From 4076930bf834b9ba53a3a379d98f792a12fa246f Mon Sep 17 00:00:00 2001 From: hsolbrig Date: Thu, 13 May 2021 12:50:11 -0500 Subject: [PATCH] Include JSON-LD files as well for RDF transformations --- linkml_runtime/linkml_model/jsonld/README.md | 3 + .../jsonld/annotations.context.jsonld | 17 + .../jsonld/annotations.model.context.jsonld | 17 + .../linkml_model/jsonld/context.jsonld | 299 ++++++++++++++++++ .../jsonld/extensions.context.jsonld | 14 + .../jsonld/extensions.model.context.jsonld | 14 + .../jsonld/mappings.context.jsonld | 47 +++ .../jsonld/mappings.model.context.jsonld | 47 +++ .../linkml_model/jsonld/meta.context.jsonld | 299 ++++++++++++++++++ .../jsonld/meta.model.context.jsonld | 299 ++++++++++++++++++ .../linkml_model/jsonld/types.context.jsonld | 10 + .../jsonld/types.model.context.jsonld | 10 + 12 files changed, 1076 insertions(+) create mode 100644 linkml_runtime/linkml_model/jsonld/README.md create mode 100644 linkml_runtime/linkml_model/jsonld/annotations.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/annotations.model.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/extensions.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/extensions.model.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/mappings.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/mappings.model.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/meta.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/meta.model.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/types.context.jsonld create mode 100644 linkml_runtime/linkml_model/jsonld/types.model.context.jsonld diff --git a/linkml_runtime/linkml_model/jsonld/README.md b/linkml_runtime/linkml_model/jsonld/README.md new file mode 100644 index 00000000..dd385a7d --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/README.md @@ -0,0 +1,3 @@ +# jsonld + +Do not edit the files in here - these are autogenerated from the schema. See the Makefile for details. diff --git a/linkml_runtime/linkml_model/jsonld/annotations.context.jsonld b/linkml_runtime/linkml_model/jsonld/annotations.context.jsonld new file mode 100644 index 00000000..27859fc2 --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/annotations.context.jsonld @@ -0,0 +1,17 @@ +{ + "_comments": "Auto generated from annotations.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: annotations\n \n id: https://w3id.org/linkml/annotations\n description: Annotations mixin\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "linkml": "https://w3id.org/linkml/", + "@vocab": "https://w3id.org/linkml/", + "annotations": { + "@type": "@id" + }, + "tag": { + "@type": "@id" + }, + "extensions": { + "@type": "@id" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/annotations.model.context.jsonld b/linkml_runtime/linkml_model/jsonld/annotations.model.context.jsonld new file mode 100644 index 00000000..27859fc2 --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/annotations.model.context.jsonld @@ -0,0 +1,17 @@ +{ + "_comments": "Auto generated from annotations.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: annotations\n \n id: https://w3id.org/linkml/annotations\n description: Annotations mixin\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "linkml": "https://w3id.org/linkml/", + "@vocab": "https://w3id.org/linkml/", + "annotations": { + "@type": "@id" + }, + "tag": { + "@type": "@id" + }, + "extensions": { + "@type": "@id" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/context.jsonld b/linkml_runtime/linkml_model/jsonld/context.jsonld new file mode 100644 index 00000000..ac1dbea2 --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/context.jsonld @@ -0,0 +1,299 @@ +{ + "_comments": "Auto generated from meta.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: meta\n \n id: https://w3id.org/linkml/meta\n description: A metamodel for defining linked open data schemas\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "IAO": { + "@id": "http://purl.obolibrary.org/obo/IAO_", + "@prefix": true + }, + "OIO": "http://www.geneontology.org/formats/oboInOwl#", + "bibo": "http://purl.org/ontology/bibo/", + "dcterms": "http://purl.org/dc/terms/", + "linkml": "https://w3id.org/linkml/", + "oslc": "http://open-services.net/ns/core#", + "owl": "http://www.w3.org/2002/07/owl#", + "pav": "http://purl.org/pav/", + "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#", + "rdfs": "http://www.w3.org/2000/01/rdf-schema#", + "schema": "http://schema.org/", + "skos": "http://www.w3.org/2004/02/skos/core#", + "xsd": "http://www.w3.org/2001/XMLSchema#", + "@vocab": "https://w3id.org/linkml/", + "abstract": { + "@type": "xsd:boolean" + }, + "aliases": { + "@id": "skos:altLabel" + }, + "alt_descriptions": { + "@type": "@id" + }, + "annotations": { + "@type": "@id" + }, + "apply_to": { + "@type": "@id" + }, + "attributes": { + "@type": "@id" + }, + "broad_mappings": { + "@type": "@id", + "@id": "skos:broadMatch" + }, + "class_uri": { + "@type": "@id" + }, + "classes": { + "@type": "@id" + }, + "close_mappings": { + "@type": "@id", + "@id": "skos:closeMatch" + }, + "code_set": { + "@type": "@id" + }, + "comments": { + "@id": "skos:note" + }, + "created_by": { + "@type": "@id", + "@id": "pav:createdBy" + }, + "created_on": { + "@type": "xsd:dateTime", + "@id": "pav:createdOn" + }, + "default_range": { + "@type": "@id" + }, + "defining_slots": { + "@type": "@id" + }, + "definition_uri": { + "@type": "@id" + }, + "deprecated_element_has_exact_replacement": { + "@type": "@id" + }, + "deprecated_element_has_possible_replacement": { + "@type": "@id" + }, + "description": { + "@id": "skos:definition" + }, + "domain": { + "@type": "@id" + }, + "domain_of": { + "@type": "@id" + }, + "enums": { + "@type": "@id" + }, + "exact_mappings": { + "@type": "@id", + "@id": "skos:exactMatch" + }, + "examples": { + "@type": "@id" + }, + "tag": { + "@type": "@id" + }, + "extensions": { + "@type": "@id" + }, + "from_schema": { + "@type": "@id", + "@id": "skos:inScheme" + }, + "generation_date": { + "@type": "xsd:dateTime" + }, + "id": { + "@type": "@id" + }, + "identifier": { + "@type": "xsd:boolean" + }, + "imports": { + "@type": "@id" + }, + "in_subset": { + "@type": "@id", + "@id": "OIO:inSubset" + }, + "inherited": { + "@type": "xsd:boolean" + }, + "inlined": { + "@type": "xsd:boolean" + }, + "inlined_as_list": { + "@type": "xsd:boolean" + }, + "inverse": { + "@type": "@id", + "@id": "owl:inverseOf" + }, + "is_a": { + "@type": "@id" + }, + "is_class_field": { + "@type": "xsd:boolean" + }, + "is_usage_slot": { + "@type": "xsd:boolean" + }, + "key": { + "@type": "xsd:boolean" + }, + "last_updated_on": { + "@type": "xsd:dateTime", + "@id": "pav:lastUpdatedOn" + }, + "license": { + "@id": "dcterms:license" + }, + "local_name_value": { + "@id": "skos:altLabel" + }, + "local_names": { + "@type": "@id" + }, + "mappings": { + "@type": "@id", + "@id": "skos:mappingRelation" + }, + "maximum_value": { + "@type": "xsd:integer" + }, + "meaning": { + "@type": "@id" + }, + "minimum_value": { + "@type": "xsd:integer" + }, + "mixin": { + "@type": "xsd:boolean" + }, + "mixins": { + "@type": "@id" + }, + "modified_by": { + "@type": "@id", + "@id": "oslc:modifiedBy" + }, + "multivalued": { + "@type": "xsd:boolean" + }, + "name": "@id", + "narrow_mappings": { + "@type": "@id", + "@id": "skos:narrowMatch" + }, + "notes