From a94b2b88ce236e8fe1dcb596a391c17048963d2f Mon Sep 17 00:00:00 2001 From: Alistair Miles Date: Wed, 11 Sep 2024 15:38:22 +0100 Subject: [PATCH 1/6] add local run script --- local.sh | 8 ++++++++ 1 file changed, 8 insertions(+) create mode 100755 local.sh diff --git a/local.sh b/local.sh new file mode 100755 index 0000000..b977006 --- /dev/null +++ b/local.sh @@ -0,0 +1,8 @@ +#!/bin/bash + +set -xeuo pipefail + +# https://github.com/guard/listen/blob/master/README.md#adapter-warnings +export LISTEN_GEM_ADAPTER_WARN_BEHAVIOR=silent + +bundle exec jekyll serve From 2f27691068f81d547dd68fdbf7ef2f8bbc38a748 Mon Sep 17 00:00:00 2001 From: Alistair Miles Date: Wed, 11 Sep 2024 15:38:34 +0100 Subject: [PATCH 2/6] add post for romero et al 2024 --- _posts/2024-09-03-romero.md | 8 ++++++++ 1 file changed, 8 insertions(+) create mode 100644 _posts/2024-09-03-romero.md diff --git a/_posts/2024-09-03-romero.md b/_posts/2024-09-03-romero.md new file mode 100644 index 0000000..8acda96 --- /dev/null +++ b/_posts/2024-09-03-romero.md @@ -0,0 +1,8 @@ +--- +layout: post +title: "Romero et al. 2024 - Mitochondrial Variation in Anopheles gambiae and Anopheles coluzzii: Phylogeographic Legacy and Mitonuclear Associations With Metabolic Resistance to Pathogens and Insecticides" +tags: research +--- + +Romero et al. (2024) [Mitochondrial Variation in Anopheles gambiae and Anopheles coluzzii: Phylogeographic Legacy and Mitonuclear Associations With Metabolic Resistance to Pathogens and Insecticides](https://doi.org/10.1093/gbe/evae172) was published +in Genome Biology and Evolution. From 4d5d7c5495b8564b7596e1b084f07c01cda62d2e Mon Sep 17 00:00:00 2001 From: Alistair Miles Date: Wed, 11 Sep 2024 15:40:46 +0100 Subject: [PATCH 3/6] add post for caputo et al 2024 --- _posts/2024-09-10-caputo.md | 7 +++++++ 1 file changed, 7 insertions(+) create mode 100644 _posts/2024-09-10-caputo.md diff --git a/_posts/2024-09-10-caputo.md b/_posts/2024-09-10-caputo.md new file mode 100644 index 0000000..ba0c967 --- /dev/null +++ b/_posts/2024-09-10-caputo.md @@ -0,0 +1,7 @@ +--- +layout: post +title: "Caputo et al. 2024 - Population genomic evidence of a putative ‘far-west’ African cryptic taxon in the Anopheles gambiae complex" +tags: research +--- + +Caputo et al. (2024) [Population genomic evidence of a putative ‘far-west’ African cryptic taxon in the Anopheles gambiae complex](https://doi.org/10.1038/s42003-024-06809-y) was published in Nature Communications Biology. From dee151c19fd3e7d8bec94a47cc4524cbfe9adec3 Mon Sep 17 00:00:00 2001 From: Alistair Miles Date: Wed, 11 Sep 2024 15:45:51 +0100 Subject: [PATCH 4/6] add test action --- .github/workflows/tests.yml | 12 ++++++++++++ 1 file changed, 12 insertions(+) create mode 100644 .github/workflows/tests.yml diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml new file mode 100644 index 0000000..2d0e5d7 --- /dev/null +++ b/.github/workflows/tests.yml @@ -0,0 +1,12 @@ +name: My workflow +on: [push, pull_request] +jobs: + test: + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@v4 + - uses: ruby/setup-ruby@v1 + with: + ruby-version: '3.3.4' # Not needed with a `.ruby-version` or `.tool-versions` + bundler-cache: true # runs 'bundle install' and caches installed gems automatically + - run: bundle exec jekyll serve \ No newline at end of file From d4e6260792f7a602f40d3465c5929f79ca10449f Mon Sep 17 00:00:00 2001 From: Alistair Miles Date: Wed, 11 Sep 2024 15:46:28 +0100 Subject: [PATCH 5/6] only run on pr --- .github/workflows/tests.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 2d0e5d7..2484a7f 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -1,5 +1,5 @@ name: My workflow -on: [push, pull_request] +on: [pull_request] jobs: test: runs-on: ubuntu-latest From 4f3fc39dbbef61f58f9f6a76b78f2f6e29ab6c74 Mon Sep 17 00:00:00 2001 From: Alistair Miles Date: Wed, 11 Sep 2024 15:47:55 +0100 Subject: [PATCH 6/6] build not serve --- .github/workflows/tests.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 2484a7f..44d0dfd 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -9,4 +9,4 @@ jobs: with: ruby-version: '3.3.4' # Not needed with a `.ruby-version` or `.tool-versions` bundler-cache: true # runs 'bundle install' and caches installed gems automatically - - run: bundle exec jekyll serve \ No newline at end of file + - run: bundle exec jekyll build \ No newline at end of file