release.yml

name: Release

on:
  push:

jobs:
  build-macos-dist:
    runs-on: macos-12
    outputs: 
      tag_message: ${{env.TAG_MESSAGE}}
    permissions:
      contents: read
      packages: write

    steps:
      - name: Checkout repository
        uses: actions/checkout@v3

      - uses: actions/setup-python@v4
        with:
          python-version: '3.11'

      - name: Set version number
        run: echo VERSION_NUMBER=${GITHUB_REF_NAME:1} >> $GITHUB_ENV
      
      - name: Set tag messsage
        run: | 
          git fetch --tags --force
          echo "TAG_MESSAGE=$(git tag -l --sort=-taggerdate --format='%(contents)' $(git describe --tags $(git branch --show-current) ))" >> $GITHUB_ENV
        
      - name: Build GenomicsDB python distribution
        shell: bash
        working-directory: ${{github.workspace}}/package
        run: ./publish_package_local.sh

      - name: Archive macos python distribution as Artifact
        uses: actions/upload-artifact@v3
        with:
          name: macos-dist-$VERSION_NUMBER
          path: dist

  build-linux-dist:
    runs-on: ubuntu-22.04
    permissions:
      contents: read
      packages: write

    steps:
      - name: Checkout repository
        uses: actions/checkout@v3

      - uses: actions/setup-python@v4
        with:
          python-version: '3.11'
          
      - name: Set version number
        run: |
            echo VERSION_NUMBER=${GITHUB_REF_NAME:1} >> $GITHUB_ENV
            echo USER_ID=$(id -u) >> $GITHUB_ENV
            echo GROUP_ID=$(id -g) >> $GITHUB_ENV
            chmod -R a+w .
            sudo apt-get update -q && sudo apt install -y libcurl4-openssl-dev curl libssl-dev

      - name: Build docker image with GenomicsDB and Python 
        uses: docker/build-push-action@v5
        with:
          file: package/Dockerfile
          tags: genomicsdb:python
          context: package
          build-args: genomicsdb_branch=develop

      - name: Build GenomicsDB linux distribution
        shell: bash
        working-directory: ${{github.workspace}}/package
        run: ./publish_package.sh test-release linux
    
      - name: Archive linux python distribution as Artifact
        uses: actions/upload-artifact@v3
        with:
          name: ubuntu-dist-$VERSION_NUMBER
          path: dist


  #publish:
    #runs-on: ubuntu-22.04
    #needs: [build-macos-dist, build-linux-dist]
    
    #steps:
      #- name: Download macos distribution archive
        #uses: actions/download-artifact@v3
        #with:
          #name: macos-dist-$VERSION_NUMBER

      #- name: Download ubuntu distribution archive
        #uses: actions/download-artifact@v3
        #with:
          #name: ubuntu-dist-$VERSION_NUMBER

      #- name: Release
        #run: twine upload -r testpypi -u "__TOKEN__" -p  {{secrets.TESTPYPI}}

  test:
    #needs: [publish]
    needs: [build-linux-dist]

    runs-on: ubuntu-22.04
    strategy:
      fail-fast: true
      matrix:
        python-version: ["3.11"]

    steps:

    - uses: actions/setup-python@v4
      with:
        python-version: ${{ matrix.python-version }}

    - name: Install Dependencies
      run: |
        python -m pip install --upgrade pip

    - name: Download ubuntu distribution archive
      uses: actions/download-artifact@v3
      with:
        name: ubuntu-dist-$VERSION_NUMBER
    
    - name: Install package
      run: |
        pip install $(find genomicsdb-*-cp311*.whl) || python -m pip install $(find genomicsdb-*-cp311*.whl)
        pip show genomicsdb || python -m pip show genomicsdb
        
         
    - name: Run test
      run: |
        echo test will run here after making sure