Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Clarify BBBC036 #99

Open
bethac07 opened this issue Aug 17, 2022 · 0 comments
Open

Clarify BBBC036 #99

bethac07 opened this issue Aug 17, 2022 · 0 comments

Comments

@bethac07
Copy link
Contributor

BBBC036 is a subsample of BBBC047; specifically, a 54 plate subsample (see below).

Right now, the link out points to a host of the full 047 dataset, and we don't specify how to subsample it. The main screen count of fields also I think is for the full 047 dataset (I checked the total count of images in the 036 folder below, and it's 622080, which works out to 124416 fields, which is the exact number you'd expect for 54 plates/ 384 wells per plate/ 6 fields per well). We should clarify both.

-bash:login03:~ 1011 $ aws s3 ls s3://cytodata/datasets/CDRPBIO-BBBC036-Bray/images/CDRPBIO-BBBC036-Bray/
                           PRE 24277/
                           PRE 24278/
                           PRE 24279/
                           PRE 24280/
                           PRE 24293/
                           PRE 24294/
                           PRE 24295/
                           PRE 24296/
                           PRE 24297/
                           PRE 24300/
                           PRE 24301/
                           PRE 24302/
                           PRE 24303/
                           PRE 24304/
                           PRE 24305/
                           PRE 24306/
                           PRE 24307/
                           PRE 24308/
                           PRE 24309/
                           PRE 24310/
                           PRE 24311/
                           PRE 24312/
                           PRE 24313/
                           PRE 24319/
                           PRE 24320/
                           PRE 24321/
                           PRE 24352/
                           PRE 24357/
                           PRE 25937/
                           PRE 25938/
                           PRE 25939/
                           PRE 25943/
                           PRE 25944/
                           PRE 25945/
                           PRE 25949/
                           PRE 25955/
                           PRE 25962/
                           PRE 25965/
                           PRE 25966/
                           PRE 25967/
                           PRE 25968/
                           PRE 25983/
                           PRE 25984/
                           PRE 25985/
                           PRE 25986/
                           PRE 25987/
                           PRE 25988/
                           PRE 25989/
                           PRE 25990/
                           PRE 25992/
                           PRE 26224/
                           PRE 26232/
                           PRE 26239/
                           PRE 26247/
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant