From a821896568aa0da217aa87b5e25d22a912d98122 Mon Sep 17 00:00:00 2001
From: EGI-ILM <ignacio.lamata@egi.eu>
Date: Wed, 20 Nov 2024 16:12:19 +0100
Subject: [PATCH] New instance for Jerico core VLab (See 28433)

---
 .github/workflows/d4science-images.yml        |   1 +
 single-user-d4science-jericocore/Dockerfile   |   8 +
 .../environment.yml                           | 159 ++++++++++++++++++
 single-user-d4science-jericocore/start        |   3 +
 4 files changed, 171 insertions(+)
 create mode 100644 single-user-d4science-jericocore/Dockerfile
 create mode 100644 single-user-d4science-jericocore/environment.yml
 create mode 100644 single-user-d4science-jericocore/start

diff --git a/.github/workflows/d4science-images.yml b/.github/workflows/d4science-images.yml
index d8e2149..9a1392f 100644
--- a/.github/workflows/d4science-images.yml
+++ b/.github/workflows/d4science-images.yml
@@ -27,6 +27,7 @@ jobs:
         "single-user-pluto-d4science/Dockerfile"
         "single-user-sobigdata-itineris/Dockerfile"
         "single-user-sobigdata-itinerisclima/Dockerfile"
+        "single-user-d4science-jericocore/Dockerfile"
 
 
   base-image:
diff --git a/single-user-d4science-jericocore/Dockerfile b/single-user-d4science-jericocore/Dockerfile
new file mode 100644
index 0000000..123ded2
--- /dev/null
+++ b/single-user-d4science-jericocore/Dockerfile
@@ -0,0 +1,8 @@
+# See 28433
+
+# ONBUILD instructions in base-image/Dockerfile are used to
+# perform certain actions based on the presence of specific
+# files (such as conda-linux-64.lock, start) in this repo.
+# Refer to the base-image/Dockerfile for documentation.
+ARG PANGEO_BASE_IMAGE_TAG=2024.11.11
+FROM pangeo/base-image:${PANGEO_BASE_IMAGE_TAG}
diff --git a/single-user-d4science-jericocore/environment.yml b/single-user-d4science-jericocore/environment.yml
new file mode 100644
index 0000000..7131239
--- /dev/null
+++ b/single-user-d4science-jericocore/environment.yml
@@ -0,0 +1,159 @@
+name: pangeo
+channels:
+  - conda-forge
+dependencies:
+  - python<3.10
+  - adlfs
+  - aiobotocore
+  - birdy
+  - black
+  - bokeh
+  - boto3
+  - cdsapi
+  - cf_xarray
+  - cfgrib
+  - cfunits
+  - climpred
+  - coiled
+  - curl
+  - dask-geopandas
+  - dask==2024.7.0
+  - dask-expr
+  - dask-mpi
+  - datashader
+  - datacube
+  - dask-geopandas
+  - depfinder
+  - erddapy
+  - fastparquet
+  - firefox
+  - geckodriver
+  - flox
+  - folium
+  - fsspec>=2024.2.0
+  - gcsfs
+  - gdal
+  - gdptools
+  - geocube
+  - geogif
+  - geolinks
+  - geopandas
+  - geopy
+  - geoviews
+  - gifsicle
+  - graphviz
+  - gsw-xarray
+  - h5netcdf
+  - h5py
+  - hologridgen
+  - holoviews>=1.18.3
+  - htop
+  - hvplot
+  - imagecodecs
+  - intake>=2.0
+  - intake-geopandas
+  - intake-stac
+  - intake-xarray
+  - intake-parquet
+  - ipykernel
+  - ipyleaflet
+  - ipywidgets
+  - isort
+  - jinja2
+  - jupyter_bokeh
+  - jupyter-panel-proxy
+  - jupyterlab_code_formatter
+  - jupytext
+  - kerchunk
+  - jq
+  - leafmap
+  - lxml
+  - lz4
+  - mamba
+  - metpy
+  - mpi4py
+  - nbgitpuller
+  - nbstripout
+  - nco
+  - netcdf4
+  - numba
+  - numcodecs
+  - odc-algo
+  - odc-stac
+  - openpyxl
+  - osmnx
+  - owslib
+  - pandas
+  - panel
+  - pangeo-forge-recipes
+  - papermill
+  - param
+  - pip
+  - pint-xarray
+  - planetary-computer
+  - pyarrow
+  - pyarrow-hotfix
+  - pyepsg
+  - pygeohydro
+  - pydaymet
+  - pynhd
+  - py3dep
+  - pygeoogc
+  - pygeoutils
+  - pynco
+  - pyogrio
+  - pyvista
+  - async_retriever
+  - pystac
+  - pystac-client
+  - python-graphviz
+  - python-snappy
+  - pyyaml
+  - python-gist
+  - rasterio
+  - rechunker
+  - requests
+  - rich
+  - rio-cogeo
+  - rioxarray
+  - scikit-image
+  - s3fs
+  - seawater
+  - selenium
+  - siphon
+  - spatialpandas
+  - stackstac
+  - toolz
+  - ujson
+  - unzip
+  - utide
+  - vim
+  - wgrib2
+  - xagg
+  - xarray-spatial
+  - xarray_leaflet
+  - xbitinfo-python
+  - xesmf
+  - xoak
+  - xrviz
+  - xskillscore
+  - zip
+  - zstandard
+  - xmip
+  - intake-esm
+  - xarray-datatree
+  - h5pyd
+  - noaa-coops
+  - kbatch
+  - xstac
+  - zarr
+  - jupyter-book
+  - ghp-import
+  - jsonschema-with-format-nongpl
+  - webcolors
+  - xarrayutils
+  - earthaccess
+  - pip:
+      - pangeo-forge-esgf
+      - streamjoy
+      - webdriver_manager
diff --git a/single-user-d4science-jericocore/start b/single-user-d4science-jericocore/start
new file mode 100644
index 0000000..dd95963
--- /dev/null
+++ b/single-user-d4science-jericocore/start
@@ -0,0 +1,3 @@
+#!/bin/bash -l
+
+exec "$@"