From 0c9cf543d56dd396e0f79f5a4c33b550c28e0e09 Mon Sep 17 00:00:00 2001 From: Jonas Fuchs <78491186+jonas-fuchs@users.noreply.github.com> Date: Mon, 17 Jun 2024 13:13:36 +0200 Subject: [PATCH] Update usage.md --- docs/usage.md | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/docs/usage.md b/docs/usage.md index 2d7a9ed..50c6fe0 100644 --- a/docs/usage.md +++ b/docs/usage.md @@ -110,10 +110,17 @@ Let's assume you have Then with +Linux: ```shell VARVAMP_CONFIG=custom_config.py varvamp qpcr input_alignment.fasta my_results ``` +Windows: +```shell +set "VARVAMP_CONFIG=custom_config.py" +varvamp qpcr input_alignment.fasta my_results +``` + you run the command with the parameter change applied. If, as another example, you have several custom config files, each optimized for a specific use case, stored in a folder `/home/me/my varvamp configs`, you might want to run: