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reactions.yaml
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- id: 2H3MOAOX
name: 2H3MOAOX
genes: MA3790
equation: 23dhmb[c] + nadp[c] <=> 2h3moa[c] + h_c[c] + nadph[c]
- id: 2MBCOAS
name: 2MBCOAS
genes: MA2912
equation: 2mbr[c] + atp[c] + coa[c] => 2mbcoa[c] + amp[c] + ppi[c]
- id: 2MOPRED
name: 2MOPRED
genes: MA2860
equation: 2mop[c] + h2o_c[c] + nad[c] => (2) h_c[c] + mmal[c] + nadh[c]
- id: 2OBUTHE2THPPTRX
name: 2OBUTHE2THPPTRX
genes: MA1354 and MA1958
equation: 2obut[c] + he2thpp[c] <=> 2ahbut[c] + thmpp[c]
- id: 2PLS
name: 2PLS
equation: gtp[c] + lac_L[c] => 2plac_L[c] + gdp[c] + h_c[c]
- id: 4ABZt2r
name: 4ABZt2r
equation: 4abz_e[e] + h_e[e] <=> 4abz_c[c] + h_c[c]
- id: 4ASD
name: 4ASD
equation: 4as[c] => 4das[c] + h2o_c[c]
- id: 4DHSD
name: 4DHSD
equation: 4adhs[c] + (2) h_c[c] + nadh[c] => 4as[c] + nad[c]
- id: 4DHSS
name: 4DHSS
equation: 4adhq[c] => 4adhs[c] + h2o_c[c] + h_c[c]
- id: 5HBCOX
name: 5HBCOX
equation: (2) 5hbc_red[c] + (2) h_c[c] => (2) 5hbc[c] + h2_c[c]
- id: 5HBCR
name: 5HBCR
genes: MA0150 or MA0849 or MA4360
equation: 5hbc[c] + atp[c] + fdred[c] + h2o_c[c] => 5hbc_red[c] + adp[c] + fdox[c]
+ h_c[c] + pi_c[c]
- id: 5HBZIDS
name: 5HBZIDS
equation: ribflv_c[c] => 5hbzid[c] + unknown_rbfdeg_c[c]
- id: 7MHS
name: 7MHS
equation: 7ohp[c] + cys_L_c[c] + h_c[c] + nadh[c] => 7mhp[c] + nad[c] + ser_L[c]
- id: 7MHTS
name: 7MHTS
equation: 7mhp[c] + atp[c] + thr_L[c] => 7mht[c] + adp[c] + h_c[c] + pi_c[c]
- id: ABTA
name: ABTA
genes: MA2859
equation: 4abut[c] + akg[c] <=> glu_L_c[c] + sucsal[c]
- id: ACACT1
name: ACACT1
genes: MA4042
equation: (2) accoa[c] <=> aacoa[c] + coa[c]
- id: ACBIPGT
name: ACBIPGT
genes: MA0938
equation: adocbip[c] + gtp[c] + h_c[c] => agdpcbi[c] + ppi[c]
- id: ACCOAL2r
name: ACCOAL2r
genes: MA3168 and MA3602
equation: atp[c] + coa[c] + ppa[c] <=> adp[c] + pi_c[c] + ppcoa[c]
- id: ACGK
name: ACGK
genes: MA4515
equation: acglu[c] + atp[c] <=> acg5p[c] + adp[c]
- id: ACGS
name: ACGS
genes: MA3564 or MA4339
equation: accoa[c] + glu_L_c[c] => acglu[c] + coa[c] + h_c[c]
- id: ACKr
name: ACKr
genes: MA3606
equation: ac_c[c] + atp[c] <=> actp[c] + adp[c]
- id: ACLDC
name: ACLDC
genes: MA3744
equation: alac_S_c[c] + h_c[c] => actn_R_c[c] + co2_c[c]
- id: ACLS
name: ACLS
genes: (MA1354 or MA1958 or MA3792) and (MA3791 or MA3854)
equation: h_c[c] + (2) pyr_c[c] => alac_S_c[c] + co2_c[c]
- id: ACNPLYS
name: ACNPLYS
genes: MA3767
equation: acnam[c] + pi_c[c] <=> acmana[c] + h2o_c[c] + pep[c]
- id: ACONMT
name: ACONMT
genes: MA1801
equation: acon_T[c] + amet[c] => aconm[c] + ahcys[c]
- id: ACONTa
name: ACONTa
genes: MA0250
equation: cit_c[c] <=> acon_C[c] + h2o_c[c]
- id: ACONTb
name: ACONTb
genes: MA0250
equation: icit[c] <=> acon_C[c] + h2o_c[c]
- id: ACOTA
name: ACOTA
genes: MA0119
equation: acg5sa[c] + glu_L_c[c] <=> acorn[c] + akg[c]
- id: ACP1_FMN
name: ACP1(FMN)
genes: MA2649
equation: fmn[c] + h2o_c[c] => pi_c[c] + ribflv_c[c]
- id: ACSERHS
name: ACSERHS
genes: MA2715 or MA2720
equation: acser[c] + trdrd[c] + tsul[c] => ac_c[c] + cys_L_c[c] + h_c[c] + so3[c]
+ trdox[c]
- id: ACTNt2r
name: ACTNt2r
equation: actn_R_e[e] + h_e[e] <=> actn_R_c[c] + h_c[c]
- id: ACYP
name: ACYP
genes: MA3367
equation: 13dpg[c] + h2o_c[c] => 3pg[c] + h_c[c] + pi_c[c]
- id: ACYP_2
name: ACYP_2
genes: MA3367
