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4_basic_IGV_session.md

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What is IGV?

IGV is a frequently used tool to visualize genomic data. You can download it here: https://software.broadinstitute.org/software/igv/ Here are some useful track files:

  • For human genome build 37: /gscmnt/gc2802/halllab/ccdg_resources/igv_091316/tracks/
  • For human genome build 38: /gscmnt/gc2802/halllab/ccdg_resources/genomes/human/GRCh38DH/annotations/ira_b38_061117/

If you have any questions about how to use IGV, ask Ira (or any lab member) for help