGTTTAGAGGAAATTGTAACATTCCTACTTCCTGATATTACTTTTACTAGGGATGTCTTCCATAAAAAACAAACAAATAAGCATTGATTTTTCCCATTACAAAAGCAATACATGCTTATTACTGAGTATTTGAAAAACACAGATGAATATAACCAAGCAAACAAAAGTCATTCAATAGTCCATGAAAGAGAGGTAACAACTGTTAATATGTTAGAAGTATTCTCTTCTATTATTTTTGGAACACATATTTATACTTAATATAATATTTGAGATATAGCACATATTGAGATTTTAGATCTTGATTTTCATTAAACAATTTTATTAAAATATGATTTACAGGCTGGGAGCGGTGGCTCATGCCTGTAATCCAAGCACTTTGGGAGGATGAGGCAGGTGGAGCACCTGAGGTTAGGAGATGGATACTAGCCTGGCCAAAATGGCAAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCACTGTGGCAAACACTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCCGGAGGCAGAGGTTGTAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCTGCCTCAAAAAATATATATATATATACATATATACATAATTTACGCACCACAATATCCACAATCGTAAATGTACAATTCAATTATTTTTAGTAAGTGTTTGTTTAAACTTGTGCAAACATCACCACAATCCAGTTTGGGACAAGTTCCCTCCTCCAAGTGTAACCTCCTGCCCATTGCAACCACACTCAGCCCTAGATAACCACTGATGTGCTTTTAGTGTCTACAAATTTGCCTTTTTTGGACATTTTAGATAAATGTAGCTTTTGTGTCTGGCTTCATTTGCTTAGCTTATGTTTTTGAGAATCATCCATGTTGTAGTGTGGATCGGTAGTTTATTTTATTTTATTTTATTTATTTATTTTTTATTTTTTGAGACAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTAGTAAGATGAGGACTCGCTGCAGCCTCTACCTCCTGGGCTCGAGTGATCCTCCCACCTCAGCCTCCCAAGCAGTTGCAATTACAGGCATGCCACCAGGCCTGGCTAATTTTTAAATTTTTTGTAGGGATGGGTTCCCTCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGCGATCCTCCCTCCTTGACCTCTCAAAGTGTTGGGATTACAGACATGAGTCACAGTGCTTGTCCTCATTTTTATTGCAGAATAGTATTCCACTGTTTGGATATGACACATTTTGCTTACCCATTCACCTGTTTTTGGTTATTATGAATACTGTTGCTATGAACATTCATGTACATGTGTTTGTATGGACACATATTTTCATTTCTATTGGGTAAAATTCTAGGGGTTGAATTGCTGGGTTGTATAGTAAATTTGTTTAACTTTTTAAGAAATTGCCAGACTGTTTTCCAAAGTGGCTACCCCATTTTACATTCCCACCAGCAATGTACGAAGGCTCAAGTTTCTCTATATACTGGTCAACACTTGTTTTTTTTCTATTTTTTGATAATGGCCATTCCAGCATGTGTAGTGGTTCTCAGTGGGGTTTGAATTTGCATTTCTTTAAAGAGTAAGAATATGAAGCATCTTTGTATGTGCTCATTAACCATTCAGATGTCTTGTGAAATGTCTGTTCTAATCTTTTATCCATATAAAAATTGAATTGTTTTCTTATTATTGAATTATAATTCTTTATTCTGGATGCAATTCTTATATGAGAACTGATTTGCAATTATTTTTTTCCCAGTTTGTGACTTGTTTTTTCATTTTCTTAGCACTATCTTTTGAAGTGCAGAAGTTTTTAATTTCAATGAAGCACAATTATTTTTTTCTGTGATGGATCATGCATTTGGTGTTATATCAGAAATTTTTGCCCAACCCAGGGTCACTGTAATTTTTTCTTATGTTTTATTGTAGACATTTTATAGAGTTAGATTTTATAGTAAGATGTATAAGTGATTTTGAATTATTTTTTACATATGGTATGTTTTTGGGTCTCTGTTCATTTTTTTTTTTTTTTTGCATATGGCTATACAATTATCCCAGCACCATTTGTTGAAACGCCTTGGTACCTTTGTCAAAACTCAGTTGGGGGGCTGGGCGTGGTGGCTCATGCCCGTAATCCCAGTGCTTTGGAAGGCCGAGGTGGGCAGATCGCTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCCTGTCTCTACTAAAAATATAAAAATTAGCCAGGTGTGGTGGCACGTGCCTGTAGTCTCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGCAGAGGTTGCAGTGAGCCAAGATGGCCCCATTGCACTCCAGCCTGGCCATTGCAGCATGTATCCATCTCAAAAAAAAAAAAAAAAAATCAGCTGGGCATTAATATAAAGGCTTATTTCTAGCTTCTCTTGATCTATGTTCCTAGCCTTATGCCAGTACCATCCTCTGTTGTTTCTGTGAATTTATCATCATTGTGAAATGGGGTAGTACAAATCTTACAACTTTTTTCTAACCTTTCAAAATTGTTCTGGCTGTTTTAGGTCCTTTACATTAAGAAAATATACAGGATCAGCCTGTCAATTTCTACAATATAACCTGCTATAGTTTTGATAGGGATTTCACTGAATTTACTTATTTTATTGGAACATTTTCTCATGTTTTTATAATTCTGATACTTTTAACTGGGACAGTTTTGGGACATTTATGGTGGGAAGAAGGGAGTTGGGATAAACTTTTAATTTCCCTTTTCATCTCTGCTTTCACTCAATATTTGCTCTATGATACCTATGCAGAGAAGATGGGTCTTTGCAATTGAGAAACTTGTGGCTATAAATTTCTTAGCTGTTAAAATTGTACTGAGTTCTCCCTAGGAGATCCACAGGGTAACCCAGACAAGAACGAGAGGCCAAGGAAATCCTGGAGGGTGGCGATTATGCTGATGGGGCAGTTCATACCAGGAGTGACGACTCCTTATGCCAACAGCAGTGCAGGTTGGCAGGATGACCCTCAGCATGACATGGACACACGCTGCATTACTCGGTGGGCTGGGCAGGCAGCAGTTGCCGTCAAGAAGGCATCTGCCAGATGTGGGGAGGAAGAGCGTTCCAGCCATGACCTGACAAGAAGAAACGTGGGAGGCCACGCACAGCCAAGTGCCCACGGGGTGCTGCACACGGAGCCCAGGAATCGACTCTGGCTTCTTCCGGATCACATGGTTCACGGTGGGGTTTACAGCCCTCATTTCTGATGTTATAAGGTTAGAGGCAGTGACCTTGGGAGAGTTTACACTCAATTTAATTTTTATTGTTTCATGAAATGGAAACTGTTTTCTGTCAGTCAATAAAGCAGCGGGCCTTCTGCTGTATAATGGATGTGGATAAGCGATTGCTGTTTGTTATCACCGTTTAACTGCAGAGACGTCTTATTAGTGGTGATTTTGGAACTCCAGGACTTTTACCAGCCTCAGGGCTAATTCTTTATCCATGTCAGCATCAATGTTGTTACATATAACAGGTTATGGCCACTTCAAAAGGAAGGGAAAGTTCAAAGTCTCTAAAGTTTAAAATGCACTAAAAAGCAAGTGAGCTGAGAGAACTAGAGATCTGAACTAGGGGTCTGAGCCATCAGGAGTTTCAGTGAAAACATGTCTGAACAATCAGCTGAGCAATCAGATGTTCCAGGAAATAATGGCAACTCTAACCTATCAGGTGAAAGAAACATCATCTTAGAACTCAGCTGCATCACAACAGAGAAGCACAATGCTTATGGCAATAATCACTAGTAGTTTAGAGATGGAAAAATGATCGAACGTATTCCTTGCATGTTATGAAAAAAAATCCTAAATATTCCCAATTCCCATTTACCCGTTCAAATTGAGCAGAAGTCCTGTTGAAGTTTACATGAAAGAACGGGATATAAAAGAAATTGTAGCTTGGTTTTCGAAGGCCATAGACACTTCCTCACTCTACTAGTGTAGTATAATAGGAAAGTGGTTTTGCATTCTTGGTCAAAGGCCAACTAAATGCAGAGACGTTGGCCTCAGAAGGGATGAGGATGAGGTCAAAGGTTTTTGAATAGAGGAAGCAGAAAATGCACAAAATTGCTTCCTCAAAGGTGACATGTAGCTTTGAAAAAATACTTTGGGTAAAGAAGTCTGGTGTGGCCCAGTGTGGTGGCTCATACCTATAATCCCAGCACTTTGGGATGCTGAGGTGGGAGGATTGCTTGAGGCCAGGAGTTTGAGACCAGCCCGAGTAACACAGAAATACCCCATCTCTACAACAACAACAACAACAACAAAATTAGCTGGGCGTGGTGGTGCACATCTGTAGTCCCAGCTACTCAAGAGGCTGAGGTGGGAGTGTTGCTTGAACTCAGGAGTTGGAGGCTACAGTGAGCTATGGTCGCATTACTGCACTCCTGCTTGTGTGACAGTGTAAGACCCAGTCTCAACAATAACAAAAGAAGTCCGTGTGTGTGTGTGTGGATGTGTGTCTACAGTGTGTATGTGTGGTGTGTGTGTGTATGTGGTGTGTGTGTGTATGTGTGGTGTGTATGTGTGTATGGTGTGTGTGTATGTGTGTATGTGGTGTGTGGGTGTGTATGTGTAGGGTGTGTGTGGGGTGTGTGGTGTGTGTGTGTATGTGTGGTGGTGTATGTGTGTATGGTGTGTGTGTATGTGTGTATGTGGTGTGTGGGTGTGTATGTGTAGGCTGTGTGTGGGGTGTGTGGTGTGTGTGTATGTGTGTTTGTGGTGTGTATGTGGTGTGTGTGTGTGTGGTGTGTGTATGGTGTATGTGTATGTGTGGTGTGTGTATGTGTGTACGTGTGGTGTGTGTATGTGTGGTGTGTGTGTGTATGTGTGTATGTGTGGTGTATGTGTGGTGTGTATGTATGTGTGTATGTGTGGTGTGTGTGTGTATGTGTGTATGTGTGGTGTGTGTGGTGTGTGTGTGGTGTGTGTGTATGTGGTGTGTTGTGGTGTGTGGCTGTGTGTGTGTACGTGGGGTGTATGTGTGGTGTGTGTATGTGTGTATGTGTGGTGTGTGTATGTGGTGTGTGTGTGGTGTGTGGTGTGTGTGTATGTGTGTATGTGTGGTGTGTGTGTGGTGTGTGGCTGTGTGTGTGTACGTGGTATGTGTGTGTATGTGTGGTGTGTGTATGTGTGGTGTGTGTGTGTATGTGGTGTGTGTGTGGTGTGTGGCTGTGTGTGTGTACGTGGGGTGTGTGTGTATGTGTGGTGTGTGTGTGTATGTGTGTATGTGTGGTGTGTGTGTGGTGTGCGTGTATGTGTGTATGTGGTATGTGTGTGGTGTGTGGCTGCGTATGTGTGGTGTGTGGCTGTGTGTGTGTTGTACGTGGGG 2 PASS SVTYPE=INS;SVLEN=6492;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,1:2:0,1,1,0:4 -chr18 70465190 Sniffles2.INS.151S11 T TATTCTGCCGTGGTGATCAGTGTTGGAGCTCAGGAAGCTGAAGTTGTACGCAGCCTGTCCGTGCAGAGCTGAGGCTGTGACGAGAGAAGCCAGCAGCGAACGGGACCGCAGGGCCATCGGAGCAGCAGGGCGGGGGTCGGGGGAGCCCTGCCGCGCCCGGCGTTTGCAGAATCAGCTTCTGATTGGCCTCGCAGGGCAGAGCGCACACTCTGCACTGTTCGGCCTCCCTAGAGGCCATGGGGAAAGCACTAGTTTTAGGATTGGGGAAGGAAGGCACCAGGCGCTGCGGGAGGGCGAGAGGGAGGTGGAGGCTGCCGGAGTAATGAGCGGCGAGAGCTCGTGAAGCGGGGGTGCAGGGCGAGTGCAGCGGGGGTGCAGCGCGGGTGCAGGGCGGGTGCAGCGCGGGTGCAGGGCTGATGCTGGGTGGGTGCAGGGCGGGTGCAGCGGGGGTGCAGCGCGGGTGCAGGGCTGATGCAGGGTGGGTGCAGTGCGGGTGCAGGGCGGGTGCAGCGCGGGTGCAGAGCCGGTGCAACGCGGGTGCAGGGGTGATGCAGGGTGGGTGCAGTGCGGGTGCAGGGCAGGTGCAGCGTGGGTGCAGGGCGGGTGCAGCGGGGGTGCAGCGCAGGGTGCAGGGCTGATGCAGTGTGGGTGCAGCGGCCTGGCCACCTCCCTGCTCCCAGGGCGTCAGAGGGATTGCCTGAGTCCCTCTGGCAGCAATCAGGTGTGCTCTTGTTCAACAGGGGCTGCAATCGCCCCAACCTGTCCCTCCTGCCCCCGGCTCCTCCTGGAGCCCTGACCAGGGAGATCAGCAAAGTCTCCTTTTGATTTACTGCCTCTTCCCTCCATCCTGGCATCCAGGAGGGGCGGAGTGAGCAGTGGGTGAGCTCTCAAGAGTGGGGCCTGGAGATGCAAGGCGGGCAGATGGGCCGGCGGGGGCAGATTTCACATGAATAGATTTTACTTTGCAGCGGAGTGAGTGGCACGAATGGCAAATTGATTCTTAAAATATTTTGAGGGACTGGTATTATACCAAGGTGTAGGACTGACCACAAACATCGGGTTAGTTACCAGATACTAGACATGTTTACAGGAAATTGTAACATTCCTACTTCCTGATATTACTTTTACTAGGGATGTCTTCCATAAAAAACAAACAAATAAGCATTGATTTTTCCGATTACAAAAGCAATACATGCTTATTACTGAGTATTTGAAAAACACAGATGAATATAACCAAGCAAACAAAAGTCATTCAATAGTCCATGAAAGAGAGGTAACAACTGTTAATATGTTAGAAGTATTCTCTTCTATTATTTTTGGAACACATATTTATACTTAATATAATATTTGAGATATAGCACATATTGAGATTTTAGATCTTGATTTTCATTAAACAATTTTATTAAAATATGATTTACAGGCTGGGAGCGGTGGCTCATGCCTGTAATCCAAGCACTTTGGGAGGACGAGGCAGGTGGAGCACCTGAGGTTAGGAGTTGGATACTAGCCTGGCCAAAATGGCAAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCACTGTGGCAAACACTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCCGGAGGCAGAGGTTGTAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAATTTACGCACCACAATATCCACAATCGTAAATGTACAATTCAATTATTTTTAGTAAGTGTTTGTTTAAACTTGTGCAAACATCACCACAATCCAGTTTGGGACAAGTTCCCTCCTCCAAGTGTAACCTCCTGCCCATTGCAACCACACTCAGCCCTAGATAACCACTGATGTGCTTTTAGTGTCTACAAATTTGCCTTTTTTGGACATTTTAGATAAATGTAGCTTTTGTGTCTGGCTTCATTTGCTTAGCTTATGTTTTTGAGAATCATCCATGTTGTAGCGTGGATCGGTAGTTTATTTTATTTTATTTTATTTTATTTATTTATTTTTTATTTTTTGAGACAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTAGTAAGATGAGGACTCGCCTTGCAGCCTCTACCTCCTGGGCTCGAGTGATCCTCCCACCTCAGCCTCCCAAGCAGTTGCAATTACAGGCATGCCACCAGGCCTGGCTAATTTTTAAATTTTTTGTAGGGATGGGTTCCCTCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGCGATCCTCCCTCCTTGACCTCTCAAAGTGTTGGGATTACAGACATGAGTCACAGTGCTTGTCCTCATTTTTATTGCAGAATAGTATTCCACTGTTTGGATATGACACATTTTGCTTACCCATTCACCTGTTTTTGGTTATTATGAATACTGTTGCTATGAACATTCATGTACATGTGTTTGTATGGACACATATTTTCATTTCTATTGGGTAAAATTCTAGGGGTTGAATTGCTGGGTTCTATAGTAAATTTGTTTAACTTTTTAAGAAATTGCCAGACTGTTTTCCAAAGTGGCTACCCCCATTTTACATTCCCACCAGCAATGTACGAAGGCTCAAGTTTCTCTATATCCTTGTCAACACTTGTTTTTTTCTATTTTTTGATAATGGCCATTCCAGCATGTGTAGTGGTTCTCAGTGGGGTTTGAATTTGCATTTCTTTAAAGAGTAAGAATATGAAGCATCTTTGTATGTGCTCATTAACCATTCAGATGTCTTGTGAAATGTCTGTTCAAATCTTTTATCCATATAAAAATTGAATTGTTTTCTTATTATTGAATTATAATTCTTTATTCTGGATGCAATTCTTATATGAGAACTGATTTGCAATTATTTTTTTCCCAGTTTGTGACTTGTTTTTTCATTTTCTTAGCACTATCTTTTGAAGTGCAGAAGTTTTTAATTTCAATGAAGCACAATTATTTTTTTCTGTGATGGATCATGCATTTGGTGTTATATCAGAAATTTTTGCCCAACCCAGGGTCACTGTAATTTTTTCTTATGTTTTATTGTAGACATTTTATAGAGTTAGATTTTATAGTAAGATGTATAAGTGATTTTGAATTATTTTTTACATATGGTATGTTTTTGGGTCTCTGTTCATTTTTTTTTTGCATATGGCTATACAATTATCCCAGCACCATTTGTTGAAACGCCTTGGTACCTTTGTCAAAACTCAGTTGGGGGGCTGGGCGTGGTGGCTCATGCCCGTAATCCCAGCGCTTTGGAAGGCCGAGGTGGGCAGATCGCTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCTGTCTCTACTAAAAATATAAAAATTAGCCAGGTGTGGTGGCACGTGCCTGTAGTCTCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGCAGAGGTTGCAGTGAGCCAAGATGGCCCCATTGCACTCCAGCCTGGCCATTGCAGCATGTATCCATCTCAAAAAAAAAAAAAAAAAATCAGCTGGGCATTAATGTAAAGGCTTATTTCTAGCTTCTCTTGATCTATGTTCCTAGCCTTATGCCAGTACCATCCTCTGTTGTTTCTGTGAATTTATCATCATTGTGAAATGGGGTAGTACAAATCTTACAACTTTTTTCTAACCTTTCAAAATTGTTCTGCTGTTTTAGGTCCTTTACATTAAGAAAATATACAGGATCAGCCTGTCAATTTCTACAATATAACCTGCTATAGTTTTGATAGGGATTTCATTGAATTTACTTATTTTATTGGAACATTTTCTCATGTTTTTATAATTCTGATACTTTTAACTGGGACAGTTTTGGGACATTTATGGTGGGAAGAAGGGAGTTGGGATAAACTTTTAATTTCCCTTTTCATCTCAGCTTTCACTCAATATTTGCTCTATGATACCTATGCAGAGAAGATGGGTCTTTGCAATTGAGAAACTTGTGGCTATAAATTTCTTAGCTGTTAAAATTGTACTGAGTTCTCCCTAGGAGATCCACAGGGTAACCCAGACAAGAACGAGAGGCCAAGGAAATCCTGGAGGGTGGCGATTATGCTGATGGGCAGTTCATACCAGGAGTGACGACTCCTTATGCCAACAGCAGTGCAGGTTGGCAGGATGACCCTCAGCATGACATGGACACACGCTGCATTACTCGGTGGGCTGGGCAGGCAGCAGTTGCCGTCAAGAAGGCATCTGCCAGATGTGGGGAGGAAGAGCGTTCCAGCCATGACCTGACAAGAAGAAACGTGGGAGGCCACGCACAGCCAAGTGCCCACGGGGTGCTGCACACGGAGCCCAGGAATCGACTCTGGCTTCTTCCGGATCACATGGTTCACGGTGGGGTTTACAGCCCTCATTTCTGATGTTATAAGGTTAGAGGCAGTGACCTTGGGAGAGTTTACACTCAATTTAATTTTTATTGTTTCATGAAATGGAAACTGTTTTCTGTCAGTCAATAAAGCAGCGGGCCTTCTGCTGTATAATGGATGTGGATAAGCGATTGCTGTTTGTTATCACCGTTTAACTGCAGAGAAGTCTTATTAGTGGTGATTTTGGAACTCCAGGACTTTTACCAGCCTCAGGGTTAATTCTTTATCCATGTCAGCATCAATGTTGTTACATATAACAGGTTATGGCCACTTCAAAAGGAAGGGAAAGTTCAAAGTCTCTAAAGTTTAAAATGCACTAAAAAGCAAGTATGCTGAGAGAACTAGAGATCTGAACTAGGGGTCTGAGCCATCAGGAGTTTCAGTGAAAACATGTCTGAACAATCAGCTGAGCAATCAGATGTTCCAGGAAATAATGGCAACCCTAACCTATCAGGTGAAAGAAACATCATCTTAGAACTCAGCTGCATCACAACAGAGAAGCACAATGCTTATGGCAATAATCACTAGTAGTTTAGAGATGGAAAAATGATCGAACGTATTCCTTGCATGTTATGAAAAAAAATCCTAAATATTCCCAATTCCCATTTACCCGTTCAAATTGAGCAGAAGTCCTGTTGAAGTTTATATGAAAGAACGGGATATAAAAGAAATTGTAGCTTGGTTTTCGAAGGCCATAGACACTTCCTCACTCTACTAGTGTAGTATAATAGGAAAGTGGTTTTGCATTCTTGGTCAAAGGCCAACTAAATGCAGAGACGTTGGCCTCAGAAGGGATGAGGATGAGGTCAAAGGTTTTTGAATAGAGGAAGCAGAAAATGCACAAAATTGCTTCCTCAAAGGTGACATGTAGCTTTGAAAAAATACTTTGGGTAAAGAAGTCTGGTGTGGCCCAGTGTGGTGGCTCATACCTATAATCCCAGCACTTTGGGATGCTGAGGTGGGAGGATTGCTTGAGGACAGGAGTTTGAGACCAGCCTGAGTAACACAGAAATACCCCATCTCTACAACAACAACAACAGCAACAAAATTAGCTGGGCGTGGTGGTGCACATCTGTAGTCCCAGCTACTCAAGAGGCTGAGGTGGGAGTGTTGCTTGAACTCAGGAGTTGGAGGCTACAGTGAGCTATGGTCGCATTACTGCACTCCTGCTTGTGTGACAGTGTAAGACCCAGTCTCAACAATAACAAAAGAAGTCCGTGTGTGTGTGTGTGTATGTGTGTCTACAGTGTGTGTGTGTGGTGTGTGTGTGTATGTGGTGTGTGTGTGTATGTGTGGTGTGTATGTGTGTATGTGTGGTGTGTATGTGTGTGTGGTGTGTGTGTGTATGTGTGGTGTGTGTATGGTGTATGTGTATGTGTGGTGTGTGTGTGTATGTGTGTATGTGTGGTGTGTGTATGTGTGGTGTGTGTGTGTATGTGTGTATGTGTGGTGTGTATGTATGTGTGTATGTGTGGTGTGTGTATGTGTGTATGTGTGGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGTGTATGTGGTGTGTGTGTGGTGTGTGGCTGTGTGTGTGTACGTGGGGTGTATGTGTGGTGTGTGTATGTGTGTATGTGTGGTGTGTGTATGTGGTGTGTGTGTGGTGTGTGTATGTGTGGTGTGTG 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=6123;SUPPORT=6;COVERAGE=6,2,2,2,2;STRAND=+-;AF=1;STDEV_LEN=261.134;STDEV_POS=50.229;SUPPORT_LONG=3;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=478.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:4,2:6:3,1,1,1:6 +chr18 70465190 Sniffles2.INS.151S11 T TATTCTGCCGTGGTGATCAGTGTTGGAGCTCAGGAAGCTGAAGTTGTACGCAGCCTGTCCGTGCAGAGCTGAGGCTGTGACGAGAGAAGCCAGCAGCGAACGGGACCGCAGGGCCATCGGAGCAGCAGGGCGGGGGTCGGGGGAGCCCTGCCGCGCCCGGCGTTTGCAGAATCAGCTTCTGATTGGCCTCGCAGGGCAGAGCGCACACTCTGCACTGTTCGGCCTCCCTAGAGGCCATGGGGAAAGCACTAGTTTTAGGATTGGGGAAGGAAGGCACCAGGCGCTGCGGGAGGGCGAGAGGGAGGTGGAGGCTGCCGGAGTAATGAGCGGCGAGAGCTCGTGAAGCGGGGGTGCAGGGCGAGTGCAGCGGGGGTGCAGCGCGGGTGCAGGGCGGGTGCAGCGCGGGTGCAGGGCTGATGCTGGGTGGGTGCAGGGCGGGTGCAGCGGGGGTGCAGCGCGGGTGCAGGGCTGATGCAGGGTGGGTGCAGTGCGGGTGCAGGGCGGGTGCAGCGCGGGTGCAGAGCCGGTGCAACGCGGGTGCAGGGGTGATGCAGGGTGGGTGCAGTGCGGGTGCAGGGCAGGTGCAGCGTGGGTGCAGGGCGGGTGCAGCGGGGGTGCAGCGCAGGGTGCAGGGCTGATGCAGTGTGGGTGCAGCGGCCTGGCCACCTCCCTGCTCCCAGGGCGTCAGAGGGATTGCCTGAGTCCCTCTGGCAGCAATCAGGTGTGCTCTTGTTCAACAGGGGCTGCAATCGCCCCAACCTGTCCCTCCTGCCCCCGGCTCCTCCTGGAGCCCTGACCAGGGAGATCAGCAAAGTCTCCTTTTGATTTACTGCCTCTTCCCTCCATCCTGGCATCCAGGAGGGGCGGAGTGAGCAGTGGGTGAGCTCTCAAGAGTGGGGCCTGGAGATGCAAGGCGGGCAGATGGGCCGGCGGGGGCAGATTTCACATGAATAGATTTTACTTTGCAGCGGAGTGAGTGGCACGAATGGCAAATTGATTCTTAAAATATTTTGAGGGACTGGTATTATACCAAGGTGTAGGACTGACCACAAACATCGGGTTAGTTACCAGATACTAGACATGTTTACAGGAAATTGTAACATTCCTACTTCCTGATATTACTTTTACTAGGGATGTCTTCCATAAAAAACAAACAAATAAGCATTGATTTTTCCGATTACAAAAGCAATACATGCTTATTACTGAGTATTTGAAAAACACAGATGAATATAACCAAGCAAACAAAAGTCATTCAATAGTCCATGAAAGAGAGGTAACAACTGTTAATATGTTAGAAGTATTCTCTTCTATTATTTTTGGAACACATATTTATACTTAATATAATATTTGAGATATAGCACATATTGAGATTTTAGATCTTGATTTTCATTAAACAATTTTATTAAAATATGATTTACAGGCTGGGAGCGGTGGCTCATGCCTGTAATCCAAGCACTTTGGGAGGACGAGGCAGGTGGAGCACCTGAGGTTAGGAGTTGGATACTAGCCTGGCCAAAATGGCAAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCACTGTGGCAAACACTTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCCGGAGGCAGAGGTTGTAGTGAGCTGAGATTGCACCACTGCACTCCAGCCTGGGCAACAGAGCAAGACTCTGCCTCAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATAATTTACGCACCACAATATCCACAATCGTAAATGTACAATTCAATTATTTTTAGTAAGTGTTTGTTTAAACTTGTGCAAACATCACCACAATCCAGTTTGGGACAAGTTCCCTCCTCCAAGTGTAACCTCCTGCCCATTGCAACCACACTCAGCCCTAGATAACCACTGATGTGCTTTTAGTGTCTACAAATTTGCCTTTTTTGGACATTTTAGATAAATGTAGCTTTTGTGTCTGGCTTCATTTGCTTAGCTTATGTTTTTGAGAATCATCCATGTTGTAGCGTGGATCGGTAGTTTATTTTATTTTATTTTATTTTATTTATTTATTTTTTATTTTTTGAGACAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTAGTAAGATGAGGACTCGCCTTGCAGCCTCTACCTCCTGGGCTCGAGTGATCCTCCCACCTCAGCCTCCCAAGCAGTTGCAATTACAGGCATGCCACCAGGCCTGGCTAATTTTTAAATTTTTTGTAGGGATGGGTTCCCTCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGCGATCCTCCCTCCTTGACCTCTCAAAGTGTTGGGATTACAGACATGAGTCACAGTGCTTGTCCTCATTTTTATTGCAGAATAGTATTCCACTGTTTGGATATGACACATTTTGCTTACCCATTCACCTGTTTTTGGTTATTATGAATACTGTTGCTATGAACATTCATGTACATGTGTTTGTATGGACACATATTTTCATTTCTATTGGGTAAAATTCTAGGGGTTGAATTGCTGGGTTCTATAGTAAATTTGTTTAACTTTTTAAGAAATTGCCAGACTGTTTTCCAAAGTGGCTACCCCCATTTTACATTCCCACCAGCAATGTACGAAGGCTCAAGTTTCTCTATATCCTTGTCAACACTTGTTTTTTTCTATTTTTTGATAATGGCCATTCCAGCATGTGTAGTGGTTCTCAGTGGGGTTTGAATTTGCATTTCTTTAAAGAGTAAGAATATGAAGCATCTTTGTATGTGCTCATTAACCATTCAGATGTCTTGTGAAATGTCTGTTCAAATCTTTTATCCATATAAAAATTGAATTGTTTTCTTATTATTGAATTATAATTCTTTATTCTGGATGCAATTCTTATATGAGAACTGATTTGCAATTATTTTTTTCCCAGTTTGTGACTTGTTTTTTCATTTTCTTAGCACTATCTTTTGAAGTGCAGAAGTTTTTAATTTCAATGAAGCACAATTATTTTTTTCTGTGATGGATCATGCATTTGGTGTTATATCAGAAATTTTTGCCCAACCCAGGGTCACTGTAATTTTTTCTTATGTTTTATTGTAGACATTTTATAGAGTTAGATTTTATAGTAAGATGTATAAGTGATTTTGAATTATTTTTTACATATGGTATGTTTTTGGGTCTCTGTTCATTTTTTTTTTGCATATGGCTATACAATTATCCCAGCACCATTTGTTGAAACGCCTTGGTACCTTTGTCAAAACTCAGTTGGGGGGCTGGGCGTGGTGGCTCATGCCCGTAATCCCAGCGCTTTGGAAGGCCGAGGTGGGCAGATCGCTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAATATGGTGAAACCCTGTCTCTACTAAAAATATAAAAATTAGCCAGGTGTGGTGGCACGTGCCTGTAGTCTCAGCTACTCAGAAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAGCAGAGGTTGCAGTGAGCCAAGATGGCCCCATTGCACTCCAGCCTGGCCATTGCAGCATGTATCCATCTCAAAAAAAAAAAAAAAAAATCAGCTGGGCATTAATGTAAAGGCTTATTTCTAGCTTCTCTTGATCTATGTTCCTAGCCTTATGCCAGTACCATCCTCTGTTGTTTCTGTGAATTTATCATCATTGTGAAATGGGGTAGTACAAATCTTACAACTTTTTTCTAACCTTTCAAAATTGTTCTGCTGTTTTAGGTCCTTTACATTAAGAAAATATACAGGATCAGCCTGTCAATTTCTACAATATAACCTGCTATAGTTTTGATAGGGATTTCATTGAATTTACTTATTTTATTGGAACATTTTCTCATGTTTTTATAATTCTGATACTTTTAACTGGGACAGTTTTGGGACATTTATGGTGGGAAGAAGGGAGTTGGGATAAACTTTTAATTTCCCTTTTCATCTCAGCTTTCACTCAATATTTGCTCTATGATACCTATGCAGAGAAGATGGGTCTTTGCAATTGAGAAACTTGTGGCTATAAATTTCTTAGCTGTTAAAATTGTACTGAGTTCTCCCTAGGAGATCCACAGGGTAACCCAGACAAGAACGAGAGGCCAAGGAAATCCTGGAGGGTGGCGATTATGCTGATGGGCAGTTCATACCAGGAGTGACGACTCCTTATGCCAACAGCAGTGCAGGTTGGCAGGATGACCCTCAGCATGACATGGACACACGCTGCATTACTCGGTGGGCTGGGCAGGCAGCAGTTGCCGTCAAGAAGGCATCTGCCAGATGTGGGGAGGAAGAGCGTTCCAGCCATGACCTGACAAGAAGAAACGTGGGAGGCCACGCACAGCCAAGTGCCCACGGGGTGCTGCACACGGAGCCCAGGAATCGACTCTGGCTTCTTCCGGATCACATGGTTCACGGTGGGGTTTACAGCCCTCATTTCTGATGTTATAAGGTTAGAGGCAGTGACCTTGGGAGAGTTTACACTCAATTTAATTTTTATTGTTTCATGAAATGGAAACTGTTTTCTGTCAGTCAATAAAGCAGCGGGCCTTCTGCTGTATAATGGATGTGGATAAGCGATTGCTGTTTGTTATCACCGTTTAACTGCAGAGAAGTCTTATTAGTGGTGATTTTGGAACTCCAGGACTTTTACCAGCCTCAGGGTTAATTCTTTATCCATGTCAGCATCAATGTTGTTACATATAACAGGTTATGGCCACTTCAAAAGGAAGGGAAAGTTCAAAGTCTCTAAAGTTTAAAATGCACTAAAAAGCAAGTATGCTGAGAGAACTAGAGATCTGAACTAGGGGTCTGAGCCATCAGGAGTTTCAGTGAAAACATGTCTGAACAATCAGCTGAGCAATCAGATGTTCCAGGAAATAATGGCAACCCTAACCTATCAGGTGAAAGAAACATCATCTTAGAACTCAGCTGCATCACAACAGAGAAGCACAATGCTTATGGCAATAATCACTAGTAGTTTAGAGATGGAAAAATGATCGAACGTATTCCTTGCATGTTATGAAAAAAAATCCTAAATATTCCCAATTCCCATTTACCCGTTCAAATTGAGCAGAAGTCCTGTTGAAGTTTATATGAAAGAACGGGATATAAAAGAAATTGTAGCTTGGTTTTCGAAGGCCATAGACACTTCCTCACTCTACTAGTGTAGTATAATAGGAAAGTGGTTTTGCATTCTTGGTCAAAGGCCAACTAAATGCAGAGACGTTGGCCTCAGAAGGGATGAGGATGAGGTCAAAGGTTTTTGAATAGAGGAAGCAGAAAATGCACAAAATTGCTTCCTCAAAGGTGACATGTAGCTTTGAAAAAATACTTTGGGTAAAGAAGTCTGGTGTGGCCCAGTGTGGTGGCTCATACCTATAATCCCAGCACTTTGGGATGCTGAGGTGGGAGGATTGCTTGAGGACAGGAGTTTGAGACCAGCCTGAGTAACACAGAAATACCCCATCTCTACAACAACAACAACAGCAACAAAATTAGCTGGGCGTGGTGGTGCACATCTGTAGTCCCAGCTACTCAAGAGGCTGAGGTGGGAGTGTTGCTTGAACTCAGGAGTTGGAGGCTACAGTGAGCTATGGTCGCATTACTGCACTCCTGCTTGTGTGACAGTGTAAGACCCAGTCTCAACAATAACAAAAGAAGTCCGTGTGTGTGTGTGTGTATGTGTGTCTACAGTGTGTGTGTGTGGTGTGTGTGTGTATGTGGTGTGTGTGTGTATGTGTGGTGTGTATGTGTGTATGTGTGGTGTGTATGTGTGTGTGGTGTGTGTGTGTATGTGTGGTGTGTGTATGGTGTATGTGTATGTGTGGTGTGTGTGTGTATGTGTGTATGTGTGGTGTGTGTATGTGTGGTGTGTGTGTGTATGTGTGTATGTGTGGTGTGTATGTATGTGTGTATGTGTGGTGTGTGTATGTGTGTATGTGTGGTGTGTGTGGTGTGTGTGTGTGTGGTGTGTGTGTATGTGGTGTGTGTGTGGTGTGTGGCTGTGTGTGTGTACGTGGGGTGTATGTGTGGTGTGTGTATGTGTGTATGTGTGGTGTGTGTATGTGGTGTGTGTGTGGTGTGTGTATGTGTGGTGTGTG 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=6123;SUPPORT=6;COVERAGE=6,2,2,2,2;STRAND=+-;AF=1;STDEV_LEN=261.134;STDEV_POS=50.229;SUPPORT_LONG=3;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=478.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:4,2:6:3,1,1,1:6 chr18 70539430 pbsv.DEL.1134 CTTTTTTTTTTTTTTTTTTTTTTT C 2 PASS SVTYPE=DEL;SVLEN=-23;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,1:3:1,1,0,1:4 chr18 70570336 pbsv.DEL.1135 AGAGAGGGAGAGGGAGACCGTGGGG A 2 PASS SVTYPE=DEL;SVLEN=-24;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,3:5:2,0,3,0:4 chr18 70667379 pbsv.INS.1136 C CCTCCCCTTCCCCTCCCCTCCCTT 2 PASS SVTYPE=INS;SVLEN=23;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:9,3:12:5,4,0,3:4 @@ -1490,7 +1490,7 @@ chr18 71198401 chr18-71198402-INS-79 A ATATTTATATATAATATATATTTATATATTTTATATATATT chr18 71212589 pbsv.INS.1142 G GGGCGGGGCGGGGCGGGGGGCGGCGGCGGGGGGC 2 PASS SVTYPE=INS;SVLEN=33;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,4,1:4 chr18 71257713 pbsv.DEL.1143 ATATATATATATATATATATATATATC A 2 PASS SVTYPE=DEL;SVLEN=-26;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,3:4:0,1,3,0:4 chr18 71411168 chr18-71411169-DEL-657 CCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGATGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAACAGCATGATTTATAATCCTTTGGGTATATACCCGGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCACCACACTGACTTCCACAATGGTTGAACTGGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCTCCAGCATCTGTTGTTTCCTGACGTTTTAATGATTGCCATTCTAACTGGTGTGAGATGGTATCTCATTGTGGTTTTGATTTGCATTTCTCTGATGGCCAGTGATGGTGAGCATTTTTTCATGTGTTTTTCGGCTGCATAAATGTCTTCTTTTGAGAAGTTTCTGTTCATATCCTTCGCCCATTTTTTGATGGGGTTGTTTGTTTTTTTCTTGTAAATTTGTTTGAGTTCATTGTAGATTTTGTATATTAGCCCTTTGTCAGATGAGTAGGTTGCGAAAATGTTCTCCCATTCTGTAGGTTGCCTGTTCACT C 4 . ID=chr18-71411169-DEL-657;SVTYPE=DEL;SVLEN=-657;TIG_REGION=h1tg003094l:53825-53825,h2tg005716l:72625-72625;QUERY_STRAND=+,-;HOM_REF=0,1;HOM_TIG=0,0;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=481.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,6:6:.:6:16:0,0,2,4:7 -chr18 71415025 chr18-71415026-INS-58 T TATATATATCAAATATATATATATATCATATATATATATATCATATATATATCAATATA 4 . ID=chr18-71415026-INS-58;SVTYPE=INS;SVLEN=58;TIG_REGION=h1tg003094l:57017-57074;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=482.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,3:6:3:3:21:1,2,1,2:7 +chr18 71415025 chr18-71415026-INS-58 T TATATATATCAAATATATATATATATCATATATATATATATCATATATATATCAATATA 4 . ID=chr18-71415026-INS-58;SVTYPE=INS;SVLEN=58;TIG_REGION=h1tg003094l:57017-57074;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=482.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:3,3:6:3:3:21:1,2,1,2:7 chr18 71476490 Sniffles2.INS.154S11 G GAGAGAAGGAAGAACAGTGTGGTGTGGTGGCACACCTGAGAGCCACACTGGGAAG 3 PASS PRECISE;SVTYPE=INS;SVLEN=55;SUPPORT=3;COVERAGE=10,10,10,11,10;STRAND=+-;AF=0.3;STDEV_LEN=0.577;STDEV_POS=0.577;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=483.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:8,3:11:3,5,1,2:6 chr18 71541498 chr18-71541499-DEL-69 GTTGGCAATTGCTAATGCAGCAGGCATGCAGAAGTATAAACTTGCTGTGATAGGCAAAAGCTTATGTCCT G 4 . ID=chr18-71541499-DEL-69;SVTYPE=DEL;SVLEN=-69;TIG_REGION=h1tg022531l:55616-55616;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 chr18 71568538 pbsv.INS.1148 A AATAATATATATGTTATAACATGTATAATAATATATATGTTATAACATGTATAATATATATGTTATAACATGC 2 PASS SVTYPE=INS;SVLEN=72;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,3:8:3,2,1,2:4 @@ -1509,7 +1509,7 @@ chr18 72275107 chr18-72275108-INS-249 T TAAAATATTTTCTAGCTAAAACGGTGAAACCCCGTCTCTA chr18 72354487 pbsv.DEL.1159 TCTCTCTCTTTCTCTCTCTCTTTCTTTC T 2 PASS SVTYPE=DEL;SVLEN=-27;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,2:3:1,0,1,1:4 chr18 72434602 pbsv.INS.DUP.1160 T TATATATATATATATATA 0 PASS SVTYPE=INS;SVLEN=17;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,2,5:4 chr18 72455958 pbsv.INS.1161 A AATGTGTGTGTGCATTTGTGTATGCACACACACACGC 2 PASS SVTYPE=INS;SVLEN=36;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,2:3:1,0,2,0:4 -chr18 72656081 chr18-72656082-DEL-73;pbsv.DEL.1162 CCCTAGGGCTTCAGCATCCTCTGTTTCTCTGAATGAACCCTAGGGCTTCAGCATCCTCTGTTTCTCTGAATGAA C 4 PASS ID=chr18-72656082-DEL-73;SVTYPE=DEL;SVLEN=-73;TIG_REGION=h1tg010118l:104016-104016;QUERY_STRAND=+;HOM_REF=0,111;HOM_TIG=0,111;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=490.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:9:25:7 +chr18 72656081 chr18-72656082-DEL-73;pbsv.DEL.1162 CCCTAGGGCTTCAGCATCCTCTGTTTCTCTGAATGAACCCTAGGGCTTCAGCATCCTCTGTTTCTCTGAATGAA C 4 PASS ID=chr18-72656082-DEL-73;SVTYPE=DEL;SVLEN=-73;TIG_REGION=h1tg010118l:104016-104016;QUERY_STRAND=+;HOM_REF=0,111;HOM_TIG=0,111;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=490.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:9:25:7 chr18 72675591 pbsv.INS.1163 T TCAGGGCCTTCTATCAAGCCAGGAGACGCTGACCACATTCCTCGCT 2 PASS SVTYPE=INS;SVLEN=45;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,3,7:4 chr18 72692161 pbsv.DEL.1164 TTGGGAGGGGTGCGCGCTGGGAGGGGTGCGCGC T 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,4,3:4 chr18 72700548 pbsv.INS.1165 A ATACACACACATATACACATATATATACACACATATACACACACATATATATACACACATATATAAACACACATATATACACACACATATATACACACATATCTACACATATACACACATATACACACACACATATACACATATATACACATATA 2 PASS SVTYPE=INS;SVLEN=154;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,4:6:0,2,2,2:4 @@ -1537,7 +1537,7 @@ chr18 73481299 pbsv.DEL.1181 TATATATGTATATATACGTATATATATAC T 2 PASS SVTYPE=DEL;S chr18 73516948 pbsv.INS.1182 A ATATATATATATATATATATATATATATATATA 2 PASS SVTYPE=INS;SVLEN=32;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 chr18 73557833 pbsv.INS.1183 T TTCTATCTATCTATCTATCTATCTATCTA 2 PASS SVTYPE=INS;SVLEN=28;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 chr18 73588219 pbsv.DEL.1184 TATATATATATGATTATATATATAATAGG T 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,1,3:4 -chr18 73606161 chr18-73606162-DEL-321;pbsv.DEL.1185 ATGACACATTATAATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC A 4 PASS ID=chr18-73606162-DEL-321;SVTYPE=DEL;SVLEN=-321;TIG_REGION=h1tg023237l:26569-26569;QUERY_STRAND=-;HOM_REF=0,18;HOM_TIG=0,18;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=496.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:2:14:7 +chr18 73606161 chr18-73606162-DEL-321;pbsv.DEL.1185 ATGACACATTATAATCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCTACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGC A 4 PASS ID=chr18-73606162-DEL-321;SVTYPE=DEL;SVLEN=-321;TIG_REGION=h1tg023237l:26569-26569;QUERY_STRAND=-;HOM_REF=0,18;HOM_TIG=0,18;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=496.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:2:14:7 chr18 73670141 pbsv.INS.1186 C CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=31;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 chr18 73753849 pbsv.DEL.1187 TATATATATATATATATATAT T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,6,5:4 chr18 73776972 chr18-73776973-DEL-335;pbsv.DEL.1188 TAGAAATTGATCCAACACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGCTCGCACCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA T 4 PASS ID=chr18-73776973-DEL-335;SVTYPE=DEL;SVLEN=-335;TIG_REGION=h2tg006873l:85507-85507;QUERY_STRAND=+;HOM_REF=0,17;HOM_TIG=0,17;SVANN=ALU;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=497.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:4:28:7 @@ -1545,12 +1545,12 @@ chr18 73789618 pbsv.DEL.1189 ATATATATATATATATATATATATATATATATATATATATG A 2 PASS chr18 73897466 pbsv.INS.1190 T TAAAAAAAAAAAAAAAAAAAAAAAAA 2 PASS SVTYPE=INS;SVLEN=25;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 chr18 73912644 pbsv.INS.1191 A ATATATATATATATATATATATATATATGTG 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,2,5:4 chr18 74118417 pbsv.INS.1192 T TATATATATATGTGTATATACACATATATATATATATGTGTATATACAC 2 PASS SVTYPE=INS;SVLEN=48;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,4:6:2,0,2,2:4 -chr18 74140472 chr18-74140473-INS-55;pbsv.INS.1193 G GAAGGAAGGAAGAAAGGCAGGGAGAAGGGAGGAAGAGGCAGTGAAACCTTGATGGT 4 PASS ID=chr18-74140473-INS-55;SVTYPE=INS;SVLEN=55;TIG_REGION=h1tg013896l:46131-46185;QUERY_STRAND=-;HOM_REF=0,36;HOM_TIG=0,36;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=498.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:3:16:7 +chr18 74140472 chr18-74140473-INS-55;pbsv.INS.1193 G GAAGGAAGGAAGAAAGGCAGGGAGAAGGGAGGAAGAGGCAGTGAAACCTTGATGGT 4 PASS ID=chr18-74140473-INS-55;SVTYPE=INS;SVLEN=55;TIG_REGION=h1tg013896l:46131-46185;QUERY_STRAND=-;HOM_REF=0,36;HOM_TIG=0,36;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=498.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:5:3:16:7 chr18 74174872 pbsv.INS.DUP.1194 A ACACACACACACACACACACA 0 PASS SVTYPE=INS;SVLEN=20;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:1,2,2,1:4 chr18 74195809 pbsv.DEL.1195 TCTCTCTCTCTGTATATATAT T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,2,3:4 -chr18 74198889 chr18-74198890-INS-165 T TAGGATGGACCTGAGGTCTGGATGAGAGAGCTGGGGGTGGGGATAGGATGGACCTGAGGTCCGGGTGAAGGAGCTGGAGGTGGGGACAGGATGGACCTGAGGTCCGGGTGAGGGAGCTGGAGGTGGGATAGGATGCACCTGAGGTCCGGGTGCTGGAGGTGGGGAC 4 . ID=chr18-74198890-INS-165;SVTYPE=INS;SVLEN=165;TIG_REGION=h1tg010593l:60607-60771;QUERY_STRAND=-;HOM_REF=0,17;HOM_TIG=0,20;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=499.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,3:7:4:3:18:3,1,2,1:7 -chr18 74204743 Sniffles2.INS.161S11 G GAGGGTGGGAGAAGGAGGGGAATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGACTGAGTGAGGGTGGGAGAAGGACGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGGAGGAGGGGGATGGGGCGAGGGTGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGAATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGATCGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGCGGGGGATGGGCGAGGGTGGGAGAAGGAGGGAGATGAGTGAGGGTGGGCGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGCGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGTGGGATGGGCGGGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGCGGGGGATGGGCGAGGGTGGGAGAAGCAGTGGGATGGGCGGGGGGTGGGAGAAGGAGGGGGCTGGGCGAGGGTGGGAGAGGAGGGGGATGGGCGAGGGTGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGATGGGTGAGGGTGGAGAGGAGGGGGATGGGCGGGGGTGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGACGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGACTGGCTTAGGGTGGGAGGAGGAGGGGGATGGGTGAGGGTGGGAGACGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGCGAGGGTGGGAGAAGGGGGGGATGGGCGAGGGTGGGAGAAGGGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTTCGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGCGGGGGATGGGTGCGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGATCGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGC 3 PASS PRECISE;SVTYPE=INS;SVLEN=2747;SUPPORT=3;COVERAGE=5,4,4,4,5;STRAND=+;AF=1;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=500.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:4,1:5:2,2,1,0:6 -chr18 74204765 chr18-74204766-INS-1697 T TGGGTGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGTGGGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGGGGGTGGGAGAAGAAGGGGGATGGGCGGGGGGAGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGTGAGGGTAGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGACGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGTGAGGGTGGGAGAAGAAGGGGGATGGGTGAGTGTGGGAGAAGGAGGGGGATGGGTGAGGGAGGGAGAAGAAGGGGGGAGCTGTGGTGGGCAGGTGGGGAGTGCGTCGCGTGAGGAGCGAGGTGCGAATGCACTGTGGGGCGAGAAGGGGGATGGGTGAGTGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGAAGGGGGATGGGCTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGTGAGGGTAGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGTATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATG 4 . ID=chr18-74204766-INS-1697;SVTYPE=INS;SVLEN=1697;TIG_REGION=h1tg010593l:53050-54746;QUERY_STRAND=-;HOM_REF=0,29;HOM_TIG=0,29;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=500.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,3:5:1:3:1:1,1,2,1:7 +chr18 74198889 chr18-74198890-INS-165 T TAGGATGGACCTGAGGTCTGGATGAGAGAGCTGGGGGTGGGGATAGGATGGACCTGAGGTCCGGGTGAAGGAGCTGGAGGTGGGGACAGGATGGACCTGAGGTCCGGGTGAGGGAGCTGGAGGTGGGATAGGATGCACCTGAGGTCCGGGTGCTGGAGGTGGGGAC 4 . ID=chr18-74198890-INS-165;SVTYPE=INS;SVLEN=165;TIG_REGION=h1tg010593l:60607-60771;QUERY_STRAND=-;HOM_REF=0,17;HOM_TIG=0,20;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=499.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,3:7:4:3:18:3,1,2,1:7 +chr18 74204743 Sniffles2.INS.161S11 G GAGGGTGGGAGAAGGAGGGGAATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGACTGAGTGAGGGTGGGAGAAGGACGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGGAGGAGGGGGATGGGGCGAGGGTGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGAATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGATCGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGCGGGGGATGGGCGAGGGTGGGAGAAGGAGGGAGATGAGTGAGGGTGGGCGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGCGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGTGGGATGGGCGGGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGCGGGGGATGGGCGAGGGTGGGAGAAGCAGTGGGATGGGCGGGGGGTGGGAGAAGGAGGGGGCTGGGCGAGGGTGGGAGAGGAGGGGGATGGGCGAGGGTGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGATGGGTGAGGGTGGAGAGGAGGGGGATGGGCGGGGGTGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGACGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGACTGGCTTAGGGTGGGAGGAGGAGGGGGATGGGTGAGGGTGGGAGACGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGCGAGGGTGGGAGAAGGGGGGGATGGGCGAGGGTGGGAGAAGGGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTTCGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGCGGGGGATGGGTGCGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGTGAGGGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGATCGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGC 3 PASS PRECISE;SVTYPE=INS;SVLEN=2747;SUPPORT=3;COVERAGE=5,4,4,4,5;STRAND=+;AF=1;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=2;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=500.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:4,1:5:2,2,1,0:6 +chr18 74204765 chr18-74204766-INS-1697 T TGGGTGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGGAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGTGGGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGGGGGTGGGAGAAGAAGGGGGATGGGCGGGGGGAGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGTGAGGGTAGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGACGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGTGAGGGTGGGAGAAGAAGGGGGATGGGTGAGTGTGGGAGAAGGAGGGGGATGGGTGAGGGAGGGAGAAGAAGGGGGGAGCTGTGGTGGGCAGGTGGGGAGTGCGTCGCGTGAGGAGCGAGGTGCGAATGCACTGTGGGGCGAGAAGGGGGATGGGTGAGTGTGGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGAAGGGGGATGGGCTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGTGAGGGTAGGAGAAGGAGGGGGATGAGTGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGTATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGTGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGCTTAGGGTGGGAGAAGAAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATGGGCGAGGGTGGGAGAAGGAGGGGGATG 4 . ID=chr18-74204766-INS-1697;SVTYPE=INS;SVLEN=1697;TIG_REGION=h1tg010593l:53050-54746;QUERY_STRAND=-;HOM_REF=0,29;HOM_TIG=0,29;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=500.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:2,3:5:1:3:1:1,1,2,1:7 chr18 74218513 chr18-74218514-INS-239 T TATATAGTATACATAATATATACTATATATACTATATATAGTATATATATAATATATACTATATATACTATATATAGTATATATATAATATATACTATATATACTATATATAGTATATATATATACTATATATACTATATATAGTATATATATAATATATACTATATATAGTATATATAGTATATATATATACTATATATAGTATATATAGTATATATTATATATATACTATATATATTA 4 . ID=chr18-74218514-INS-239;SVTYPE=INS;SVLEN=239;TIG_REGION=h1tg010593l:39063-39301;QUERY_STRAND=-;HOM_REF=0,10;HOM_TIG=0,10;AC=1 GT:SUPP 1/0:1 chr18 74218514 Sniffles2.INS.165S11 A ATATAGTATACATAATATATACTATATATACTATATATAGTATATATATAATATATACTATATATACTATATATAGTATATATATAATATATACTATATATACTATATATAGTATATATATATACTATATATACTATATATAGTATATATATAATATATACTATATATAGTATATATAGTATATATATATACTATATATAGTATATATAGTATATATTATATATATACTATATATATTATATATATATACTATATATATAATATATACTATATATATAATATATATAGTATATATATAATATATACTATATATAATATATATATAGTATATATATATACTATATATATTATATATATAGTATATATATACACTATATATATTATATATATAGTA 3 PASS PRECISE;SVTYPE=INS;SVLEN=394;SUPPORT=5;COVERAGE=9,8,8,8,8;STRAND=+-;AF=0.625;STDEV_LEN=1.155;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=501.3 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:4,5:9:1,3,2,3:6 chr18 74218556 Sniffles2.INS.164S11 T TATATATAATATATACTATATATACTATATATAGTATATATAATATATACTATATATACTATATATAGTATATATATACTATATATATTATATATAGTATATATTATATATATACTATATATATTAATATAGTATATATTATATATACTATATATATAATATATATACTATATATATAATATATATAGTATATATTATATTATATATAGTATATATACTATATATATATATTATATAGTATATATA 3 GT IMPRECISE;SVTYPE=INS;SVLEN=246;SUPPORT=2;COVERAGE=9,8,8,8,8;STRAND=-;AF=0.25;STDEV_LEN=2.121;STDEV_POS=29.698;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:3:6:2:2 @@ -1558,16 +1558,16 @@ chr18 74218652 pbsv.INS.1199 T TAGTATATATTATATATATACTATATATATTAATATAGTATATATTATA chr18 74218652 chr18-74218653-INS-243 T TAGTATATATTATATATATACTATATATTAATATAGTATATATATATACTATATATATAATATATTACTATATATACTATATACTATATATATAATATATATACTATATATAATTATAGTATATATATAATATATATAGATATATATAATATATACTATATATAATAATATATACTATATATATAATATATATAGATATATTATATTATATAGTATATATACTCTATATATTAATATATGTATA 4 . ID=chr18-74218653-INS-243;SVTYPE=INS;SVLEN=243;TIG_REGION=h2tg020221l:102160-102402;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 0/1:1 chr18 74218652 chr18-74218653-INS-157 T TTATATATATACTATATATATAATATATACTATATATATAATATATATAGTATATATATAATATATACTATATATAATATATATATAGTATATATATATACTATATATATTATATATATAGTATATATATATACACTATATATATTATATATATAGTA 4 . ID=chr18-74218653-INS-157;SVTYPE=INS;SVLEN=157;TIG_REGION=h1tg010593l:38767-38923;QUERY_STRAND=-;HOM_REF=0,17;HOM_TIG=0,17;AC=1 GT:SUPP 1/0:1 chr18 74250293 pbsv.DEL.1201 ACCAGGTGAGGACTGTCAGGTGAGGACCG A 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:1,2,0,3:4 -chr18 74269352 chr18-74269353-INS-64 A ACGTGTCTAAACACAGGAGCACCCTGGGGCTCAGTCCCTGGTCCTCACCCCTCCTCCATCTGCGT 4 . ID=chr18-74269353-INS-64;SVTYPE=INS;SVLEN=64;TIG_REGION=h2tg020221l:51458-51521;QUERY_STRAND=-;HOM_REF=0,64;HOM_TIG=0,64;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=502.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,6:7:.:6:16:1,0,3,3:7 +chr18 74269352 chr18-74269353-INS-64 A ACGTGTCTAAACACAGGAGCACCCTGGGGCTCAGTCCCTGGTCCTCACCCCTCCTCCATCTGCGT 4 . ID=chr18-74269353-INS-64;SVTYPE=INS;SVLEN=64;TIG_REGION=h2tg020221l:51458-51521;QUERY_STRAND=-;HOM_REF=0,64;HOM_TIG=0,64;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=502.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:1,6:7:.:6:16:1,0,3,3:7 chr18 74281743 pbsv.INS.1203 C CTGTGTGTGTGTGTGTGTGGTGTGTGTGTG 2 PASS SVTYPE=INS;SVLEN=29;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:2,2,1,2:4 chr18 74361917 chr18-74361918-INS-142 C CACATAATATAATTTATAATTGTATATTTACATATAATATAATTTATAATTATATATTTATACATAATATAATTAATATTATATATGCATATATTATATAATTTGTAATATATGCATATATTATTAATTTATAATATATGCAT 4 . ID=chr18-74361918-INS-142;SVTYPE=INS;SVLEN=142;TIG_REGION=h1tg001608l:215211-215352;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,1;AC=1 GT:SUPP 1/0:1 chr18 74361923 Sniffles2.INS.167S11 A TATAATTTATAATTATATATTTTATACATAATATAATTAATATTATATATGCATATATTATATAATTTGTAATATATGCATATATTATTAAATTATAATATATGCATATATT 3 PASS PRECISE;SVTYPE=INS;SVLEN=112;SUPPORT=3;COVERAGE=6,7,7,7,7;STRAND=+;AF=0.429;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:18:4:3:2 -chr18 74361934 chr18-74361935-INS-202 A AATTATATATTTACGTATAATATAATTTATAATTATATATTTACGTATAATATAATTTATAATTATATACGTATAATATAATTTATATTATATATGTATATAATATAATTTATAATTATATATTTATATATAATATAATTTATATTATATATGTATATAATATAATTTATAATTATATATTTATATATAATATAATTTATATT 4 . ID=chr18-74361935-INS-202;SVTYPE=INS;SVLEN=202;TIG_REGION=h2tg010666l:47062-47263;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=503.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,6:6:3:4:18:0,0,4,2:7 -chr18 74425098 chr18-74425099-DEL-65 TTCCCGTCAGGAAGTCAGTCAGTTTCCCGTCAGGAAGTCAGTCAGTTTCCCATCAGGAAGTCAGTC T 4 . ID=chr18-74425099-DEL-65;SVTYPE=DEL;SVLEN=-65;TIG_REGION=h2tg010301l:88883-88883;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=504.0 GT:DR:DV:GQ:SUPP 1/1:1:10:17:3 -chr18 74425132 chr18-74425133-DEL-88;pbsv.DEL.1205 AAGTCAGTCAGTTTCCCATCAGGAAGTCAGTCTCCCATCAGGAAGTCAGTCAGTTTCCCATCAGGAAGTCAGTTTCCCATCAGGAAGTC A 4 PASS ID=chr18-74425133-DEL-88;SVTYPE=DEL;SVLEN=-88;TIG_REGION=h1tg001608l:151999-151999;QUERY_STRAND=-;HOM_REF=0,7;HOM_TIG=0,7;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,4,7:5 +chr18 74361934 chr18-74361935-INS-202 A AATTATATATTTACGTATAATATAATTTATAATTATATATTTACGTATAATATAATTTATAATTATATACGTATAATATAATTTATATTATATATGTATATAATATAATTTATAATTATATATTTATATATAATATAATTTATATTATATATGTATATAATATAATTTATAATTATATATTTATATATAATATAATTTATATT 4 . ID=chr18-74361935-INS-202;SVTYPE=INS;SVLEN=202;TIG_REGION=h2tg010666l:47062-47263;QUERY_STRAND=-;HOM_REF=0,2;HOM_TIG=0,2;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=503.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,6:6:3:4:18:0,0,4,2:7 +chr18 74425098 chr18-74425099-DEL-65 TTCCCGTCAGGAAGTCAGTCAGTTTCCCGTCAGGAAGTCAGTCAGTTTCCCATCAGGAAGTCAGTC T 4 . ID=chr18-74425099-DEL-65;SVTYPE=DEL;SVLEN=-65;TIG_REGION=h2tg010301l:88883-88883;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=504.0 GT:DR:DV:GQ:SUPP 0/1:1:10:17:3 +chr18 74425132 chr18-74425133-DEL-88;pbsv.DEL.1205 AAGTCAGTCAGTTTCCCATCAGGAAGTCAGTCTCCCATCAGGAAGTCAGTCAGTTTCCCATCAGGAAGTCAGTTTCCCATCAGGAAGTC A 4 PASS ID=chr18-74425133-DEL-88;SVTYPE=DEL;SVLEN=-88;TIG_REGION=h1tg001608l:151999-151999;QUERY_STRAND=-;HOM_REF=0,7;HOM_TIG=0,7;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/0:0,11:11:0,0,4,7:5 chr18 74458604 pbsv.INS.DUP.1206 G GGGTTTGGGTGTCACTCAATCAACAGC 0 PASS SVTYPE=INS;SVLEN=26;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,3,2:4 chr18 74485193 chr18-74485194-DEL-340;pbsv.DEL.1207 TTCCATGATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCCAGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCGCGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCC T 4 PASS ID=chr18-74485194-DEL-340;SVTYPE=DEL;SVLEN=-340;TIG_REGION=h1tg001608l:91978-91978,h2tg010301l:28754-28754;QUERY_STRAND=-,-;HOM_REF=0,14;HOM_TIG=0,14;SVANN=ALU;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=505.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:10:27:7 -chr18 74503904 chr18-74503905-INS-54;pbsv.INS.1208 A ACACACGCAGCCACACTGCCGCTGGGACAAATGAGGGGCGTCAGGCCATACACTG 4 PASS ID=chr18-74503905-INS-54;SVTYPE=INS;SVLEN=54;TIG_REGION=h1tg001608l:73543-73596;QUERY_STRAND=-;HOM_REF=0,126;HOM_TIG=0,126;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=506.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 +chr18 74503904 chr18-74503905-INS-54;pbsv.INS.1208 A ACACACGCAGCCACACTGCCGCTGGGACAAATGAGGGGCGTCAGGCCATACACTG 4 PASS ID=chr18-74503905-INS-54;SVTYPE=INS;SVLEN=54;TIG_REGION=h1tg001608l:73543-73596;QUERY_STRAND=-;HOM_REF=0,126;HOM_TIG=0,126;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=506.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:6:16:7 chr18 74503904 chr18-74503905-INS-54.1 A ACACACGCAGCCACACTGCCGCTGGGACAAATGATGGGCGTCAGGCCATACACTG 4 . ID=chr18-74503905-INS-54.1;SVTYPE=INS;SVLEN=54;TIG_REGION=h2tg010301l:10313-10366;QUERY_STRAND=-;HOM_REF=0,33;HOM_TIG=0,33;AC=1 GT:SUPP 0/1:1 chr18 74514629 pbsv.INS.1209 G GGATGTAAGTTCCGCAGGCTGTGGGTTTATGCGGTACA 2 PASS SVTYPE=INS;SVLEN=37;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,5:6:1,0,3,2:4 chr18 74573430 pbsv.INS.1210 A ATCCATTCATCCATCCATCCATCTATCTATGTA 2 PASS SVTYPE=INS;SVLEN=32;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,3:10:3,4,1,2:4 @@ -1575,7 +1575,7 @@ chr18 74617096 chr18-74617097-INS-1997 A ACACACATCCATATCCGTACACCACACACATCCATATCC chr18 74710966 pbsv.DEL.1212 AATCAATTCACTCTGTCCATTCTCCATGGATGCTATT A 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,5:6:0,1,4,1:4 chr18 74756025 pbsv.INS.1213 C CCTCCCTCCCTTTCTTTCTTTTT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,2,4:4 chr18 74766009 pbsv.DEL.1214 CTGTGTGTGTGTGTGTGTGTG C 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,3,8:4 -chr18 75067409 chr18-75067410-DEL-86;pbsv.DEL.1215 CGCTGGAAGCTCCACTGCCCTTTACAAGGTTCTATGAGCGCGGGGCTGGAAGCTCCACTGCCCTTTACAAGGTTCTATGAGCGCGGG C 4 PASS ID=chr18-75067410-DEL-86;SVTYPE=DEL;SVLEN=-86;TIG_REGION=h1tg006280l:236990-236990,h2tg003451l:128712-128712;QUERY_STRAND=+,-;HOM_REF=0,123;HOM_TIG=0,123;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=508.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:8:22:7 +chr18 75067409 chr18-75067410-DEL-86;pbsv.DEL.1215 CGCTGGAAGCTCCACTGCCCTTTACAAGGTTCTATGAGCGCGGGGCTGGAAGCTCCACTGCCCTTTACAAGGTTCTATGAGCGCGGG C 4 PASS ID=chr18-75067410-DEL-86;SVTYPE=DEL;SVLEN=-86;TIG_REGION=h1tg006280l:236990-236990,h2tg003451l:128712-128712;QUERY_STRAND=+,-;HOM_REF=0,123;HOM_TIG=0,123;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=508.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 chr18 75068024 chr18-75068025-DEL-50 AGAAGATGGCTAAAAGTACGCACAGGGAAGGGGAGCAGGCACTGGTGGATG A 4 . ID=chr18-75068025-DEL-50;SVTYPE=DEL;SVLEN=-50;TIG_REGION=h1tg006280l:237519-237519,h2tg003451l:128183-128183;QUERY_STRAND=+,-;HOM_REF=0,15;HOM_TIG=0,15;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=509.0 GT:DR:DV:GQ:SUPP 1/1:.:7:19:3 chr18 75105022 chr18-75105023-DEL-78;pbsv.DEL.1216 CGTGGAAGCTTTGCTGAAATGTCCTGCTTGTGTTTTACTCCGTGGCGAGCACAGCGTGCAGGTGCTCCGTGGAAGCTCA C 4 PASS ID=chr18-75105023-DEL-78;SVTYPE=DEL;SVLEN=-78;TIG_REGION=h2tg003451l:91227-91227;QUERY_STRAND=-;HOM_REF=0,10;HOM_TIG=0,10;SVANN=TANDEM;AC=2;NumCollapsed=2;NumConsolidated=1;CollapseId=510.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:9:2:5:5 chr18 75108304 pbsv.DEL.1217 GCCTCACTCCCGCCAGCCCAGCAC G 2 PASS SVTYPE=DEL;SVLEN=-23;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,4:9:1,4,2,2:4 @@ -1589,7 +1589,7 @@ chr18 75526339 pbsv.INS.1224 T TCACTGCCGTAACAAATGGGG 2 PASS SVTYPE=INS;SVLEN=20; chr18 75526685 chr18-75526686-INS-110 G GGGGAGGTTGGCTGGACGGGGCTGGGAAATGATAGAATTAGCAGAAACACGATGGAATGGAAGTACATGGCAAGCTCACGGACCATGGGGGGACACAACCAAGTAGAGTCT 4 . ID=chr18-75526686-INS-110;SVTYPE=INS;SVLEN=110;TIG_REGION=h2tg004119l:7086-7195;QUERY_STRAND=+;HOM_REF=0,27;HOM_TIG=0,27;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=512.