equation: actp[c] + h2o_c[c] => ac_c[c] + h_c[c] + pi_c[c]
- id: ACt3r
name: ACt3r
genes: MA4008
equation: ac_e[e] + hco3_c[c] <=> ac_c[c] + hco3_e[e]
- id: ADCBHBIR
name: ADCBHBIR
equation: adocblhbi[c] + h2o_c[c] => 5hbc_red[c] + adn[c] + h_c[c]
- id: ADCL2
name: ADCL2
equation: 4das[c] => 4abz_c[c] + h2o_c[c] + h_c[c]
- id: ADCPS1
name: ADCPS1
genes: MA0941
equation: adcobhex[c] + appl[c] + atp[c] => adocbi[c] + adp[c] + h_c[c] + pi_c[c]
- id: ADCPS2
name: ADCPS2
genes: MA0941
equation: adcobhex[c] + applp[c] + atp[c] => adocbip[c] + adp[c] + h_c[c] + pi_c[c]
- id: ADCYRS
name: ADCYRS
genes: MA3250
equation: adcobdam[c] + (4) atp[c] + (4) gln_L[c] + (4) h2o_c[c] => adcobhex[c]
+ (4) adp[c] + (4) glu_L_c[c] + (4) h_c[c] + (4) pi_c[c]
- id: ADD
name: ADD
genes: MA2310
equation: ade[c] + h2o_c[c] + h_c[c] => hxan[c] + nh4_c[c]
- id: ADK1
name: ADK1
genes: MA1096
equation: amp[c] + atp[c] <=> (2) adp[c]
- id: ADK2
name: ADK2
genes: MA1096
equation: amp[c] + pppi[c] <=> adp[c] + ppi[c]
- id: ADK3
name: ADK3
genes: MA1096
equation: amp[c] + gtp[c] <=> adp[c] + gdp[c]
- id: ADK4
name: ADK4
genes: MA1096
equation: amp[c] + itp[c] <=> adp[c] + idp[c]
- id: ADKd
name: ADKd
genes: MA1096
equation: damp[c] + datp[c] <=> (2) dadp[c]
- id: ADNCYC
name: ADNCYC
genes: MA4044
equation: atp[c] => camp[c] + ppi[c]
- id: ADNK1
name: ADNK1
genes: MA1373
equation: adn[c] + atp[c] => adp[c] + amp[c] + h_c[c]
- id: ADOCBIAH
name: ADOCBIAH
genes: MA1623
equation: adocbi[c] + h2o_c[c] => adcobhex[c] + appl[c]
- id: ADOCBLS2
name: ADOCBLS2
genes: MA0939
equation: agdpcbi[c] + r5hbzi[c] => adocblhbi[c] + gmp[c] + h_c[c]
- id: ADPRDP
name: ADPRDP
genes: MA0113
equation: adprib[c] + h2o_c[c] => amp[c] + (2) h_c[c] + r5p[c]
- id: ADPT
name: ADPT
genes: MA0717
equation: amp[c] + ppi[c] <=> ade[c] + prpp[c]
- id: ADSK
name: ADSK
genes: MA4246
equation: aps[c] + atp[c] => adp[c] + h_c[c] + paps[c]
- id: ADSL1
name: ADSL1
genes: MA3971
equation: dcamp[c] <=> amp[c] + fum[c]
- id: ADSL2
name: ADSL2
genes: MA3971
equation: 25aics[c] <=> aicar[c] + fum[c]
- id: ADSS
name: ADSS
genes: MA1919 or MA4118
equation: asp_L[c] + gtp[c] + imp[c] => dcamp[c] + gdp[c] + (2) h_c[c] + pi_c[c]
- id: AGAIAGT
name: AGAIAGT
genes: MA0798
equation: dpgpi[c] + uacgam[c] => agdpgpi[c] + h_c[c] + udp[c]
- id: AGAID
name: AGAID
genes: MA0990
equation: agdpgpi[c] + h2o_c[c] => ac_c[c] + gdpgpi[c]
- id: AGMT
name: AGMT
genes: MA3986
equation: agm[c] + h2o_c[c] <=> ptrc[c] + urea[c]
- id: AGPR
name: AGPR
genes: MA3566
equation: acg5p[c] + h_c[c] + nadph[c] <=> acg5sa[c] + nadp[c] + pi_c[c]
- id: AH6PI
name: AH6PI
genes: MA1384
equation: ah6p_D[c] <=> f6p[c]
- id: AHC
name: AHC
genes: MA1275
equation: ahcys[c] + h2o_c[c] <=> adn[c] + hcys_L[c]
- id: AHGDx
name: AHGDx
equation: S2hglut[c] + nad[c] <=> akg[c] + h_c[c] + nadh[c]
- id: AHMMPS
name: AHMMPS
genes: MA0261 or MA1790 or MA4329
equation: air[c] + (2) h_c[c] + nadh[c] => 4ahmmp[c] + gcald_c[c] + nad[c] + pi_c[c]
- id: AHSERL2
name: AHSERL2
genes: MA2715
equation: achms[c] + h2s_c[c] => ac_c[c] + h_c[c] + hcys_L[c]
- id: AICART
name: AICART
genes: MA4012
equation: 10fthf[c] + aicar[c] <=> fprica[c] + thf[c]
- id: AIRC2
name: AIRC2
genes: MA0428 or MA1376 or MA4063
equation: air[c] + atp[c] + hco3_c[c] => 5caiz[c] + adp[c] + h_c[c] + pi_c[c]
- id: AIRC3
name: AIRC3
genes: MA0428 or MA1376 or MA4063
