From ba0431b856ba55e6dec738ba0e592ed3bafeedf8 Mon Sep 17 00:00:00 2001 From: baldikacti Date: Fri, 20 Dec 2024 05:35:32 +0000 Subject: [PATCH] Fixes lint errors --- conf/unity.config | 40 ++++++++++++++++++++-------------------- 1 file changed, 20 insertions(+), 20 deletions(-) diff --git a/conf/unity.config b/conf/unity.config index 7dfaa86e..4ca141f2 100644 --- a/conf/unity.config +++ b/conf/unity.config @@ -6,39 +6,39 @@ */ params { - config_profile_description = 'Unity HPC cluster profile provided by nf-core/configs.' - config_profile_contact = 'Berent Aldikacti (@baldikacti)' - config_profile_url = 'https://unity.rc.umass.edu/' + config_profile_description = 'Unity HPC cluster profile provided by nf-core/configs.' + config_profile_contact = 'Berent Aldikacti (@baldikacti)' + config_profile_url = 'https://unity.rc.umass.edu/' - igenomes_base = '/datasets/bio/igenomes' + igenomes_base = '/datasets/bio/igenomes' - max_memory = 2.TB - max_cpus = 192 - max_time = 14.d + max_memory = 2.TB + max_cpus = 192 + max_time = 14.d } process { - resourceLimits = [ - cpus: 192, - memory: 2.TB, - time: 14.d - ] - executor = 'slurm' + resourceLimits = [ + cpus: 192, + memory: 2.TB, + time: 14.d + ] + executor = 'slurm' // Selects partition based on process time - queue = { task.time <= 2.h ? 'cpu-preempt' : 'cpu' } - clusterOptions = { "${task.time >= 48.h ? '-q long' : ''}" } + queue = { task.time <= 2.h ? 'cpu-preempt' : 'cpu' } + clusterOptions = { "${task.time >= 48.h ? '-q long' : ''}" } - maxRetries = 2 + maxRetries = 2 } // Limits job submission to 1000 consecutive run and 20 submissions per second executor { - queueSize = 1000 - submitRateLimit = '20sec' - pollInterval = '30sec' - queueStatInterval = '1min' + queueSize = 1000 + submitRateLimit = '20sec' + pollInterval = '30sec' + queueStatInterval = '1min' } apptainer {