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:1,3:4:1:3:1:0,1,3,0:7 chr18 75560577 pbsv.DEL.1226 ATATATATATACACATATATATATATATA A 2 PASS SVTYPE=DEL;SVLEN=-28;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,8:11:1,2,3,5:4 chr18 75573588 pbsv.DEL.1227 CTCCACAGAGCATATAAAAGACCCTCA C 2 PASS SVTYPE=DEL;SVLEN=-26;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,4:10:2,4,1,3:4 -chr18 75712351 chr18-75712352-DEL-68 AACTCTCTCAGATCCAAAATGGCAGCTGCATGGCTGACTCTCAGATCCAAAATGGCTGCTGCATGGCCG A 4 . ID=chr18-75712352-DEL-68;SVTYPE=DEL;SVLEN=-68;TIG_REGION=h1tg000470l:180412-180412;QUERY_STRAND=+;HOM_REF=0,22;HOM_TIG=0,14;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=513.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,2:6:3:2:11:1,3,2,0:7 +chr18 75712351 chr18-75712352-DEL-68 AACTCTCTCAGATCCAAAATGGCAGCTGCATGGCTGACTCTCAGATCCAAAATGGCTGCTGCATGGCCG A 4 . ID=chr18-75712352-DEL-68;SVTYPE=DEL;SVLEN=-68;TIG_REGION=h1tg000470l:180412-180412;QUERY_STRAND=+;HOM_REF=0,22;HOM_TIG=0,14;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=513.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,2:6:3:2:11:1,3,2,0:7 chr18 75771392 pbsv.INS.1229 A ATGTGTAAAATGAAGAAATGGAAAG 2 PASS SVTYPE=INS;SVLEN=24;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 chr18 75777780 pbsv.INS.1230 T TCACCTCCTACTTCGGGGACAGTCCTGCCTGCCCACTCCAGC 2 PASS SVTYPE=INS;SVLEN=41;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 chr18 75842472 pbsv.INS.1231 G GGATCCTATTCCCATTTCCATGTTGCTTTTTCGT 2 PASS SVTYPE=INS;SVLEN=33;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:5,3,1,0:4 @@ -1598,11 +1598,11 @@ chr18 75917368 pbsv.DEL.1233 CTCTCTCTCCTCTGTCTCTCT C 2 PASS SVTYPE=DEL;SVLEN=-20 chr18 75977981 pbsv.INS.1234 C CCTTTCTTTCTTTCTTTCTTTCTTTCTTT 2 PASS SVTYPE=INS;SVLEN=28;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,4,5:4 chr18 75997752 pbsv.DEL.1235 CTGAATTTTGTAAAGTGCGTGT C 2 PASS SVTYPE=DEL;SVLEN=-21;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,4:6:2,0,3,1:4 chr18 76218128 pbsv.INS.1237 A AGAGAGAGAAAGAGAGAGAGAGAGAGG 2 PASS SVTYPE=INS;SVLEN=26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,10:11:1,0,6,4:4 -chr18 76240267 chr18-76240268-INS-346 G GTATATGTGTATATACACACATATGTATATGTGTATATACACACATATGTATATGTGTATATACACACATATGTATATGTGTATATTACACACATATGTATATGTGTATATACACACATATTGTATATGTGTATATACACACATATGTATATGTGTATATACACACATATGTTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATACATATGTGTATATACACATGTTATATGTGTATATACACATGTTATATGTGTATATACACATATGT 4 . ID=chr18-76240268-INS-346;SVTYPE=INS;SVLEN=346;TIG_REGION=h1tg009220l:53343-53688;QUERY_STRAND=+;HOM_REF=0,5;HOM_TIG=0,18;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=514.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,2,3:7 +chr18 76240267 chr18-76240268-INS-346 G GTATATGTGTATATACACACATATGTATATGTGTATATACACACATATGTATATGTGTATATACACACATATGTATATGTGTATATTACACACATATGTATATGTGTATATACACACATATTGTATATGTGTATATACACACATATGTATATGTGTATATACACACATATGTTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATACATATGTGTATATACACATGTTATATGTGTATATACACATGTTATATGTGTATATACACATATGT 4 . ID=chr18-76240268-INS-346;SVTYPE=INS;SVLEN=346;TIG_REGION=h1tg009220l:53343-53688;QUERY_STRAND=+;HOM_REF=0,5;HOM_TIG=0,18;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=514.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,5:5:.:5:13:0,0,2,3:7 chr18 76240289 chr18-76240290-INS-289 G GTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTATATGTGTATATACACATATGTTATATGTGTATATACACATATGTTATATGTGTATATACATATATGT 4 . ID=chr18-76240290-INS-289;SVTYPE=INS;SVLEN=289;TIG_REGION=h2tg013608l:50461-50749;QUERY_STRAND=+;HOM_REF=0,9;HOM_TIG=0,31;AC=1 GT:SUPP 0/1:1 chr18 76241969 chr18-76241970-INS-326;pbsv.INS.1239 T TCATAAGCTAAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTGGCCCAGGTGGGAGTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAAGCGTGAGCCACCGCGCCCGGCC 4 PASS ID=chr18-76241970-INS-326;SVTYPE=INS;SVLEN=326;TIG_REGION=h1tg009220l:55392-55717,h2tg013608l:52432-52757;QUERY_STRAND=+,+;HOM_REF=0,15;HOM_TIG=0,15;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=515.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 chr18 76392647 Sniffles2.DEL.36ES11 GGAAGGCAGGTGACCAGGTGGGGGAAAGGTGGATGGGAAGGCAGGTGACCAGGTGGGGGAAAGGTGGATGG G 0 GT PRECISE;SVTYPE=DEL;SVLEN=-70;SUPPORT=2;COVERAGE=8,8,8,8,6;STRAND=+;AF=0.25;STDEV_LEN=0.707;STDEV_POS=0.707;AC=1 GT:GQ:DR:DV:SUPP 0/1:3:6:2:2 -chr18 76393029 chr18-76393030-DEL-1609 AGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCG A 4 . ID=chr18-76393030-DEL-1609;SVTYPE=DEL;SVLEN=-1609;TIG_REGION=h1tg012113l:94691-94691,h2tg013068l:75258-75258;QUERY_STRAND=-,-;HOM_REF=0,64;HOM_TIG=0,41;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=516.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:2,6:8:3:4:18:1,1,3,3:7 +chr18 76393029 chr18-76393030-DEL-1609 AGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCG A 4 . ID=chr18-76393030-DEL-1609;SVTYPE=DEL;SVLEN=-1609;TIG_REGION=h1tg012113l:94691-94691,h2tg013068l:75258-75258;QUERY_STRAND=-,-;HOM_REF=0,64;HOM_TIG=0,41;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=516.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:2,6:8:3:4:18:1,1,3,3:7 chr18 76393049 Sniffles2.DEL.36FS11 GGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAGG G 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-69;SUPPORT=2;COVERAGE=8,6,6,6,7;STRAND=+-;AF=0.333;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:8:4:2:2 chr18 76393113 Sniffles2.DEL.372S11 GGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCG G 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-1121;SUPPORT=2;COVERAGE=8,6,7,7,7;STRAND=+;AF=0.286;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:6:5:2:2 chr18 76393591 pbsv.DEL.1241 GGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTAGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGAAGCCGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGCGGGTGGTCAGGTGGGGGGAGGGCAGGTGGTCAGGTGGGGGGAAGGCAGGTGGTCAGGTGGGGGCAGGGC G 2 PASS SVTYPE=DEL;SVLEN=-1207;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:3,3,1,0:4 @@ -1614,7 +1614,7 @@ chr18 76423584 chr18-76423585-DEL-65 ACAGGTAAAAAGGCTTCACCCCTGAAACACCCACACGCAGGTG chr18 76424241 chr18-76424242-DEL-62 CGCACGTGAAAAGGCTCCCTCCTGAAACACACATGCAGGTGAAAAGGCTCCCCCGAAACACAT C 4 . ID=chr18-76424242-DEL-62;SVTYPE=DEL;SVLEN=-62;TIG_REGION=h1tg012113l:64554-64554,h2tg013068l:45121-45121;QUERY_STRAND=-,-;HOM_REF=0,3;HOM_TIG=0,3;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=519.0 GT:DR:DV:GQ:SUPP 1/1:.:11:30:3 chr18 76449385 chr18-76449386-INS-72 T TCATGAGGCTGACCAACCCACCACCCAGGTACAGTACAGCCTTCCTGACCTCCTTCTCCCTGCCCCACCTGTC 4 . ID=chr18-76449386-INS-72;SVTYPE=INS;SVLEN=72;TIG_REGION=h1tg012113l:39394-39465;QUERY_STRAND=-;HOM_REF=0,17;HOM_TIG=0,17;AC=1 GT:SUPP 1/0:1 chr18 76467151 chr18-76467152-DEL-162;pbsv.DEL.1243 CACAGCCCTTCTGGGTTGGCAGGAAGTCCTGCGTGTCTCTCGGAACCTGCAGCTCACAGCCCCTCTGGGCTGGCAGGAAGTCCTGCGTGTCTCTCGGAACCTGCAGCTGACAGCCCCTCTGGGTTGGCAGGAAGTCCTGCGTGTCTCTCGGAACCTGCAGCTG C 4 PASS ID=chr18-76467152-DEL-162;SVTYPE=DEL;SVLEN=-162;TIG_REGION=h1tg012113l:21613-21613,h2tg013068l:2265-2265;QUERY_STRAND=-,-;HOM_REF=0,7;HOM_TIG=0,7;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=521.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:7:19:7 -chr18 76508873 chr18-76508874-DEL-132;pbsv.DEL.1244 GATATCATATATAGTATATAGTATATATGATATCATATATAGTACATATATGATATATATAGTATATGATATATATAGTATACATATCATATATAGTATATATGATATATATCATATATAGTATATATGATAT G 4 PASS ID=chr18-76508874-DEL-132;SVTYPE=DEL;SVLEN=-132;TIG_REGION=h1tg023395l:10347-10347;QUERY_STRAND=+;HOM_REF=0,12;HOM_TIG=0,12;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=522.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:2:5:7 +chr18 76508873 chr18-76508874-DEL-132;pbsv.DEL.1244 GATATCATATATAGTATATAGTATATATGATATCATATATAGTACATATATGATATATATAGTATATGATATATATAGTATACATATCATATATAGTATATATGATATATATCATATATAGTATATATGATAT G 4 PASS ID=chr18-76508874-DEL-132;SVTYPE=DEL;SVLEN=-132;TIG_REGION=h1tg023395l:10347-10347;QUERY_STRAND=+;HOM_REF=0,12;HOM_TIG=0,12;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=522.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:2:5:7 chr18 76540294 pbsv.DEL.1245 AACACACACACACACACACAC A 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,2:2:0,0,1,1:4 chr18 76556743 pbsv.INS.1246 A AAAAAAATATATATATATATATATAT 2 PASS SVTYPE=INS;SVLEN=25;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,5,1:4 chr18 76585337 pbsv.DEL.1247 CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTTTCTTTCTCTCTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTTTCTTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTTCCCTTCCTCCCTTCTTTCTCTCTCTCTTTCTTTCTTTTTCTTT C 2 PASS SVTYPE=DEL;SVLEN=-573;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:2,1,1,0:4 @@ -1635,11 +1635,11 @@ chr18 76739232 pbsv.INS.1256 C CCTCCTGTACTCCCTCCCTCC 2 PASS SVTYPE=INS;SVLEN=20; chr18 76774899 pbsv.INS.DUP.1257 G GTTCAAGCAATTCTCTGCCTCAGCCTCCCG 0 PASS SVTYPE=INS;SVLEN=29;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,1,1:4 chr18 76776670 chr18-76776671-INS-115 C CGGAAAGGCGGGGTCTCGGTGGCATCAATCAACATATGTAAGATGAACATTGGCTCGGTTTGGAAAGGCGGGGCCTCGGCATCAATCAACATGTAAGATGAACATTGGTTCGGTTT 4 . ID=chr18-76776671-INS-115;SVTYPE=INS;SVLEN=115;TIG_REGION=h1tg013817l:30402-30516,h2tg003353l:234948-235080;QUERY_STRAND=+,-;HOM_REF=0,36;HOM_TIG=0,36;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=526.0 GT:DR:DV:GQ:SUPP 1/1:.:7:19:3 chr18 76776705 pbsv.INS.1258 A ATGTAAGATGAACATTGGCTCGGTTTGGAAAGGCGGGGCCTCGGCATCAATCAACATGTAAGATGAACATTGGTTCGGTTTGGAAAGGCGGGGTCTCGGTGGCATCAATCAACATATGTAAGATGAACAGTGGT 2 PASS SVTYPE=INS;SVLEN=133;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 -chr18 76792585 chr18-76792586-INS-235 G GGGGGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGGGAGAGCTACACTCAGCATGCGTGCTGGTAGGAGGGCTGAGGTGGGAGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGGAGAGCACACTCAGTGTGCGTGCTGGTAGGAGGGCTGAGGTGGGAGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGAGAGCTACACTTAGCATGCGTGCTGGTAGGAGGGCTGAGGT 4 . ID=chr18-76792586-INS-235;SVTYPE=INS;SVLEN=235;TIG_REGION=h1tg013817l:46441-46675;QUERY_STRAND=+;HOM_REF=0,37;HOM_TIG=0,37;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=527.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,9:9:3:6:13:0,0,2,7:7 +chr18 76792585 chr18-76792586-INS-235 G GGGGGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGGGAGAGCTACACTCAGCATGCGTGCTGGTAGGAGGGCTGAGGTGGGAGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGGAGAGCACACTCAGTGTGCGTGCTGGTAGGAGGGCTGAGGTGGGAGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGAGAGCTACACTTAGCATGCGTGCTGGTAGGAGGGCTGAGGT 4 . ID=chr18-76792586-INS-235;SVTYPE=INS;SVLEN=235;TIG_REGION=h1tg013817l:46441-46675;QUERY_STRAND=+;HOM_REF=0,37;HOM_TIG=0,37;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=527.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,9:9:3:6:13:0,0,2,7:7 chr18 76792642 chr18-76792643-INS-312 G GTGCTGGTAGGAGGGCTGAGGTGGGAGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGGAGAGCACACTCAGTGTGCATGCTGGTAGGAGGGCTGAGGTGGGAGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGGAGAGCACACTCAGTGTGCGTGCTGGTAGGAGGGCTGAGGTGGGAGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGAGAGCTACACTTAGCATGCGTGCTGGTAGGAGGGCTGAGGTGGGGGGGACAGGAAGAGAAGGTTGGGATGGTGGGGGGAGAGCTACACTCAGCATGCA 4 . ID=chr18-76792643-INS-312;SVTYPE=INS;SVLEN=312;TIG_REGION=h2tg003353l:218692-219003;QUERY_STRAND=-;HOM_REF=0,64;HOM_TIG=0,64;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=527.1 GT:DR:DV:GQ:SUPP 0/1:6:3:13:3 chr18 76817619 pbsv.INS.1260 G GATATATATATATATTTTTTT 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,5:6:1,0,4,1:4 -chr18 76851082 chr18-76851083-INS-311;pbsv.INS.1261 G GAAGAGTTTGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA 4 PASS ID=chr18-76851083-INS-311;SVTYPE=INS;SVLEN=311;TIG_REGION=h2tg003353l:159937-160247;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;SVANN=ALU;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=528.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 -chr18 76858982 chr18-76858983-INS-88;pbsv.INS.1262 G GTGGAGGCGGGTGCAGGTGGAGGAGAAAGGGGGAGAGGGCTCAGGTGGAGGCAGGTGCAGGTGGAGGAGGAAGGGGGAGAGGGCTCAGC 4 PASS ID=chr18-76858983-INS-88;SVTYPE=INS;SVLEN=88;TIG_REGION=h2tg003353l:151947-152034;QUERY_STRAND=-;HOM_REF=0,112;HOM_TIG=0,112;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=529.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:7:19:7 +chr18 76851082 chr18-76851083-INS-311;pbsv.INS.1261 G GAAGAGTTTGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAA 4 PASS ID=chr18-76851083-INS-311;SVTYPE=INS;SVLEN=311;TIG_REGION=h2tg003353l:159937-160247;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;SVANN=ALU;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=528.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:8:22:7 +chr18 76858982 chr18-76858983-INS-88;pbsv.INS.1262 G GTGGAGGCGGGTGCAGGTGGAGGAGAAAGGGGGAGAGGGCTCAGGTGGAGGCAGGTGCAGGTGGAGGAGGAAGGGGGAGAGGGCTCAGC 4 PASS ID=chr18-76858983-INS-88;SVTYPE=INS;SVLEN=88;TIG_REGION=h2tg003353l:151947-152034;QUERY_STRAND=-;HOM_REF=0,112;HOM_TIG=0,112;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=529.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:7:19:7 chr18 76905542 pbsv.DEL.1263 CAAGAAAAAAAAAAAAAAAAAAAAAAA C 2 PASS SVTYPE=DEL;SVLEN=-26;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,3,1:4 chr18 76926805 chr18-76926806-INS-579;pbsv.INS.1264 A ATATAGTATAAAGGGTGATTACACAGTGTGTGTGTGTGTATGGTATAAAGGGTGATTAGACAGTGTATATGTGTGTGTGTATGGTATAAAGGGTGATTAGACTGTGTGTATGGTATAAACGGTGATTAGACTGTGTGTATGATATAAAGGGTGATTAGACAGTGTGTGTATATGGTATAAAGGGTGATTAGACAGTGTGTGTGTGTATGGTATAAAGGGTGATTAGGGCCGGGTGTGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGATCGACGGATCACGAGGTCAGGAGATCGAGATCATCCTGGCTAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAATTACCCAGGTGTGGTGGCTGGCGCCTGTAGTCCCAGCTACTCAGGAGGGTGAGGGAGGAGAATGGTGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCTGAGATGGCACCACTGCACTCTAGTCTGGGCGACTGAGCGAGAGACTGTCTCAAAAAAAAAAAAAGGGTGATTAGACAGTGTGTGTGTATGGTATAAAGGGTGATTAGACAGTATGTGTGTG 4 PASS ID=chr18-76926806-INS-579;SVTYPE=INS;SVLEN=579;TIG_REGION=h1tg003347l:52510-53088,h2tg003353l:83574-84152;QUERY_STRAND=-,-;HOM_REF=0,3;HOM_TIG=0,3;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=530.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:9:25:7 chr18 76940304 pbsv.DEL.1265 ATTTGGGAACATGGTGGGCTACCCTAGCATTGCG A 2 PASS SVTYPE=DEL;SVLEN=-33;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,4,4:4 @@ -1648,7 +1648,7 @@ chr18 76967266 pbsv.INS.1266 T TATTTGGTTGTTGGAGGTGATGTGATTCGTGAGATGTGTTATTTGGTTG chr18 76967267 Sniffles2.INS.17CS11 A ATTTGGTTTGTTGGAGGTGATGTGATTCGTGAGATGTGTTATTTGGTTGTTGGAGGTGATGTGATTCGTGAGATGTGTTATTTGGTTGTTGGAGGTGATGTGATTCGTGAGATGTGTTATTTGGTTGTTGGAGGTGGTGTGATCTGTGAC 3 PASS PRECISE;SVTYPE=INS;SVLEN=150;SUPPORT=3;COVERAGE=5,5,5,4,5;STRAND=+-;AF=0.6;STDEV_LEN=21.656;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:11:2:3:2 chr18 76967453 Sniffles2.INS.17DS11 T TCTGAGTTATGTGACTTGGTTGTTGGAAGTGGTGTGATCTGTGACATTTGTGATTTGGTTGTTGGAGGTGGTGTGATCTGTGAGATTTGTGATTTAGTTGTTGGAGGTGATGTGATCTGTGAGGTTTGTGATTTGTTGTTGGAGGTGGTGTGCTCTGAGTTATGTGATTTTGTTGTTGGAGGTGGTGTGCTCTGTGAGATTTGTGATTTGGTGTTGGAGGTGGTGGTGTGATCTGTGAGATTTGTGATTTGGTGTTGGAGGTGGGTGGTGTGATCTGTGAGATTTGTGATTTGGTGTTGGAGGTGGTGGTGTGATCTGTGAGATTTGTGATTTGGTGTTGGAGGTGGTGGTGTGATCTGTGAGATTTGTGATTTGGTGTTGGAGGTGGTGGTGTGATCTGTGAGATTTGTGATTTGGTGTTGGAGGTGGTGGGTGTTGCTCTGAGATTTGTGATTTGGTGTTGGAGGTGGTGGGTGTGA 3 PASS PRECISE;SVTYPE=INS;SVLEN=479;SUPPORT=3;COVERAGE=5,4,4,5,5;STRAND=+-;AF=0.75;STDEV_LEN=2.309;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:1:1:3:2 chr18 76967653 chr18-76967654-INS-82 C CTGAGATTTGTGATTTGGTGTTGGAGGTGGTGGTGTGCTCTGTGAGATTTGTGATTTGGTGTTAGGGGTGGTGATGTGATCTG 4 . ID=chr18-76967654-INS-82;SVTYPE=INS;SVLEN=82;TIG_REGION=h1tg003347l:10963-11044,h2tg003353l:42028-42109;QUERY_STRAND=-,-;HOM_REF=0,31;HOM_TIG=0,36;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=531.1 GT:DR:DV:GQ:SUPP 1/1:.:5:13:3 -chr18 76975154 chr18-76975155-INS-63 C CCTTTTCTTTTCTTTTCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT 4 . ID=chr18-76975155-INS-63;SVTYPE=INS;SVLEN=63;TIG_REGION=h1tg003347l:3396-3458;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,18;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=532.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,7:7:.:7:19:0,0,3,4:7 +chr18 76975154 chr18-76975155-INS-63 C CCTTTTCTTTTCTTTTCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT 4 . ID=chr18-76975155-INS-63;SVTYPE=INS;SVLEN=63;TIG_REGION=h1tg003347l:3396-3458;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,18;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=532.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,7:7:.:7:19:0,0,3,4:7 chr18 76975154 chr18-76975155-INS-52 C CCTTTTCTTTTTTTTCTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT 4 . ID=chr18-76975155-INS-52;SVTYPE=INS;SVLEN=52;TIG_REGION=h2tg003353l:34465-34516;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,10;AC=1 GT:SUPP 0/1:1 chr18 76998969 pbsv.DEL.1268 GGGGGGTTTAAGAGCAGTGTTTT G 2 PASS SVTYPE=DEL;SVLEN=-22;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:3,1,2,1:4 chr18 77027983 pbsv.INS.DUP.1269 T TTTATTTATTTATTTATTTATT 0 PASS SVTYPE=INS;SVLEN=21;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,7:14:5,2,2,5:4 @@ -1656,8 +1656,8 @@ chr18 77028738 pbsv.DEL.1270 CAGGCGGGGGGCTGATCCCCCCACCTCCCTCCCGGACGGGGTGGCTGCT C chr18 77029228 pbsv.DEL.1271 GCGAAACCCCGGCTCCACCAAAAAAATA G 2 PASS SVTYPE=DEL;SVLEN=-27;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,5:12:5,2,1,4:4 chr18 77036952 pbsv.DEL.1272 TTGGAGACTGAGCTGAGCAAGTGCTGGTCACGTTT T 2 PASS SVTYPE=DEL;SVLEN=-34;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,4,7:4 chr18 77044912 pbsv.INS.1273 T TAAGAAAATGTGAGTCTGGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGCCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2 PASS SVTYPE=INS;SVLEN=343;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,6:11:2,3,2,4:4 -chr18 77044931 chr18-77044932-INS-325 G GCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGCCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4 . ID=chr18-77044932-INS-325;SVTYPE=INS;SVLEN=325;TIG_REGION=h1tg014962l:55578-55902;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=533.0 GT:DR:DV:GQ:SUPP 0/1:5:6:33:3 -chr18 77045365 chr18-77045366-INS-87;pbsv.INS.1275 T TTGACCCGCTGCAGCAGCACCTGGCTGCACCAGGTCAGGGTCTCTGGAGCCCGGCTGCCAGCAGAGACATTTGCATGCGTCTCTGGAC 4 PASS ID=chr18-77045366-INS-87;SVTYPE=INS;SVLEN=87;TIG_REGION=h1tg014962l:56341-56427;QUERY_STRAND=+;HOM_REF=0,22;HOM_TIG=0,22;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=533.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:11:30:7 +chr18 77044931 chr18-77044932-INS-325 G GCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGCCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGACCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4 . ID=chr18-77044932-INS-325;SVTYPE=INS;SVLEN=325;TIG_REGION=h1tg014962l:55578-55902;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=533.0 GT:DR:DV:GQ:SUPP 1/0:5:6:33:3 +chr18 77045365 chr18-77045366-INS-87;pbsv.INS.1275 T TTGACCCGCTGCAGCAGCACCTGGCTGCACCAGGTCAGGGTCTCTGGAGCCCGGCTGCCAGCAGAGACATTTGCATGCGTCTCTGGAC 4 PASS ID=chr18-77045366-INS-87;SVTYPE=INS;SVLEN=87;TIG_REGION=h1tg014962l:56341-56427;QUERY_STRAND=+;HOM_REF=0,22;HOM_TIG=0,22;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=533.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:11:30:7 chr18 77045365 chr18-77045366-INS-87.1;pbsv.INS.1274 T TTGACCCGCTGCAGCAGCACCTGGCTGCACCAGGTCAGGGTCTCTGGAGCCTGGCTGCCAGCAGAGACATTTGCATGCGTCTCTGGAC 4 PASS ID=chr18-77045366-INS-87.1;SVTYPE=INS;SVLEN=87;TIG_REGION=h2tg018293l:94840-94926;QUERY_STRAND=-;HOM_REF=0,22;HOM_TIG=0,22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 0/1:6,5:11:2,4,2,3:5 chr18 77057814 chr18-77057815-DEL-301;pbsv.DEL.1276 GGCGGGGAGTGTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACTACGCCCGGCTAATTTTTTGTATTTTTTTTTTTAATAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTGTCGATCTCCTGACCTCGTGTTCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGA G 4 PASS ID=chr18-77057815-DEL-301;SVTYPE=DEL;SVLEN=-301;TIG_REGION=h1tg014962l:68886-68886,h2tg018293l:82368-82368;QUERY_STRAND=+,-;HOM_REF=0,16;HOM_TIG=0,16;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=534.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:8:22:7 chr18 77081813 pbsv.INS.1277 C CATATATACACACACACACATATATATACACACACT 2 PASS SVTYPE=INS;SVLEN=35;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,3:6:2,1,2,1:4 @@ -1666,11 +1666,11 @@ chr18 77093107 pbsv.INS.1279 C CAGAGCCCGCGTCCCCGGTGCCTG 2 PASS SVTYPE=INS;SVLEN= chr18 77115863 Sniffles2.INS.184S11 C CAGAGCCTTCCAGGTTCTAATCAAGGAAAAGAAGGCAATGTGTGGTCATTAACCTCACTGTGGTCCCTCAGAAGACCTGGCTCTGAGCTGTCTCCTGAGGGGCCCCACATCTTCACATGAGTGTGCAGCACTTTACTGGGCAACTGCCTTTCAGAACCTTCTGGAATTTT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=171;SUPPORT=4;COVERAGE=9,9,9,9,9;STRAND=+;AF=0.444;STDEV_LEN=0;STDEV_POS=28.284;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=536.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:6,4:10:2,4,4,0:6 chr18 77115893 chr18-77115894-DEL-171;pbsv.DEL.1281 GAAGGCAATGTGTGGTCATTAACCTCACTGTGGTCCCTCAGAAGACCTGGCTCTGAGCTGTCTCCTGAGGGGCCCCACATCTTCACATGAGTGTGCAGCACTTTACTGGGCAACTGCCTTTCAGAACCTTCTGGAACTTTCCAGAGTCTTCCAGGTTCTAATCAAGGAAAAT G 4 PASS ID=chr18-77115894-DEL-171;SVTYPE=DEL;SVLEN=-171;TIG_REGION=h2tg018293l:24397-24397;QUERY_STRAND=-;HOM_REF=0,153;HOM_TIG=0,153;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=536.