": { + "@id": "skos:editorialNote" + }, + "owner": { + "@type": "@id" + }, + "permissible_values": { + "@type": "@id" + }, + "prefix_reference": { + "@type": "@id" + }, + "prefixes": { + "@type": "@id" + }, + "pv_formula": { + "@context": { + "@vocab": "@null", + "text": "skos:notation", + "description": "skos:prefLabel", + "meaning": "@id" + } + }, + "range": { + "@type": "@id" + }, + "related_mappings": { + "@type": "@id", + "@id": "skos:relatedMatch" + }, + "required": { + "@type": "xsd:boolean" + }, + "see_also": { + "@type": "@id", + "@id": "rdfs:seeAlso" + }, + "singular_name": { + "@id": "skos:altLabel" + }, + "slots": { + "@type": "@id" + }, + "slot_uri": { + "@type": "@id" + }, + "slot_usage": { + "@type": "@id" + }, + "source_file_date": { + "@type": "xsd:dateTime" + }, + "source_file_size": { + "@type": "xsd:integer" + }, + "status": { + "@type": "@id", + "@id": "bibo:status" + }, + "subclass_of": { + "@type": "@id", + "@id": "rdfs:subClassOf" + }, + "subproperty_of": { + "@type": "@id", + "@id": "rdfs:subPropertyOf" + }, + "subsets": { + "@type": "@id" + }, + "symmetric": { + "@type": "xsd:boolean" + }, + "text": "@id", + "title": { + "@id": "dcterms:title" + }, + "tree_root": { + "@type": "xsd:boolean" + }, + "uri": { + "@type": "@id" + }, + "typeof": { + "@type": "@id" + }, + "types": { + "@type": "@id" + }, + "union_of": { + "@type": "@id" + }, + "value": { + "@id": "skos:example" + }, + "values_from": { + "@type": "@id" + }, + "version": { + "@id": "pav:version" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/extensions.context.jsonld b/linkml_runtime/linkml_model/jsonld/extensions.context.jsonld new file mode 100644 index 00000000..d68e723e --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/extensions.context.jsonld @@ -0,0 +1,14 @@ +{ + "_comments": "Auto generated from extensions.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: extensions\n \n id: https://w3id.org/linkml/extensions\n description: Extension mixin\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "linkml": "https://w3id.org/linkml/", + "@vocab": "https://w3id.org/linkml/", + "tag": { + "@type": "@id" + }, + "extensions": { + "@type": "@id" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/extensions.model.context.jsonld b/linkml_runtime/linkml_model/jsonld/extensions.model.context.jsonld new file mode 100644 index 00000000..d68e723e --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/extensions.model.context.jsonld @@ -0,0 +1,14 @@ +{ + "_comments": "Auto generated from extensions.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: extensions\n \n id: https://w3id.org/linkml/extensions\n description: Extension mixin\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "linkml": "https://w3id.org/linkml/", + "@vocab": "https://w3id.org/linkml/", + "tag": { + "@type": "@id" + }, + "extensions": { + "@type": "@id" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/mappings.context.jsonld b/linkml_runtime/linkml_model/jsonld/mappings.context.jsonld new file mode 100644 index 00000000..eedba6e7 --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/mappings.context.jsonld @@ -0,0 +1,47 @@ +{ + "_comments": "Auto generated from mappings.