This folder contains the data for my Bachelor Thesis which were simulated with gkw with adiabtic electrons approximation of the type S6 nearby the finite heatflux threshold.
Markdown version of data.csv
case | rlt | boxsize | time | timestep | Ns | Nvpar | Nmu | dtim | krhomax | Nmod | Nx | ikx | finit | stepsize_all | evo_start | evo_end | sel_start | sel_end | error_index | converge | mode | backup | path |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S6 | 6.0 | 1x1 | 6000.0 | 10000.0 | 12 | 16 | 6 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 3000, 5000]" | "[2000, 4000, 5500]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns12/Nvpar16/Nmu6 | |||
S6 | 6.0 | 1x1 | 12000.0 | 20000.0 | 12 | 32 | 6 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 3000, 5000, 6000, 8000, 11000]" | "[2000, 4000, 5500, 7000, 10000, 12000]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns12/Nvpar32/Nmu6 | |||
S6 | 6.0 | 1x1 | 6000.0 | 10000.0 | 12 | 48 | 9 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 3000, 5000]" | "[2000, 4000, 5500]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns12/Nvpar48/Nmu9 | |||
S6 | 6.0 | 1x1 | 6000.0 | 10000.0 | 12 | 64 | 9 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns12/Nvpar64/Nmu9 | |||
S6 | 6.0 | 1x1 | 12000.0 | 20000.0 | 16 | 16 | 9 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar16/Nmu9 | |||
S6 | 6.0 | 1x1 | 12000.0 | 20000.0 | 16 | 32 | 9 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar32/Nmu9 | |||
S6 | 6.0 | 1x1 | 6000.0 | 10000.0 | 16 | 48 | 6 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar48/Nmu6 | |||
S6 | 6.0 | 1x1 | 6000.0 | 10000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 1 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar48/Nmu9 | |||
S6 | 6.0 | 1x1 | 7125.0 | 10000.0 | 16 | 48 | 9 | 0.025 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 1 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar48/Nmu9/dtim0.025 | |||
S6 | 6.0 | 1x1 | 6000.0 | 10000.0 | 16 | 48 | 9 | 0.02 | 0.7 | 11 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 1 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar48/Nmu9/krhomax0.70/Nmod11 | |||
S6 | 6.0 | 1x1 | 6000.0 | 10000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 21 | 43 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar48/Nmu9/Nx43 | |||
S6 | 6.0 | 1x1 | 6000.0 | 10000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 21 | 63 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | False | 0 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar48/Nmu9/Nx63 | |||
S6 | 6.0 | 1x1 | 12000.0 | 20000.0 | 16 | 64 | 6 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 1 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar64/Nmu6 | |||
S6 | 6.0 | 1x1 | 12000.0 | 20000.0 | 16 | 64 | 9 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 1 | True | /data/S6_rlt6.0/boxsize1x1/Ns16/Nvpar64/Nmu9 | |||
S6 | 6.0 | 1.5x1.5 | 6000.0 | 10000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 31 | 125 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | [7000] | [8000] | True | 2 | False | /data/S6_rlt6.0/boxsize1.5x1.5/Ns16/Nvpar48/Nmu9 | |
S6 | 6.0 | 2x1 | 18000.0 | 30000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 21 | 165 | 10 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 2 | True | /data/S6_rlt6.0/boxsize2x1/Ns16/Nvpar48/Nmu9 | |||
S6 | 6.0 | 2x2 | 18000.0 | 30000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 41 | 165 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 2 | True | /data/S6_rlt6.0/boxsize2x2/Ns16/Nvpar48/Nmu9 | |||