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:5:26:7 chr18 77117809 Sniffles2.INS.185S11 C CAGTGGGTTGGAGTGGGATGGGTTGGAGTGGGACAGGGGACAGTGGGTTGGAGTGGGACGGGGGACATTGGGTTGGGGTGGGACGGGGGTCAGTGGGTTGGGGCGGGATGGGGGTCAGTGGGTTGGAGTGGGATGGGGGTCAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGGACAGTGGGTTGGGGTGGGACGGGGGACAGGGGGTTGGGGCGGGATGGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGTGGGATGGGGGACAGTGGGTTGGGGTGGGATGGGGATGGAGTGGGATGGGGGTCAGTGGGTTGGGGCGGGATGGGGACAGTGGG 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=391;SUPPORT=8;COVERAGE=8,8,8,8,8;STRAND=+-;AF=1;STDEV_LEN=10.751;STDEV_POS=146.003;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:22:0:8:2 -chr18 77118034 chr18-77118035-INS-386 C CGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGACAGTGGGTTGGGGTGGGATGGGGGACAGTGGGTTGGGGTGGGATGGGGACAGTGGGTTGGGGTGGGATGGGGGACAGTGGGTTGGGGTGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGAGTGGGATGGGGACAGTGGGTTGGGGTGGGACGGGGACAGGGGGTTGGGGCGGGATGGGGGACAGTGGGTTGGGGT 4 . ID=chr18-77118035-INS-386;SVTYPE=INS;SVLEN=386;TIG_REGION=h2tg018293l:22066-22451;QUERY_STRAND=-;HOM_REF=0,71;HOM_TIG=0,71;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=537.0 GT:AD:DP:SAC:SUPP 1/1:1,7:8:1,0,4,3:5 +chr18 77118034 chr18-77118035-INS-386 C CGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGACAGTGGGTTGGGGTGGGATGGGGGACAGTGGGTTGGGGTGGGATGGGGACAGTGGGTTGGGGTGGGATGGGGGACAGTGGGTTGGGGTGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGGGCGGGATGGGGACAGTGGGTTGGAGTGGGATGGGGACAGTGGGTTGGGGTGGGACGGGGACAGGGGGTTGGGGCGGGATGGGGGACAGTGGGTTGGGGT 4 . ID=chr18-77118035-INS-386;SVTYPE=INS;SVLEN=386;TIG_REGION=h2tg018293l:22066-22451;QUERY_STRAND=-;HOM_REF=0,71;HOM_TIG=0,71;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=537.0 GT:AD:DP:SAC:SUPP 0/1:1,7:8:1,0,4,3:5 chr18 77157072 pbsv.INS.1283 C CTTTCTTTCCTTCTTTCTTTTCTCTTTCTTCTTTC 2 PASS SVTYPE=INS;SVLEN=34;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:2,8:10:2,0,2,6:4 chr18 77161325 pbsv.INS.1284 T TTTTTTTGTTTTTTTTTTTAAATTTT 2 PASS SVTYPE=INS;SVLEN=25;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,3:9:3,3,1,2:4 chr18 77248112 Sniffles2.INS.186S11 G GTGGGTTTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTATTTTTTTTTTAAATTTTTTTTTTATTATACTTTAAGTTTTAGGGTACATGTGCACATTGTGCAGGTTAGTTACATATGTATACATGTGCCATGCTGGTGCGCTGCACCCACCAACGTGTCATCTATCATTAGGTATATCTCCCACTGCTATCCCTCCCCCCTCCCCCGACCCCACCACAGTCCCCAGAGTGTGATATTCCCCTTCCTGTGCCCTTGTGATCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGCGGTGTTTGGTTTTTTGTTCTTGCGATAGTTTACTGAGAATGATGGTTTCCAATTTCATCCATGTCCCTACAAAGGACATGAACTCATCATTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTG 3 PASS PRECISE;SVTYPE=INS;SVLEN=474;SUPPORT=4;COVERAGE=8,8,8,8,6;STRAND=+-;AF=0.5;STDEV_LEN=0.707;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=538.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:4,4:8:3,1,2,2:6 -chr18 77252896 chr18-77252897-INS-1275 T TCACCACCATCACCACCACCACCACCACCACCACCACCACCAGCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCATCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCATCACCACCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCATCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCTCCACCATCACCATCACCACCACCACCACCACCATCACCACCACCACCATCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACTGCCATCATCACCACCATCACCACCACCATCACCACCACCACCATCACCACCACCACCATCACCACCACCATCACCACCACCACTGCCATCATCACCACCATCACCACCACCATCATCACCACCACCATCATCACCGTCACCATCACCATCATCAGCACCACCATCATCAGCACCATCATCACCACCATCACCACCACCACCACCACCACCACCACCACCATCACCACCACCATCACCACCACCACCACCATCACCACCGTCATCACCGTCACCACCACCACCACCACCATGACCACCACCACCGTCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCATCAGCAGCACCACCACCACCACCACCACCACCACCACCATCACCACCATCACCACCACCATCACCACCATCACCACCACCACCACCACCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCACCATCATCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCATCAC 4 . ID=chr18-77252897-INS-1275;SVTYPE=INS;SVLEN=1275;TIG_REGION=h1tg005612l:34554-35828;QUERY_STRAND=+;HOM_REF=0,8;HOM_TIG=0,8;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=539.0 GT:AD:DP:SAC:SUPP 0/1:5,1:6:3,2,0,1:5 +chr18 77252896 chr18-77252897-INS-1275 T TCACCACCATCACCACCACCACCACCACCACCACCACCACCAGCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCATCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCATCACCACCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCATCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCTCCACCATCACCATCACCACCACCACCACCACCATCACCACCACCACCATCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACTGCCATCATCACCACCATCACCACCACCATCACCACCACCACCATCACCACCACCACCATCACCACCACCATCACCACCACCACTGCCATCATCACCACCATCACCACCACCATCATCACCACCACCATCATCACCGTCACCATCACCATCATCAGCACCACCATCATCAGCACCATCATCACCACCATCACCACCACCACCACCACCACCACCACCACCATCACCACCACCATCACCACCACCACCACCATCACCACCGTCATCACCGTCACCACCACCACCACCACCATGACCACCACCACCGTCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCATCAGCAGCACCACCACCACCACCACCACCACCACCACCATCACCACCATCACCACCACCATCACCACCATCACCACCACCACCACCACCACCACCATCACCACCACCACCATCACCACCACCACCACCACCACCACCATCATCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCACCATCAC 4 . ID=chr18-77252897-INS-1275;SVTYPE=INS;SVLEN=1275;TIG_REGION=h1tg005612l:34554-35828;QUERY_STRAND=+;HOM_REF=0,8;HOM_TIG=0,8;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=539.0 GT:AD:DP:SAC:SUPP 1/0:5,1:6:3,2,0,1:5 chr18 77256524 pbsv.INS.DUP.1287 C CAGAGTGCAGAGTGCAGAG 0 PASS SVTYPE=INS;SVLEN=18;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,2:8:3,3,1,1:4 chr18 77258602 chr18-77258603-INS-243 C CATGGTGGTGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTCATGGTGGTGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGGTCATAGTGGTGGTGGTGGTGGTCATGGTGGTGATGGTGATGGTGGTGGGTGGTGATGGTGGTGGTGGTCATGTGGTGGTGGTGGTGATGATGGCCATGGTGGTGATGGTAGTGATGGTGGTGATGATGGTGGTGATGATGGTCATGGTGGTG 4 . ID=chr18-77258603-INS-243;SVTYPE=INS;SVLEN=243;TIG_REGION=h1tg005612l:41593-41835;QUERY_STRAND=+;HOM_REF=0,44;HOM_TIG=0,44;AC=1 GT:SUPP 1/0:1 chr18 77258603 Sniffles2.INS.18AS11 A ATGGTGGTGATGGTGGTGGTGGTGATGGTGGTGATGGTGGTGGTGGTCATAGTGGTGGTGGTGGTGGTCATGGTGGTGATGGTGATGGTGGTGGGTGGTGATGGTGGTGGTGGTCATGTGGTGGTGGTGGTGATGATGGCCATGGTGGTGATGGTAGTGATGGTGGTGATGATGGTGGTGATGATGGTCATGGTGGTG 3 GT PRECISE;SVTYPE=INS;SVLEN=198;SUPPORT=2;COVERAGE=9,9,9,9,9;STRAND=+-;AF=0.222;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:0:7:2:2 @@ -1686,7 +1686,7 @@ chr18 77382207 pbsv.DEL.1294 TAAATAAAATAAAATAAAATAAAATA T 2 PASS SVTYPE=DEL;SVLE chr18 77393455 pbsv.DEL.1295 CTCTCTATATATATATATATA C 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,5:9:1,3,2,3:4 chr18 77545560 pbsv.DEL.1296 AATATATATATAATATATATTTTATATTTATAATATATAAAAT A 2 PASS SVTYPE=DEL;SVLEN=-42;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,2,3:4 chr18 77549560 Sniffles2.INS.18BS11 T TTCCTGGCTGTGACCAGACAACCCTAGTCTCTGCCTGTGTCTCACTCGGTG 3 PASS PRECISE;SVTYPE=INS;SVLEN=51;SUPPORT=4;COVERAGE=4,4,4,4,4;STRAND=+-;AF=1;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=543.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:0,4:4:0,0,1,3:6 -chr18 77555041 pbsv.DEL.1298 GTTTATATCCTTAGTCATTCATGGTGAAACAAATCATTGGGGAGAAAAATGAACAAAAAAACCCCAGAAGTTTTGTAAGTTCTAATATGCATAGGCTCTGGCTCTATTCTCTGGTGAGAAGGTTTCTGCTAGGCCCACAGTTTATAATATAAATACATATTTCTCTACACTCATGTAATCCAGAGGACCTGTAGATGAACTCCAGAGCTGTAATCAAGGTCAAATGACATCACGTGAAGACCCAGTGCTCAAAATATAACCACTAGTAATACACTGGAGCACATACTTGGAGATGTTTTGCTGATAGTTATAGGTAAAACTAAATTGTGTGTGTGTGTGTGTGTGTGTGTGCACATATATGTCTACATAAGTATACAGTCAGACTTTCATATCCTTGGGATTCACATCTGTGAATTCAAGCAACCTTGGATAAAAACTATTCGAAAAAAAATTGCATCTGTACTGAACATGTACAGGCTTTTTTACCTTGTCATTATTCCATAAACGATACAGTATAACAACTATTTATACATTTACATTTAATTAGATATCATAAGCAATCTAGAAATGATTCAAAGAGGTGGAATGGTGTGCATAGCTTATATGCAAATATTACACCATTTTATATCAGATACTTGAGCATCCATGGATTTTGGTACCATTGGGAGGTCCTGGAACCAATCCCACATGGACACCAAGGGATGACTGTATAATCTATGAGTATAACTGTATTTTTATCTATGTTATTATGTTGATAGCTACATAAAATTGCATTGTGTAGATGTATAATAATTTTTAACATTTATTTATTGAATATTTATTTCCACCAAGACACAGTAAACAACTTTGTGCATACATCTTTACATATTTAAACATCATTTCTAAAAAAATTAATTCACCAAAATTGGATTTTAGATGATAGATAGATAGATAGATACAGAGAGATAGATAGACAGATAGAGGATATGGTCTATATGGTTCATTAATGGCCCAATGATTAAAATCACTCATGATCCAAAGATTATGAGATCCAAATATATATATATGTAAAGTTGAACATAGTTTGATTTATATCATCATGATTTTTAGCAGCAAAGGTATAATTCTATACCTAAAGTACTAAGCTTTTATGAAGATTTTGTTTCTGTTTACTCTGAATTATC G 2 PASS SVTYPE=DEL;SVLEN=-1162;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=544.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:3:8:6 +chr18 77555041 pbsv.DEL.1298 GTTTATATCCTTAGTCATTCATGGTGAAACAAATCATTGGGGAGAAAAATGAACAAAAAAACCCCAGAAGTTTTGTAAGTTCTAATATGCATAGGCTCTGGCTCTATTCTCTGGTGAGAAGGTTTCTGCTAGGCCCACAGTTTATAATATAAATACATATTTCTCTACACTCATGTAATCCAGAGGACCTGTAGATGAACTCCAGAGCTGTAATCAAGGTCAAATGACATCACGTGAAGACCCAGTGCTCAAAATATAACCACTAGTAATACACTGGAGCACATACTTGGAGATGTTTTGCTGATAGTTATAGGTAAAACTAAATTGTGTGTGTGTGTGTGTGTGTGTGTGCACATATATGTCTACATAAGTATACAGTCAGACTTTCATATCCTTGGGATTCACATCTGTGAATTCAAGCAACCTTGGATAAAAACTATTCGAAAAAAAATTGCATCTGTACTGAACATGTACAGGCTTTTTTACCTTGTCATTATTCCATAAACGATACAGTATAACAACTATTTATACATTTACATTTAATTAGATATCATAAGCAATCTAGAAATGATTCAAAGAGGTGGAATGGTGTGCATAGCTTATATGCAAATATTACACCATTTTATATCAGATACTTGAGCATCCATGGATTTTGGTACCATTGGGAGGTCCTGGAACCAATCCCACATGGACACCAAGGGATGACTGTATAATCTATGAGTATAACTGTATTTTTATCTATGTTATTATGTTGATAGCTACATAAAATTGCATTGTGTAGATGTATAATAATTTTTAACATTTATTTATTGAATATTTATTTCCACCAAGACACAGTAAACAACTTTGTGCATACATCTTTACATATTTAAACATCATTTCTAAAAAAATTAATTCACCAAAATTGGATTTTAGATGATAGATAGATAGATAGATACAGAGAGATAGATAGACAGATAGAGGATATGGTCTATATGGTTCATTAATGGCCCAATGATTAAAATCACTCATGATCCAAAGATTATGAGATCCAAATATATATATATGTAAAGTTGAACATAGTTTGATTTATATCATCATGATTTTTAGCAGCAAAGGTATAATTCTATACCTAAAGTACTAAGCTTTTATGAAGATTTTGTTTCTGTTTACTCTGAATTATC G 2 PASS SVTYPE=DEL;SVLEN=-1162;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=544.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:3:8:6 chr18 77650647 pbsv.INS.1299 T TCCATCCATCCATCCATCCAC 2 PASS SVTYPE=INS;SVLEN=20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,0,3:4 chr18 77670222 Sniffles2.DEL.381S11 GGGCAGAGACTGGTGTGGGGCGTAGACTGGCATGGGGCAGAGACTGGTGTGGGGCATAGACTGGCATGGGGCAGAGACTGGCATGGGGCAGAGACTGGCGTGGGGCAGAGACTGGTGTGGGGCATAGACTGGCATGGGGCAGAGACTGGTGTGGGGCATAGACTGGCATGGAGCAGAGACTGGCGTGG G 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-187;SUPPORT=3;COVERAGE=3,3,3,3,3;STRAND=-;AF=1;STDEV_LEN=0.577;STDEV_POS=8.66;AC=2 GT:GQ:DR:DV:SUPP 1/1:8:0:3:2 chr18 77670336 pbsv.DEL.1300 GTGTGGGGCATAGACTGGCATGGGGCAGAGACTGGTGTGGGGCATAGACTGGCATGGAGCAGAGACTGGCGTGGGGCAGAGACTGGCATGGGGCAGAGACTGGCGTGGGGCAGAGACTGGTGTGGGGCGTAGACTGGCATGGGGCAGAGACTGGTGTGGGGCATAGACTGGCATGGGGCAGAGACTGGCATGGGGCAGAGACTGGCGTGGGGCAGAGACTGGTGTGGGGCGTAGACTGGCATGGGGCAGAGACTGGTGTGGGGCATAGACTGG G 2 PASS SVTYPE=DEL;SVLEN=-272;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,0,3:4 @@ -1703,7 +1703,7 @@ chr18 77926771 Sniffles2.DEL.388S11 TGATTAATTATATATTAATCATACATTATATCATATAATCATAT chr18 77926815 chr18-77926816-DEL-60 AATATTATATATATATATTATATATAATATATATGATATATATATAATATATCATATATAT A 4 . ID=chr18-77926816-DEL-60;SVTYPE=DEL;SVLEN=-60;TIG_REGION=h1tg024234l:3468-3468,h2tg001461l:205973-205973;QUERY_STRAND=+,-;HOM_REF=0,0;HOM_TIG=0,0;AC=2 GT:SUPP 1/1:1 chr18 77927154 pbsv.INS.1309 T TTATATATAAAATATGTTGCATTTTATATATTTA 2 PASS SVTYPE=INS;SVLEN=33;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:0,1,3,1:4 chr18 77928821 pbsv.INS.1310 T TTTAGAATATTTATTCTAATACTATAGAATATTAAATAT 2 PASS SVTYPE=INS;SVLEN=38;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,3,2:4 -chr18 77957441 chr18-77957442-INS-100 A ACAACTCCAACACCACCACCACCAGCACCACCAATAACACTATCACCCCAACAACTCCAACACCACCACCAACACCAGCACCACCAATAACACTATCACCC 4 . ID=chr18-77957442-INS-100;SVTYPE=INS;SVLEN=100;TIG_REGION=h1tg024234l:33870-33969;QUERY_STRAND=+;HOM_REF=0,21;HOM_TIG=0,21;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=547.0 GT:DR:DV:GQ:SUPP 1/1:.:5:13:3 +chr18 77957441 chr18-77957442-INS-100 A ACAACTCCAACACCACCACCACCAGCACCACCAATAACACTATCACCCCAACAACTCCAACACCACCACCAACACCAGCACCACCAATAACACTATCACCC 4 . ID=chr18-77957442-INS-100;SVTYPE=INS;SVLEN=100;TIG_REGION=h1tg024234l:33870-33969;QUERY_STRAND=+;HOM_REF=0,21;HOM_TIG=0,21;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=547.0 GT:DR:DV:GQ:SUPP 1/0:.:5:13:3 chr18 77957441 chr18-77957442-INS-96 A ACTCCAACACCACCACCACGAGCACCCCAAAAACACTATCACCCCAACAACTCCAACACCACCACCAACACCAGCACCACCAATAACACTATCACCC 4 . ID=chr18-77957442-INS-96;SVTYPE=INS;SVLEN=96;TIG_REGION=h2tg001461l:175280-175375;QUERY_STRAND=-;HOM_REF=0,1;HOM_TIG=0,1;AC=1 GT:SUPP 0/1:1 chr18 77957621 chr18-77957622-INS-256 C CCCCCAATAACACTATCACCCCAACAACTCCAACACCACTGCCAACACCAGCACCCCCAAAAACACTACCACCCCAACAACTCCAACACCACCACCACCAGCACCCCCCAATAACACTATCACCCCAACTCCAACACCACCACCACCAGCACCCCCAATAACACTATCACCCCAACAACTCCAACACCACCGCCACCACCAGCACCCCCAATAACACTATCACCCCAACAACTCCAACACCACTGCCAACACCAGCA 4 . ID=chr18-77957622-INS-256;SVTYPE=INS;SVLEN=256;TIG_REGION=h1tg024234l:34148-34403,h2tg001461l:174846-175100;QUERY_STRAND=+,-;HOM_REF=0,6;HOM_TIG=0,6;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=547.2 GT:DR:DV:GQ:SUPP 1/1:.:5:13:3 chr18 77957817 pbsv.INS.1311 C CCACCACCAGCACCCCCAATAACACTATCACCCCAACTCCAACACCACCACCACCAGCACCCCCAATAACACTATCACCCCAACAACTCCAACACCACCGCCACCACCAGCACCCCCAATAACACTATCACCCCAACAACTCCAACACCACTGCCAACACCAGCACCCCAAAAACACTATCACCCCAACAACTCCAACACCAACGCCAACACCAGCAGCCCAATAACACTATCACCCCAACAACCCCAACACCACCGCCAACACCAGCACCACCAATATCACTATCATCCCAACAACTCCAACACCACTGCCAACACCAGCACCCCAAAAACACTATCACCCCAACAACTCCAACACCACTGCCAACACCAGCACCGCAAAAACACTATCACCCCAACAACTCCAACACCACCACCACCAGCACCCCCAATAACACTATCACCCCAACAACTCCAACACCAC 2 PASS SVTYPE=INS;SVLEN=461;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,2,3:4 @@ -1730,7 +1730,7 @@ chr18 78276169 chr18-78276170-INS-210 C CCCTGTATATATATACATATATATATATACACCCTGTATA chr18 78276169 pbsv.INS.1329 C CCCTGTATATATATACATATATATATATATACACCCTGTATATATATACATATATATATATACACCCTGTATATATACATATATATATATACACCCTGTATATATATACATATATATATACACCCTGTATATATACATATATATATACACCCTGTATATATACATATATATACACCCTGTATATATATACATATATATATATATACACCCTGTATATATATACATATATATATATACACCCTGTATATATATACATATATATATATATACACCCTGTATATATATACATATATATATACACCCTGTATATATATACATATATATATATACACCCTGTATATATATACATATATATATATACACCCTGTATATATATACATATATATACACCCTGTATATATACATATATATATACA 2 PASS SVTYPE=INS;SVLEN=415;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:0,2,1,1:4 chr18 78276225 pbsv.INS.1330 C CACCCTGTATATATATACATATATATATATACACCCTGTATATATATACATATATATATATACACCCTGATATATATACATATATATATACACCCTGTATATATATACATATATATATACACCCTGTATATATATACATATATATATATACACCCTGTATATATATACATATATATATATACACCCTGTATAATATACATATATATATATACACCCTGTATATATATACATATATATATATACACCCTGTATATATATACAT 2 PASS SVTYPE=INS;SVLEN=261;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,2:4:1,1,0,2:4 chr18 78276442 Sniffles2.INS.19AS11 T TGTATATATATACACCCTGTATATATATACATGTATATATATACACCCTGTATATATATACATGTATATATATACACCCTGTATATATATACATGTATATATATACACCCTGTATATATATATACATGTATATATATACACCCTGTATATATATACATG 3 PASS PRECISE;SVTYPE=INS;SVLEN=159;SUPPORT=2;COVERAGE=4,4,4,4,4;STRAND=-;AF=0.5;STDEV_LEN=21.92;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:2:2:2 -chr18 78280930 chr18-78280931-INS-133;pbsv.INS.1331 G GTTGATATCTATTTATACTACACTGTGTTCCAAGAGTGTGGTTGGTATGATTTAAATGTTTTTGGATGTATCGAGCCTTGCTTTATGGCTGAGCATGTGCTTGACCTTAGAGTATGTGAGAGATCTTCTTGGTA 4 PASS ID=chr18-78280931-INS-133;SVTYPE=INS;SVLEN=133;TIG_REGION=h1tg010878l:106454-106586,h2tg010516l:54661-54793;QUERY_STRAND=-,+;HOM_REF=0,116;HOM_TIG=0,116;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=558.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:4:18:7 +chr18 78280930 chr18-78280931-INS-133;pbsv.INS.1331 G GTTGATATCTATTTATACTACACTGTGTTCCAAGAGTGTGGTTGGTATGATTTAAATGTTTTTGGATGTATCGAGCCTTGCTTTATGGCTGAGCATGTGCTTGACCTTAGAGTATGTGAGAGATCTTCTTGGTA 4 PASS ID=chr18-78280931-INS-133;SVTYPE=INS;SVLEN=133;TIG_REGION=h1tg010878l:106454-106586,h2tg010516l:54661-54793;QUERY_STRAND=-,+;HOM_REF=0,116;HOM_TIG=0,116;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=558.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:3:4:18:7 chr18 78299647 pbsv.INS.1332 C CTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATA 2 PASS SVTYPE=INS;SVLEN=40;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,6,3:4 chr18 78370003 Sniffles2.DEL.38CS11 CCATCATGACCCCTACAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGACAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGACAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAAGGACCATCATGACCCCTACAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAA C 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-1651;SUPPORT=3;COVERAGE=8,8,7,7,7;STRAND=+-;AF=0.429;STDEV_LEN=0.577;STDEV_POS=1.155;AC=1 GT:GQ:DR:DV:SUPP 0/1:18:4:3:2 chr18 78370095 chr18-78370096-DEL-2573 AACTGTGACCTGGACAGAAGGAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGACAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGACAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAAGGACCATCATGACCCCTACAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACGACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGAGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATG A 4 . ID=chr18-78370096-DEL-2573;SVTYPE=DEL;SVLEN=-2573;TIG_REGION=h1tg010878l:17239-17239,h2tg010516l:144194-144194;QUERY_STRAND=-,+;HOM_REF=0,21;HOM_TIG=0,21;AC=2 GT:SUPP 1/1:1 @@ -1738,15 +1738,15 @@ chr18 78370107 Sniffles2.DEL.38DS11 GACAGAAGGAGGACCATCATGACACCTAGAACTGTGACCTGGGC chr18 78370301 pbsv.DEL.1333 GCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGAAGGACCATCATGACCCCTACAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACGACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGAGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGAACCAACATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGA G 2 PASS SVTYPE=DEL;SVLEN=-2807;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,3,5:4 chr18 78372106 Sniffles2.DEL.38FS11 CAGAAGGACCATCATGACCCCTACAACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGAGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCACGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGAACCAACATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACCCCTACGACTGTGACCTGGAC C 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-1117;SUPPORT=6;COVERAGE=7,7,7,8,8;STRAND=+-;AF=0.857;STDEV_LEN=21.939;STDEV_POS=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:6:1:6:2 chr18 78372837 chr18-78372838-DEL-237 AAGGAGGACCATCATGACCCCTATGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGAGAACCAACATGACCCCTACGACTGTGACCTGGACAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGGACCATCATGACACCTAGAACTGTGACCTGGGCAGAAGG A 4 . ID=chr18-78372838-DEL-237;SVTYPE=DEL;SVLEN=-237;TIG_REGION=h1tg010878l:17070-17070;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=1 GT:SUPP 1/0:1 -chr18 78390337 chr18-78390338-INS-722;pbsv.INS.1334 G GAGAGAGAGGGAGGAGGGGGAGGAGAGGGAAAGGGAGAAAAGGGAGGGAGAGAGAGGATAGGAGAGAGAGGGAGGAGAGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGAGGGGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGGAGAGAGAGGGAGGAGGGGGAAGAGAGGGAAAGGGAGAAAAGGGAGGGAGAGAGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGATAGGAGAGAGAGGGAGGAGAGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGAGGGGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGGAGAGAGAGGGAGGAGGGGGAAGAGAGGGAAAGGGAGAAAAGGGAGGGAGAGAGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGAGGGGAGAGAGGAAGGAGAGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGAGGACAGGAGA 4 PASS ID=chr18-78390338-INS-722;SVTYPE=INS;SVLEN=722;TIG_REGION=h2tg010516l:161316-162037;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=560.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 +chr18 78390337 chr18-78390338-INS-722;pbsv.INS.1334 G GAGAGAGAGGGAGGAGGGGGAGGAGAGGGAAAGGGAGAAAAGGGAGGGAGAGAGAGGATAGGAGAGAGAGGGAGGAGAGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGAGGGGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGGAGAGAGAGGGAGGAGGGGGAAGAGAGGGAAAGGGAGAAAAGGGAGGGAGAGAGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGATAGGAGAGAGAGGGAGGAGAGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGAGGGGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGGAGAGAGAGGGAGGAGGGGGAAGAGAGGGAAAGGGAGAAAAGGGAGGGAGAGAGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGAGGGGAGAGAGGAAGGAGAGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGAAGAGAGAGGAGGACAGGAGAGAGAGGGAGGAGGGAGAGAGAGGAGGACAGGAGA 4 PASS ID=chr18-78390338-INS-722;SVTYPE=INS;SVLEN=722;TIG_REGION=h2tg010516l:161316-162037;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=560.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:5:13:7 chr18 78393240 pbsv.INS.DUP.1335 T TGTGTGTGTGTGTGTGT 0 PASS SVTYPE=INS;SVLEN=16;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,6,1:4 chr18 78400720 pbsv.DEL.1336 TAGGAATTCAAATCAGGGCATAGAAGCAACACGATGTCCATAATGCATA T 2 PASS SVTYPE=DEL;SVLEN=-48;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,4:6:2,0,3,1:4 chr18 78403140 pbsv.INS.1337 G GTGACTCTGCAGCTGCTCTGCATGTCCCACACTTGTGTACCTGCC 2 PASS SVTYPE=INS;SVLEN=44;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 78403153 Sniffles2.INS.19ES11 T TTCTCTGCGTGTCCCACACTTGTGTACCTGCCTGACTCTGCAGCTGCTCTGCGTGTCCCACACTTGTGTACCTGCCTGACTCTGCAGG 3 PASS PRECISE;SVTYPE=INS;SVLEN=88;SUPPORT=2;COVERAGE=6,6,6,6,6;STRAND=+;AF=0.333;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:8:4:2:2 chr18 78409617 chr18-78409618-DEL-231;pbsv.DEL.1338 GCACACACTGAATGACGAGAGATGAGCCCAGGTCCCCATGATGGTGGGCAACGTCTTGCTGAGCCCGGGAGGCCCCCGCACACACTGAATGACGAGAGATGAGCCCAGGTCCCCATGATGGTGGGCAACGTCTTGCTGAGCCTGGGAGGCCCCCGCACACACTGAATGACGAGAGATGAGCCCAGGTCCCCATGATGGTGGGCAACGTCTTGCTGAGCCCGGGAGGCCCCCA G 4 PASS ID=chr18-78409618-DEL-231;SVTYPE=DEL;SVLEN=-231;TIG_REGION=h2tg010516l:181325-181325;QUERY_STRAND=+;HOM_REF=0,10;HOM_TIG=0,10;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=562.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:1:4:1:7 -chr18 78422024 chr18-78422025-INS-71 A ATGCATCCTCTTTGTCGGCGTGGAGGCCTGCTGTAACACAGACACCTGCACCACGCAGGCATTGCACTCACG 4 . ID=chr18-78422025-INS-71;SVTYPE=INS;SVLEN=71;TIG_REGION=h2tg010516l:193504-193574;QUERY_STRAND=+;HOM_REF=0,13;HOM_TIG=0,13;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=563.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,2,3:7 -chr18 78429574 chr18-78429575-INS-108;pbsv.INS.1340 T TGGGACCCATGACATTCCCAGTCCCAAGGACAGCACTGGGGTCAGGGATGCTCGTGGGACCCATGACATTCCCAGTCCCAAGGACAGCACTGGGGTCAGGGATGCTCGA 4 PASS ID=chr18-78429575-INS-108;SVTYPE=INS;SVLEN=108;TIG_REGION=h2tg010516l:201116-201223;QUERY_STRAND=+;HOM_REF=0,107;HOM_TIG=0,107;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=564.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 -chr18 78431097 chr18-78431098-DEL-175 CTCATTGTCTCCCTCCATCTCTCTCTGCCTGTGTCTGTCTCTGTCTCCCCCCCTCTCTCTCTCATTTTCTCCCTCCATCTCTCTCTGCCTGTGTCTGTCTCTGTCTCCCCCTCTCTCTCTTTATTCCCCCATCTCTCTCTGCCTGTGTCTGTCTCTGTCTCCCCCTCTCTCTCCCA C 4 . ID=chr18-78431098-DEL-175;SVTYPE=DEL;SVLEN=-175;TIG_REGION=h2tg010516l:202745-202745;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=565.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,2,3:7 +chr18 78422024 chr18-78422025-INS-71 A ATGCATCCTCTTTGTCGGCGTGGAGGCCTGCTGTAACACAGACACCTGCACCACGCAGGCATTGCACTCACG 4 . ID=chr18-78422025-INS-71;SVTYPE=INS;SVLEN=71;TIG_REGION=h2tg010516l:193504-193574;QUERY_STRAND=+;HOM_REF=0,13;HOM_TIG=0,13;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=563.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,5:5:.:5:13:0,0,2,3:7 +chr18 78429574 chr18-78429575-INS-108;pbsv.INS.1340 T TGGGACCCATGACATTCCCAGTCCCAAGGACAGCACTGGGGTCAGGGATGCTCGTGGGACCCATGACATTCCCAGTCCCAAGGACAGCACTGGGGTCAGGGATGCTCGA 4 PASS ID=chr18-78429575-INS-108;SVTYPE=INS;SVLEN=108;TIG_REGION=h2tg010516l:201116-201223;QUERY_STRAND=+;HOM_REF=0,107;HOM_TIG=0,107;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=564.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:.:5:13:7 +chr18 78431097 chr18-78431098-DEL-175 CTCATTGTCTCCCTCCATCTCTCTCTGCCTGTGTCTGTCTCTGTCTCCCCCCCTCTCTCTCTCATTTTCTCCCTCCATCTCTCTCTGCCTGTGTCTGTCTCTGTCTCCCCCTCTCTCTCTTTATTCCCCCATCTCTCTCTGCCTGTGTCTGTCTCTGTCTCCCCCTCTCTCTCCCA C 4 . ID=chr18-78431098-DEL-175;SVTYPE=DEL;SVLEN=-175;TIG_REGION=h2tg010516l:202745-202745;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=565.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:0,5:5:.:5:13:0,0,2,3:7 chr18 78437499 Sniffles2.INS.1A2S11 G GAGAGCATGGTGTGAGTGTCTACACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCAGAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCAGAGCAGTAAC 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=140;SUPPORT=2;COVERAGE=6,6,6,6,7;STRAND=+;AF=0.333;STDEV_LEN=0.707;STDEV_POS=130.108;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:8:4:2:2 chr18 78437507 chr18-78437508-INS-1470 T TGGTGTGAGTGTCTACACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCAGAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCAGAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACACCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCAGAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACACCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACACCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGC 4 . ID=chr18-78437508-INS-1470;SVTYPE=INS;SVLEN=1470;TIG_REGION=h2tg010516l:208982-210451;QUERY_STRAND=+;HOM_REF=0,13;HOM_TIG=0,13;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=566.0 GT:AD:DP:SAC:SUPP 0/1:3,3:6:1,2,2,1:5 chr18 78437814 Sniffles2.INS.1A4S11 G GAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACACCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACACCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGCGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAGGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCAGAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAACGAGAGCAGTGGTGTGAGTGTCTTCACAGCAGTAAC 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=1435;SUPPORT=3;COVERAGE=6,7,7,7,5;STRAND=+-;AF=0.429;STDEV_LEN=60.044;STDEV_POS=64.663;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:18:4:3:2 @@ -1757,9 +1757,9 @@ chr18 78486472 chr18-78486473-INS-297 G GCCTCCTCCTGATGGGTGGCCAAGTCCACACTCTGCGCCT chr18 78490608 chr18-78490609-DEL-74 TGAACTTACGCAAAATCCTCAACAAATATTATCACATTATATAAGAAAATGTGGCACATATACACCATAGACTGC T 4 . ID=chr18-78490609-DEL-74;SVTYPE=DEL;SVLEN=-74;TIG_REGION=h2tg008125l:27362-27362;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 0/1:1 chr18 78494267 pbsv.DEL.1347 TGCCATCCCCCTCAGTGTGTC T 2 PASS SVTYPE=DEL;SVLEN=-20;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,5:5:0,0,3,2:4 chr18 78502800 chr18-78502801-INS-987;pbsv.INS.1349 C CGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGCCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGCCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGCCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCT 4 PASS ID=chr18-78502801-INS-987;SVTYPE=INS;SVLEN=987;TIG_REGION=h2tg008125l:14269-15255;QUERY_STRAND=-;HOM_REF=0,46;HOM_TIG=0,46;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=570.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:4:26:7 -chr18 78502800 chr18-78502801-INS-658;pbsv.INS.1348 C CGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGCCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCT 4 PASS ID=chr18-78502801-INS-658;SVTYPE=INS;SVLEN=658;TIG_REGION=h1tg002297l:39255-39912;QUERY_STRAND=+;HOM_REF=0,46;HOM_TIG=0,46;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=570.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:6:3:13:7 -chr18 78504365 chr18-78504366-DEL-51;pbsv.DEL.1350 CCCTGAGGATGCCAGCCCGACAGAGCACGGTGTCGGCCAGGAGGAGGATGGA C 4 PASS ID=chr18-78504366-DEL-51;SVTYPE=DEL;SVLEN=-51;TIG_REGION=h1tg002297l:41478-41478;QUERY_STRAND=+;HOM_REF=0,28;HOM_TIG=0,28;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=571.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:5:5:36:7 -chr18 78513047 chr18-78513048-INS-51;pbsv.INS.1351 C CCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGAT 4 PASS ID=chr18-78513048-INS-51;SVTYPE=INS;SVLEN=51;TIG_REGION=h1tg002297l:50094-50144,h2tg008125l:3992-4042;QUERY_STRAND=+,-;HOM_REF=0,85;HOM_TIG=0,85;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=572.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:1:5:3:7 +chr18 78502800 chr18-78502801-INS-658;pbsv.INS.1348 C CGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCCGCTGTACCGGGACAGGGCATGGCCGCCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCTGCTGTACCGGGACAGGGCATGGCCGTCTCGATCCTTAGCGCTGGCCT 4 PASS ID=chr18-78502801-INS-658;SVTYPE=INS;SVLEN=658;TIG_REGION=h1tg002297l:39255-39912;QUERY_STRAND=+;HOM_REF=0,46;HOM_TIG=0,46;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=570.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:6:3:13:7 +chr18 78504365 chr18-78504366-DEL-51;pbsv.DEL.1350 CCCTGAGGATGCCAGCCCGACAGAGCACGGTGTCGGCCAGGAGGAGGATGGA C 4 PASS ID=chr18-78504366-DEL-51;SVTYPE=DEL;SVLEN=-51;TIG_REGION=h1tg002297l:41478-41478;QUERY_STRAND=+;HOM_REF=0,28;HOM_TIG=0,28;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=571.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:5:5:36:7 +chr18 78513047 chr18-78513048-INS-51;pbsv.INS.1351 C CCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGAT 4 PASS ID=chr18-78513048-INS-51;SVTYPE=INS;SVLEN=51;TIG_REGION=h1tg002297l:50094-50144,h2tg008125l:3992-4042;QUERY_STRAND=+,-;HOM_REF=0,85;HOM_TIG=0,85;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=572.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:5:3:7 chr18 78513098 Sniffles2.INS.1AAS11 T GTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCCAAGT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=257;SUPPORT=2;COVERAGE=5,5,6,7,7;STRAND=-;AF=0.333;STDEV_LEN=37.477;STDEV_POS=10.607;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:8:4:2:2 chr18 78513230 pbsv.SPLIT.DUP.1352 C CCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAACCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCC 0 PASS SVTYPE=INS;SVLEN=1683;NotFullySpanned;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:1,6,0,1:4 chr18 78513435 pbsv.INS.DUP.1353 C CAAGAGTCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAACCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACC 0 PASS SVTYPE=INS;SVLEN=1477;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:0,7,1,0:4 @@ -1768,20 +1768,20 @@ chr18 78513842 chr18-78513843-INS-153 G GCAAGAGTCAGCCTATCTAGACCTACTACAGTGGGTCAGC chr18 78513929 Sniffles2.INS.1ACS11 T GTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=53;SUPPORT=3;COVERAGE=7,9,9,9,9;STRAND=+-;AF=0.333;STDEV_LEN=1.155;STDEV_POS=35.557;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:13:6:3:2 chr18 78514043 chr18-78514044-INS-102 G GCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTA 4 . ID=chr18-78514044-INS-102;SVTYPE=INS;SVLEN=102;TIG_REGION=h2tg008125l:2742-2843;QUERY_STRAND=-;HOM_REF=0,18;HOM_TIG=0,50;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=572.2 GT:DR:DV:GQ:SUPP 0/1:5:2:6:3 chr18 78514114 Sniffles2.INS.1ADS11 T TAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGGTCAGCCTATC 3 PASS PRECISE;SVTYPE=INS;SVLEN=52;SUPPORT=3;COVERAGE=7,9,9,9,4;STRAND=-;AF=0.333;STDEV_LEN=0.577;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:13:6:3:2 -chr18 78514220 chr18-78514221-INS-2040 C CCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGTT 4 . ID=chr18-78514221-INS-2040;SVTYPE=INS;SVLEN=2040;TIG_REGION=h1tg002297l:51320-53359;QUERY_STRAND=+;HOM_REF=0,29;HOM_TIG=0,29;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=572.3 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,0,2:5 +chr18 78514220 chr18-78514221-INS-2040 C CCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATTTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGATCTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGTT 4 . ID=chr18-78514221-INS-2040;SVTYPE=INS;SVLEN=2040;TIG_REGION=h1tg002297l:51320-53359;QUERY_STRAND=+;HOM_REF=0,29;HOM_TIG=0,29;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=572.3 GT:AD:DP:SAC:SUPP 1/0:4,2:6:2,2,0,2:5 chr18 78514605 Sniffles2.INS.1AFS11 C CCCCAAGCATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTG 3 PASS PRECISE;SVTYPE=INS;SVLEN=51;SUPPORT=2;COVERAGE=9,8,4,4,4;STRAND=+-;AF=0.5;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:2:2:2 chr18 78514884 Sniffles2.INS.1B3S11 C CTACTAACAGTGGGTCAGCAGACACTACCCCAAGTATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGCATCAGCCTATCTAGTTCTACTAACAGTGGGTCAGCAGACACTACCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAGTCAGGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTACCGCAAGAGTCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGCACTACCCCCAAGAATCAGCCTATCTAGACCTACTAACAGTGGGTCAGCAGACACTGCCCCAAGAATCAGCCTATTTAGAC 3 PASS PRECISE;SVTYPE=INS;SVLEN=410;SUPPORT=2;COVERAGE=9,4,4,4,4;STRAND=-;AF=0.5;STDEV_LEN=2.121;STDEV_POS=0;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:2:2:2 chr18 78516935 chr18-78516936-INS-164 T TGTTTTCCAAGTTGGACTCTGTAAAGTCCCAGAAATCCACAAGATTTTCATTCCTTATATTCATGTTGGACACTGTTACTGAAGAACCACGTTCCTTTTATCCTGGAGGAAAGAGGACGGGTCATGTGGCTGTACCTGCACCTCATCGCCCTTGGCCCAACCCCA 4 . ID=chr18-78516936-INS-164;SVTYPE=INS;SVLEN=164;TIG_REGION=h1tg002297l:56074-56237;QUERY_STRAND=+;HOM_REF=0,168;HOM_TIG=0,168;AC=1 GT:SUPP 1/0:1 chr18 78517726 chr18-78517727-INS-82 T TTGTCTCGGAAGCGGGGCCCTCAGGCACAGAGCCCGCCGCCTTGTCCCGGAAGCGGGGCCGTCAGGCACAGAGCCCGGCGCCC 4 . ID=chr18-78517727-INS-82;SVTYPE=INS;SVLEN=82;TIG_REGION=h1tg002297l:57070-57151;QUERY_STRAND=+;HOM_REF=0,4;HOM_TIG=0,59;AC=1 GT:SUPP 1/0:1 chr18 78517827 pbsv.INS.1357 G GTCAGGCACAGAGCCCGGCGCCCTGTCTCGGAAGCGGGGCCCTCAGGCACAGAGCCCGCCGCCTTGTCCCGGAAGCGGGGCCCTCAGGCACAGAGCCCGGCGCCTTGTCCCGGAAGCAAGGCCT 2 PASS SVTYPE=INS;SVLEN=123;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:0,4,0,1:4 -chr18 78517828 Sniffles2.INS.1B5S11 T TCAGGCACAGAGCCCGGCGCCCTGTCTCGGAAGCGGGGCCCTCAGGCACAGAGCCCGCCGCCTTGTCCCGGAAGCGGGGCCGTCAGGCACAGAGCCCGGCGCCTTGTCTCGGAAGCGGGGCCCTCAGGCACAGAGCCCGCCGCCTTGTCCCGGAAGCGGGGCCGTCAGGCACAGAGCCCGGCGCCCTGTCTCGGAAGCGGGGCCCTCAGGCACAGAGCCCGCCGCCTTGTCCCGGAAGCGGGGCCCTCAGGCACAGAGCCCGGCGCCTTGTCCCGGAAGCAAGGCCT 3 PASS PRECISE;SVTYPE=INS;SVLEN=288;SUPPORT=4;COVERAGE=5,5,4,4,3;STRAND=-;AF=1;STDEV_LEN=0.707;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=574.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:3,2:5:0,3,0,2:6 +chr18 78517828 Sniffles2.INS.1B5S11 T TCAGGCACAGAGCCCGGCGCCCTGTCTCGGAAGCGGGGCCCTCAGGCACAGAGCCCGCCGCCTTGTCCCGGAAGCGGGGCCGTCAGGCACAGAGCCCGGCGCCTTGTCTCGGAAGCGGGGCCCTCAGGCACAGAGCCCGCCGCCTTGTCCCGGAAGCGGGGCCGTCAGGCACAGAGCCCGGCGCCCTGTCTCGGAAGCGGGGCCCTCAGGCACAGAGCCCGCCGCCTTGTCCCGGAAGCGGGGCCCTCAGGCACAGAGCCCGGCGCCTTGTCCCGGAAGCAAGGCCT 3 PASS PRECISE;SVTYPE=INS;SVLEN=288;SUPPORT=4;COVERAGE=5,5,4,4,3;STRAND=-;AF=1;STDEV_LEN=0.707;STDEV_POS=0;SUPPORT_LONG=0;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=574.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 1/1:.:.:.:3,2:5:0,3,0,2:6 chr18 78536322 chr18-78536323-INS-73 G GTTCCTGCTGTTTAAGCTAGGAAGGCTGTTGTATTTCCTTACGGCAGCCCAGCAAACTGATGCCCTTTACCAGA 4 . ID=chr18-78536323-INS-73;SVTYPE=INS;SVLEN=73;TIG_REGION=h1tg002297l:75706-75778;QUERY_STRAND=+;HOM_REF=0,75;HOM_TIG=0,75;AC=1 GT:SUPP 1/0:1 chr18 78546923 pbsv.INS.1359 T TGGAGGGGGGAGGGAGGGTGGGGGGGAGGAGAGGGTGGAGGGGGGAGGAGAGGGTGGAGGGGTGAGGAGAGGGA 2 PASS SVTYPE=INS;SVLEN=73;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,1,3:4 chr18 78546961 chr18-78546962-INS-56 T TGGAGGGGGGAGGAGAGGGAGGAGGGGGGAGGAGAGGGTGGAGGGGGAGGAGAGGGA 4 . ID=chr18-78546962-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h1tg002297l:86411-86466;QUERY_STRAND=+;HOM_REF=0,13;HOM_TIG=0,13;AC=1 GT:SUPP 1/0:1 chr18 78546974 Sniffles2.INS.1B6S11 A GAGGGTGGAGGGGTGAGGAGAGGGAGGAGGGGGGAGGAGAGGGTGGAGGGGGAGGAGAGGGAGGAGGGGGGAGG 3 PASS PRECISE;SVTYPE=INS;SVLEN=74;SUPPORT=4;COVERAGE=4,4,4,4,4;STRAND=+-;AF=1;STDEV_LEN=12.728;STDEV_POS=8.485;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:11:0:4:2 chr18 78548660 Sniffles2.INS.1B7S11 A ACTGCACACACACTCTGTACACACGCACACACCCACGCAACACTGTACAC 3 PASS PRECISE;SVTYPE=INS;SVLEN=51;SUPPORT=2;COVERAGE=4,4,4,4,4;STRAND=-;AF=0.5;STDEV_LEN=0.707;STDEV_POS=9.899;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=577.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:3,1:4:1,2,0,1:6 chr18 78563800 pbsv.INS.1361 C CTCTCAAACCCCCACACCCCACACCCCTCAAACCCCCACACCCCACACCCCCACACCCCTCAAACCCCCACACCCCACACCCCCACATCCCACACCCCACACTCCTCAAACCTCCACACCCCACACCCCCACATCCCACACCCCACACTCCTCAAACCTCCACACCCCACACCCCACACTCTGCACCCCTCAAACCCCCACACCTCTCAAACCCCCACACCCCACACCCCTCAAACCCCCACACCCCACACCCCCACACCCC 2 PASS SVTYPE=INS;SVLEN=261;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,2,2:4 -chr18 78563824 chr18-78563825-INS-184 C CTCAAACCCCCACACCCCCACACCCCCACACCCCTCAAACACCCCCACACCCCCACCCCCCCACATCCCACACCCCACACTCCTCAAACCTCCACACCCCACACCCCCACATCCCACACCCCACACTCCTCAAACCTCCACACCCCACACCCCACACTCTGCACCCCTCAAACCCCCACACCTCT 4 . ID=chr18-78563825-INS-184;SVTYPE=INS;SVLEN=184;TIG_REGION=h1tg002297l:103329-103512;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=578.0 GT:DR:DV:GQ:SUPP 0/1:2:2:14:3 +chr18 78563824 chr18-78563825-INS-184 C CTCAAACCCCCACACCCCCACACCCCCACACCCCTCAAACACCCCCACACCCCCACCCCCCCACATCCCACACCCCACACTCCTCAAACCTCCACACCCCACACCCCCACATCCCACACCCCACACTCCTCAAACCTCCACACCCCACACCCCACACTCTGCACCCCTCAAACCCCCACACCTCT 4 . ID=chr18-78563825-INS-184;SVTYPE=INS;SVLEN=184;TIG_REGION=h1tg002297l:103329-103512;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=578.0 GT:DR:DV:GQ:SUPP 1/0:2:2:14:3 chr18 78563984 chr18-78563985-INS-68 C CCCCACACCCCCACATCCCACACCCACACTCCTCAAACCTCCACACCCCACACCCATCAAACCCCCACA 4 . ID=chr18-78563985-INS-68;SVTYPE=INS;SVLEN=68;TIG_REGION=h1tg002297l:103694-103761;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;AC=1 GT:SUPP 1/0:1 chr18 78564342 pbsv.DEL.1362 GCAGGGGGAGAACCCAGCCCTTCTCTTCCTCCTCTCCCTAAGC G 2 PASS SVTYPE=DEL;SVLEN=-42;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,1:4:2,1,0,1:4 chr18 78578700 chr18-78578701-INS-97;pbsv.INS.1363 C CGTAACATCTAACATCTACCTGTTTAACGTCTAAGGGTTTAACATCTAAGAGTCTAACATCTGATGGTCTAATGAATGGTCTAACGTCTGATGGTCTA 4 PASS ID=chr18-78578701-INS-97;SVTYPE=INS;SVLEN=97;TIG_REGION=h2tg023785l:2817-2913;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 0/1:6,1:7:4,2,1,0:5 @@ -1790,12 +1790,12 @@ chr18 78584619 chr18-78584620-DEL-71 AGCCTCCTCTCTGAGCCTCCCTTTCGCCTCGTGTGCTGAGCAG chr18 78606277 pbsv.DEL.1366 CATACAAACACACACCCCACACACACTACACACACACATCACACACACACCCCCACACCCCACACACACCCGCACA C 2 PASS SVTYPE=DEL;SVLEN=-75;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,1:8:3,4,0,1:4 chr18 78606787 pbsv.INS.1367 C CACACACCACACCACCCCACACTACAAC 2 PASS IMPRECISE;SVTYPE=INS;SVLEN=27;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,5:8:1,2,2,3:4 chr18 78613799 Sniffles2.DEL.399S11 ACACTCCCTCACTGGGTGTAGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTGTAGGTGGGATACACTCCCTCACTGGGTGTAGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACA A 0 PASS IMPRECISE;SVTYPE=DEL;SVLEN=-448;SUPPORT=3;COVERAGE=7,7,7,7,8;STRAND=+-;AF=0.429;STDEV_LEN=48.789;STDEV_POS=70.437;AC=1 GT:GQ:DR:DV:SUPP 0/1:18:4:3:2 -chr18 78613884 chr18-78613885-DEL-672 CACTCCCTCACTGGGTGTAGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTGTGGGTGGGATATACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACAATCCTTCACTGGGTGTGGGTGGGATATACTCCCTCACTGGATGTGGGTGGGATGT C 4 . ID=chr18-78613885-DEL-672;SVTYPE=DEL;SVLEN=-672;TIG_REGION=h1tg002297l:153664-153664;QUERY_STRAND=+;HOM_REF=0,17;HOM_TIG=0,17;AC=1;NumCollapsed=3;NumConsolidated=3;CollapseId=583.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,7:7:3:4:18:0,0,2,5:7 +chr18 78613884 chr18-78613885-DEL-672 CACTCCCTCACTGGGTGTAGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTATGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTATGGGTGGGATACACTCCCTCACTGGGTGTGGGTGGGATATACTCCCTCACTGGGTGTGGGTGGGACACACTCCCTCACTGGGTGTGGGTGGGACACAATCCTTCACTGGGTGTGGGTGGGATATACTCCCTCACTGGATGTGGGTGGGATGT C 4 . ID=chr18-78613885-DEL-672;SVTYPE=DEL;SVLEN=-672;TIG_REGION=h1tg002297l:153664-153664;QUERY_STRAND=+;HOM_REF=0,17;HOM_TIG=0,17;AC=1;NumCollapsed=3;NumConsolidated=3;CollapseId=583.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,7:7:3:4:18:0,0,2,5:7 chr18 78614490 Sniffles2.DEL.39AS11 GGGTGGGACACAATCCTTCACTGGGTGTGGGTGGGATATACTCCCTCACTGGATGTGGGTGGGATGTACTCCCTCACTGGGTGTG G 0 PASS IMPRECISE;SVTYPE=DEL;SVLEN=-84;SUPPORT=3;COVERAGE=7,7,7,7,8;STRAND=+-;AF=0.429;STDEV_LEN=31.754;STDEV_POS=38.197;AC=1 GT:GQ:DR:DV:SUPP 0/1:18:4:3:2 chr18 78632874 pbsv.DEL.1370 TCTACATGTATACAGGAAGCAATGTGAGTTACTGTTACAGCCTTAGTCCTACGTGTATACAGGAAGCAATGTGAGTTACTGTTACAGCCTTAGTCCTATGTGTATACAGGAAGCAATGTGAGTTACTGTTGCAGCCTTAGTCCTACCTGTATACAGGAAGCAATGTGAGTTACTGTCCTAGCCTTAGTC T 2 PASS SVTYPE=DEL;SVLEN=-188;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,3:10:2,5,3,0:4 chr18 78632880 Sniffles2.DEL.39CS11 TGTATACAGGAAGCAATGTGAGTTACTGTTACAGCCTTAGTCCTACGTGTATACAGGAAGCAATGTGAGTTACTGTTACAGCCTTAGTCCTATGT T 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-94;SUPPORT=3;COVERAGE=8,8,8,8,10;STRAND=+;AF=0.375;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:16:5:3:2 chr18 78638447 pbsv.DEL.1371 CACCACACAGCACACACCAGACACCACACAG C 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,3,4:4 -chr18 78645365 chr18-78645366-INS-106;pbsv.INS.1372 A AGGCGGCGAGACCACACGTCCACACCAGGCCCAGACCTCAGCGCCTCGGGGGCGGGCGGCGAGACCACACGTCCACACCAGGCCCAGACCTCAGCGCCTCGGGGGCG 4 PASS ID=chr18-78645366-INS-106;SVTYPE=INS;SVLEN=106;TIG_REGION=h1tg002297l:184446-184551;QUERY_STRAND=+;HOM_REF=0,105;HOM_TIG=0,105;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=585.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:9:25:7 +chr18 78645365 chr18-78645366-INS-106;pbsv.INS.1372 A AGGCGGCGAGACCACACGTCCACACCAGGCCCAGACCTCAGCGCCTCGGGGGCGGGCGGCGAGACCACACGTCCACACCAGGCCCAGACCTCAGCGCCTCGGGGGCG 4 PASS ID=chr18-78645366-INS-106;SVTYPE=INS;SVLEN=106;TIG_REGION=h1tg002297l:184446-184551;QUERY_STRAND=+;HOM_REF=0,105;HOM_TIG=0,105;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=585.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:9:25:7 chr18 78651488 chr18-78651489-INS-57 T TGGGGGCACCTGTGTGCACAACCCTGAGGACGGGACTGCAGGGCCAGAGGGCGCGTGC 4 . ID=chr18-78651489-INS-57;SVTYPE=INS;SVLEN=57;TIG_REGION=h1tg002297l:190687-190743,h2tg015095l:58059-58115;QUERY_STRAND=+,-;HOM_REF=0,30;HOM_TIG=0,49;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=586.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:1,6:7:.:6:16:1,0,2,4:7 chr18 78653253 chr18-78653254-DEL-221 CAGGGAACACCCTCAGTCAGGAAACCCCTCAGTCCCAAGAGACCCCTCAGTCCCGGAAACCCCTCAGCCCCGGGAACCCCCCAGTCCCTGGAGCCCCTCAGTCCCGGGAAACCCCTCAGTCCCGGGAACCCCTTCGATCCCGGGAACCCCTCAGTCAGGAAACCCCTCAGTCCCGGGAACCCCTCAGTCCTGGAAACCCCTCAGTCCCGGGAACCCCTCAGT C 4 . ID=chr18-78653254-DEL-221;SVTYPE=DEL;SVLEN=-221;TIG_REGION=h1tg002297l:192518-192518,h2tg015095l:56284-56284;QUERY_STRAND=+,-;HOM_REF=0,0;HOM_TIG=0,0;AC=2 GT:SUPP 1/1:1 chr18 78653648 pbsv.DEL.1374 CAGGAAACCCCTCAGTCCCGGGAACCCCTGAGTCCCAAGAGACCCCTCAGTCCCGGAAACCCCTCAGTCCCAGGAACCCCTTCAGTCCCAGGAACCCCCTCGGTCCCGGGAACCCCCTCAGTCAGGAAACCCCTCAGTCCAGGGAACCCCCTCAGTCAGGAAACCCCTCAGTCCCAAGAGACCCCCTCAGTCCCGGAAACCCCTCAGCCCCGGGAACCCCCCAGTCCCTGGAGCCCCTCAGTCCCGGGAAACCCCTCAGTCCCGGGAACCCCTTCGATCCCGGGAACCCCTCAGTCAGGAAACCTCTCAGCCCCGGGAACCCCCTCAGTCCCGGGAAACCCCTCAGTCCCAGGAACCCCTCAGTCCCAGGAAACCCCTCAGTCCCGGGAACCCCTCAGTCCCGGGAACCCTTCAGTCCCAGGAACCCCTCGGTCTCAGGAACCCCCTCGGTCCCGGGAACCCCTCAGTCCCGGAAACCCCTCAGTCCCGGGAACCCCTTCGGTCCCGGGAATCCCCTCGTTCCCGGGAACCCCTCAG C 2 PASS SVTYPE=DEL;SVLEN=-536;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:2,3,0,1:4 @@ -1820,7 +1820,7 @@ chr18 78835104 chr18-78835105-INS-58;pbsv.INS.1385 C CACATTCATACACGACACTAGACATAG chr18 78851612 pbsv.DEL.1386 GCTATGGAATGTAAAATGGTTCACCCA G 2 PASS SVTYPE=DEL;SVLEN=-26;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,4,5:4 chr18 78854914 pbsv.INS.1387 A AAGTGCTAACTAACCAGTGTGCTTAATCCCCCATCGTCACCCACTGGGGAGGG 2 PASS SVTYPE=INS;SVLEN=52;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:3,5,1,0:4 chr18 78866486 pbsv.DEL.1388 GCTGGCTAGAGGGAGGGTGACAGCCGCGGCCGAACCTGCAGTGCTGGCTAGAGGGAGGGTGACAGCCGCGGCCGAACCTGCAGTGCTGGCTAGAGGGAGGGTGACAGCCGCGGACAAACCTGCAGAC G 2 PASS SVTYPE=DEL;SVLEN=-126;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=595.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:6 -chr18 78866528 chr18-78866529-DEL-84 GCTGGCTAGAGGGAGGGTGACAGCCGCGGCCGAACCTGCAGTGCTGGCTAGAGGGAGGGTGACAGCCGCGGACAAACCTGCAGAC G 4 . ID=chr18-78866529-DEL-84;SVTYPE=DEL;SVLEN=-84;TIG_REGION=h1tg002297l:407112-407112;QUERY_STRAND=+;HOM_REF=0,70;HOM_TIG=0,70;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=595.0 GT:AD:DP:SAC:SUPP 0/1:4,1:5:1,3,1,0:5 +chr18 78866528 chr18-78866529-DEL-84 GCTGGCTAGAGGGAGGGTGACAGCCGCGGCCGAACCTGCAGTGCTGGCTAGAGGGAGGGTGACAGCCGCGGACAAACCTGCAGAC G 4 . ID=chr18-78866529-DEL-84;SVTYPE=DEL;SVLEN=-84;TIG_REGION=h1tg002297l:407112-407112;QUERY_STRAND=+;HOM_REF=0,70;HOM_TIG=0,70;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=595.0 GT:AD:DP:SAC:SUPP 1/0:4,1:5:1,3,1,0:5 chr18 78936644 pbsv.DEL.1390 AGGGGGCACAGCCCAGGAAGGCTGAGGGCCAGGGAGGTGGGCGGGGC A 2 PASS SVTYPE=DEL;SVLEN=-46;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,9:10:1,0,5,4:4 chr18 78942255 pbsv.DEL.1391 ACCCCAACCACAGCCTGCAAACCTGAGCTTGGGGATAGCGGAGAATCAG A 2 PASS SVTYPE=DEL;SVLEN=-48;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 chr18 78965174 chr18-78965175-INS-123 G GTCGGTGGCACCCAGGCTGCCCCTCCACCCGGCCTGCACCAGCGCCGCCTTCTCCGGAGCCGTCGGTGGGACCCAGGCTGCCCCTCCACCCGGCCTGCGCCAGCGCCGCCTTCTCTGGGAGCCA 4 . ID=chr18-78965175-INS-123;SVTYPE=INS;SVLEN=123;TIG_REGION=h1tg002297l:505639-505761,h2tg020617l:1408-1530;QUERY_STRAND=+,+;HOM_REF=0,7;HOM_TIG=0,42;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=596.