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(I've got a couple of small suggestions that would help me interpret and diagnose how guide-counter is running. I'll post them here as separate issues, please feel free to ignore/answer very slowly.)
When I run guide-counter with offset detection and --offset-min-fraction, the terminal log displays how many counts it finds at each position:
INFO In "/path/to/my.fastq.gz" examined 100000 reads for guide start position and matched 87811 (0.8781).
INFO my.fastq.gz read offsets: 0->86047, 1->11, 2->7, 3->11, 4->11, 5->8, 6->5, (etc, until position 58)
Would it be possible to add/modify a log entry that states which offsets passed the threshold? e.g.:
INFO my.fastq.gz X of Y possible read offsets chosen: 0, M, N
The text was updated successfully, but these errors were encountered:
(I've got a couple of small suggestions that would help me interpret and diagnose how
guide-counter
is running. I'll post them here as separate issues, please feel free to ignore/answer very slowly.)When I run
guide-counter
with offset detection and--offset-min-fraction
, the terminal log displays how many counts it finds at each position:Would it be possible to add/modify a log entry that states which offsets passed the threshold? e.g.:
INFO my.fastq.gz X of Y possible read offsets chosen: 0, M, N
The text was updated successfully, but these errors were encountered: