Issues

• Issue on (at least one) OSX 13 machine (of uncertain chip state)

  CellProfiler/CellProfiler-Analyst#335 · Filter by author bethac07 opened on Aug 5, 2025

• wx issue on Confusion matrix

  CellProfiler/CellProfiler-Analyst#334 · Filter by author bethac07 opened on Aug 5, 2025
  2

• Suggest Optimization: Replace manual normalization with MinMaxScaler for clarity and correctness

  CellProfiler/CellProfiler-Analyst#332 · Filter by author SaFE-APIOpt opened on Apr 14, 2025

• In plots: filter is ignored when selecting gated cells for collage

  CellProfiler/CellProfiler-Analyst#323 · Filter by author vladimirvig opened on Oct 11, 2023

• Cell-profiler tracer installation: will not run

  CellProfiler/CellProfiler-Analyst#322 · Filter by author loganreilley opened on Sep 15, 2023

• Plate Viewer Won't Generate Plate With Only Middle Wells

  CellProfiler/CellProfiler-Analyst#321 · Filter by author NWood4 opened on Jul 20, 2023

• CPA not able to connect to GitHub to look for updates

  CellProfiler/CellProfiler-Analyst#320 · Filter by author lajomarin opened on Apr 12, 2023

• Provide an option to colour plotted data points by a variable.

  Feature request
  CellProfiler/CellProfiler-Analyst#309 · Filter by author DavidStirling opened on Aug 18, 2021
  2

• Colour thumbnails fail to display properly in the plate viewer

  CellProfiler/CellProfiler-Analyst#306 · Filter by author DavidStirling opened on Jul 15, 2021

• Make lasso tool work on other plots

  CellProfiler/CellProfiler-Analyst#305 · Filter by author bethac07 opened on Jul 13, 2021
  2

• Unify Filters, Gates, Selections, Properties filters and Legacy filters

  CellProfiler/CellProfiler-Analyst#303 · Filter by author DavidStirling opened on Jun 29, 2021

• Migrate to SQLAlchemy

  CellProfiler/CellProfiler-Analyst#302 · Filter by author DavidStirling opened on Jun 29, 2021

• Refactor "Score All"

  CellProfiler/CellProfiler-Analyst#301 · Filter by author DavidStirling opened on Jun 29, 2021

• Linux release

  CellProfiler/CellProfiler-Analyst#300 · Filter by author antonkulaga opened on Jun 21, 2021
  7

• Dimensionality Reduction plot gates will stop working if the reduction method has been changed.

  CellProfiler/CellProfiler-Analyst#299 · Filter by author DavidStirling opened on May 7, 2021

• Running on an M1 Mac

  CellProfiler/CellProfiler-Analyst#297 · Filter by author marcstein opened on May 5, 2021
  10

• Density plot gate does not respect filter

  CellProfiler/CellProfiler-Analyst#290 · Filter by author AugustLundquist opened on Mar 31, 2021
  8

• [Python3_Port] Error when training LogisticRegression classifier

  Python3_Port
  CellProfiler/CellProfiler-Analyst#289 · Filter by author pearlryder opened on Mar 19, 2021
  7

• Bug: Parse Error when editing rules

  CellProfiler/CellProfiler-Analyst#277 · Filter by author pearlryder opened on Feb 16, 2021
  2

• Feature Request - Set Image Size/Scale Separately

  CellProfiler/CellProfiler-Analyst#274 · Filter by author ErinWeisbart opened on Feb 5, 2021
  2

• scatterplot gating

  CellProfiler/CellProfiler-Analyst#273 · Filter by author matfallet opened on Jan 7, 2021

• Is there a way to create a properties file from an existing Mysql database?

  CellProfiler/CellProfiler-Analyst#272 · Filter by author cullenpiv opened on Sep 3, 2020

• Docker image from Docker Hub

  CellProfiler/CellProfiler-Analyst#267 · Filter by author CEDRICHK opened on Apr 16, 2019

• Error loading classifier with saved model. Suggestion: change code in "classifier.py"

  CellProfiler/CellProfiler-Analyst#265 · Filter by author mag345 opened on Oct 5, 2018
  3

• Rules import fails if small decimals use "e" notation

  Bug
  CellProfiler/CellProfiler-Analyst#258 · Filter by author bethac07 opened on Mar 23, 2018