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,5:5:.:5:13:0,0,4,1:7 @@ -1856,12 +1856,12 @@ chr18 79036315 chr18-79036316-INS-296 G GACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCA chr18 79036462 chr18-79036463-INS-889 C CGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCAAGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCAAGGCTGCCATGTCTCAGAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCAAGGCTGCCATATCTCAGAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCATGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCAGAGCCTTCCATGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCATGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCAT 4 . ID=chr18-79036463-INS-889;SVTYPE=INS;SVLEN=889;TIG_REGION=h1tg002297l:577310-578198;QUERY_STRAND=+;HOM_REF=0,73;HOM_TIG=0,73;AC=1 GT:SUPP 1/0:1 chr18 79036600 chr18-79036601-INS-222 G GAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCATAGCCTTCCACGACTCTCACCCTCCACCCAGGCATCCTGGTTCTAGATTCAGTCCTCATGGCTGCCATGTCTCAG 4 . ID=chr18-79036601-INS-222;SVTYPE=INS;SVLEN=222;TIG_REGION=h2tg020617l:84168-84389;QUERY_STRAND=+;HOM_REF=6,60;HOM_TIG=0,221;AC=1 GT:SUPP 0/1:1 chr18 79039221 chr18-79039222-INS-56 A ATGGATGGTATGGTATGCTAAGGTTCTCATGGATGGTACTCTACGCTAAGGTTCTCG 4 . ID=chr18-79039222-INS-56;SVTYPE=INS;SVLEN=56;TIG_REGION=h2tg020617l:87011-87066;QUERY_STRAND=+;HOM_REF=0,5;HOM_TIG=0,9;AC=1 GT:SUPP 0/1:1 -chr18 79039281 chr18-79039282-INS-1343 A ATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCAGATGGTATTTTATGCTAAGGTTCTCAGATGGTATTTTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACAGTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCATGGATGGTACTTTCTCGTGGATAGTACTATACTGCTAAGGTTCTTGCGGTTGGTACTCTATGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTCGTGGATGGTACTCTGTGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTTGTGGATGTACTCTATGCTAAGGTTCTCGTGGATGGTACTTTCTCATGAATAGTACTGTACTACTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTTTCTCATGAATAGTACTGTACTACTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACTTTCTCATGGATAGTACTATACTGCTAAGGTTCTCGTGGCTGGTACTGCATGCTAAGGTTCTCGTGGATGGTACTTTCTCGTGGATAGTACTATACTGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCAAATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACAGTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCATGGATGGTACTTTCTCATGGATAGTACTATACTGCTAATGTTCTTGCGGTTGGTACTCTATGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTCGCGGATGGTACTCTGTGCTAAGGTTCTCGCGGATGGTACCGTATGCTAAGGGTCTCGCGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTTTCTCATGAATAGTACTGTACTACTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGG 4 . ID=chr18-79039282-INS-1343;SVTYPE=INS;SVLEN=1343;TIG_REGION=h1tg002297l:581018-582360;QUERY_STRAND=+;HOM_REF=0,7;HOM_TIG=0,7;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=602.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,2:6:2:2:14:0,4,0,2:7 +chr18 79039281 chr18-79039282-INS-1343 A ATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCAGATGGTATTTTATGCTAAGGTTCTCAGATGGTATTTTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACAGTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTGAGGTTCTCATGGATGGTACTTTCTCGTGGATAGTACTATACTGCTAAGGTTCTTGCGGTTGGTACTCTATGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTCGTGGATGGTACTCTGTGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTTGTGGATGTACTCTATGCTAAGGTTCTCGTGGATGGTACTTTCTCATGAATAGTACTGTACTACTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTTTCTCATGAATAGTACTGTACTACTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACTTTCTCATGGATAGTACTATACTGCTAAGGTTCTCGTGGCTGGTACTGCATGCTAAGGTTCTCGTGGATGGTACTTTCTCGTGGATAGTACTATACTGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCAAATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGATGGTACAGTATGCTAAGGTTCTCGTGGATGGTACTCTATGCTAAGGTTCTCATGGATGGTACTTTCTCATGGATAGTACTATACTGCTAATGTTCTTGCGGTTGGTACTCTATGCTAAGGTTCTCACGGATGGTACTCTGTGCTAAGGTTCTCGCGGATGGTACTCTGTGCTAAGGTTCTCGCGGATGGTACCGTATGCTAAGGGTCTCGCGGATGGTACTCTATGCTAAGGTTCTCGTGGATGGTACTTTCTCATGAATAGTACTGTACTACTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTTGTGGG 4 . ID=chr18-79039282-INS-1343;SVTYPE=INS;SVLEN=1343;TIG_REGION=h1tg002297l:581018-582360;QUERY_STRAND=+;HOM_REF=0,7;HOM_TIG=0,7;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=602.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:4,2:6:2:2:14:0,4,0,2:7 chr18 79039363 Sniffles2.INS.1DDS11 T CTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCAGATGGTATTTTATGCTAAGGTTCTCAGATGGTATTTTATGCTAAGGTTCTCAGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTTTATGCTAAGGTTCTCATGGATGGTACTCTATGCTAAGG 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=199;SUPPORT=2;COVERAGE=6,4,4,4,2;STRAND=-;AF=0.5;STDEV_LEN=41.719;STDEV_POS=111.016;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:2:2:2 chr18 79043509 pbsv.INS.1401 A AACCCTCACCCCAACCCCCACCCCAACCCTCACCCCATCCCCCATCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCTTCACCCCATCCCCCATCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCATCCCCCATCCCATCCCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCCTCACCCCATCCCCCATCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCATCCCCATCCATCCCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCCCACCCCAACCCCCACCCCAACCCTCACCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCATCCCCCACTCACATCCCCCACCCCAACCCCCACCCAACCCCCACCCCAACCCCCACCCCAACCCTCACCGCATCCTCCACCCCAACCCCCACCCCATCCCCCACCCACATCCCCCACCCCAACCCCCACCCAACCCCCACCCCAACCCCCACCCCAACCCTCACCCCATCCCCCATCCCCC 2 PASS SVTYPE=INS;SVLEN=669;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,0,1:4 chr18 79071399 pbsv.INS.1402 C CTTTTTTTTTTTTTTTTTTTTTTT 2 PASS SVTYPE=INS;SVLEN=23;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,3:5:1,1,2,1:4 chr18 79172193 chr18-79172194-DEL-62 CTAGCCACCGTGCCCCGCCCTTGCGATCCGCCTTGGCCTCCCAAGGTGCTGTGATTACAGGCG C 4 . ID=chr18-79172194-DEL-62;SVTYPE=DEL;SVLEN=-62;TIG_REGION=h2tg018179l:129280-129280;QUERY_STRAND=+;HOM_REF=0,207;HOM_TIG=0,201;AC=1 GT:SUPP 0/1:1 -chr18 79172521 chr18-79172522-DEL-62;pbsv.DEL.1403 CCCTTGCGATCCGCCTTGGCCTCCCAAGGTGCTGTGATTACAGGCGTAGCCACCGTGCGCCGA C 4 PASS ID=chr18-79172522-DEL-62;SVTYPE=DEL;SVLEN=-62;TIG_REGION=h1tg017503l:18008-18008;QUERY_STRAND=-;HOM_REF=0,57;HOM_TIG=0,57;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=604.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:11:30:7 +chr18 79172521 chr18-79172522-DEL-62;pbsv.DEL.1403 CCCTTGCGATCCGCCTTGGCCTCCCAAGGTGCTGTGATTACAGGCGTAGCCACCGTGCGCCGA C 4 PASS ID=chr18-79172522-DEL-62;SVTYPE=DEL;SVLEN=-62;TIG_REGION=h1tg017503l:18008-18008;QUERY_STRAND=-;HOM_REF=0,57;HOM_TIG=0,57;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=604.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:11:30:7 chr18 79200703 pbsv.INS.1404 T TGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTAGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTAGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACGTTGGGGTCAGAGCAGAGGCGGAGGTGGGAACGTTGGGGTCAGAGCAGAGGCGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGGACTGTCGGG 2 PASS SVTYPE=INS;SVLEN=526;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,1:2:0,1,0,1:4 chr18 79200734 pbsv.INS.1405 G GGGGTCAGAGCAGAGGCGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCAGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGGACTGTCAGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCAGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGAACTGTCGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGCGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACGTTGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGGACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACGTTGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACGTTGGGGTCAGAGCAGAGGTGGAGGTGGGAACGTTGGGGTCAGAGCAGAGGTGGAGGTGGGAACGTTGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTCGGGGTCAGAGCAGAGGTGGAGGTGGGAACTGTC 2 PASS SVTYPE=INS;SVLEN=1940;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,1:2:0,1,0,1:4 chr18 79245593 pbsv.DEL.1406 ATGACTGTGCGGAGGGTACCACCCTACTGACTGGGGAGGGTACCGCCCTACTGACTGAGGAGGGTACCGCCCTAGTGACTGTGCGGAGGGCACCGCCCTAC A 2 PASS SVTYPE=DEL;SVLEN=-100;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,9:10:0,1,3,6:4 @@ -1893,12 +1893,12 @@ chr18 79374357 pbsv.DEL.1419 GAGCCCCGTCGGTCACTGGCTGGCCGGTCCCCTGACAGGAGGCGCTA G 2 chr18 79376199 pbsv.INS.DUP.1420 A ACACACACACACACACAAA 0 PASS SVTYPE=INS;SVLEN=18;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,2,4:4 chr18 79385401 chr18-79385402-INS-55;pbsv.INS.1421 C CAGGCCACACCGCCGGGGCCAGGCCACACCGCCGGGGCCAGGCCACACCACCACGG 4 PASS ID=chr18-79385402-INS-55;SVTYPE=INS;SVLEN=55;TIG_REGION=h1tg015243l:95178-95232,h2tg021222l:51208-51262;QUERY_STRAND=-,+;HOM_REF=0,0;HOM_TIG=0,0;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=613.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:9:15:7 chr18 79388797 pbsv.DEL.1422 AGGGAAAGAGAGGAAGAGATCTCTATCAATGTGGTCG A 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,10:10:0,0,4,6:4 -chr18 79400832 chr18-79400833-INS-172;pbsv.INS.1423 A ACCCCTCCCCCGACCTCCCCCCCGCGCCCCGACCTCCTCCCTGTTCCCTCCCCCGACCTCCCCCTTCCCCCCCGACCTACACCCCGCCCCCCTACCTCCCCCCTCCCCGTGACCTGCCCCCCAGAACTCCTCCCCATCCCGCCCCCCGACCTCCCCCCGCCCCCCTCCCCCGG 4 PASS ID=chr18-79400833-INS-172;SVTYPE=INS;SVLEN=172;TIG_REGION=h1tg015243l:79619-79790;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=614.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:6:16:7 -chr18 79408992 chr18-79408993-DEL-200;pbsv.DEL.1424 ATTCCTCCATTCCCTATCCATCCGTCCATCCATCATCCATCCATCATCATCCATCCATTATTCCTCCATTCCCTATCCATTCATTCATCATCCATCCATCCATCATCATCCATCCATCCATCAAACCATTATTCCTCCATTCCCTATCCATCCATCCGTCATCCATCTATCCATCATCATCCATCCATCATCAAACCATTG A 4 PASS ID=chr18-79408993-DEL-200;SVTYPE=DEL;SVLEN=-200;TIG_REGION=h1tg015243l:71460-71460;QUERY_STRAND=-;HOM_REF=0,22;HOM_TIG=0,22;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=615.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:7:19:7 +chr18 79400832 chr18-79400833-INS-172;pbsv.INS.1423 A ACCCCTCCCCCGACCTCCCCCCCGCGCCCCGACCTCCTCCCTGTTCCCTCCCCCGACCTCCCCCTTCCCCCCCGACCTACACCCCGCCCCCCTACCTCCCCCCTCCCCGTGACCTGCCCCCCAGAACTCCTCCCCATCCCGCCCCCCGACCTCCCCCCGCCCCCCTCCCCCGG 4 PASS ID=chr18-79400833-INS-172;SVTYPE=INS;SVLEN=172;TIG_REGION=h1tg015243l:79619-79790;QUERY_STRAND=-;HOM_REF=0,4;HOM_TIG=0,4;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=614.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:6:16:7 +chr18 79408992 chr18-79408993-DEL-200;pbsv.DEL.1424 ATTCCTCCATTCCCTATCCATCCGTCCATCCATCATCCATCCATCATCATCCATCCATTATTCCTCCATTCCCTATCCATTCATTCATCATCCATCCATCCATCATCATCCATCCATCCATCAAACCATTATTCCTCCATTCCCTATCCATCCATCCGTCATCCATCTATCCATCATCATCCATCCATCATCAAACCATTG A 4 PASS ID=chr18-79408993-DEL-200;SVTYPE=DEL;SVLEN=-200;TIG_REGION=h1tg015243l:71460-71460;QUERY_STRAND=-;HOM_REF=0,22;HOM_TIG=0,22;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=615.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:7:19:7 chr18 79427856 pbsv.INS.1425 A AGGGGGAGCTGGACGGCTGGCCTCTGTGCGGTGGGTGTC 2 PASS SVTYPE=INS;SVLEN=38;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,5:6:1,0,4,1:4 chr18 79455746 pbsv.DEL.1426 TCACGGCCGCCCCATCCCACGGCCGCCCCATCC T 2 PASS SVTYPE=DEL;SVLEN=-32;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:7,2:9:5,2,1,1:4 chr18 79483083 pbsv.DEL.1427 ACTGGGGTGTAATTCCAGCGTGACCTGGTTC A 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,4:8:2,2,1,3:4 -chr18 79494279 chr18-79494280-INS-384;pbsv.INS.1428 C CGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATCAACCTGGTACCGCCGGGGGAAGGCGAGAACGGGCACACGCCCCCCATCAACCTGGTACCGCCGGGGGAAGGCGAGAACGGGCACACGCCCCCCATCAACCTGGTGCGGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATGAACCTGGTACCGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATCGACCTGGTGCGGCCGGGGGAAGGCGAGAGGGGGCACACGCCCCCCATGAACCTGGTACCGCTGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATGAACCTGGTACGGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATGAACCTGGTGCG 4 PASS ID=chr18-79494280-INS-384;SVTYPE=INS;SVLEN=384;TIG_REGION=h1tg008520l:13939-14322;QUERY_STRAND=-;HOM_REF=0,36;HOM_TIG=0,36;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=616.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:6:6:7 +chr18 79494279 chr18-79494280-INS-384;pbsv.INS.1428 C CGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATCAACCTGGTACCGCCGGGGGAAGGCGAGAACGGGCACACGCCCCCCATCAACCTGGTACCGCCGGGGGAAGGCGAGAACGGGCACACGCCCCCCATCAACCTGGTGCGGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATGAACCTGGTACCGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATCGACCTGGTGCGGCCGGGGGAAGGCGAGAGGGGGCACACGCCCCCCATGAACCTGGTACCGCTGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATGAACCTGGTACGGCCGGGGGAAGGCGAGAGCGGGCACACGCCCCCCATGAACCTGGTGCG 4 PASS ID=chr18-79494280-INS-384;SVTYPE=INS;SVLEN=384;TIG_REGION=h1tg008520l:13939-14322;QUERY_STRAND=-;HOM_REF=0,36;HOM_TIG=0,36;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=616.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:1:6:6:7 chr18 79498663 chr18-79498664-INS-68 A ATCCAAATGGTTCACAAAATTCAAATGGGATAAATTAAAAGCAGCTCACACACAGACATAAACCAAACT 4 . ID=chr18-79498664-INS-68;SVTYPE=INS;SVLEN=68;TIG_REGION=h1tg008520l:9485-9552;QUERY_STRAND=-;HOM_REF=0,68;HOM_TIG=0,68;AC=1 GT:SUPP 1/0:1 chr18 79500794 chr18-79500795-DEL-65 GGAAGAAACAGAAAAGTATAATAGACCTATAGCAGGGAAATAAAAGAAATTAATAATTTAACATAT G 4 . ID=chr18-79500795-DEL-65;SVTYPE=DEL;SVLEN=-65;TIG_REGION=h1tg008520l:7349-7349;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 chr18 79504859 Sniffles2.INS.1F0S11 G GGTGAGGGAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGGTGCTGGAGGCCCTTGGGTGAGGAAGAGGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGCTGGAGGCCCTT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=114;SUPPORT=6;COVERAGE=8,8,8,8,8;STRAND=+-;AF=0.75;STDEV_LEN=1.633;STDEV_POS=43.7;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:3:2:6:2 @@ -1906,25 +1906,25 @@ chr18 79505479 pbsv.INS.1429 G GCCCTTGGGTGATGGAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGG chr18 79505543 Sniffles2.INS.1F4S11 G GGTGAGGGAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGGTGCTGGAGGCCCTTGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGCTGGAGGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGCGTGGAGGAGGTGGTGCTGGAGGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGGATGAGACCCTTGGGTGATGAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGTGGACGAGACCCTTGGGTGATGGAAGAGGCAGAGACTGCTGTGTGGGAGGAGGTGGTGCTGGAGGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGGTGCTGGAGGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGGATGAGACCCTTGGGTGAGGGAAGA 3 PASS PRECISE;SVTYPE=INS;SVLEN=450;SUPPORT=4;COVERAGE=8,8,8,8,7;STRAND=+-;AF=0.5;STDEV_LEN=4.243;STDEV_POS=20.506;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:28:4:4:2 chr18 79505556 Sniffles2.INS.1F3S11 G GCAGGAGACTGCTGCGTGGGAGGAGTGGTGCTGGAGGCCCTTGGGTGAGGGAAGAGGCAGAGACTGCTGTGTGGGAGGAGGTGGTGGATGAGACCCCTTGGGTGATGGAAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGGTGACGAGACCCTTGGGTGATGGAAGAGGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGCTGGAGGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGGTGCTGGCGGCCCTTGGGTGAGGGAAGA 3 GT IMPRECISE;SVTYPE=INS;SVLEN=285;SUPPORT=2;COVERAGE=8,8,8,8,7;STRAND=+-;AF=0.25;STDEV_LEN=1.414;STDEV_POS=29.698;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:3:6:2:2 chr18 79505706 Sniffles2.INS.1F2S11 G GGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGCGTGGGAGGAGGTGGTGCTGGAGGCCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGGATGAGACCCTTGGGTGAGGGAAGAGGCAGGAGACTGCTGTGTGGGAGGAGGTGGTGCTGG 3 GT IMPRECISE;SVTYPE=INS;SVLEN=172;SUPPORT=2;COVERAGE=8,8,8,7,7;STRAND=+-;AF=0.25;STDEV_LEN=1.414;STDEV_POS=26.163;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:3:6:2:2 -chr18 79521802 chr18-79521803-INS-78 T TGGGGGGGGCATCCACTGATGTGTGTGTCTGTGTGTGTGGGGGGAGCATCCGCTGATGTGTATGTCTGTGTGTGGGGGG 4 . ID=chr18-79521803-INS-78;SVTYPE=INS;SVLEN=78;TIG_REGION=h1tg013228l:20726-20803;QUERY_STRAND=+;HOM_REF=0,8;HOM_TIG=0,8;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=621.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,2:2:.:3:8:0,0,2,0:7 +chr18 79521802 chr18-79521803-INS-78 T TGGGGGGGGCATCCACTGATGTGTGTGTCTGTGTGTGTGGGGGGAGCATCCGCTGATGTGTATGTCTGTGTGTGGGGGG 4 . ID=chr18-79521803-INS-78;SVTYPE=INS;SVLEN=78;TIG_REGION=h1tg013228l:20726-20803;QUERY_STRAND=+;HOM_REF=0,8;HOM_TIG=0,8;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=621.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,2:2:.:3:8:0,0,2,0:7 chr18 79525220 chr18-79525221-DEL-66 CCTCAGTCCTCCCCACGTCCCACCGTCGTTACCCCTCAGTCCTCCCCACGTCCCACCGTCGTTACCT C 4 . ID=chr18-79525221-DEL-66;SVTYPE=DEL;SVLEN=-66;TIG_REGION=h1tg013228l:24191-24191;QUERY_STRAND=+;HOM_REF=0,65;HOM_TIG=0,65;AC=1 GT:SUPP 1/0:1 chr18 79525259 pbsv.DEL.1431 TCCTCCCCACGTCCCACCGTCGTTACCTCTCAGTCCTCCCCACGTCCCACCGTCGTTACCCCTCAGTCCTCCCCACGTCCCACCGTCGTTACCCCTCAGG T 2 PASS SVTYPE=DEL;SVLEN=-99;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=622.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:6 chr18 79532074 pbsv.INS.1432 T TACCCTGTGCCCGCCTGCAGCCCCTCCAGCCAACCCCC 2 PASS SVTYPE=INS;SVLEN=37;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,2,2:4 -chr18 79532348 chr18-79532349-INS-80;pbsv.INS.1433 C CCGGCAGACCCTCCTGTCTCCGCCTGCAGTCCCCCGCCCCCCGGCAGACCCTCCTGTCTCCGCCTGCAGTCCCCCGCCCCT 4 PASS ID=chr18-79532349-INS-80;SVTYPE=INS;SVLEN=80;TIG_REGION=h1tg013228l:31290-31369;QUERY_STRAND=+;HOM_REF=0,28;HOM_TIG=0,28;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,2,2:5 +chr18 79532348 chr18-79532349-INS-80;pbsv.INS.1433 C CCGGCAGACCCTCCTGTCTCCGCCTGCAGTCCCCCGCCCCCCGGCAGACCCTCCTGTCTCCGCCTGCAGTCCCCCGCCCCT 4 PASS ID=chr18-79532349-INS-80;SVTYPE=INS;SVLEN=80;TIG_REGION=h1tg013228l:31290-31369;QUERY_STRAND=+;HOM_REF=0,28;HOM_TIG=0,28;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/0:0,4:4:0,0,2,2:5 chr18 79532349 Sniffles2.INS.1F6S11 C CGGCAGACCCTCCTGTCTCCGCCTGCAGTCCCCCGCCCCCCGGCAGACCCTCCTGTCTCCGCCTGCAGTCCCCCGCCCCT 3 PASS PRECISE;SVTYPE=INS;SVLEN=121;SUPPORT=4;COVERAGE=4,4,4,4,4;STRAND=+-;AF=1;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=2 GT:GQ:DR:DV:SUPP 1/1:11:0:4:2 chr18 79546296 chr18-79546297-INS-140 T TCACTCAGCCTTCCACTCACCTCTCCAATCACCCTCTCCACACTCACCTCTCCAGCTCACCCTCTCCACATTCACCCTCTCCACGCTCACCCTCTCCACACTGAGCCTCTCCACATTCACCCTCTCCACATTCACCCTCTC 4 . ID=chr18-79546297-INS-140;SVTYPE=INS;SVLEN=140;TIG_REGION=h1tg026073l:2821-2960;QUERY_STRAND=+;HOM_REF=0,3;HOM_TIG=0,3;AC=1 GT:SUPP 1/0:1 chr18 79546296 pbsv.INS.1434 T TCACTCAGCCTTCCACTCACCTCTCCAATCACCCTCTCCACACTCACCTCTCCAGCTCACCCTCTCCACATTCACCCTCTCCACGCTCACCCTCTCCACACTGAGCCTCTCCACATTCACCCTCTCCACATTCACCCTCTCCACACTCAGCCTCTCCACACTCACCCTCTCCACATTCACCTCTC 2 PASS SVTYPE=INS;SVLEN=184;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,1:1:0,0,0,1:4 -chr18 79549941 chr18-79549942-DEL-2140 CCAGACAGGGCCGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCCGTGTGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGATGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGTGGTGCGGATGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCGGTGCGGATGGCAGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGATGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCGGTGCGGATGGCAGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGATGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGTGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCGGTGCGGATGGCAGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCGGTGCGGACGGCAGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCCGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGATGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGATGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGATGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCCGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCCGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGATGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCA C 4 . ID=chr18-79549942-DEL-2140;SVTYPE=DEL;SVLEN=-2140;TIG_REGION=h1tg026073l:6643-6643;QUERY_STRAND=+;HOM_REF=0,10;HOM_TIG=0,9;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=625.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:1,2:3:.:2:5:1,0,1,1:7 +chr18 79549941 chr18-79549942-DEL-2140 CCAGACAGGGCCGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCCGTGTGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGATGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGTGGTGCGGATGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCGGTGCGGATGGCAGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGATGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCGGTGCGGATGGCAGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGATGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGTGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCGGTGCGGATGGCAGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCATAGACCGACAGGGCGGTGCGGACGGCAGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCCGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGATGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGATGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGATGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCCGTGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCACAGACAGGGCCGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGGTGCGGACGGCGGGAAGGCAGGTGACAAAGCCTCACAGACCCACAGACAGGGCGATGCGGACGGCGGGAAGGCAGGCGACAAAGCCTCACAGACCCA C 4 . ID=chr18-79549942-DEL-2140;SVTYPE=DEL;SVLEN=-2140;TIG_REGION=h1tg026073l:6643-6643;QUERY_STRAND=+;HOM_REF=0,10;HOM_TIG=0,9;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=625.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:1,2:3:.:2:5:1,0,1,1:7 chr18 79556313 pbsv.INS.1436 A ACCCCCCCGGGAGAAGCCCCCTCCAGGAGA 2 PASS SVTYPE=INS;SVLEN=29;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:3,0,1,3:4 chr18 79556529 pbsv.INS.1437 C CCGGGAGAAGCCCCCTCCAGGAGAACCCCCCTGGGAGACTCCCCCCCAGGAGACCCCCCCCGGGAGACTCCCCCCCCAGGAGACCCCCCCTCCAGGAGAACCCTCCCAGGAGACTCCCCCCCAGGAGAACCCTCC 2 PASS SVTYPE=INS;SVLEN=134;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:1,3,3,0:4 chr18 79556672 Sniffles2.INS.1F8S11 C CCCCCCCAGGAGAAACCCCCCCCTCCAGGAGAACCCTCCCAGGAGACTCCCCCCCAGGAGAACCCTCCCAGGAGACTCCCCCCAGGAGATCCCTCCCAGAGACTC 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=105;SUPPORT=3;COVERAGE=6,7,7,7,7;STRAND=+;AF=0.429;STDEV_LEN=0.577;STDEV_POS=52.83;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:18:4:3:2 -chr18 79569899 chr18-79569900-INS-140 G GTCTCAGTACAGCAGGACACACTCTCACCTTCACCGTCTCAGCGCAGCGGGACACGCCATCACCTTCACCGTCTGAGTGCAGCAGGACACGCCCTCACCTTCACCGTCTCAGTACAGCAGGACACGCCCTCACCTTCACCA 4 . ID=chr18-79569900-INS-140;SVTYPE=INS;SVLEN=140;TIG_REGION=h1tg026073l:24510-24649;QUERY_STRAND=+;HOM_REF=0,33;HOM_TIG=0,33;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=627.0 GT:DR:DV:GQ:SUPP 1/1:1:7:9:3 +chr18 79569899 chr18-79569900-INS-140 G GTCTCAGTACAGCAGGACACACTCTCACCTTCACCGTCTCAGCGCAGCGGGACACGCCATCACCTTCACCGTCTGAGTGCAGCAGGACACGCCCTCACCTTCACCGTCTCAGTACAGCAGGACACGCCCTCACCTTCACCA 4 . ID=chr18-79569900-INS-140;SVTYPE=INS;SVLEN=140;TIG_REGION=h1tg026073l:24510-24649;QUERY_STRAND=+;HOM_REF=0,33;HOM_TIG=0,33;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=627.0 GT:DR:DV:GQ:SUPP 1/0:1:7:9:3 chr18 79569932 pbsv.INS.1438 C CCGTCTCAGCGCAGCGGGACACGCCATCACCTTCACCGTCTGAGTGCAGCAGGACACGCCCTCACCTTCACCGTCTCAGTACAGCAGGACACGCCCTCACCTTCACCATCTCAGTACAGCAGGACACACTCTCACCTTCACTGTCTCAGTATAGCGGTCCACGCCCTCACCTTCACCGTCTCAGTACAGCCAAACACGCCCTCACCTTCAC 2 PASS SVTYPE=INS;SVLEN=210;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,8:8:0,0,5,3:4 -chr18 79570059 chr18-79570060-INS-70 G GCCCTCACCTTCACCGTCTCAGCACAGCAGGACATGCCCTCACCTTCACCGTCTCAGTACAGCAGGACATA 4 . ID=chr18-79570060-INS-70;SVTYPE=INS;SVLEN=70;TIG_REGION=h1tg026073l:24810-24879;QUERY_STRAND=+;HOM_REF=0,21;HOM_TIG=0,21;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=627.1 GT:DR:DV:GQ:SUPP 1/1:1:7:9:3 -chr18 79584136 chr18-79584137-INS-243 C CGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCGGGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCGGGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCACCGG 4 . ID=chr18-79584137-INS-243;SVTYPE=INS;SVLEN=243;TIG_REGION=h1tg026073l:38951-39193;QUERY_STRAND=+;HOM_REF=0,23;HOM_TIG=0,23;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=628.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,6:6:.:6:16:0,0,5,1:7 +chr18 79570059 chr18-79570060-INS-70 G GCCCTCACCTTCACCGTCTCAGCACAGCAGGACATGCCCTCACCTTCACCGTCTCAGTACAGCAGGACATA 4 . ID=chr18-79570060-INS-70;SVTYPE=INS;SVLEN=70;TIG_REGION=h1tg026073l:24810-24879;QUERY_STRAND=+;HOM_REF=0,21;HOM_TIG=0,21;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=627.1 GT:DR:DV:GQ:SUPP 1/0:1:7:9:3 +chr18 79584136 chr18-79584137-INS-243 C CGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCCCCCCCGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCGGGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCCCCGGGTGCTCCTGGGCGTGGGCAGGGCGTGCCCCCCCCCACCGG 4 . ID=chr18-79584137-INS-243;SVTYPE=INS;SVLEN=243;TIG_REGION=h1tg026073l:38951-39193;QUERY_STRAND=+;HOM_REF=0,23;HOM_TIG=0,23;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=628.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,6:6:.:6:16:0,0,5,1:7 chr18 79585703 pbsv.DEL.1440 GCACACTCCCACACCCCATGCTCCCACTGTGTCCCCA G 2 PASS SVTYPE=DEL;SVLEN=-36;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,5,1:4 chr18 79610384 pbsv.DEL.1441 CTGAGCCACCCCAGGCAGGCTGAGCCCCCGCCTC C 2 PASS SVTYPE=DEL;SVLEN=-33;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,3:7:3,1,2,1:4 -chr18 79617314 chr18-79617315-INS-274;pbsv.INS.1442 C CCCCCGGGACCCCGCCCTCCCCGGGACCCCGCCCCCCAGGACCCCGCCCCCCCAGGACCCCCGCCCCCCTGTATGCCGCCCTCCCCGGGACCCCGCCCCCCCGGGACCCCGCCCCCCCCGGGACCCCGCCCCCCGGGATGCCGCCCTCCCCGGGACCCCGCCCCCCGGGACCCCGCCCTCCCCGGGACCCCGCCCCCCGGGACCCCGCCCTCCCCGGGACCCCGCCCCCCAGGACCCCGCCCCCCCAGGACCCCCGCCCCCCTGTATGCCGCCCT 4 PASS ID=chr18-79617315-INS-274;SVTYPE=INS;SVLEN=274;TIG_REGION=h1tg026073l:72305-72578;QUERY_STRAND=+;HOM_REF=0,16;HOM_TIG=0,16;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=629.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:3:18:7 +chr18 79617314 chr18-79617315-INS-274;pbsv.INS.1442 C CCCCCGGGACCCCGCCCTCCCCGGGACCCCGCCCCCCAGGACCCCGCCCCCCCAGGACCCCCGCCCCCCTGTATGCCGCCCTCCCCGGGACCCCGCCCCCCCGGGACCCCGCCCCCCCCGGGACCCCGCCCCCCGGGATGCCGCCCTCCCCGGGACCCCGCCCCCCGGGACCCCGCCCTCCCCGGGACCCCGCCCCCCGGGACCCCGCCCTCCCCGGGACCCCGCCCCCCAGGACCCCGCCCCCCCAGGACCCCCGCCCCCCTGTATGCCGCCCT 4 PASS ID=chr18-79617315-INS-274;SVTYPE=INS;SVLEN=274;TIG_REGION=h1tg026073l:72305-72578;QUERY_STRAND=+;HOM_REF=0,16;HOM_TIG=0,16;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=629.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:3:18:7 chr18 79617369 chr18-79617370-INS-97 G GACCCCGCCCTCCCCGGGACCCCCGCCCCCCTGTATGCCGCCCTCCCCGGGACCCCGCCCCCCAGGACCCCGCCCCCCCAGGACCCCCGCCCCCCTGT 4 . ID=chr18-79617370-INS-97;SVTYPE=INS;SVLEN=97;TIG_REGION=h2tg024158l:18518-18614;QUERY_STRAND=+;HOM_REF=0,1;HOM_TIG=0,1;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=629.1 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,4:7:3:4:18:2,1,2,2:7 chr18 79618581 pbsv.DEL.1444 TTGTGTGAAATCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGCGAGCACACTGTTTACATGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGCGAGCACACTGTTTACATGCTAACAGGATCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGCGAGCACACTGTTTACATGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACCACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTGTGAGCACACTGTTTACATGCTAACAGGATCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACAC T 2 PASS SVTYPE=DEL;SVLEN=-832;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:4,4,0,1:4 chr18 79618582 Sniffles2.DEL.3BBS11 TGTGTGAAATCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGACGACAGCAGACACT T 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-176;SUPPORT=2;COVERAGE=7,6,6,9,9;STRAND=+-;AF=0.286;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:6:5:2:2 @@ -1940,12 +1940,12 @@ chr18 79619686 chr18-79619687-DEL-56 CGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTGTGAG chr18 79620084 pbsv.INS.1449 G GTGAGCACACTGTTTACACACTAACAGGATGACAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACACTAACAGGATGACAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACGTGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCCCACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTG 2 PASS SVTYPE=INS;SVLEN=655;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:4,2,0,1:4 chr18 79620530 chr18-79620531-INS-720 C CGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACGTGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCCCACTGTTTACACGCTAACAGGATGACAGCAGACATTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGATCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGACGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATCACAGCAGACACTGTGTGAAATCAGTCCGTGTGAGCACACTGTTTACATGCTAACAGGATGACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTATGTGCTAACAGGACCACAGCAGACACTGTGTGAAATCAGTCAGTGTGAGCACACTGTTTACACGCTAACAGGAT 4 . ID=chr18-79620531-INS-720;SVTYPE=INS;SVLEN=720;TIG_REGION=h2tg024158l:21710-22429;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,27;AC=1 GT:SUPP 0/1:1 chr18 79620746 pbsv.INS.1450 C CACACTGTTTACACGCTAACAGGATGACAGCAGACACTGTGTGAAATCGGTCAGTGTGAGCACACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGACGTGGACACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGAGGTGGAGACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGAGGTGG 2 PASS SVTYPE=INS;SVLEN=210;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,2:7:3,2,1,1:4 -chr18 79620746 chr18-79620747-INS-150 C CACACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGACGTGGACACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGAGGTGGAGACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGAGGTGG 4 . ID=chr18-79620747-INS-150;SVTYPE=INS;SVLEN=150;TIG_REGION=h1tg026073l:76074-76223;QUERY_STRAND=+;HOM_REF=0,45;HOM_TIG=0,45;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=630.3 GT:DR:DV:GQ:SUPP 0/1:4:2:8:3 +chr18 79620746 chr18-79620747-INS-150 C CACACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGACGTGGACACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGAGGTGGAGACTGTTTAGAAACACAGATGGAGACAGCTGGAGCGTGTGTGGAGGTGG 4 . ID=chr18-79620747-INS-150;SVTYPE=INS;SVLEN=150;TIG_REGION=h1tg026073l:76074-76223;QUERY_STRAND=+;HOM_REF=0,45;HOM_TIG=0,45;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=630.3 GT:DR:DV:GQ:SUPP 1/0:4:2:8:3 chr18 79620936 pbsv.INS.1451 T TTCCCATCGCCGGGACGCCTGGTCCACGCTCCCGCG 2 PASS SVTYPE=INS;SVLEN=35;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:6,1:7:4,2,0,1:4 -chr18 79622765 chr18-79622766-INS-77;pbsv.INS.1452 G GTTGGTTTGGTGTGAAGACCCCACCCATTCAATGTAATTTATTAAAGGTCATTTTCTTCTACTGCAATGAACCCAGCA 4 PASS ID=chr18-79622766-INS-77;SVTYPE=INS;SVLEN=77;TIG_REGION=h1tg026073l:78242-78318;QUERY_STRAND=+;HOM_REF=0,102;HOM_TIG=0,102;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=631.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:2:8:7 +chr18 79622765 chr18-79622766-INS-77;pbsv.INS.1452 G GTTGGTTTGGTGTGAAGACCCCACCCATTCAATGTAATTTATTAAAGGTCATTTTCTTCTACTGCAATGAACCCAGCA 4 PASS ID=chr18-79622766-INS-77;SVTYPE=INS;SVLEN=77;TIG_REGION=h1tg026073l:78242-78318;QUERY_STRAND=+;HOM_REF=0,102;HOM_TIG=0,102;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=631.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:2:8:7 chr18 79622765 chr18-79622766-DEL-77;pbsv.DEL.1453 GTTGGTTTGGTGTGAAGACCCCACCCATTCAATGTAATTTATTAAAGGTCATTTTCTTCTACTGCAATGAACCCAGCA G 4 PASS ID=chr18-79622766-DEL-77;SVTYPE=DEL;SVLEN=-77;TIG_REGION=h2tg024158l:24700-24700;QUERY_STRAND=+;HOM_REF=0,25;HOM_TIG=0,25;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=631.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:4:8:7 chr18 79623688 chr18-79623689-INS-94;pbsv.INS.1454 A AGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGG 4 PASS ID=chr18-79623689-INS-94;SVTYPE=INS;SVLEN=94;TIG_REGION=h2tg024158l:25546-25639;QUERY_STRAND=+;HOM_REF=0,93;HOM_TIG=0,93;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=632.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:4:8:7 -chr18 79623688 chr18-79623689-INS-282;pbsv.INS.1455 A AGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCTGCAGACACGGGACTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCAGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGAGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGG 4 PASS ID=chr18-79623689-INS-282;SVTYPE=INS;SVLEN=282;TIG_REGION=h1tg026073l:79242-79523;QUERY_STRAND=+;HOM_REF=0,93;HOM_TIG=0,93;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=632.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:2:8:7 +chr18 79623688 chr18-79623689-INS-282;pbsv.INS.1455 A AGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCTGCAGACACGGGACTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCAGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGAGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGGGGCTCCTGCAGACACGGGGCTGAGGTGTATACAGTAGGTAATAGAGG 4 PASS ID=chr18-79623689-INS-282;SVTYPE=INS;SVLEN=282;TIG_REGION=h1tg026073l:79242-79523;QUERY_STRAND=+;HOM_REF=0,93;HOM_TIG=0,93;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=632.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:4:2:8:7 chr18 79633508 pbsv.INS.1457 G GATGGTGGTGACGGTGATGGTGGTGATGGTGATGATTGTGGTGATCATGGTGGTGGTGGTG 2 PASS SVTYPE=INS;SVLEN=60;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:2,3,1,0:4 chr18 79633527 chr18-79633528-INS-63 G GTGGTGATGGTGATGATTGTGGTGATCATGGTGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGA 4 . ID=chr18-79633528-INS-63;SVTYPE=INS;SVLEN=63;TIG_REGION=h2tg024158l:35473-35535;QUERY_STRAND=+;HOM_REF=0,2;HOM_TIG=0,5;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=633.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:3,3:6:1:4:1:2,1,1,2:7 chr18 79633586 pbsv.INS.1459 G GATGATGGTGGTGATGATGGTA 2 PASS SVTYPE=INS;SVLEN=21;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,1:6:2,3,1,0:4 @@ -1958,7 +1958,7 @@ chr18 79648743 chr18-79648744-INS-114 T TCCCCCCTCTAGCACCCTCGGTCCTCAGTCCCACCGCCCC chr18 79648898 pbsv.INS.1462 C CCTCAGCACCCTGTCTCAGTCCCCTGCCCCCTCCCTCAGTCCCGCGCCCTCTCAGCACCTGTCCTCAGTCCCG 2 PASS SVTYPE=INS;SVLEN=72;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,2:2:0,0,0,2:4 chr18 79649055 pbsv.DEL.1463 CCTCGGTCCTCAGTCCTGCAGCCCCCTCCAGCACA C 2 PASS SVTYPE=DEL;SVLEN=-34;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:1,2:3:0,1,0,2:4 chr18 79685010 Sniffles2.INS.210S11 G GTGCAGGGACCTCGTGGTCTCTAGTCCCGGTTTCTCCGCGGTGCTCCTTACGGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCGGTTTCTCTGCGGTGCCCCTTACGGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCGGTTTCTCCGCGGTGCTCCTTACAGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCAGTTTCTCTGCGGTGCTCCTTACGGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCGGTTTCTCTGCGGTGCTCCTTACGGGGTGTGAGGTCCTGGTGAGGAGGACGGTGCAGGGACCTCGTGGTCTCTACTCCCGGTTTCTCTGCGGGTGCCCCTTACGGGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCGGTTTCTCTGCGGTGCCCCTTACGGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCGGTTTCTCCGCGGTGCTCCTTACAGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCAGTTTCTCTGCGGTGCTCCTTACGGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCGGTTTCTCTGCGGTGCTCCTTACGGGGGTGTGAGGTCCTGGTGAGGAGGACGGTGCAGGGACCTCGTGGTCTCTACTCCCGGTTTCTCTGCGGTGCCCCTTATGGGGTGTGAGGTCCTGGTGAGGATCAGTGCAGGGACCTCGTGGTCTCTACTCCCAGTTTCTCTGCGGTGCCCCTTACGGAGTGTGAGGTCCTGGTGAGGATCA 3 GT PRECISE;SVTYPE=INS;SVLEN=931;SUPPORT=2;COVERAGE=10,9,9,9,9;STRAND=+-;AF=0.222;STDEV_LEN=1.414;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=635.1 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:8,2:10:3,5,1,1:6 -chr18 79685054 chr18-79685055-INS-79;pbsv.INS.1465 T TCCTTACGGGGTGTGAGGTCCTGGTGAGGAGGACGGTGCAGGGACCTCGTGGTCTCTACTCCCAGTTTCTCTGCGGTGCC 4 PASS ID=chr18-79685055-INS-79;SVTYPE=INS;SVLEN=79;TIG_REGION=h1tg026094l:38600-38678,h2tg024113l:38600-38678;QUERY_STRAND=+,+;HOM_REF=0,40;HOM_TIG=0,40;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=635.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:7:.:7 +chr18 79685054 chr18-79685055-INS-79;pbsv.INS.1465 T TCCTTACGGGGTGTGAGGTCCTGGTGAGGAGGACGGTGCAGGGACCTCGTGGTCTCTACTCCCAGTTTCTCTGCGGTGCC 4 PASS ID=chr18-79685055-INS-79;SVTYPE=INS;SVLEN=79;TIG_REGION=h1tg026094l:38600-38678,h2tg024113l:38600-38678;QUERY_STRAND=+,+;HOM_REF=0,40;HOM_TIG=0,40;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=635.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:2:7:.:7 chr18 79687333 Sniffles2.INS.211S11 C CCAGTTCACTGGTGGGCCTGCACCGGAGCAGTTGGCTTCTCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGGCTTCTCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGGCTTCGTCAGTTCACTGGTGGGCCTGCACCGGAGCAGTTGGCTTCTCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGGCTTCTCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGGCTTCTCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGGCTTCTCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGACTTCGCCAGTTCACTGGTGGGCCTGCACCGGAGCAGTTGGCTTCTCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGGCTTCGCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGGCTTCGTCAGTTCACTGGTGGGCCTGCACCGGAGCAGTTGGCTTCTCCAGTTCACTGGTGGGCCTGCACCGCAGCAGTTGGCTTCA 3 PASS PRECISE;SVTYPE=INS;SVLEN=520;SUPPORT=2;COVERAGE=7,7,7,7,7;STRAND=+-;AF=0.286;STDEV_LEN=0;STDEV_POS=0;SUPPORT_LONG=0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=636.0 GT:GQ:DR:DV:AD:DP:SAC:SUPP 0/1:.:.:.:6,2:8:2,4,1,1:6 chr18 79691952 pbsv.INS.1467 G GGGGTGGGGGAGGAGTGGACAGCTCCCT 2 PASS SVTYPE=INS;SVLEN=27;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:2,3:5:0,2,2,1:4 chr18 79694322 pbsv.DEL.1468 CGGAGCAGCCCAGCTGGGACGGGAGTGTGGGGGTTGCGAGCTCCTAGGGACACTGAGTGCCGGGCAGCCTCGTGTCCGCGGGGCGCGGTGGTCGGAGCAGCCCGGCTGGGATGGGAGTGTGGGGGCTACAGGCACCTAGGGGTGGGCGCTGAGTGCTGGGCGGTCTCATGTCCACGGGGTGGGGTGGTC C 2 PASS SVTYPE=DEL;SVLEN=-188;SVANN=TANDEM;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=637.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:2:4:8:6 @@ -1970,7 +1970,7 @@ chr18 79732396 pbsv.DEL.1473 CGAGACATGAGAACTCAGGAGTGCTCCCAAAATCACGT C 2 PASS SVT chr18 79739776 pbsv.DEL.1474 AGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCG A 2 PASS SVTYPE=DEL;SVLEN=-330;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=639.1 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:7:19:6 chr18 79739776 chr18-79739777-DEL-360 AGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCGGGACGGGTGGGACTCTCATACCCACGGCCG A 4 . ID=chr18-79739777-DEL-360;SVTYPE=DEL;SVLEN=-360;TIG_REGION=h1tg025371l:38393-38393,h2tg008684l:93274-93274;QUERY_STRAND=+,+;HOM_REF=0,75;HOM_TIG=0,54;AC=2 GT:SUPP 1/1:1 chr18 79742081 pbsv.DEL.1475 AGAGGCCTGGGGGCAGCAGAGGAGGCATGAGGTG A 2 PASS SVTYPE=DEL;SVLEN=-33;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,7:7:0,0,5,2:4 -chr18 79745371 chr18-79745372-DEL-392 GCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGGGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTC G 4 . ID=chr18-79745372-DEL-392;SVTYPE=DEL;SVLEN=-392;TIG_REGION=h2tg008684l:98506-98506;QUERY_STRAND=+;HOM_REF=0,103;HOM_TIG=0,27;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=640.0 GT:DR:DV:GQ:SUPP 1/1:.:4:11:3 +chr18 79745371 chr18-79745372-DEL-392 GCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGGGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTC G 4 . ID=chr18-79745372-DEL-392;SVTYPE=DEL;SVLEN=-392;TIG_REGION=h2tg008684l:98506-98506;QUERY_STRAND=+;HOM_REF=0,103;HOM_TIG=0,27;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=640.0 GT:DR:DV:GQ:SUPP 0/1:.:4:11:3 chr18 79745511 pbsv.DEL.1476 CCCCGCGTCCCTCCCGTGCGGGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTGCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGGGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTCCCCGCGTCCCTCCCGTGCGCGTTCTGTG C 2 PASS SVTYPE=DEL;SVLEN=-420;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,3,1:4 chr18 79752639 pbsv.DEL.1477 CGTAAGGAAAGCCTAGTGGCACCGGCTGGTTATGCAGAGGCTC C 2 PASS SVTYPE=DEL;SVLEN=-42;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,6:6:0,0,4,2:4 chr18 79764427 Sniffles2.DEL.3C6S11 TAGTCCCAACCCCATGTGTGAGTGACCAGGGTCACCAGCAGCGTAGCCCCAACCCCATGTGTGAGTGACCAGGGTCACCAGCAGCATAGCCCCAACCCCATGTGTGAGTGACCAGGGTCACCAGCAGCAT T 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-129;SUPPORT=4;COVERAGE=9,9,9,9,10;STRAND=+-;AF=0.444;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:26:5:4:2 @@ -1985,29 +1985,29 @@ chr18 79771055 pbsv.INS.1479 C CGCCGTCCTCCCCTCCACGCCGTCCTCCCCTCCACACAGGGCTCCCCTC chr18 79771177 chr18-79771178-INS-715 C CCGTCCTCCCCTCCACGCCGTCCTCCCCTCCACACAGGGCTCCCCTCCACACCGTCCTCCCCTCCATGCCAGCCTCCCCTCCACACCGTCCTCCCCTCCATGCCAGCCTCCCCTCCACACCGTCCTCCCCTCCACACAGGGCTCCCCTCCACACCGTCCTCCCCTCCACGCCGTCCTCCCCTCCACGCCGTCCTCCCCTCCACACAGGGCTCCCCTCCACGCCATCCTCCCCTCCACACCGTCCTCCCCTCCACGCCAGCCTCCCCTCCACGCCGTCCTCCCCTCCACGCCGTCCTCCCCTCCATGCCAGCCTCCCCTCCATGACATCCTCCCTTCCATGACATCCTCCCCTCCACGGCGGCCTCCCCTCCACGCCGTCCTCCCCTCCACACCGTCCTCCCCTCCACGCCGTCCTCCCCTCCACGCCGTCCTCCCCTCCACGCCATCCTCCCCTCCACACAGGGCTCCCCTCCATGCCGTCCTCCCCTCCACACAGGGCTCCCCTCCACGCCAGCCTCCCCTCCATGACATCCTCCCCTCCATGACATCCTCCCTTCCACGCCGTCCTCCCCTCCACACCGGCCTCCCCTCCACGCCGTCCTCCCCTCCACGCCATCCTCCCCTCCACAGCGGCCTCCCCTCCACACTGTCCTCCCCTCCACGCCGTCCTCCCCTCCACGCCAGCCTCCCCTCCATGACATCCTCCCCTCCATGGA 4 . ID=chr18-79771178-INS-715;SVTYPE=INS;SVLEN=715;TIG_REGION=h2tg008684l:123185-123899;QUERY_STRAND=+;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=642.0 GT:AD:DP:SAC:SUPP 0/1:2,3:5:1,1,2,1:5 chr18 79771281 Sniffles2.INS.216S11 T TCCTCCCTCCATGCCAGCCTCCCCTCCATGACATCCTCCCTTCCATGACA 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=53;SUPPORT=2;COVERAGE=5,5,4,4,5;STRAND=-;AF=0.5;STDEV_LEN=2.121;STDEV_POS=34.648;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:14:2:2:2 chr18 79771308 Sniffles2.INS.218S11 C CATGACATCCTCCTTCCCATGACATCCTCCCCTCCACGGCGGCCTCCCCTCCACGCGTCCTCCCCCTCCACACCGTCCTCCCTCCTTCCTCCCCTCCACACAGGGCTCCCTCCATGCCGTCCTCCCCTCCACACAGGGCTCCCCTCCACGCCAGCCTCCCCTCCATGACATCCTCCCCTCCATGACATCCTCCCTTCCACGCCGTCCTCCCCTCCACACCGGCCTCCCCTCCACGCCGTCCTCCCCTCCACGCCATCCTCCCCTCCACAGCGGCCTCCCCTCCACACTGACAGGGCTCCCCTCCACGCCGTCCTCCCCTCCACACCATCCTCATCCCCTCCACACCGTCCTCCCTTCCACACCGTCCTCCCCCTCCACGCCATCCTCCCCTCCACACCGTCCTCCCCTCCACGCCGTCCTCCCCTCCACACCGTCCTCCCCTCCACGCCGGCCCCCCCACGCCGTCCTCCCCTCCACGCCGTCCTCCCCTCTCCACGCCGTCTCCCCTCCATGACATCCTCCTTCCAT 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=595;SUPPORT=3;COVERAGE=5,4,4,4,5;STRAND=+-;AF=0.75;STDEV_LEN=38.682;STDEV_POS=131.465;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:1:1:3:2 -chr18 79772465 chr18-79772466-INS-58;pbsv.INS.1481 A AAGGAGAGGAGGGTCGGGTGCAGGGCCGGGTCCTGTCCTGCTGAGTCCATGGGGAGGTG 4 PASS ID=chr18-79772466-INS-58;SVTYPE=INS;SVLEN=58;TIG_REGION=h2tg008684l:125188-125245;QUERY_STRAND=+;HOM_REF=0,42;HOM_TIG=0,42;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=643.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:1:4:1:7 +chr18 79772465 chr18-79772466-INS-58;pbsv.INS.1481 A AAGGAGAGGAGGGTCGGGTGCAGGGCCGGGTCCTGTCCTGCTGAGTCCATGGGGAGGTG 4 PASS ID=chr18-79772466-INS-58;SVTYPE=INS;SVLEN=58;TIG_REGION=h2tg008684l:125188-125245;QUERY_STRAND=+;HOM_REF=0,42;HOM_TIG=0,42;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=643.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:1:4:1:7 chr18 79777026 pbsv.DEL.1482 TCATGGAGGATGGAGACAGCTCTAGGGTGGAGGACTGC T 2 PASS SVTYPE=DEL;SVLEN=-37;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,2:5:2,1,1,1:4 chr18 79780268 pbsv.DEL.1483 CGGGTGCACACTGTCCGCCCTGGACCAGCCAGGACTTTGCTTCCTGCATCTTAGACCCTGCTGACCTCACCCTCCAGAGGCTGCCCTGTGAACATCAGTGCTGGCCG C 2 PASS SVTYPE=DEL;SVLEN=-106;SVANN=TANDEM;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=644.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:2:11:6 chr18 79807991 Sniffles2.DEL.3CCS11 CCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTACGGTC C 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-60;SUPPORT=4;COVERAGE=7,7,7,7,6;STRAND=+-;AF=0.571;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:18:3:4:2 -chr18 79808027 chr18-79808028-DEL-360 GCTGACCACACTCCACGTTACGGTCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGAAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGAAGCTGCCGGGGACACA G 4 . ID=chr18-79808028-DEL-360;SVTYPE=DEL;SVLEN=-360;TIG_REGION=h1tg007355l:39725-39725;QUERY_STRAND=-;HOM_REF=0,19;HOM_TIG=0,19;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=645.0 GT:DR:DV:GQ:SUPP 0/1:2:4:8:3 +chr18 79808027 chr18-79808028-DEL-360 GCTGACCACACTCCACGTTACGGTCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGAAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGAAGCTGCCGGGGACACA G 4 . ID=chr18-79808028-DEL-360;SVTYPE=DEL;SVLEN=-360;TIG_REGION=h1tg007355l:39725-39725;QUERY_STRAND=-;HOM_REF=0,19;HOM_TIG=0,19;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=645.0 GT:DR:DV:GQ:SUPP 1/0:2:4:8:3 chr18 79808027 pbsv.DEL.1484 GCTGACCACACTCCACGTTACGGTCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGAAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGAAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGACACA G 2 PASS SVTYPE=DEL;SVLEN=-420;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:1,2,1,3:4 chr18 79808251 pbsv.DEL.1485 AAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGAAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCTCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGAAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGG A 2 PASS SVTYPE=DEL;SVLEN=-480;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:3,4:7:1,2,1,3:4 chr18 79808671 chr18-79808672-DEL-60 AAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGG A 4 . ID=chr18-79808672-DEL-60;SVTYPE=DEL;SVLEN=-60;TIG_REGION=h1tg007355l:39441-39441;QUERY_STRAND=-;HOM_REF=0,71;HOM_TIG=0,71;AC=1 GT:SUPP 1/0:1 chr18 79809276 pbsv.DEL.1486 GCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGACACACTGACCACACTCCACGTTATGGGCCCAGAGTCCTCGCTCTGAGGAGCTGCCGGGGACACACTGACCACACTCCACGTTACGGTCCCAGAGTCCTCGCCCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTATGGGCCCAGAGTCCGCGCTCTGAGGAGCTGCCGGGGCCGCGCTGACCACACTCCACGTTACCGGCCCAGAGTCCGCGCTCTGAGGAGCTGC G 2 PASS SVTYPE=DEL;SVLEN=-301;SVANN=TANDEM;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=646.