S6 | 6.0 | 2.5x2.5 | 3402.1 | 5672 | 16 | 48 | 9 | 0.02 | 1.4 | 51 | 207 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | [2000] | [3000] | True | 3 | False | /data/S6_rlt6.0/boxsize2.5x2.5/Ns16/Nvpar48/Nmu9 | |
S6 | 6.0 | 3x1 | 48000.0 | 80000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 21 | 247 | 15 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | "[10000, 28000]" | "[12000, 31000]" | True | 3 | True | /data/S6_rlt6.0/boxsize3x1/Ns16/Nvpar48/Nmu9 | |
S6 | 6.0 | 3x1.5 | 16840.3 | 28068 | 16 | 48 | 9 | 0.02 | 1.4 | 31 | 247 | 10 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | [11000] | [12000] | True | 4 | True | /data/S6_rlt6.0/boxsize3x1.5/Ns16/Nvpar48/Nmu9 | |
S6 | 6.0 | 3x1.5 | 14170.0 | 23618 | 16 | 48 | 9 | 0.02 | 1.4 | 31 | 247 | 10 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | [11000] | [12000] | 23618 | True | 3 | True | /data/S6_rlt6.0/boxsize3x1.5/Ns16/Nvpar48/Nmu9/Broken |
S6 | 6.0 | 3x2.5 | 6000.0 | 10000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 51 | 247 | 6 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | "[10000, 28000]" | "[12000, 31000]" | True | 3 & 4 | True | /data/S6_rlt6.0/boxsize3x2.5/Ns16/Nvpar48/Nmu9 | |
S6 | 6.0 | 3x3 | 7847.0 | 13083.0 | 16 | 48 | 9 | 0.02 | 1.4 | 61 | 247 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | [4000] | [7000] | True | 4 | True | /data/S6_rlt6.0/boxsize3x3/Ns16/Nvpar48/Nmu9 | |
S6 | 6.0 | 3x3 | 3454.8 | 5758.0 | 16 | 48 | 9 | 0.02 | 1.4 | 61 | 247 | 5 | cosine5 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | [2000] | [3000] | "[1840, 1845]" | True | 4 | False | /data/S6_rlt6.0/boxsize3x3/Ns16/Nvpar48/Nmu9/cosine5 |
S6 | 6.0 | 3x3 | 5808.0 | 9680.0 | 16 | 48 | 9 | 0.02 | 1.4 | 61 | 247 | 5 | noise | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | [4000] | [5000] | "[1840, 1842]" | True | 3 | False | /data/S6_rlt6.0/boxsize3x3/Ns16/Nvpar48/Nmu9/noise |
S6 | 6.0 | 3x5 | 4769.0 | 7958.0 | 16 | 48 | 9 | 0.02 | 1.4 | 101 | 247 | 3 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 4 | True | /data/S6_rlt6.0/boxsize3x5/Ns16/Nvpar48/Nmu9 | |||
S6 | 6.0 | 4x1 | 30000.0 | 50000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 21 | 329 | 20 | cosine2 | 1000 | "[24000, 26000]" | "[25500, 28000]" | 47084 | True | 4 | True | /data/S6_rlt6.0/boxsize4x1/Ns16/Nvpar48/Nmu9 | ||
S6 | 6.2 | 2x2 | 6000.0 | 10000.0 | 16 | 64 | 9 | 0.02 | 1.4 | 41 | 165 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | True | 2 | True | /data/S6_rlt6.2/boxsize2x2/Ns16/Nvpar64/Nmu9 | |||
S6 | 6.2 | 3x3 | 14682.7 | 24475.0 | 16 | 48 | 9 | 0.02 | 1.4 | 61 | 247 | 5 | cosine2 | 2000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | "[14473,16132]" | True | 3 | True | /data/S6_rlt6.2/boxsize3x3/Ns16/Nvpar48/Nmu9 | ||
S6 | 6.3 | 1x1 | 6000.0 | 10000.0 | 16 | 64 | 9 | 0.02 | 1.4 | 21 | 83 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | False | 0 | True | /data/S6_rlt6.3/boxsize1x1/Ns16/Nvpar64/Nmu9 | |||
S6 | 6.4 | 3x3 | 12000.0 | 20000.0 | 16 | 48 | 9 | 0.02 | 1.4 | 61 | 247 | 5 | cosine2 | 1000 | "[500, 1500, 4000]" | "[1000, 2000, 5500]" | False | 0 | True | /data/S6_rlt6.4/boxsize3x3/Ns16/Nvpar48/Nmu9 |
- (*) marks files that are not included on GitHub and are only included on the NAS of TPV in Bayreuth
- (#) marks files that can be deleted to free space
- (+) marks files with additional diagnostics
The data is sorted by changed parameters in specific Folders.
data
│
├── S6_rlt6.0
│ │
│ ├── boxsize1x1
│ │ │
│ │ ├── Ns12 (#)
│ │ │ │
│ │ │ ├── Nvpar16
│ │ │ │ └── Nmu6
│ │ │ │
│ │ │ ├── Nvpar32
│ │ │ │ └── Nmu6
│ │ │ │
│ │ │ ├── Nvpar48
│ │ │ │ └── Nmu9
│ │ │ │
│ │ │ └── Nvpar64
│ │ │ └── Nmu9
│ │ │
│ │ └── Ns16
│ │ │
│ │ ├── Nvpar16 (#)
│ │ │ └── Nmu9
│ │ │
│ │ ├── Nvpar32 (#)
│ │ │ └── Nmu9
│ │ │
│ │ ├── Nvpar48
│ │ │ ├── Nmu6 (#)
│ │ │ │
│ │ │ └── Nmu9
│ │ │ ├── dtim0.025
│ │ │ │
│ │ │ ├── krhomax0.70 (#)
│ │ │ │ └── Nmod11
│ │ │ │
│ │ │ ├── Nx43 (#)
│ │ │ └── Nx63 (#)
│ │ │
│ │ └── Nvpar64
│ │ ├── Nmu6
│ │ └── Nmu9
│ │
│ ├── boxsize1.5x1.5
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │
│ ├── boxsize2x1
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │
│ ├── boxsize2x2
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │
│ ├── boxsize2.5x2.5
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │
│ ├── boxsize3x1
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │
│ ├── boxsize3x1.5
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │ └── Broken (#)
│ │
│ ├── boxsize3x2.5
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │
│ ├── boxsize3x3
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │ ├── cosine5 (+)
│ │ └── noise (+)
│ │
│ ├── boxsize3x5
│ │ └── Ns16
│ │ └── Nvpar48
│ │ └── Nmu9
│ │
│ └── boxsize4x1
│ └── Ns16
│ └── Nvpar48
│ └── Nmu9
│
├── S6_rlt6.2
│ │
│ ├── boxsize2x2
│ │ └── Ns16
│ │ └── Nvpar64
│ │ └── Nmu9
│ │
│ └── boxsize3x3
│ └── Ns16
│ └── Nvpar48
│ └── Nmu9
│
├── S6_rlt6.3
│ └── boxsize1x1
│ └── Ns16
│ └── Nvpar64
│ └── Nmu9
│
└── S6_rlt6.4
└── boxsize3x3
└── Ns16
└── Nvpar48
└── Nmu9
-
FDS
: restart file needed to restart run with gkw from current timestep (*) -
FDS.dat
: database file ofFDS
with current status of the simulation after run with gkw -
input.dat
: input database for simultaion with all parameters -
input.out
: input output file (#) -
kx_connect.dat
: parallel boundary connections database -
output.dat
: output database of gkw -
par.dat
: curvature and Coriolis functions database -
perfloop.dat
: (no description found) -
perform.dat
: performance database -
status.txt
: status file of specific run generated with python script\python\monitor_job.py
(not in every folder included)(#) -
data.h5
: trimmed down version ofgkwdata.h5
for lower space consumption generated with shell script\hdf5\hdf5_extract.sh
with added evaluated data (*), additional diagnostics marked with (+)Containing
data.h5 │ ├── diagnostic │ │ │ ├── diagnos_fields │ │ └── phi │ │ │ ├── diagnos_fluxes │ │ └── eflux_species01 │ │ │ ├── diagnos_grid │ │ └── lxn │ │ │ ├── diagnos_moments │ │ └── xs_kyzero_dens (+), xs_kyzero_ene_par (+), xs_kyzero_ene_perp, (+) │ │ │ └── diagnos_growth_freq │ └── time │ ├── grid │ └── xphi │ └── evaluation └── derivative_stepsize, second_derivative_phi, zonalflow_potential, shearing_rate, shearing_rate_maximum, 'derivative_dens' (+), 'second_derivative_dens' (+), 'derivative_energy_perp' (+), 'second_derivative_energy_perp' (+), 'derivative_energy_par' (+), 'second_derivative_energy_par' (+), 'derivative_zonalflow_potential' (+), 'derivative_zonalflow_potential' (+)
-
gkwdata.h5
: raw data of the simulation (*) (#), additional diagnostics marked with (+)Containing
gkwdata.h5 │ ├── diagnostic │ │ │ ├── diagnos_fields │ │ └── kxspec, kxvort, kyspec, kyvort, phi, spc │ │ │ ├── diagnos_fluxes │ │ └── EFlesr0001, eflux_species01, eflux_spectra, eflux_sup, eflux_xspec, flmgr01, pflux_species01, │ │ pflux_spectra, pflux_sup, pflux_xspec, vflux_species01, vflux_spectra, vflux_xspec │ │ │ ├── diagnos_grid │ │ └── intmu, intvp, lxn, lyn, mode_label, mphi, mphiw3, mrad_G, mrad_l, sgrid │ │ │ ├── diagnos_growth_freq │ │ └── frequencies, frequencies_all_modes, growth, growth_rates_all_modes, time │ │ │ ├── diagnos_mode_struct │ │ └── parallel │ │ │ ├── diagnos_moments │ │ └── den01, den_spectra, ene01, ene_spectra, xs_kyzero_dens (+), xs_kyzero_ene_par (+), xs_kyzero_ene_perp, (+) │ │ │ └── diagnos_rad │ └── prof_back │ ├── geom │ └── Bref, Bt_frac, D_eps, D_s, D_zeta, E_eps_s, E_eps_zeta, E_zeta_s, F, G, H_eps, H_s, H_zeta, I_eps, I_s, │ I_zeta, J, Jacobian, K, NS, R, R0, Rref, Z, beta_eq, betaprime_eq, bmax, bmin, bn, eps, g_eps_eps, │ g_eps_s, g_eps_zeta, g_s_s, g_zeta_s, g_zeta_zeta, jfunh, jfunl, krnorm, kthnorm, lfun, poloidal_angle, │ q, s_grid, shat │ ├── grid │ └── file_count, krho, krho_extended, krloc, kxrh, kzeta, time_fine, vperp, vpgr, xgr, xphi, yphi │ ├── input │ │ │ ├── collisions │ │ └── coll_freq, cons_type, en_scatter, ene_conservation, freq_override, friction_coll, lorentz, mass_conserve, │ │ mom_conservation, nref, pitch_angle, rref, selfcollcon, tref, zeff │ │ │ ├── control │ │ └── auto_restart, collisions, disp_par, disp_vp, disp_x, disp_y, dt_min, dtim, fac_dtim_est, flux_tube, │ │ fluxtol, gamatol, ifluxtol, io_format, io_legacy, io_testdata, iperform_set, irun, laverage_dist_over_time, │ │ lflapv, lpar_vel_nl, lrestart_new_grid, ltrapping_arakawa, lverbose, matrix_format, max_gr, max_sec, │ │ max_seconds, meth, method, min_gr, naverage, ncqtol, ndump_ts, neoclassics, nl_dtim_est, nlapar, nlbpar, │ │ nlphi, non_linear, normalize_per_toroidal_mode, normalized, ntime, order_of_the_radial_scheme, │ │ order_of_the_scheme, order_of_the_zf_scheme, parallel_boundary_conditions, radial_boundary_conditions, │ │ read_file, restart_file_version, shift_metric, silent, spectral_radius, testing, uniform_mu_grid, vp_trap, │ │ zonal_adiabatic │ │ │ ├── diagnostic │ │ └── apa3d, apc3d, bpa3d, bpc3d, cross_phase_timetrace, den3d, ene3d, field_fsa_kyzero, flux3d, imod_corr, │ │ imod_field, kykxs_apar, kykxs_bpar, kykxs_j0_moments, kykxs_j1_moments, kykxs_moments, kykxs_phi, │ │ lamplitudes, lcalc_corr, lcalc_energetics, lcalc_fluxes, lcalc_jdote, lcalc_jdote_fs, │ │ lcalc_kinenergy_trappas, lcalc_stresses, lcalc_tot_energy, lcalc_zfshear, lcalc_zonal_evo, │ │ lfinal_output, lfinvel, lfluxes_detail, lfluxes_em_spectra, lfluxes_spectra, lfluxes_vspace, │ │ lfluxes_vspace_bpar, lfluxes_vspace_em, lfluxes_vspace_phi, lfrequencies, lgrowth_rates, lisl_follow, │ │ lmode_energy, lmpi_broken_io, lnonlin_transfer,lnonlin_transfer_fsa, lparallel_output, │ │ lphi_diagnostics, lrad_entropy, lrad_field, lrad_kpar, lrad_moment, lrad_tint, lradial_entropy, │ │ lradial_profile, lrotate_parallel, lvelspace_output, lwrite_output1, nflush_ts, │ │ nmodepoints, nonlin_transfer_interval, npointsvel, out3d_interval, parallel_output_timestamps, phi3d, │ │ psi_velspace, screen_output, spc3d, xs_kyzero_current, xs_kyzero_current2, xs_kyzero_dens, xs_kyzero_ene, │ │ xs_kyzero_ene_par, xs_kyzero_ene_perp, xs_kyzero_phi_ga_deltaf, xs_kyzero_phi_ga_fm, xs_phi, xy_apar, │ │ xy_bpar, xy_current, xy_current2, xy_dens, xy_estep, xy_fluxes, xy_fluxes_bi, xy_fluxes_bpar, │ │ xy_fluxes_em, xy_fluxes_fsa, xy_fluxes_k, xy_fluxes_p, xy_fluxes_v, xy_phi, xy_slice_ipar, xy_spec, │ │ xy_temp, xy_vort, zeta_velspace, zevo_detail, zevo_xy_spec, zonal_scale_3d │ │ │ ├── eiv_integration │ │ └── freq, growthrate, mat_vec_routine, max_iterations, nr_column_vec, number_eigenvalues, tolerance, │ │ type_extraction, type_solver, which_eigenvalues │ │ │ ├── finite_rho_parallel │ │ └── lflux_rhostar, lnonlinear_rhostar, ltrapdf_rhostar, lvdgrad_phi_fm_rhostar, lvdgradf_rhostar, │ │ lve_grad_fm_rhostar, s_average │ │ │ ├── geom │ │ └── N_shape, R0_loc, Zmil, beta_rota_miller, beta_rota_miller_type, c, c_prime, curv_effect, dRmil, dZmil, │ │ delta, eps, eps_type, eqfile, geom_type, gradp, gradp_type, kappa, prof_type, q, qprof_coef, s, s_prime, │ │ sdelta, shat, signB, signJ, skappa, square, ssquare │ │ │ ├── grid │ │ └── lx, mumax, n_mu_grid, n_procs_mu, n_procs_s, n_procs_sp, n_procs_vpar, n_procs_x, n_s_grid, n_trapped, │ │ n_vpar_grid, n_x_grid, nmod, non_blocking_vpar, nperiod, number_of_species, nx, psih, psil, vpmax │ │ │ ├── gyroaverage │ │ └── blending_order, consistent_long_wave, gyro_average_electrons, gyro_average_ions, mk_gyro_av_hermitian, │ │ n_gav_bound_ex, n_points_ga, orb_polarize, parallel_mod, use_conj │ │ │ ├── header │ │ └── compiler, gkw_executable_name, gkw_version, number_of_processors, timestamp │ │ │ ├── krook │ │ └── bwidth, gamkpre, gammab, gammak, krook_option, nlbound, nlkrook │ │ │ ├── linear_term_switches │ │ └── apply_on_imod, idisp, lampere, lbpar, lg2f_correction, lneo_equil, lneo_rad, lneo_trap, lneoclassical, │ │ lneorotsource, lpoisson, lpoisson_zf, ltrapdf, lvd_grad_phi_fm, lvdgradf, lve_grad_fm, lvpar_grad_df, │ │ lvpgrphi, neo_equil_parse_sp_seq │ │ │ ├── mode │ │ └── chin, ikxspace, kr_type, krhomax, krrho, kthrho, mode_box, n_spacing, no_drive_of, no_transfer_from, │ │ no_transfer_to, rkxspace │ │ │ ├── rotation │ │ └── cf_drift, cf_qncheck, cf_trap, cf_upphi, cf_upsrc, coriolis, shear_profile, shear_rate, t_shear_begin, │ │ toroidal_shear, vcor │ │ │ ├── source_time │ │ └── dsfr, gauss_source_median, gauss_source_stdev, mod_freq, source_profile, source_time_ampl, │ │ source_wave_number │ │ │ ├── spcgeneral │ │ └── Ls, adiabatic_electrons, amp_imod, amp_imod_imag, amp_init, amp_zon, amp_zon_imag, beta, beta_ref, │ │ beta_type, betaprime_ref, betaprime_type, energetic_particles, finit, finit_imod, icrh_params, │ │ imod_init, init_coef, isl_mode, isl_rot_freq, isl_shear, lfinit_radial_dirichlet, mode_persist, │ │ n_quench, psi_0, quench_modes, quench_switch, rhostar, tear_zero_epar, tearingmode, tm_start, │ │ vpar_mean, wstar │ │ │ ├── species01 │ │ └── background, dens, dens_prof_coef, dens_prof_type, mass, param, rln, rlt, rlt_gauss, temp, temp_prof_coef, │ │ temp_prof_type, uprim, z │ │ │ └── species02 │ └── background, dens, dens_prof_coef, dens_prof_type, mass, param, rln, rlt, rlt_gauss, temp, temp_prof_coef, │ temp_prof_type, uprim, z │ └── restart └── dtim, nt_complete, nt_remain, time_complete