[08MQ] Pipeline reproduction (FSL - raw)

[bclenet]

Softwares

FSL

Input data

raw data

Additional context

The current code allows to get the following correlation results (hypothesis 1 to 9) with 40 subjects.

0.5581913554215834
0.5178563211501571
0.5581913554215834
0.5178563211501571
0.6347291690938549
0.36691719409293316
0.6347291690938549
0.36691719409293316
0.041396964350450496

This is insufficient, especially for hypothesis 9.

List of tasks

Please tick the boxes below once the corresponding task is finished. 👍

• 👌 A maintainer of the project approved the issue, by assigning a 🏁status: ready for dev label to it.
• 🌳 Create a branch on your fork to start the reproduction.
• 🌅 Create a file team_{team_id}.py inside the narps_open/pipelines/ directory. You can use a file inside narps_open/pipelines/templates as a template if needed.
• 📥 Create a pull request as soon as you completed the previous task.
• 🧠 Write the code for the pipeline, using Nipype and the file architecture described in docs/pipelines.md.
• 📘 Make sure your code is documented enough.
• 🐍 Make sure your code is explicit and conforms with PEP8.
• 🔬 Create tests for your pipeline. You can use files in tests/pipelines/test_team_* as examples.
• 🔬 Make sure your code passes all the tests you created (see docs/testing.md).

[bclenet]

PR #121 (first step of full pipeline reproduction) just merged to the main branch.

Leading to the following correlation results (hypothesis 1 to 9) with 40 subjects.

0.5581913554215834
0.5178563211501571
0.5581913554215834
0.5178563211501571
0.6347291690938549
0.36691719409293316
0.6347291690938549
0.36691719409293316
0.041396964350450496