v0.5.0rc1

README: add pytest gh actions badge

v0.4.1

Pin bioframe dependency to prepare for breaking changes in bioframe.

v0.4.0

Maintenance

• Make saddle strength work with NaNs
• Add output option to diamond-insulation
• Upgrade bioframe dependency
• Parallelize random sampling
• Various compatibility fixes to expected, saddle and snipping and elsewhere to work with standard formats for "expected" and "regions": #217

New features

• New dataset download API
• New functionality for smoothing P(s) and derivatives (API is not yet stable): logbin_expected, interpolate_expected

v0.4.0rc1

Date: 2021-04-05

Maintenance

• Make saddle strength work with NaNs
• Add output option to diamond-insulation
• Upgrade bioframe dependency
• Parallelize random sampling
• Various compatibility fixes to expected, saddle and snipping and elsewhere to work with standard formats for "expected" and "regions": #217

New features

• New dataset download API
• New functionality for smoothing P(s) and derivatives (API is not yet stable): logbin_expected, interpolate_expected

v0.3.2

Updates and bug fixes

• Error checking for vmin/vmax in compute-saddle
• Various updates and fixes to expected and dot-caller code

Project health

• Added docs on RTD, tutorial notebooks, code formatting, linting, and contribution guidelines.

v0.3.1

Zenodo DOI minted

v0.3.0

• Several library utilities added: plotting.gridspec_inches, adaptive_coarsegrain, singleton interpolation, and colormaps.

• New tools: cooltools sample for random downsampling, cooltools coverage for marginalization.

• compute-saddle now saves saddledata without transformation, and the scale argument (with options log or linear) now only determines how the saddle is plotted. Consequently, saddleplot function now expects untransformed saddledata, and plots it directly or with log-scaling of the colormap. (#105)

v0.2.0

New tagged release for DCIC. Many updates, including more memory-efficient insulation score calling. Next release should include docs.

v0.1.0

First official release.