diff --git a/workflows/amplicon-mgnify/mgnify-amplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction-tests.yml b/workflows/amplicon-mgnify/mgnify-amplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction-tests.yml
index 4ba41454fb..3feb2fd331 100755
--- a/workflows/amplicon-mgnify/mgnify-amplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction-tests.yml
+++ b/workflows/amplicon-mgnify/mgnify-amplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction-tests.yml
@@ -13,6 +13,9 @@
     Clan information file:
       class: File
       location: "ftp://ftp.ebi.ac.uk/pub/databases/metagenomics/pipeline-5.0/ref-dbs/rfam_models/ribosomal_models/ribo.claninfo"
+    CM:
+      class: File
+      location: "ftp://ftp.ebi.ac.uk/pub/databases/metagenomics/pipeline-5.0/ref-dbs/rfam_models/ribosomal_models/ribo.cm"
   outputs:
     LSU_SSU_BED:
       element_tests:
diff --git a/workflows/amplicon-mgnify/mgnify-amplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction.ga b/workflows/amplicon-mgnify/mgnify-amplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction.ga
index 65464b04af..eb6dbbc0ba 100644
--- a/workflows/amplicon-mgnify/mgnify-amplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction.ga
+++ b/workflows/amplicon-mgnify/mgnify-amplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction.ga
@@ -24,7 +24,6 @@
     "format-version": "0.1",
     "license": "Apache-2.0",
     "name": "MGnify's amplicon pipeline v5.0 - rRNA prediction",
-    "release": "0.1",
     "report": {
         "markdown": "\n# Workflow Execution Report\n\n## Workflow Inputs\n```galaxy\ninvocation_inputs()\n```\n\n## Workflow Outputs\n```galaxy\ninvocation_outputs()\n```\n\n## Workflow\n```galaxy\nworkflow_display()\n```\n"
     },
@@ -85,16 +84,51 @@
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-            "content_id": "toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmsearch/1.1.4+galaxy0",
+            "content_id": null,
             "errors": null,
             "id": 2,
+            "input_connections": {},
+            "inputs": [
+                {
+                    "description": "",
+                    "name": "CM"
+                }
+            ],
+            "label": "CM",
+            "name": "Input dataset",
+            "outputs": [],
+            "position": {
+                "left": 32.10241852349255,
+                "top": 712.5722539597297
+            },
+            "tool_id": null,
+            "tool_state": "{\"optional\": false, \"tag\": null}",
+            "tool_version": null,
+            "type": "data_input",
+            "uuid": "68aa4d05-d7be-4c9a-9ea7-4cc722877e2e",
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+            "workflow_outputs": []
+        },
+        "3": {
+            "annotation": "",
+            "content_id": "toolshed.g2.bx.psu.edu/repos/bgruening/infernal/infernal_cmsearch/1.1.4+galaxy0",
+            "errors": null,
+            "id": 3,
             "input_connections": {
+                "cm_opts|cmfile": {
+                    "id": 2,
+                    "output_name": "output"
+                },
                 "seqdb": {
                     "id": 0,
                     "output_name": "output"
                 }
             },
             "inputs": [
+                {
+                    "description": "runtime parameter for tool cmsearch",
+                    "name": "cm_opts"
+                },
                 {
                     "description": "runtime parameter for tool cmsearch",
                     "name": "seqdb"
@@ -109,8 +143,8 @@
                 }
             ],
             "position": {
-                "left": 353.04235240350044,
-                "top": 587.2717065545219
+                "left": 353.0422947739334,
+                "top": 587.264409674583
             },
             "post_job_actions": {
                 "HideDatasetActionoutfile": {
@@ -126,21 +160,21 @@
                 "owner": "bgruening",
                 "tool_shed": "toolshed.g2.bx.psu.edu"
             },
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+            "tool_state": "{\"A\": false, \"Z\": \"1000.0\", \"acceleration_huristics\": {\"acceleration_huristics_selector\": \"--hmmonly\", \"__current_case__\": 5}, \"acyk\": false, \"anytrunc\": false, \"bottomonly\": false, \"cm_opts\": {\"cm_opts_selector\": \"histdb\", \"__current_case__\": 1, \"cmfile\": {\"__class__\": \"RuntimeValue\"}}, \"cyk\": false, \"g\": false, \"inclusion_thresholds_opts\": {\"inclusion_thresholds_selector\": \"\", \"__current_case__\": 0}, \"model_thresholds\": {\"cut_ga\": false, \"cut_nc\": false, \"cut_tc\": false}, \"mxsize\": \"128.0\", \"noali\": true, \"nonull3\": false, \"notrunc\": false, \"reporting_thresholds_opts\": {\"reporting_thresholds_selector\": \"\", \"__current_case__\": 0}, \"seqdb\": {\"__class__\": \"RuntimeValue\"}, \"smxsize\": \"128.0\", \"toponly\": false, \"verbose\": false, \"__page__\": null, \"__rerun_remap_job_id__\": null}",
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@@ -172,18 +206,18 @@
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                 }
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@@ -221,14 +255,14 @@
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@@ -298,14 +332,14 @@
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@@ -350,14 +384,14 @@
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@@ -402,14 +436,14 @@
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@@ -454,14 +488,14 @@
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@@ -506,18 +540,18 @@
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@@ -562,18 +596,18 @@
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@@ -696,18 +730,18 @@
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@@ -753,14 +787,14 @@
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@@ -798,14 +832,14 @@
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@@ -843,14 +877,14 @@
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@@ -900,14 +934,14 @@
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@@ -957,18 +991,18 @@
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@@ -1011,18 +1045,18 @@
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@@ -1065,14 +1099,14 @@
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@@ -1118,14 +1152,14 @@
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@@ -1171,14 +1205,14 @@
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\ No newline at end of file