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Add new cell line experiments #200

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DongdongdongW opened this issue May 15, 2023 · 0 comments
Open

Add new cell line experiments #200

DongdongdongW opened this issue May 15, 2023 · 0 comments

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@DongdongdongW
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DongdongdongW commented May 15, 2023

There are 20 datasets to review, and annotations can begin when the review is successful:

  1. PXD029362 (No needed, this is the same reanalysis we have done in the past)
  2. PXD029360 (No needed, this is the same reanalysis we have done in the past)
  3. PXD015270 (OK)
  4. PXD033515 (Looks good for DIA but variants can't be search with DIA)
  5. PXD041683 (No, mass tolerance to high 0.6 DA at fragment level, but for variant search)
  6. PXD039063 (No, mass tolerance to high 0.6 DA at fragment level, but for variant search)
  7. PXD038892 (No, use knockout)
  8. PXD026581 (OK, perfect)
  9. PXD031162 (OK)
  10. PXD036951 (No for now, has phospho, no good for variant search)
  11. PXD037587 (No, good for annotations for inmunopeptidomics search, no for variants)
  12. PXD037651 (OK, perfect)
  13. PXD037791 (NO, is plasma, good for plasma analysis)
  14. PXD036826 (Good for phospho-proteomics, DIA and phospho, no good for swath)
  15. PXD036467 (OK)
  16. PXD036298 (OK)
  17. PXD032899 (OK)
  18. PXD032329 (NO, is PRM no Tandem)
  19. PXD032264 (OK, perfect)
  20. PXD031907 (OK)
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