equation: 5aizc[c] <=> 5caiz[c]
- id: AIRCr
name: AIRCr
genes: MA1376
equation: air[c] + co2_c[c] <=> 5aizc[c] + h_c[c]
- id: AKACAL
name: AKACAL
genes: MA3342
equation: accoa[c] + h2o_c[c] + ohexa[c] => Rh2cit[c] + coa[c] + h_c[c]
- id: AKGCAL
name: AKGCAL
genes: MA3342
equation: accoa[c] + akg[c] => coa[c] + h_c[c] + hacon_T[c]
- id: AKP1
name: AKP1
genes: MA4354
equation: ahdt[c] + (3) h2o_c[c] => dhnpt[c] + (2) h_c[c] + (3) pi_c[c]
- id: AKPCAL
name: AKPCAL
genes: MA3342
equation: accoa[c] + h2o_c[c] + ohepa[c] => Rh3cit[c] + coa[c] + h_c[c]
- id: AKSCAL
name: AKSCAL
equation: 2ood[c] + accoa[c] + h2o_c[c] => glyc_R[c] + pmcoa[c]
- id: AKSDC
name: AKSDC
equation: 2ood[c] + h_c[c] => 7ohp[c] + co2_c[c]
- id: ALACCBX
name: ALACCBX
genes: MA1354 and MA1958
equation: he2thpp[c] + pyr_c[c] => alac_S_c[c] + thmpp[c]
- id: ALACt2r
name: ALACt2r
equation: alac_S_e[e] + h_e[e] <=> alac_S_c[c] + h_c[c]
- id: ALATA_L
name: ALATA_L
genes: MA0636
equation: akg[c] + ala_L_c[c] <=> glu_L_c[c] + pyr_c[c]
- id: ALATRS
name: ALATRS
genes: MA0194
equation: ala_L_c[c] + atp[c] + trnaala[c] => alatrna[c] + amp[c] + ppi[c]
- id: ALAt4r
name: ALAt4r
genes: MA2837
equation: ala_L_e[e] + na1_e[e] <=> ala_L_c[c] + na1_c[c]
- id: ALCD19x
name: ALCD19x
genes: MA2630
equation: glyald[c] + h_c[c] + nadph[c] => glyc[c] + nadp[c]
- id: ALCD19y
name: ALCD19y
genes: MA0403 or MA1901
equation: glyald[c] + h_c[c] + nadph[c] => glyc[c] + nadp[c]
- id: ALCD20x
name: ALCD20x
genes: MA2630
equation: 2ppoh[c] + nad[c] <=> acetone[c] + h_c[c] + nadh[c]
- id: ALCD20y
name: ALCD20y
genes: MA0403 or MA1901
equation: 2ppoh[c] + nadp[c] <=> acetone[c] + h_c[c] + nadph[c]
- id: ALCD22_L_f420
name: ALCD22_L_f420_
equation: f420_2[c] + h_c[c] + lald_L[c] <=> f420_2h2[c] + mthgxl[c]
- id: ALCD2x
name: ALCD2x
genes: MA2630
equation: etoh[c] + nad[c] <=> acald[c] + h_c[c] + nadh[c]
- id: ALCD2y
name: ALCD2y
genes: MA0403 or MA1901
equation: etoh[c] + nadp[c] <=> acald[c] + h_c[c] + nadph[c]
- id: ALDD1
name: ALDD1
genes: MA0417
equation: fald[c] + h2o_c[c] + nad[c] => for_c[c] + (2) h_c[c] + nadh[c]
- id: ALDD20x
name: ALDD20x
genes: MA2860
equation: h2o_c[c] + id3acald[c] + nad[c] => (2) h_c[c] + ind3ac_c[c] + nadh[c]
- id: ALDD2x
name: ALDD2x
genes: MA2860
equation: acald[c] + h2o_c[c] + nad[c] => ac_c[c] + (2) h_c[c] + nadh[c]
- id: ALDD31
name: ALDD31
genes: MA2860
equation: aacald[c] + h2o_c[c] + nad[c] => gly_c[c] + (2) h_c[c] + nadh[c]
- id: ALKP
name: ALKP
genes: MA4354
equation: dhap[c] + h2o_c[c] => dha[c] + pi_c[c]
- id: ALR2_f420
name: ALR2_f420_
genes: MA0422 or MA2291 or MA2292 or MA2756
equation: f420_2h2[c] + mthgxl[c] <=> acetol[c] + f420_2[c] + h_c[c]
- id: AMAOTr
name: AMAOTr
equation: 8aonn[c] + amet[c] <=> amob[c] + dann[c]
- id: AMPMS2
name: AMPMS2
genes: MA1790
equation: air[c] + h2o_c[c] + nad[c] => 4ampm[c] + (2) for_c[c] + (3) h_c[c] +
nadh[c]
- id: AMPTASECG
name: AMPTASECG
genes: MA1605 or MA2653
equation: cgly[c] + h2o_c[c] => cys_L_c[c] + gly_c[c]
- id: ANPRT
name: ANPRT
genes: MA2989
equation: ppi[c] + pran[c] <=> anth[c] + prpp[c]
- id: ANS
name: ANS
genes: MA2986 and MA2987
equation: chor[c] + gln_L[c] => anth[c] + glu_L_c[c] + h_c[c] + pyr_c[c]
- id: ANS2
name: ANS2
genes: MA2986 and MA2987
equation: chor[c] + nh4_c[c] => anth[c] + h2o_c[c] + h_c[c] + pyr_c[c]
- id: AOXSr
name: AOXSr
equation: ala_L_c[c] + h_c[c] + pmcoa[c] <=> 8aonn[c] + co2_c[c] + coa[c]
- id: APAT2
name: APAT2
genes: MA2859
equation: akg[c] + ala_B[c] <=> glu_L_c[c] + msa[c]
- id: APPLP
name: APPLP
genes: MA0940
equation: appl[c] + atp[c] => adp[c] + applp[c] + h_c[c]
- id: ARGDC
name: ARGDC
genes: MA3012 or MA3496
equation: arg_L[c] + h_c[c] => agm[c] + co2_c[c]
- id: ARGDr
name: ARGDr
genes: MA0792
equation: arg_L[c] + h2o_c[c] <=> citr_L[c] + nh4_c[c]
- id: ARGSL
name: ARGSL
genes: MA1318
equation: argsuc[c] <=> arg_L[c] + fum[c]
- id: ARGSS
name: ARGSS
genes: MA2142
equation: asp_L[c] + atp[c] + citr_L[c] => amp[c] + argsuc[c] + h_c[c] + ppi[c]
- id: ARGTRS
name: ARGTRS
genes: MA0043
equation: arg_L[c] + atp[c] + trnaarg[c] => amp[c] + argtrna[c] + ppi[c]
- id: ASADi
name: ASADi
genes: MA0430
equation: 4pasp[c] + h_c[c] + nadph[c] => aspsa[c] + nadp[c] + pi_c[c]
- id: ASD
name: ASD
genes: MA0115
equation: dpgps[c] + h_c[c] => co2_c[c] + dpgpe[c]
- id: ASNN
name: ASNN
genes: MA1317
equation: asn_L[c] + h2o_c[c] => asp_L[c] + nh4_c[c]
- id: ASNS1
name: ASNS1
genes: MA0051 or MA1966
equation: asp_L[c] + atp[c] + gln_L[c] + h2o_c[c] => amp[c] + asn_L[c] + glu_L_c[c]
+ h_c[c] + ppi[c]
- id: ASNTRS2_1
name: ASNTRS2-1
genes: MA1684
equation: asp_L[c] + atp[c] + trnaasn[c] => amp[c] + asntrna_asp_[c] + ppi[c]
- id: ASNTRS2_2
name: ASNTRS2-2
genes: MA4522 and MA4523 and MA4524
equation: asntrna_asp_[c] + atp[c] + gln_L[c] + h2o_c[c] => adp[c] + asntrna[c]
+ glu_L_c[c] + h_c[c] + pi_c[c]
- id: ASP1DC
name: ASP1DC
genes: MA1949
equation: asp_L[c] + h_c[c] => ala_B[c] + co2_c[c]
- id: ASPCT
name: ASPCT
genes: MA4501 and MA4502
equation: asp_L[c] + cbp[c] => cbasp[c] + h_c[c] + pi_c[c]
- id: ASPKi
name: ASPKi
genes: MA0131
equation: asp_L[c] + atp[c] <=> 4pasp[c] + adp[c]
- id: ASPO2x
name: ASPO2x
genes: MA0958
equation: asp_L[c] + nad[c] => h_c[c] + iasp[c] + nadh[c]
- id: ASPO2y
name: ASPO2y
genes: MA0958
equation: asp_L[c] + nadp[c] => h_c[c] + iasp[c] + nadph[c]
- id: ASPTA
name: ASPTA
genes: MA0636 or MA1385 or MA1819
equation: akg[c] + asp_L[c] <=> glu_L_c[c] + oaa[c]
- id: ASPTRS
name: ASPTRS
genes: MA1684
equation: asp_L[c] + atp[c] + trnaasp[c] => amp[c] + asptrna[c] + ppi[c]
- id: ATGH
name: ATGH
genes: MA0691 or MA0692 or MA1484
equation: dggpg[c] + (8) h_c[c] + (8) nadph[c] => dpgpg[c] + (8) nadp[c]
- id: ATIH
name: ATIH
genes: MA0691 or MA0692 or MA1484
equation: dggpi[c] + (8) h_c[c] + (8) nadph[c] => dpgpi[c] + (8) nadp[c]
- id: ATPFORTRX
name: ATPFORTRX
genes: MA0206 or MA3689
equation: aicar[c] + atp[c] + for_c[c] => adp[c] + fprica[c] + pi_c[c]
- id: ATPHs
name: ATPHs
equation: atp[c] + h2o_c[c] + h_c[c] => itp[c] + nh4_c[c]
- id: ATPM
name: ATPM
genes: MA3706
equation: atp[c] + h2o_c[c] => adp[c] + h_c[c] + pi_c[c]
- id: ATPPRT
name: ATPPRT
genes: MA0217
equation: ppi[c] + prbatp[c] <=> atp[c] + prpp[c]
- id: ATPS1
name: ATPS1
genes: MA1678 or MA2833
equation: atp[c] + h2o_c[c] + h_c[c] => adp[c] + (2) h_e[e] + pi_c[c]
- id: ATPS4r
name: ATPS4r
genes: MA4152 and MA4153 and MA4154 and MA4155 and MA4156 and MA4157 and MA4158
and MA4159 and MA4160
equation: adp[c] + (4) h_e[e] + pi_c[c] <=> atp[c] + h2o_c[c] + (3) h_c[c]
- id: ATSH
name: ATSH
genes: MA0691 or MA0692 or MA1484
equation: dgggps[c] + (8) h_c[c] + (8) nadph[c] => dpgps[c] + (8) nadp[c]
- id: BACCL
name: BACCL
genes: MA0676
