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Issues list

segfault
#144 opened Feb 15, 2024 by VICTO160
minimap2 alignment step fails because of samtools sort question Further information is requested
#145 opened Feb 16, 2024 by trum994
error pulling singularity image
#175 opened Apr 23, 2024 by selmapichot
Running on AWS Batch question Further information is requested
#204 opened Aug 1, 2024 by k1sauce
Running on Kubernetes/Seqera question Further information is requested
#213 opened Sep 3, 2024 by gezthxbio
Valid SNPIDs missing in vcf file
#221 opened Sep 18, 2024 by matomol
losing reads from input bam
#225 opened Oct 21, 2024 by flokraft85
longphase: command not found
#234 opened Jan 3, 2025 by f-ferraro
ProTip! Exclude everything labeled bug with -label:bug.