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:4:2:8:6 chr18 79828967 chr18-79828968-DEL-113;pbsv.DEL.1487 ATGTGGGTGTCTATGTGTGCGTGTGTGTAACATGTCCATGATGTGTGCATGTGTCTGTGTGTGGGTGTCTATGTGTGCGTGTGTGTAACGTGTCTGTGTGTGCATGTGTCTGTG A 4 PASS ID=chr18-79828968-DEL-113;SVTYPE=DEL;SVLEN=-113;TIG_REGION=h1tg007355l:19200-19200,h2tg019078l:15681-15681;QUERY_STRAND=-,-;HOM_REF=0,88;HOM_TIG=0,88;SVANN=TANDEM;AC=4;NumCollapsed=1;NumConsolidated=1;CollapseId=647.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:9:25:7 chr18 79831179 pbsv.INS.1489 G GGTTCCCTGCGGACAGAGCCTTCGTCAGGAGC 2 PASS SVTYPE=INS;SVLEN=31;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,5:9:1,3,4,1:4 -chr18 79831241 chr18-79831242-INS-93 G GGTTCCCTGCGGACAGAGCCTTCGTCAGGAGGGTTCCCTGCGGACAGAGCCTTCGTCAGGAGGGTTCCCTGCGGACAGAGCCTTCGTCAGGAGG 4 . ID=chr18-79831242-INS-93;SVTYPE=INS;SVLEN=93;TIG_REGION=h1tg007355l:16944-17036;QUERY_STRAND=-;HOM_REF=361,309;HOM_TIG=0,340;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=648.0 GT:AD:DP:SAC:SUPP 0/1:7,2:9:4,3,1,1:5 -chr18 79857063 chr18-79857064-INS-632 C CGCCCCCCACAGCCCGCCCCCCCCCACAGCCGCCCCCCCCCACAGCCGCCCACCCCCCTCACAGCCACCCCCCCCACAGCCACCCCCCTCCACAGCCACCCCCCCCCACAGCCGCCCCCCACAGCCGCCCCCCCACAGCCGCCCCCCCCCACAGCCGCCCCCCACAGCCACCCCCCCACAGCCGCCCCCCACAGCCACCCCCCCCACAGCCACCCCCCCACAGCCGCCCCCACAGCCACCCCCCCACAGCCACCCCCCCACAGCCACCCCCCCCACAGCCGCCCCCCCCACAGCCGCCCCCACAGCCGCCCCCCACAGCCGCCCCCCACAGCCACCCCCCAAAGCCACCTCCCCACAGCCGCCCCCCACAGCCACCCCCCCCACAGCCGCCCCCCACAGCCACCCCCCCCACAGCCACCCCCCCACAGCCGCCCCCACAGCCACCCCCCCCACAGCCACCCCCCCACAGCCACCCCCCCACAGCCGCCCCCCACAGCCGCCCCCCACAGCCACCCCCCCACAGCCACCCCCCCCACAGCCACCCCCCCCACAGCCGCCCCCACAGCCGCCCCCCACAGCCGCCCCCCCACAGCCACCCCCCCACAGCCGCCCCCGCAGCTGCCCCCCACAGCT 4 . ID=chr18-79857064-INS-632;SVTYPE=INS;SVLEN=632;TIG_REGION=h1tg008468l:317382-318013;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,6;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=649.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,3:3:.:3:8:0,0,2,1:7 -chr18 79865150 chr18-79865151-INS-195;pbsv.INS.1491 C CCTGGGTGCTGAGAGGTCTGGCTGCTGAGAGGTCTGGGTGCTGAGATATCTGGCTGCTGAGAGGTCTGTGCTGAGAGGTCTGTGTGCTGAGAGTGTGGGTGCTGAGGTCTGGGTGCTGAGGTCTGTGTGCTGAGAGGTCTGTGTGCTGAGGTCTGGGTGCTGAGGTCTGGGTGCTGAGAGGTCTGGGTGCTGAGGT 4 PASS ID=chr18-79865151-INS-195;SVTYPE=INS;SVLEN=195;TIG_REGION=h1tg008468l:309092-309286;QUERY_STRAND=-;HOM_REF=0,214;HOM_TIG=0,214;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=650.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:2:3:11:7 +chr18 79831241 chr18-79831242-INS-93 G GGTTCCCTGCGGACAGAGCCTTCGTCAGGAGGGTTCCCTGCGGACAGAGCCTTCGTCAGGAGGGTTCCCTGCGGACAGAGCCTTCGTCAGGAGG 4 . ID=chr18-79831242-INS-93;SVTYPE=INS;SVLEN=93;TIG_REGION=h1tg007355l:16944-17036;QUERY_STRAND=-;HOM_REF=361,309;HOM_TIG=0,340;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=648.0 GT:AD:DP:SAC:SUPP 1/0:7,2:9:4,3,1,1:5 +chr18 79857063 chr18-79857064-INS-632 C CGCCCCCCACAGCCCGCCCCCCCCCACAGCCGCCCCCCCCCACAGCCGCCCACCCCCCTCACAGCCACCCCCCCCACAGCCACCCCCCTCCACAGCCACCCCCCCCCACAGCCGCCCCCCACAGCCGCCCCCCCACAGCCGCCCCCCCCCACAGCCGCCCCCCACAGCCACCCCCCCACAGCCGCCCCCCACAGCCACCCCCCCCACAGCCACCCCCCCACAGCCGCCCCCACAGCCACCCCCCCACAGCCACCCCCCCACAGCCACCCCCCCCACAGCCGCCCCCCCCACAGCCGCCCCCACAGCCGCCCCCCACAGCCGCCCCCCACAGCCACCCCCCAAAGCCACCTCCCCACAGCCGCCCCCCACAGCCACCCCCCCCACAGCCGCCCCCCACAGCCACCCCCCCCACAGCCACCCCCCCACAGCCGCCCCCACAGCCACCCCCCCCACAGCCACCCCCCCACAGCCACCCCCCCACAGCCGCCCCCCACAGCCGCCCCCCACAGCCACCCCCCCACAGCCACCCCCCCCACAGCCACCCCCCCCACAGCCGCCCCCACAGCCGCCCCCCACAGCCGCCCCCCCACAGCCACCCCCCCACAGCCGCCCCCGCAGCTGCCCCCCACAGCT 4 . ID=chr18-79857064-INS-632;SVTYPE=INS;SVLEN=632;TIG_REGION=h1tg008468l:317382-318013;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,6;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=649.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,3:3:.:3:8:0,0,2,1:7 +chr18 79865150 chr18-79865151-INS-195;pbsv.INS.1491 C CCTGGGTGCTGAGAGGTCTGGCTGCTGAGAGGTCTGGGTGCTGAGATATCTGGCTGCTGAGAGGTCTGTGCTGAGAGGTCTGTGTGCTGAGAGTGTGGGTGCTGAGGTCTGGGTGCTGAGGTCTGTGTGCTGAGAGGTCTGTGTGCTGAGGTCTGGGTGCTGAGGTCTGGGTGCTGAGAGGTCTGGGTGCTGAGGT 4 PASS ID=chr18-79865151-INS-195;SVTYPE=INS;SVLEN=195;TIG_REGION=h1tg008468l:309092-309286;QUERY_STRAND=-;HOM_REF=0,214;HOM_TIG=0,214;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=650.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:2:3:11:7 chr18 79866008 pbsv.INS.1492 A AGAGGTCTGTGTTCTGAGAGGTCTGTGTTCT 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:2,2,0,1:4 chr18 79866008 pbsv.INS.1493 A AGAGGTCTGTGTTCTGAGAGGTCTGTGTTCT 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:0,1,2,2:4 chr18 79866778 pbsv.INS.1494 A ATGCTGAGAGGTCTAGGTGCTGAGGTCTGGG 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:2,2,0,1:4 chr18 79866778 pbsv.INS.1495 A ATGCTGAGAGGTCTAGGTGCTGAGGTCTGGG 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:0,1,2,2:4 -chr18 79867000 chr18-79867001-INS-154;pbsv.INS.1496 T TGTGCTGAGAGGTCTGTGTGCTGAGAGGTCTGGGTGCCGAGGTCTGGGTGCTGAGAGGTCTGGGTGCTGAGGCCTGGGTGCTGAGAGGTCTGGGTGCTGAGGTCTGGGTGCTGAGAGGTCTGTGTTCTCAGAGATTTGGGTGCTAAGAGGCCTGG 4 PASS ID=chr18-79867001-INS-154;SVTYPE=INS;SVLEN=154;TIG_REGION=h1tg008468l:307042-307195;QUERY_STRAND=-;HOM_REF=0,124;HOM_TIG=0,124;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=651.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/1:.,.:.:.:.:5:13:7 +chr18 79867000 chr18-79867001-INS-154;pbsv.INS.1496 T TGTGCTGAGAGGTCTGTGTGCTGAGAGGTCTGGGTGCCGAGGTCTGGGTGCTGAGAGGTCTGGGTGCTGAGGCCTGGGTGCTGAGAGGTCTGGGTGCTGAGGTCTGGGTGCTGAGAGGTCTGTGTTCTCAGAGATTTGGGTGCTAAGAGGCCTGG 4 PASS ID=chr18-79867001-INS-154;SVTYPE=INS;SVLEN=154;TIG_REGION=h1tg008468l:307042-307195;QUERY_STRAND=-;HOM_REF=0,124;HOM_TIG=0,124;SVANN=TANDEM;AC=3;NumCollapsed=1;NumConsolidated=1;CollapseId=651.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 1/0:.,.:.:.:.:5:13:7 chr18 79867025 chr18-79867026-INS-155;pbsv.INS.1497 A AGGTCTGGGTGCCGAGGTCTGGGTGCTGAGAGGTCTGGGTGCTGAGGCCTGGGTGCTGAGAGGTCTGGGTGCTGAGGTCTGGGTGCTGAGAGGTCTGTGTCTCAGAGATTTTGGGTGCTAAGAGGCCTGGGTGCTGAGAGGTCTGTGTGCTGAGAG 4 PASS ID=chr18-79867026-INS-155;SVTYPE=INS;SVLEN=155;TIG_REGION=h2tg016591l:55756-55910;QUERY_STRAND=-;HOM_REF=0,99;HOM_TIG=0,99;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 0/1:4,1:5:2,2,0,1:5 chr18 79878296 pbsv.INS.1498 C CGCCTGATGCCCACGTGGCAGTGTGCGGAGGGC 2 PASS SVTYPE=INS;SVLEN=32;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,4:8:2,2,2,2:4 chr18 79882753 pbsv.INS.1499 C CCGTGGAGCGCGGAGGCCGGGTACACCTGCG 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,12:12:0,0,8,4:4 -chr18 79882753 chr18-79882754-INS-60 C CCGTGGAGCGCGGAGGCCGGGTACGCCTGCGCGTGGAGCGCGGAGGCCGGGTACACCTGCG 4 . ID=chr18-79882754-INS-60;SVTYPE=INS;SVLEN=60;TIG_REGION=h1tg008468l:291224-291283;QUERY_STRAND=-;HOM_REF=0,23;HOM_TIG=0,23;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=652.0 GT:DR:DV:GQ:SUPP 0/1:7:4:20:3 +chr18 79882753 chr18-79882754-INS-60 C CCGTGGAGCGCGGAGGCCGGGTACGCCTGCGCGTGGAGCGCGGAGGCCGGGTACACCTGCG 4 . ID=chr18-79882754-INS-60;SVTYPE=INS;SVLEN=60;TIG_REGION=h1tg008468l:291224-291283;QUERY_STRAND=-;HOM_REF=0,23;HOM_TIG=0,23;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=652.0 GT:DR:DV:GQ:SUPP 1/0:7:4:20:3 chr18 79885784 chr18-79885785-INS-904 A AGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACAGGACAGGGAGATGGGGATGGGAACATAGGGATGTGGGGACAGGAACATGGGGACACAAGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACAGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGAACATGGGGACACG 4 . ID=chr18-79885785-INS-904;SVTYPE=INS;SVLEN=904;TIG_REGION=h2tg016591l:36039-36942;QUERY_STRAND=-;HOM_REF=0,40;HOM_TIG=0,40;AC=1 GT:SUPP 0/1:1 chr18 79885833 chr18-79885834-DEL-618 GGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGAACATGGGGACACAAGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACA G 4 . ID=chr18-79885834-DEL-618;SVTYPE=DEL;SVLEN=-618;TIG_REGION=h1tg008468l:288145-288145;QUERY_STRAND=-;HOM_REF=0,91;HOM_TIG=0,48;AC=1 GT:SUPP 1/0:1 chr18 79885980 pbsv.DEL.1500 TAGGGACGTGGGGACAGGAACATGGGGACACAAGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACAAGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGAC T 2 PASS SVTYPE=DEL;SVLEN=-747;SVANN=TANDEM;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=653.6 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:7:3:10:6 @@ -2016,29 +2016,29 @@ chr18 79886167 Sniffles2.INS.222S11 G GGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACAT chr18 79886280 pbsv.INS.1501 G GGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGAACATGGGGACACAAGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGAACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACA 2 PASS SVTYPE=INS;SVLEN=1253;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:5,6:11:4,1,3,3:4 chr18 79886309 Sniffles2.INS.221S11 G GGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGGACATGGGGACACGGGACAGGAGATGGGGATGGGAACATAGGGACGTGGGGACGGGGACATGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACGGGACAGGGAGATG 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=350;SUPPORT=5;COVERAGE=11,11,10,10,10;STRAND=+-;AF=0.5;STDEV_LEN=35.445;STDEV_POS=281.856;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:36:5:5:2 chr18 79886599 chr18-79886600-DEL-128 TAGGGACGTGGGGACGGGGACATGGGGACACGGGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGACAGGGACATGGGGACACAAGACAGGGAGATGGGGATGGGAACATAGGGACGTGGGGAC T 4 . ID=chr18-79886600-DEL-128;SVTYPE=DEL;SVLEN=-128;TIG_REGION=h1tg008468l:287997-287997;QUERY_STRAND=-;HOM_REF=0,6;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 -chr18 79888370 chr18-79888371-DEL-78 ATCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCGTCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCG A 4 . ID=chr18-79888371-DEL-78;SVTYPE=DEL;SVLEN=-78;TIG_REGION=h1tg008468l:286354-286354;QUERY_STRAND=-;HOM_REF=0,104;HOM_TIG=0,104;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=654.1 GT:DR:DV:GQ:SUPP 1/1:.:11:30:3 -chr18 79888370 chr18-79888371-DEL-117;pbsv.DEL.1502 ATCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCGTCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCGTCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCG A 4 PASS ID=chr18-79888371-DEL-117;SVTYPE=DEL;SVLEN=-117;TIG_REGION=h2tg016591l:33087-33087;QUERY_STRAND=-;HOM_REF=0,65;HOM_TIG=0,65;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 1/1:0,11:11:0,0,6,5:5 -chr18 79894298 chr18-79894299-INS-245 A AATAGTACGATTGATATAGTTGGGTCTGTGTCTGCTTTTGATTGGGTTGTTGACTCCATTCACATCTAATGTTACGATTGATATAGTTGGGTCTGCGTCTGCTTTTGATTGGGTTCTTCACTCCATTCATAACGATTGATATAGTTGGGTCTGTGTCTGCCTTTGATTGGGTTGTTCATGCCATTAATAACGATATAGTTGGATCTGTGTCTGCTTTTGATTGGGTTCTTCACTCCATTCACATCT 4 . ID=chr18-79894299-INS-245;SVTYPE=INS;SVLEN=245;TIG_REGION=h1tg008468l:280261-280505,h2tg016591l:27041-27286;QUERY_STRAND=-,-;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=655.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 0/1:4,6:10:.:8:22:2,2,3,3:7 +chr18 79888370 chr18-79888371-DEL-78 ATCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCGTCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCG A 4 . ID=chr18-79888371-DEL-78;SVTYPE=DEL;SVLEN=-78;TIG_REGION=h1tg008468l:286354-286354;QUERY_STRAND=-;HOM_REF=0,104;HOM_TIG=0,104;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=654.1 GT:DR:DV:GQ:SUPP 1/0:.:11:30:3 +chr18 79888370 chr18-79888371-DEL-117;pbsv.DEL.1502 ATCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCGTCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCGTCCTCCTCATGAGGCCGCGGTGGGGCCGGGACGGCGGCG A 4 PASS ID=chr18-79888371-DEL-117;SVTYPE=DEL;SVLEN=-117;TIG_REGION=h2tg016591l:33087-33087;QUERY_STRAND=-;HOM_REF=0,65;HOM_TIG=0,65;SVANN=TANDEM;AC=3 GT:AD:DP:SAC:SUPP 0/1:0,11:11:0,0,6,5:5 +chr18 79894298 chr18-79894299-INS-245 A AATAGTACGATTGATATAGTTGGGTCTGTGTCTGCTTTTGATTGGGTTGTTGACTCCATTCACATCTAATGTTACGATTGATATAGTTGGGTCTGCGTCTGCTTTTGATTGGGTTCTTCACTCCATTCATAACGATTGATATAGTTGGGTCTGTGTCTGCCTTTGATTGGGTTGTTCATGCCATTAATAACGATATAGTTGGATCTGTGTCTGCTTTTGATTGGGTTCTTCACTCCATTCACATCT 4 . ID=chr18-79894299-INS-245;SVTYPE=INS;SVLEN=245;TIG_REGION=h1tg008468l:280261-280505,h2tg016591l:27041-27286;QUERY_STRAND=-,-;HOM_REF=0,2;HOM_TIG=0,2;AC=2;NumCollapsed=2;NumConsolidated=2;CollapseId=655.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:4,6:10:.:8:22:2,2,3,3:7 chr18 79895751 chr18-79895752-INS-67;pbsv.INS.1504 T TATATAGTTCTGTCTGTGTCTGCTATTGATTGGGTTGTTCACTCCATTCACATCTAATGTTATGATTA 4 PASS ID=chr18-79895752-INS-67;SVTYPE=INS;SVLEN=67;TIG_REGION=h2tg016591l:25502-25568;QUERY_STRAND=-;HOM_REF=0,8;HOM_TIG=0,8;SVANN=TANDEM;AC=2;NumCollapsed=1;NumConsolidated=1;CollapseId=656.0 GT:AD:DP:SAC:DR:DV:GQ:SUPP 0/1:.,.:.:.:3:3:21:7 chr18 79909554 pbsv.INS.1505 C CCTCACCAGAGTCCCCAGCCTTCCCCACCAT 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,5:9:1,3,4,1:4 chr18 79910264 pbsv.DEL.1506 ACACCAGAGTCCCCAACCTTCCCCACCACCT A 2 PASS SVTYPE=DEL;SVLEN=-30;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,5:9:1,3,4,1:4 chr18 79912132 pbsv.INS.1507 G GTGGGAGCAGGGAGGGGACGGCAGCAGGGAGGGGA 2 PASS SVTYPE=INS;SVLEN=34;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:4 chr18 79916040 pbsv.DEL.1508 TGCTCCCGTACCCATGGCGCTCCCATACCCACAGC T 2 PASS SVTYPE=DEL;SVLEN=-34;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:8,1:9:4,4,1,0:4 -chr18 79916148 chr18-79916149-INS-61 G GCGGTGCTCTCATACCCGCAGTGCTCCCGTACCCTCCCATACCCACGGTGCTCCCGTACCCA 4 . ID=chr18-79916149-INS-61;SVTYPE=INS;SVLEN=61;TIG_REGION=h1tg008468l:258314-258374;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,60;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=657.0 GT:AD:DP:SAC:SUPP 1/1:0,9:9:0,0,5,4:5 -chr18 79916265 chr18-79916266-INS-61 G GCTCCCGTACCCTCCCATACCCACAGTGCTCCCGTACCCGCGGCGCTCTTGTACCTGCGGCA 4 . ID=chr18-79916266-INS-61;SVTYPE=INS;SVLEN=61;TIG_REGION=h2tg016591l:4881-4941;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=657.1 GT:DR:DV:GQ:SUPP 1/1:.:9:25:3 +chr18 79916148 chr18-79916149-INS-61 G GCGGTGCTCTCATACCCGCAGTGCTCCCGTACCCTCCCATACCCACGGTGCTCCCGTACCCA 4 . ID=chr18-79916149-INS-61;SVTYPE=INS;SVLEN=61;TIG_REGION=h1tg008468l:258314-258374;QUERY_STRAND=-;HOM_REF=0,3;HOM_TIG=0,60;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=657.0 GT:AD:DP:SAC:SUPP 1/0:0,9:9:0,0,5,4:5 +chr18 79916265 chr18-79916266-INS-61 G GCTCCCGTACCCTCCCATACCCACAGTGCTCCCGTACCCGCGGCGCTCTTGTACCTGCGGCA 4 . ID=chr18-79916266-INS-61;SVTYPE=INS;SVLEN=61;TIG_REGION=h2tg016591l:4881-4941;QUERY_STRAND=-;HOM_REF=0,11;HOM_TIG=0,11;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=657.1 GT:DR:DV:GQ:SUPP 0/1:.:9:25:3 chr18 79919664 chr18-79919665-DEL-383 CAGGAACCGAGGGAGAGGTCAAGGTCAGTGGGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGGTCAGTGAGGAGAGACGGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACAGGAACCGAGTGAGAGGTCAGGGTCAGTGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGGTCAGTGGGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAGGGTCAGTGGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACA C 4 . ID=chr18-79919665-DEL-383;SVTYPE=DEL;SVLEN=-383;TIG_REGION=h1tg008468l:254799-254799;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1 GT:SUPP 1/0:1 chr18 79919694 chr18-79919695-DEL-306 GGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGGTCAGTGAGGAGAGACGGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACAGGAACCGAGTGAGAGGTCAGGGTCAGTGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGGTCAGTGGGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAGGGTCAGTGGA G 4 . ID=chr18-79919695-DEL-306;SVTYPE=DEL;SVLEN=-306;TIG_REGION=h2tg016591l:1454-1454;QUERY_STRAND=-;HOM_REF=0,56;HOM_TIG=0,30;AC=1 GT:SUPP 0/1:1 chr18 79919739 pbsv.DEL.1510 ACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGGTCAGTGAGGAGAGACGGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACAGGAACCGAGTGAGAGGTCAGGGTCAGTGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGGTCAGTGGGGAGAGAC A 2 PASS SVTYPE=DEL;SVLEN=-192;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:1,0,2,2:4 chr18 79920115 chr18-79920116-DEL-114 GGGAGAGACGGAACCGAGGGAGAGGTCAGGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGGTCAGTGA G 4 . ID=chr18-79920116-DEL-114;SVTYPE=DEL;SVLEN=-114;TIG_REGION=h2tg016591l:1341-1341;QUERY_STRAND=-;HOM_REF=0,75;HOM_TIG=0,27;AC=1 GT:SUPP 0/1:1 chr18 79920122 pbsv.DEL.1511 ACGGAACCGAGGGAGAGGTCAGGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGGTCAGTGAGGAGAGACGGAACCGAGGGAGAGGTCAGGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGGGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACGGGAACCGAGGGAGAGGTCAAGGTCAGTGGAGGAGAGAC A 2 PASS SVTYPE=DEL;SVLEN=-267;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:1,4:5:1,0,2,2:4 chr18 79920340 pbsv.INS.1512 T TGGGGAGAGATGGAACCGAGTGAGAGGTCAAGCTCAGTGGGGAGAGACGGAACCGAGTGAGAGGTCAAGGTCAGTGGGGAGAGACGGAACCGAGTGAGAGGTCAAGCTCAGTGGGGAGAGATGGAACCAAGTGAGAGGTCAAGGTCAGTGGGGAGAGACGGAACCGAGTGAGAGGTCAGGGTCAGAG 2 PASS SVTYPE=INS;SVLEN=186;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,1:5:2,2,1,0:4 -chr18 79921151 chr18-79921152-DEL-231 ACAGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACGGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACGGGAACCGAGGGAGAGGTCAGGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGAC A 4 . ID=chr18-79921152-DEL-231;SVTYPE=DEL;SVLEN=-231;TIG_REGION=h1tg008468l:253713-253713;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=659.0 GT:AD:DP:SAC:SUPP 1/1:0,4:4:0,0,2,2:5 +chr18 79921151 chr18-79921152-DEL-231 ACAGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACGGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACGGGAACCGAGGGAGAGGTCAGGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGAC A 4 . ID=chr18-79921152-DEL-231;SVTYPE=DEL;SVLEN=-231;TIG_REGION=h1tg008468l:253713-253713;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=1;NumConsolidated=1;CollapseId=659.0 GT:AD:DP:SAC:SUPP 1/0:0,4:4:0,0,2,2:5 chr18 79921536 chr18-79921537-INS-298 G GGAACCAAGTGAGAGGTCAAGGTCAGTGGGGAGAGACAGGAACCGAGGGAGAGGTCAAGCTCAGTGGGGAGAGATGGAACCAAGTGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACGGAACCGAGTGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGGGGAGAGATGGAACCAAGTGAGAGGTCAAGGTCAGTGGGGAGAGATGGAACCAAGTGAGAGGTCAAGGTCAGTGGGGAGAGAC 4 . ID=chr18-79921537-INS-298;SVTYPE=INS;SVLEN=298;TIG_REGION=h1tg008468l:253263-253560;QUERY_STRAND=-;HOM_REF=0,1;HOM_TIG=0,1;AC=1 GT:SUPP 1/0:1 chr18 79921691 Sniffles2.DEL.3D8S11 AACCGAGTGAGAGGTCAAGGTCAGTGGGGAGAGACAGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGGAGGAGAGACAGGAACCGAGGGAGAGGTCAGGGTCAGAGGAGGAGAGACAGGAA A 0 PASS PRECISE;SVTYPE=DEL;SVLEN=-156;SUPPORT=3;COVERAGE=4,4,4,4,4;STRAND=+-;AF=0.75;STDEV_LEN=0;STDEV_POS=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:1:1:3:2 chr18 79921901 chr18-79921902-INS-70 A AGGTCAGTGGGGAGAGATGGACCAAGTGAGAAGTCAAGGTCACGGAGGAGAGTTGGGAACTAAGAGGTCAG 4 . ID=chr18-79921902-INS-70;SVTYPE=INS;SVLEN=70;TIG_REGION=h1tg008468l:252830-252899;QUERY_STRAND=-;HOM_REF=0,8;HOM_TIG=0,8;AC=1 GT:SUPP 1/0:1 -chr18 79947529 chr18-79947530-INS-131 T TCCACCTCTGCTCTCCCCGTCTCCCGCCCCTTCTCACCAGAGCCCAGCCCAGCCCCACCTCTGCTCTCCCCCCCACCCACTCCCCCCAGCCCCTTCTGCCTGGACCCCGGCCCCTTCTCACCGGAGCCTGCC 4 . ID=chr18-79947530-INS-131;SVTYPE=INS;SVLEN=131;TIG_REGION=h1tg008468l:227067-227197;QUERY_STRAND=-;HOM_REF=0,67;HOM_TIG=0,68;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=660.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,4:4:.:4:11:0,0,1,3:7 +chr18 79947529 chr18-79947530-INS-131 T TCCACCTCTGCTCTCCCCGTCTCCCGCCCCTTCTCACCAGAGCCCAGCCCAGCCCCACCTCTGCTCTCCCCCCCACCCACTCCCCCCAGCCCCTTCTGCCTGGACCCCGGCCCCTTCTCACCGGAGCCTGCC 4 . ID=chr18-79947530-INS-131;SVTYPE=INS;SVLEN=131;TIG_REGION=h1tg008468l:227067-227197;QUERY_STRAND=-;HOM_REF=0,67;HOM_TIG=0,68;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=660.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,4:4:.:4:11:0,0,1,3:7 chr18 79952623 pbsv.INS.1515 G GGGCGCGCGGGTGAAGAGTGAGGGGCGCGCT 2 PASS SVTYPE=INS;SVLEN=30;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,2,1:4 -chr18 79952716 chr18-79952717-INS-615 G GCGGGTGAAGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGGCGCGGGATGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGGTGAGGGGTGAGGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGCGGGTGAGGGGGTGAGGGGAGCGCGGGGTGAGGGGTGAGGGGAGGCGCGGGGTGAGGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGGAGCGCGGGTGAGGGGTGCGGGGCGCGCGGGTGAAGTGTGAGGGGCGCGCGGGTGAAGAGTGAGGGGAGCGTGGGTGAGGGGTGAGGGGGCCGCGCCGGTGAAGGGTGAGGGGAGCGTGGTGAGGGGTGAGGCGTGAGTGATGCGCGAGTGAAGGGTGAGGGGCGCC 4 . ID=chr18-79952717-INS-615;SVTYPE=INS;SVLEN=615;TIG_REGION=h1tg008468l:221237-221851;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=661.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/1:0,3:3:.:3:8:0,0,2,1:7 +chr18 79952716 chr18-79952717-INS-615 G GCGGGTGAAGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGGCGCGGGATGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGCGCGCGGGTGAGGGGGTGAGGGGCGCGCGGGTGAGGGGTGAGGGGAGCGCGGGGTGAGGGGTGAGGGGGAGCGCGGGTGAGGGGTGAGGGGAGCGCGCGGGTGAGGGGGTGAGGGGAGCGCGGGGTGAGGGGTGAGGGGAGGCGCGGGGTGAGGGGGTGAGGGGAGCGCGGGTGAGGGGTGAGGGGGAGCGCGGGTGAGGGGTGCGGGGCGCGCGGGTGAAGTGTGAGGGGCGCGCGGGTGAAGAGTGAGGGGAGCGTGGGTGAGGGGTGAGGGGGCCGCGCCGGTGAAGGGTGAGGGGAGCGTGGTGAGGGGTGAGGCGTGAGTGATGCGCGAGTGAAGGGTGAGGGGCGCC 4 . ID=chr18-79952717-INS-615;SVTYPE=INS;SVLEN=615;TIG_REGION=h1tg008468l:221237-221851;QUERY_STRAND=-;HOM_REF=0,0;HOM_TIG=0,0;AC=1;NumCollapsed=2;NumConsolidated=2;CollapseId=661.0 GT:AD:DP:DR:DV:GQ:SAC:SUPP 1/0:0,3:3:.:3:8:0,0,2,1:7 chr18 79952763 pbsv.INS.1517 G GGTGAGGGGCGGGCGGGTGAAGT 2 PASS SVTYPE=INS;SVLEN=22;SVANN=TANDEM;AC=2 GT:AD:DP:SAC:SUPP 1/1:0,3:3:0,0,2,1:4 chr18 80048823 pbsv.INS.1518 A AGCTCAGTGCCTCCTAGAAAGTGGAGTGTGGGCATGTTTGCAGGGGATCCAACCAGGCGTCG 2 PASS SVTYPE=INS;SVLEN=61;SVANN=TANDEM;AC=1 GT:AD:DP:SAC:SUPP 0/1:4,2:6:2,2,2,0:4 chr18 80048974 Sniffles2.INS.22BS11 G GGGCACGTTTGCAGGGGATCCAACCAGGCGTCTGCTCAGTGCCTCCTAGAAAGTGGAGCGTG 3 PASS IMPRECISE;SVTYPE=INS;SVLEN=62;SUPPORT=2;COVERAGE=6,6,6,6,6;STRAND=+;AF=0.333;STDEV_LEN=0.707;STDEV_POS=106.066;SUPPORT_LONG=0;AC=1 GT:GQ:DR:DV:SUPP 0/1:8:4:2:2