equation: atp[c] + btn_c[c] + h_c[c] => btamp[c] + ppi[c]
- id: BAMPPALDOX
name: BAMPPALDOX
genes: MA2860
equation: bamppald[c] + h2o_c[c] + nad[c] => ala_B[c] + (2) h_c[c] + nadh[c]
- id: BLAT
name: BLAT
genes: MA3978
equation: 36dahx[c] + accoa[c] => coa[c] + h_c[c] + nabl[c]
- id: BMt
name: BMt
equation: biomass_met_c[c] => biomass_met_e[e]
- id: BRFAPS
name: BRFAPS
genes: MA0339 or MA4006
equation: 4abz_c[c] + h_c[c] + prpp[c] => Brfap[c] + co2_c[c] + ppi[c]
- id: BSPRR
name: BSPRR
equation: btnp[c] + (2) fdox[c] + (2) fe2_c[c] + (2) h2s_c[c] => btnp_s2[c] + (2)
fdred[c] + (4) h_c[c]
- id: BTNabc
name: BTNabc
genes: MA4340 and (MA4341 or MA4342) and MA4343
equation: atp[c] + btn_e[e] + h2o_c[c] => adp[c] + btn_c[c] + h_c[c] + pi_c[c]
- id: BTNt2i
name: BTNt2i
genes: MA4340
equation: btn_e[e] + h_e[e] <=> btn_c[c] + h_c[c]
- id: BTS5
name: BTS5
equation: btnp_s2[c] + dtbt[c] + (2) fdox[c] => btn_c[c] + btnp[c] + (2) fdred[c]
+ (2) fe2_c[c] + h2s_c[c]
- id: CA2abc
name: CA2abc
genes: MA4082
equation: atp[c] + ca2_e[e] + h2o_c[c] => adp[c] + ca2_c[c] + h_c[c] + pi_c[c]
- id: CAT
name: CAT
genes: MA0972
equation: (2) h2o2[c] => (2) h2o_c[c] + o2[c]
- id: CAt6
name: CAt6
genes: MA2008 or MA2817 or MA3021
equation: ca2_c[c] + na1_e[e] <=> ca2_e[e] + na1_c[c]
- id: CBIAT
name: CBIAT
genes: MA2084
equation: atp[c] + cbi_c[c] + h_c[c] <=> adocbi[c] + pppi[c]
- id: CBIabc
name: CBIabc
genes: MA4604 and MA4605 and MA4606
equation: atp[c] + cbi_e[e] + h2o_c[c] => adp[c] + cbi_c[c] + h_c[c] + pi_c[c]
- id: CBL1HBIabc
name: CBL1HBIabc
genes: MA4604 and MA4605 and MA4606
equation: atp[c] + cbl1hbi_e[e] + h2o_c[c] => adp[c] + cbl1hbi_c[c] + h_c[c] +
pi_c[c]
- id: CBL1abc
name: CBL1abc
genes: MA4604 and MA4605 and MA4606
equation: atp[c] + cbl1_e[e] + h2o_c[c] => adp[c] + cbl1_c[c] + h_c[c] + pi_c[c]
- id: CBLAT2
name: CBLAT2
genes: MA2084
equation: atp[c] + cbl1hbi_c[c] + h_c[c] => adocblhbi[c] + pppi[c]
- id: CBLD
name: CBLD
equation: cbl1_c[c] => cbi_c[c] + unknown_cbl1deg_c[c]
- id: CBPS
name: CBPS
genes: MA2143 and MA2144
equation: (2) atp[c] + gln_L[c] + h2o_c[c] + hco3_c[c] => (2) adp[c] + cbp[c] +
glu_L_c[c] + (2) h_c[c] + pi_c[c]
- id: CD2abc1
name: CD2abc1
genes: MA0549 or MA3366 or MA3632
equation: atp[c] + cd2_c[c] + h2o_c[c] => adp[c] + cd2_e[e] + h_c[c] + pi_c[c]
- id: CD2t4
name: CD2t4
genes: MA1117
equation: cd2_c[c] + h_e[e] + k_e[e] <=> cd2_e[e] + h_c[c] + k_c[c]
- id: CDGGGPP3
name: CDGGGPP3
genes: MA0264 or MA0525
equation: cdgggp[c] + glyc1p[c] => cmp[c] + dggpgp[c] + h_c[c]
- id: CDGGGPP4
name: CDGGGPP4
genes: MA0264 or MA0525
equation: 3hcdgggp[c] + glyc1p[c] => 3hdggpgp[c] + cmp[c] + h_c[c]
- id: CDGGGS
name: CDGGGS
genes: MA2010
equation: ctp[c] + dgggp[c] + h_c[c] => cdgggp[c] + ppi[c]
- id: CDGGGS2
name: CDGGGS2
genes: MA2010
equation: 3hdgggp[c] + ctp[c] + h_c[c] => 3hcdgggp[c] + ppi[c]
- id: CDGGGSAT
name: CDGGGSAT
genes: MA0116
equation: cdgggp[c] + ser_L[c] => cmp[c] + dgggps[c] + h_c[c]
- id: CDGGGSAT2
name: CDGGGSAT2
genes: MA0116
equation: 3hcdgggp[c] + ser_L[c] => 3hdgggps[c] + cmp[c] + h_c[c]
- id: CDGGIPT
name: CDGGIPT
genes: MA0525
equation: cdgggp[c] + inost[c] => cmp[c] + dggpi[c] + h_c[c]
- id: CDGGIPT2
name: CDGGIPT2
genes: MA0525
equation: 3hcdgggp[c] + inost[c] => 3hdggpi[c] + cmp[c] + h_c[c]
- id: CF3Ha
name: CF3Ha
equation: f390a[c] + h2o_c[c] => amp[c] + f420_2[c] + (2) h_c[c]
- id: CF3Hg
name: CF3Hg
equation: f390g[c] + h2o_c[c] => f420_2[c] + gmp[c] + h_c[c]
- id: CF3Sa
name: CF3Sa
genes: MA4074
equation: atp[c] + f420_2[c] + h_c[c] => f390a[c] + ppi[c]
- id: CF3Sg
name: CF3Sg
genes: MA4074
equation: f420_2[c] + gtp[c] => f390g[c] + ppi[c]
- id: CH2ACH
name: CH2ACH
genes: MA3085 and MA3751
equation: h2acon_C[c] + h2o_c[c] <=> tih2cit[c]
- id: CH3ACH
name: CH3ACH
genes: MA3085 and MA3751
equation: h2o_c[c] + h3acon_C[c] <=> tih3cit[c]
- id: CH4St
name: CH4St
equation: ch4s_e[e] <=> ch4s_c[c]
- id: CH4t
name: CH4t
equation: ch4_c[c] <=> ch4_e[e]
- id: CHACH
name: CHACH
genes: MA3085 and MA3751
equation: h2o_c[c] + hacon_C[c] <=> ihcit_T[c]
- id: CHORM
name: CHORM
genes: MA1377
equation: chor[c] => pphn[c]
- id: CHORS
name: CHORS
genes: MA0550
equation: 3psme[c] => chor[c] + pi_c[c]
- id: CHRPL
name: CHRPL
genes: MA2986 and MA2987
equation: chor[c] => 4hbz[c] + pyr_c[c]
- id: CM5HBCMT
name: CM5HBCMT
equation: com[c] + m5hbc[c] => 5hbc_red[c] + h_c[c] + mcom[c]
- id: CMLDC
name: CMLDC
genes: MA0409 or MA2469
equation: 2c25dho[c] + h_c[c] => 5odhf2a[c] + co2_c[c]
- id: CMPSAS
name: CMPSAS
genes: MA3766
equation: acnam[c] + ctp[c] <=> cmpacna[c] + ppi[c]
- id: CO2t
name: CO2t
equation: co2_c[c] <=> co2_e[e]
- id: COBALTt5
name: COBALTt5
genes: MA1721
equation: cobalt2_c[c] <=> cobalt2_e[e]
- id: COBS
name: COBS
genes: MA0339
equation: 7mht[c] + atp[c] => adp[c] + cob[c] + h_c[c]
- id: COCHL
name: COCHL
genes: MA0346 or MA0384 or MA0385 or MA0872
equation: atp[c] + cobalt2_c[c] + h2o_c[c] + hgbam[c] => adp[c] + co2dam[c] + (4)
h_c[c] + pi_c[c]
- id: CODH2
name: CODH2
genes: ((MA1016 or MA3860 or MA4399) and (MA1011 or MA3865)) or (MA3283 and (MA1309
or MA3282))
equation: co_c[c] + (2) fdox[c] + h2o_c[c] => co2_c[c] + (2) fdred[c] + (2) h_c[c]
- id: CODH2_SIDERXN
name: CODH2_SIDERXN
genes: (MA1011 or MA3865) and (MA1016 or MA3860 or MA4399)
equation: co_c[c] + h2o_c[c] => for_c[c] + h_c[c]
- id: CODH3
name: CODH3
genes: (MA1012 or MA3864) and (MA1014 or MA3862) and (MA1015 or MA3861)
equation: co_c[c] + coa[c] + mh4spt[c] => accoa[c] + h4spt[c]
- id: CODHr
name: CODHr
genes: (MA1016 or MA3860 or MA4399) and (MA1015 or MA3861) and (MA1014 or MA3862)
and (MA1013 or MA3863) and (MA1012 or MA3864) and (MA1011 or MA3865)
equation: accoa[c] + (2) fdox[c] + h2o_c[c] + h4spt[c] <=> co2_c[c] + coa[c] +
(2) fdred[c] + (2) h_c[c] + mh4spt[c]
- id: COMS
name: COMS
equation: h2o_c[c] + sec[c] => com[c] + nh4_c[c] + pyr_c[c]
- id: COt
name: COt
equation: co_c[c] <=> co_e[e]
- id: CPC2MT
name: CPC2MT
genes: MA4262
equation: amet[c] + copre2[c] => ahcys[c] + copre3[c] + h_c[c]
- id: CPC3MT
name: CPC3MT
genes: MA4259
equation: amet[c] + copre3[c] => ahcys[c] + copre4[c]
- id: CPC4MT
name: CPC4MT
genes: MA4261
equation: amet[c] + copre4[c] => ahcys[c] + copre5[c] + h_c[c]
- id: CPC5MT
name: CPC5MT
genes: MA0521
equation: amet[c] + copre5[c] + h2o_c[c] => acald[c] + ahcys[c] + copre6[c] + (2)
h_c[c]
- id: CPC6MT
name: CPC6MT
genes: MA0520
equation: (2) amet[c] + codhpre6[c] => (2) ahcys[c] + co2_c[c] + copre8[c] + (2)
h_c[c]
- id: CPC6R
name: CPC6R
equation: copre6[c] + (2) h_c[c] + nadph[c] => codhpre6[c] + nadp[c]
- id: CPC8MM
name: CPC8MM
genes: MA4258
equation: copre8[c] + h_c[c] <=> cobya[c]
- id: CS
name: CS
genes: MA0249
equation: cit_c[c] + coa[c] + h_c[c] <=> accoa[c] + h2o_c[c] + oaa[c]
- id: CSND
name: CSND
genes: MA2341
equation: csn[c] + h2o_c[c] + h_c[c] => nh4_c[c] + ura[c]
- id: CTPRIBFLVTX
name: CTPRIBFLVTX
genes: MA0547
equation: ctp[c] + ribflv_c[c] => cdp[c] + fmn[c] + h_c[c]
- id: CTPS1
name: CTPS1
genes: MA3279
equation: atp[c] + nh4_c[c] + utp[c] => adp[c] + ctp[c] + (2) h_c[c] + pi_c[c]
- id: CTPS2
name: CTPS2
genes: MA3279
equation: atp[c] + gln_L[c] + h2o_c[c] + utp[c] => adp[c] + ctp[c] + glu_L_c[c]
+ (2) h_c[c] + pi_c[c]
- id: CYRDAAT
name: CYRDAAT
genes: MA2084
equation: atp[c] + co1dam[c] + h_c[c] => adcobdam[c] + pppi[c]
- id: CYRDAR
name: CYRDAR
equation: (2) co2dam[c] + nadh[c] => (2) co1dam[c] + h_c[c] + nad[c]
- id: CYRDAS
name: CYRDAS
genes: MA0106 or MA3626
equation: (2) atp[c] + cobya[c] + (2) gln_L[c] + h2o_c[c] => (2) adp[c] + co2dam[c]
+ (2) glu_L_c[c] + h_c[c] + ppi[c]
- id: CYSDS
name: CYSDS
genes: MA2532
equation: cys_L_c[c] + h2o_c[c] => h2s_c[c] + nh4_c[c] + pyr_c[c]
- id: CYSSr
name: CYSSr
genes: MA2720
equation: acser[c] + h2s_c[c] <=> ac_c[c] + cys_L_c[c] + h_c[c]
- id: CYSTA
name: CYSTA
genes: MA0636 or MA1385 or MA1819
equation: akg[c] + cys_L_c[c] <=> glu_L_c[c] + mercppyr[c]
- id: CYSTRS
name: CYSTRS
genes: MA0749
equation: atp[c] + cys_L_c[c] + trnacys[c] => amp[c] + cystrna[c] + ppi[c]
- id: CYSt2r
name: CYSt2r
equation: cys_L_e[e] + h_e[e] <=> cys_L_c[c] + h_c[c]
- id: CYTDK1
name: CYTDK1
genes: MA1373
equation: atp[c] + cytd[c] => adp[c] + cmp[c] + h_c[c]
- id: CYTDK3
name: CYTDK3
genes: MA1104
equation: cytd[c] + itp[c] => cmp[c] + h_c[c] + idp[c]
- id: CYTK1
name: CYTK1
genes: MA1104
equation: atp[c] + cmp[c] <=> adp[c] + cdp[c]
- id: CYTK2
name: CYTK2
genes: MA1104
equation: atp[c] + dcmp[c] <=> adp[c] + dcdp[c]
- id: CYTK5
name: CYTK5
genes: MA1104
equation: ctp[c] + dcmp[c] <=> cdp[c] + dcdp[c]
- id: Clt
name: Clt
genes: MA3609
equation: cl_e[e] <=> cl_c[c]
- id: Coabc
name: Coabc
genes: (MA0393 or MA0869 or MA1748 or MA3552) and (MA0394 or MA0870 or MA1747 or
MA3551) and MA3553
equation: atp[c] + cobalt2_e[e] + h2o_c[c] => adp[c] + cobalt2_c[c] + h_c[c] +
pi_c[c]
- id: Cuabc
name: Cuabc
genes: MA1342
equation: atp[c] + cu2_e[e] + h2o_c[c] => adp[c] + cu2_c[c] + h_c[c] + pi_c[c]
- id: Cut1
name: Cut1
genes: MA0166 or MA1342
equation: atp[c] + cu2_c[c] + h2o_c[c] => adp[c] + cu2_e[e] + h_c[c] + pi_c[c]
- id: DADK
name: DADK
genes: MA1096
equation: atp[c] + damp[c] <=> adp[c] + dadp[c]
- id: DAPDC
name: DAPDC
genes: MA0726
equation: 26dap_M[c] + h_c[c] => co2_c[c] + lys_L_c[c]
- id: DAPE
name: DAPE
equation: 26dap_LL[c] <=> 26dap_M[c]
- id: DAPNH4T
name: DAPNH4T
genes: MA1712
equation: glu_L_c[c] + h2o_c[c] + thdp[c] => 26dap_LL[c] + akg[c]
- id: DATPHs
name: DATPHs
equation: datp[c] + h2o_c[c] + h_c[c] => ditp[c] + nh4_c[c]
- id: DB4PS
name: DB4PS
genes: MA0548
equation: ru5p_D[c] => db4p[c] + for_c[c] + h_c[c]
- id: DBTSr
name: DBTSr
equation: atp[c] + co2_c[c] + dann[c] => adp[c] + dtbt[c] + (3) h_c[c] + pi_c[c]
- id: DCMPDA
name: DCMPDA
genes: MA0136 or MA0137
equation: dcmp[c] + h2o_c[c] + h_c[c] <=> dump[c] + nh4_c[c]
- id: DCTPD
name: DCTPD
genes: MA0440
equation: dctp[c] + h2o_c[c] + h_c[c] => dutp[c] + nh4_c[c]
- id: DGGGPS
name: DGGGPS
genes: MA0961
equation: ggdp[c] + gggp[c] => dgggp[c] + ppi[c]
- id: DGGGPS2
name: DGGGPS2
genes: MA0961
equation: 3hggdp[c] + gggp[c] => 3hdgggp[c] + ppi[c]
