From d79c27763b5f7db89ba93d8c76182627297b6cdb Mon Sep 17 00:00:00 2001
From: boasvdp <boasvdp@gmail.com>
Date: Wed, 18 Sep 2024 12:16:35 +0200
Subject: [PATCH] chore: add debug env

---
 run_pipeline.sh | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/run_pipeline.sh b/run_pipeline.sh
index ea7c910..910b668 100755
--- a/run_pipeline.sh
+++ b/run_pipeline.sh
@@ -121,6 +121,10 @@ fi
 
 set +euo pipefail
 
+echo "--start env--"
+env
+echo "--end--"
+
 SEQ_KEYS=
 SEQ_ENV=`env | grep irods_input_sequencing`
 for SEQ_AVU in ${SEQ_ENV}