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: mappings\n \n id: https://w3id.org/linkml/mappings\n description: LinkML model for mappings\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "IAO": { + "@id": "http://purl.obolibrary.org/obo/IAO_", + "@prefix": true + }, + "OIO": "http://www.geneontology.org/formats/oboInOwl#", + "linkml": "https://w3id.org/linkml/", + "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#", + "rdfs": "http://www.w3.org/2000/01/rdf-schema#", + "skos": "http://www.w3.org/2004/02/skos/core#", + "xsd": "http://www.w3.org/2001/XMLSchema#", + "@vocab": "https://w3id.org/linkml/", + "broad_mappings": { + "@type": "@id", + "@id": "skos:broadMatch" + }, + "close_mappings": { + "@type": "@id", + "@id": "skos:closeMatch" + }, + "deprecated_element_has_exact_replacement": { + "@type": "@id" + }, + "deprecated_element_has_possible_replacement": { + "@type": "@id" + }, + "exact_mappings": { + "@type": "@id", + "@id": "skos:exactMatch" + }, + "mappings": { + "@type": "@id", + "@id": "skos:mappingRelation" + }, + "narrow_mappings": { + "@type": "@id", + "@id": "skos:narrowMatch" + }, + "related_mappings": { + "@type": "@id", + "@id": "skos:relatedMatch" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/mappings.model.context.jsonld b/linkml_runtime/linkml_model/jsonld/mappings.model.context.jsonld new file mode 100644 index 00000000..eedba6e7 --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/mappings.model.context.jsonld @@ -0,0 +1,47 @@ +{ + "_comments": "Auto generated from mappings.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: mappings\n \n id: https://w3id.org/linkml/mappings\n description: LinkML model for mappings\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "IAO": { + "@id": "http://purl.obolibrary.org/obo/IAO_", + "@prefix": true + }, + "OIO": "http://www.geneontology.org/formats/oboInOwl#", + "linkml": "https://w3id.org/linkml/", + "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#", + "rdfs": "http://www.w3.org/2000/01/rdf-schema#", + "skos": "http://www.w3.org/2004/02/skos/core#", + "xsd": "http://www.w3.org/2001/XMLSchema#", + "@vocab": "https://w3id.org/linkml/", + "broad_mappings": { + "@type": "@id", + "@id": "skos:broadMatch" + }, + "close_mappings": { + "@type": "@id", + "@id": "skos:closeMatch" + }, + "deprecated_element_has_exact_replacement": { + "@type": "@id" + }, + "deprecated_element_has_possible_replacement": { + "@type": "@id" + }, + "exact_mappings": { + "@type": "@id", + "@id": "skos:exactMatch" + }, + "mappings": { + "@type": "@id", + "@id": "skos:mappingRelation" + }, + "narrow_mappings": { + "@type": "@id", + "@id": "skos:narrowMatch" + }, + "related_mappings": { + "@type": "@id", + "@id": "skos:relatedMatch" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/meta.context.jsonld b/linkml_runtime/linkml_model/jsonld/meta.context.jsonld new file mode 100644 index 00000000..ac1dbea2 --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/meta.context.jsonld @@ -0,0 +1,299 @@ +{ + "_comments": "Auto generated from meta.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: meta\n \n id: https://w3id.org/linkml/meta\n description: A metamodel for defining linked open data schemas\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "IAO": { + "@id": "http://purl.obolibrary.org/obo/IAO_", + "@prefix": true + }, + "OIO": "http://www.geneontology.org/formats/oboInOwl#", + "bibo": "http://purl.org/ontology/bibo/", + "dcterms": "http://purl.org/dc/terms/", + "linkml": "https://w3id.org/linkml/", + "oslc": "http://open-services.net/ns/core#", + "owl": "http://www.w3.org/2002/07/owl#", + "pav": "http://purl.org/pav/", + "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#", + "rdfs": "http://www.w3.org/2000/01/rdf-schema#", + "schema": "http://schema.org/", + "skos": "http://www.w3.org/2004/02/skos/core#", + "xsd": "http://www.w3.org/2001/XMLSchema#", + "@vocab": "https://w3id.org/linkml/", + "abstract": { + "@type": "xsd:boolean" + }, + "aliases": { + "@id": "skos:altLabel" + }, + "alt_descriptions": { + "@type": "@id" + }, + "annotations": { + "@type": "@id" + }, + "apply_to": { + "@type": "@id" + }, + "attributes": { + "@type": "@id" + }, + "broad_mappings": { + "@type": "@id", + "@id": "skos:broadMatch" + }, + "class_uri": { + "@type": "@id" + }, + "classes": { + "@type": "@id" + }, + "close_mappings": { + "@type": "@id", + "@id": "skos:closeMatch" + }, + "code_set": { + "@type": "@id" + }, + "comments": { + "@id": "skos:note" + }, + "created_by": { + "@type": "@id", + "@id": "pav:createdBy" + }, + "created_on": { + "@type": "xsd:dateTime", + "@id": "pav:createdOn" + }, + "default_range": { + "@type": "@id" + }, + "defining_slots": { + "@type": "@id" + }, + "definition_uri": { + "@type": "@id" + }, + "deprecated_element_has_exact_replacement": { + "@type": "@id" + }, + "deprecated_element_has_possible_replacement": { + "@type": "@id" + }, + "description": { + "@id": "skos:definition" + }, + "domain": { + "@type": "@id" + }, + "domain_of": { + "@type": "@id" + }, + "enums": { + "@type": "@id" + }, + "exact_mappings": { + "@type": "@id", + "@id": "skos:exactMatch" + }, + "examples": { + "@type": "@id" + }, + "tag": { + "@type": "@id" + }, + "extensions": { + "@type": "@id" + }, + "from_schema": { + "@type": "@id", + "@id": "skos:inScheme" + }, + "generation_date": { + "@type": "xsd:dateTime" + }, + "id": { + "@type": "@id" + }, + "identifier": { + "@type": "xsd:boolean" + }, + "imports": { + "@type": "@id" + }, + "in_subset": { + "@type": "@id", + "@id": "OIO:inSubset" + }, + "inherited": { + "@type": "xsd:boolean" + }, + "inlined": { + "@type": "xsd:boolean" + }, + "inlined_as_list": { + "@type": "xsd:boolean" + }, + "inverse": { + "@type": "@id", + "@id": "owl:inverseOf" + }, + "is_a": { + "@type": "@id" + }, + "is_class_field": { + "@type": "xsd:boolean" + }, + "is_usage_slot": { + "@type": "xsd:boolean" + }, + "key": { + "@type": "xsd:boolean" + }, + "last_updated_on": { + "@type": "xsd:dateTime", + "@id": "pav:lastUpdatedOn" + }, + "license": { + "@id": "dcterms:license" + }, + "local_name_value": { + "@id": "skos:altLabel" + }, + "local_names": { + "@type": "@id" + }, + "mappings": { + "@type": "@id", + "@id": "skos:mappingRelation" + }, + "maximum_value": { + "@type": "xsd:integer" + }, + "meaning": { + "@type": "@id" + }, + "minimum_value": { + "@type": "xsd:integer" + }, + "mixin": { + "@type": "xsd:boolean" + }, + "mixins": { + "@type": "@id" + }, + "modified_by": { + "@type": "@id", + "@id": "oslc:modifiedBy" + }, + "multivalued": { + "@type": "xsd:boolean" + }, + "name": "@id", + "narrow_mappings": { + "@type": "@id", + "@id": "skos:narrowMatch" + }, + "notes": { + "@id": "skos:editorialNote" + }, + "owner": { + "@type": "@id" + }, + "permissible_values": { + "@type": "@id" + }, + "prefix_reference": { + "@type": "@id" + }, + "prefixes": { + "@type": "@id" + }, + "pv_formula": { + "@context": { + "@vocab": "@null", + "text": "skos:notation", + "description": "skos:prefLabel", + "meaning": "@id" + } + }, + "range": { + "@type": "@id" + }, + "related_mappings": { + "@type": "@id", + "@id": "skos:relatedMatch" + }, + "required": { + "@type": "xsd:boolean" + }, + "see_also": { + "@type": "@id", + "@id": "rdfs:seeAlso" + }, + "singular_name": { + "@id": "skos:altLabel" + }, + "slots": { + "@type": "@id" + }, + "slot_uri": { + "@type": "@id" + }, + "slot_usage": { + "@type": "@id" + }, + "source_file_date": { + "@type": "xsd:dateTime" + }, + "source_file_size": { + "@type": "xsd:integer" + }, + "status": { + "@type": "@id", + "@id": "bibo:status" + }, + "subclass_of": { + "@type": "@id", + "@id": "rdfs:subClassOf" + }, + "subproperty_of": { + "@type": "@id", + "@id": "rdfs:subPropertyOf" + }, + "subsets": { + "@type": "@id" + }, + "symmetric": { + "@type": "xsd:boolean" + }, + "text": "@id", + "title": { + "@id": "dcterms:title" + }, + "tree_root": { + "@type": "xsd:boolean" + }, + "uri": { + "@type": "@id" + }, + "typeof": { + "@type": "@id" + }, + "types": { + "@type": "@id" + }, + "union_of": { + "@type": "@id" + }, + "value": { + "@id": "skos:example" + }, + "values_from": { + "@type": "@id" + }, + "version": { + "@id": "pav:version" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/meta.model.context.jsonld b/linkml_runtime/linkml_model/jsonld/meta.model.context.jsonld new file mode 100644 index 00000000..ac1dbea2 --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/meta.model.context.jsonld @@ -0,0 +1,299 @@ +{ + "_comments": "Auto generated from meta.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: meta\n \n id: https://w3id.org/linkml/meta\n description: A metamodel for defining linked open data schemas\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "IAO": { + "@id": "http://purl.obolibrary.org/obo/IAO_", + "@prefix": true + }, + "OIO": "http://www.geneontology.org/formats/oboInOwl#", + "bibo": "http://purl.org/ontology/bibo/", + "dcterms": "http://purl.org/dc/terms/", + "linkml": "https://w3id.org/linkml/", + "oslc": "http://open-services.net/ns/core#", + "owl": "http://www.w3.org/2002/07/owl#", + "pav": "http://purl.org/pav/", + "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#", + "rdfs": "http://www.w3.org/2000/01/rdf-schema#", + "schema": "http://schema.org/", + "skos": "http://www.w3.org/2004/02/skos/core#", + "xsd": "http://www.w3.org/2001/XMLSchema#", + "@vocab": "https://w3id.org/linkml/", + "abstract": { + "@type": "xsd:boolean" + }, + "aliases": { + "@id": "skos:altLabel" + }, + "alt_descriptions": { + "@type": "@id" + }, + "annotations": { + "@type": "@id" + }, + "apply_to": { + "@type": "@id" + }, + "attributes": { + "@type": "@id" + }, + "broad_mappings": { + "@type": "@id", + "@id": "skos:broadMatch" + }, + "class_uri": { + "@type": "@id" + }, + "classes": { + "@type": "@id" + }, + "close_mappings": { + "@type": "@id", + "@id": "skos:closeMatch" + }, + "code_set": { + "@type": "@id" + }, + "comments": { + "@id": "skos:note" + }, + "created_by": { + "@type": "@id", + "@id": "pav:createdBy" + }, + "created_on": { + "@type": "xsd:dateTime", + "@id": "pav:createdOn" + }, + "default_range": { + "@type": "@id" + }, + "defining_slots": { + "@type": "@id" + }, + "definition_uri": { + "@type": "@id" + }, + "deprecated_element_has_exact_replacement": { + "@type": "@id" + }, + "deprecated_element_has_possible_replacement": { + "@type": "@id" + }, + "description": { + "@id": "skos:definition" + }, + "domain": { + "@type": "@id" + }, + "domain_of": { + "@type": "@id" + }, + "enums": { + "@type": "@id" + }, + "exact_mappings": { + "@type": "@id", + "@id": "skos:exactMatch" + }, + "examples": { + "@type": "@id" + }, + "tag": { + "@type": "@id" + }, + "extensions": { + "@type": "@id" + }, + "from_schema": { + "@type": "@id", + "@id": "skos:inScheme" + }, + "generation_date": { + "@type": "xsd:dateTime" + }, + "id": { + "@type": "@id" + }, + "identifier": { + "@type": "xsd:boolean" + }, + "imports": { + "@type": "@id" + }, + "in_subset": { + "@type": "@id", + "@id": "OIO:inSubset" + }, + "inherited": { + "@type": "xsd:boolean" + }, + "inlined": { + "@type": "xsd:boolean" + }, + "inlined_as_list": { + "@type": "xsd:boolean" + }, + "inverse": { + "@type": "@id", + "@id": "owl:inverseOf" + }, + "is_a": { + "@type": "@id" + }, + "is_class_field": { + "@type": "xsd:boolean" + }, + "is_usage_slot": { + "@type": "xsd:boolean" + }, + "key": { + "@type": "xsd:boolean" + }, + "last_updated_on": { + "@type": "xsd:dateTime", + "@id": "pav:lastUpdatedOn" + }, + "license": { + "@id": "dcterms:license" + }, + "local_name_value": { + "@id": "skos:altLabel" + }, + "local_names": { + "@type": "@id" + }, + "mappings": { + "@type": "@id", + "@id": "skos:mappingRelation" + }, + "maximum_value": { + "@type": "xsd:integer" + }, + "meaning": { + "@type": "@id" + }, + "minimum_value": { + "@type": "xsd:integer" + }, + "mixin": { + "@type": "xsd:boolean" + }, + "mixins": { + "@type": "@id" + }, + "modified_by": { + "@type": "@id", + "@id": "oslc:modifiedBy" + }, + "multivalued": { + "@type": "xsd:boolean" + }, + "name": "@id", + "narrow_mappings": { + "@type": "@id", + "@id": "skos:narrowMatch" + }, + "notes": { + "@id": "skos:editorialNote" + }, + "owner": { + "@type": "@id" + }, + "permissible_values": { + "@type": "@id" + }, + "prefix_reference": { + "@type": "@id" + }, + "prefixes": { + "@type": "@id" + }, + "pv_formula": { + "@context": { + "@vocab": "@null", + "text": "skos:notation", + "description": "skos:prefLabel", + "meaning": "@id" + } + }, + "range": { + "@type": "@id" + }, + "related_mappings": { + "@type": "@id", + "@id": "skos:relatedMatch" + }, + "required": { + "@type": "xsd:boolean" + }, + "see_also": { + "@type": "@id", + "@id": "rdfs:seeAlso" + }, + "singular_name": { + "@id": "skos:altLabel" + }, + "slots": { + "@type": "@id" + }, + "slot_uri": { + "@type": "@id" + }, + "slot_usage": { + "@type": "@id" + }, + "source_file_date": { + "@type": "xsd:dateTime" + }, + "source_file_size": { + "@type": "xsd:integer" + }, + "status": { + "@type": "@id", + "@id": "bibo:status" + }, + "subclass_of": { + "@type": "@id", + "@id": "rdfs:subClassOf" + }, + "subproperty_of": { + "@type": "@id", + "@id": "rdfs:subPropertyOf" + }, + "subsets": { + "@type": "@id" + }, + "symmetric": { + "@type": "xsd:boolean" + }, + "text": "@id", + "title": { + "@id": "dcterms:title" + }, + "tree_root": { + "@type": "xsd:boolean" + }, + "uri": { + "@type": "@id" + }, + "typeof": { + "@type": "@id" + }, + "types": { + "@type": "@id" + }, + "union_of": { + "@type": "@id" + }, + "value": { + "@id": "skos:example" + }, + "values_from": { + "@type": "@id" + }, + "version": { + "@id": "pav:version" + } + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/types.context.jsonld b/linkml_runtime/linkml_model/jsonld/types.context.jsonld new file mode 100644 index 00000000..eb45e62e --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/types.context.jsonld @@ -0,0 +1,10 @@ +{ + "_comments": "Auto generated from types.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: types\n \n id: https://w3id.org/linkml/types\n description: Shared type definitions for the core LinkML mode and metamodel\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "linkml": "https://w3id.org/linkml/", + "shex": "http://www.w3.org/ns/shex#", + "xsd": "http://www.w3.org/2001/XMLSchema#", + "@vocab": "https://w3id.org/linkml/" + } +} + diff --git a/linkml_runtime/linkml_model/jsonld/types.model.context.jsonld b/linkml_runtime/linkml_model/jsonld/types.model.context.jsonld new file mode 100644 index 00000000..eb45e62e --- /dev/null +++ b/linkml_runtime/linkml_model/jsonld/types.model.context.jsonld @@ -0,0 +1,10 @@ +{ + "_comments": "Auto generated from types.yaml by jsonldcontextgen.py version: 0.1.1\n Generation date: 2021-05-10 17:12\n Schema: types\n \n id: https://w3id.org/linkml/types\n description: Shared type definitions for the core LinkML mode and metamodel\n license: https://creativecommons.org/publicdomain/zero/1.0/\n ", + "@context": { + "linkml": "https://w3id.org/linkml/", + "shex": "http://www.w3.org/ns/shex#", + "xsd": "http://www.w3.org/2001/XMLSchema#", + "@vocab": "https://w3id.org/linkml/" + } +} +