diff --git a/conf/binac.config b/conf/binac.config index 919d35eb..1691da88 100644 --- a/conf/binac.config +++ b/conf/binac.config @@ -1,17 +1,17 @@ //Profile config names for nf-core/configs params { - config_profile_description = 'BINAC cluster profile provided by nf-core/configs.' - config_profile_contact = 'Alexander Peltzer (@apeltzer)' - config_profile_url = 'https://www.bwhpc-c5.de/wiki/index.php/Category:BwForCluster_BinAC' + config_profile_name = 'binac' + config_profile_description = 'BinAC cluster profile provided by nf-core/configs.' + config_profile_contact = 'Felix Bartusch (@fbartusch)' + config_profile_url = 'https://wiki.bwhpc.de/e/BinAC' } singularity { enabled = true - envWhitelist = 'TZ' + cacheDir = '/beegfs/work/container/apptainer_cache' } process { - beforeScript = 'module load devel/singularity/3.4.2' executor = 'pbs' queue = { task.memory >= 128.GB ? 'smp': task.time <= 20.m ? 'tiny' : task.time > 48.h ? 'long' : 'short'} } @@ -22,8 +22,3 @@ params { max_cpus = 28 max_time = 168.h } - -weblog{ - enabled = true - url = 'https://services.qbic.uni-tuebingen.de/flowstore/workflows' -} diff --git a/pipeline/troughgraph.config b/pipeline/troughgraph.config new file mode 100644 index 00000000..40468c90 --- /dev/null +++ b/pipeline/troughgraph.config @@ -0,0 +1,12 @@ +/* +* ------------------------------------------------- +* nfcore/troughgraph custom profile Nextflow config file +* ------------------------------------------------- +* Config options for custom environments. +* Cluster-specific config options should be saved +* in the conf/pipeline/troughgraph folder and imported +* under a profile name here. +*/ + +profiles { +}