- id: DGGPGP
name: DGGPGP
genes: MA1569
equation: dggpgp[c] + h2o_c[c] => dggpg[c] + pi_c[c]
- id: DGGPGP2
name: DGGPGP2
genes: MA1569
equation: 3hdggpgp[c] + h2o_c[c] => 3hdggpg[c] + pi_c[c]
- id: DGLY3POX
name: DGLY3POX
genes: MA1714
equation: (2) fdox[c] + g3p[c] + h2o_c[c] => 3pg[c] + (2) fdred[c] + (3) h_c[c]
- id: DGLYOX
name: DGLYOX
genes: MA2860
equation: glyald[c] + h2o_c[c] + nad[c] => glyc_R[c] + (2) h_c[c] + nadh[c]
- id: DHAD1
name: DHAD1
genes: MA1802 or MA3373
equation: 23dhmb[c] => 3mob[c] + h2o_c[c]
- id: DHAD2
name: DHAD2
genes: MA1802 or MA3373
equation: 23dhmp[c] => 3mop[c] + h2o_c[c]
- id: DHDPRx
name: DHDPRx
genes: MA4474
equation: nad[c] + thdp[c] <=> 23dhdp[c] + h_c[c] + nadh[c]
- id: DHDPRy
name: DHDPRy
genes: MA4474
equation: nadp[c] + thdp[c] <=> 23dhdp[c] + h_c[c] + nadph[c]
- id: DHDPS
name: DHDPS
genes: MA4473
equation: aspsa[c] + pyr_c[c] => 23dhdp[c] + (2) h2o_c[c]
- id: DHFR
name: DHFR
equation: dhf[c] + h_c[c] + nadph[c] <=> nadp[c] + thf[c]
- id: DHFS
name: DHFS
equation: atp[c] + dhpt[c] + glu_L_c[c] => adp[c] + dhf[c] + h_c[c] + pi_c[c]
- id: DHNPA2
name: DHNPA2
equation: dhnpt[c] => 6hmhpt[c] + gcald_c[c] + h_c[c]
- id: DHORD7
name: DHORD7
genes: MA0583 and MA0584
equation: dhor_S[c] + f420_2[c] + h_c[c] <=> f420_2h2[c] + orot[c]
- id: DHORTS
name: DHORTS
genes: MA0892
equation: dhor_S[c] + h2o_c[c] <=> cbasp[c] + h_c[c]
- id: DHPCPH
name: DHPCPH
equation: dhp23cp[c] + h2o_c[c] => dhpmp[c] + h_c[c]
- id: DHPS2
name: DHPS2
genes: MA3516
equation: 4abz_c[c] + 6hmhptpp[c] + h_c[c] => dhpt[c] + ppi[c]
- id: DHPS3
name: DHPS3
genes: MA1946 or MA3419
equation: 6hmhptpp[c] + Brfap[c] + h_c[c] => dhrfap[c] + ppi[c]
- id: DHQAT
name: DHQAT
equation: 3dhq[c] + nh4_c[c] => 4adhq[c] + h2o_c[c]
- id: DHQD
name: DHQD
genes: MA4593
equation: 3dhq[c] => 3dhsk[c] + h2o_c[c]
- id: DHQS2
name: DHQS2
genes: MA4592
equation: dohdu[c] => 3dhq[c]
- id: DIPS
name: DIPS
genes: MA1370
equation: amet[c] + caphis[c] => ahcys[c] + cmaphis[c] + h_c[c]
- id: DKFPASPL
name: DKFPASPL
genes: MA4591
equation: aspsa[c] + dkfp[c] + h_c[c] + nadh[c] => dohau[c] + g3p[c] + nad[c]
- id: DKFPR
name: DKFPR
equation: dkfp[c] + h_c[c] + nadh[c] <=> dkmp[c] + nad[c]
- id: DKFPS2
name: DKFPS2
genes: MA2666 or MA3889
equation: fdp[c] + mthgxl[c] <=> dkfp[c] + g3p[c]
- id: DKFPS3
name: DKFPS3
genes: MA2666 or MA3889
equation: f1p[c] + mthgxl[c] <=> dkfp[c] + gald[c]
- id: DMAMT
name: DMAMT
genes: MA0146 and (MA0532 or MA0933 or MA2425) and (MA0527 or MA0934 or MA2424)
and (MA0150 or MA0849 or MA4360)
equation: 5hbc_red[c] + dma_c[c] + h_c[c] => m5hbc[c] + mma_c[c]
- id: DMATT
name: DMATT
genes: MA0606
equation: dmpp[c] + ipdp[c] => grdp[c] + ppi[c]
- id: DMATT2
name: DMATT2
genes: MA0606
equation: ipdp[c] + m3hdp[c] => 3hgrdp[c] + ppi[c]
- id: DMAt
name: DMAt
genes: MA0143
equation: dma_e[e] + h_e[e] <=> dma_c[c] + h_c[c]
- id: DMHDRFS
name: DMHDRFS
genes: (MA1490 or MA1489) and MA1491
equation: 34hpp[c] + 4r5au[c] + h2o_c[c] + (2) nadp[c] => ddhrb[c] + (3) h_c[c]
+ (2) nadph[c] + nh4_c[c] + oxa[c]
- id: DMSt
name: DMSt
equation: dms_e[e] <=> dms_c[c]
- id: DNADDP
name: DNADDP
genes: MA1439
equation: dnad[c] + h2o_c[c] => amp[c] + (2) h_c[c] + nicrnt[c]
- id: DNMPPA
name: DNMPPA
equation: dhpmp[c] + h2o_c[c] => dhnpt[c] + pi_c[c]
- id: DOHDUS
name: DOHDUS
genes: MA4592