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The SBML file is valid with the online validator. However, with cobrapy version 0.26.2 I get this error when I try to read the eciML1515.xml file with cobra.io.read_sbml_model:
This error comes from the reaction with ID R_protein__32__pseudoreaction on line 61811 of the xml file. Changing this ID to e.g. R_protein_pseudoreaction resolves the issue.
The text was updated successfully, but these errors were encountered:
The SBML file is valid with the online validator. However, with cobrapy version 0.26.2 I get this error when I try to read the eciML1515.xml file with
cobra.io.read_sbml_model
:This error comes from the reaction with ID R_protein__32__pseudoreaction on line 61811 of the xml file. Changing this ID to e.g. R_protein_pseudoreaction resolves the issue.
The text was updated successfully, but these errors were encountered: