The Dynamics and Neural Systems Group, The University of Sydney

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18 repositories

catch22
Public
catch22: CAnonical Time-series CHaracteristics
time-series feature-extraction time-series-analysis
C
•
GNU General Public License v3.0
•69•381•11•1•Updated Jan 11, 2025Jan 11, 2025
DynamicsAndNeuralSystems.github.io
Public
SCSS
•1.2k•0•0•1•Updated Jan 8, 2025Jan 8, 2025
fMRI_FeaturesDisorders
Public
Code and data to reproduce Bryant et al. 2024 preprint "Extracting interpretable signatures of whole-brain dynamics through systematic comparison"
Jupyter Notebook
•1•4•1•0•Updated Dec 9, 2024Dec 9, 2024
pycatch22
Public
python implementation of catch22
C
•
GNU General Public License v3.0
•16•76•2•2•Updated Sep 4, 2024Sep 4, 2024
pyspi
Public
Comparative analysis of pairwise interactions in multivariate time series.
time-series complex-networks complex-systems multivariate-analysis time-series-analysis multivariate-timeseries pairwise-interactions
Python
•
GNU General Public License v3.0
•27•212•8•0•Updated Aug 27, 2024Aug 27, 2024
catchaMouse16
Public
catchaMouse16: CAnonical Time-series CHaracteristics for Mouse fMRI
time-series-analysis fmri-analysis mouse-fmri
C
•
GNU General Public License v3.0
•3•15•0•1•Updated Jul 29, 2024Jul 29, 2024
Catchamouse16_paper_code
Public
Compute set of important operations for HCTSA code
MATLAB
•10•0•0•0•Updated Jul 15, 2024Jul 15, 2024
pinup_paper
Public
Code to reproduce figure 3 of the PINUP paper
Jupyter Notebook
•1•6•0•0•Updated Jul 11, 2024Jul 11, 2024
RAD
Public
Code for RAD in your favourite language
Python
•
MIT License
•0•2•0•0•Updated Jul 5, 2024Jul 5, 2024
pyspi-distribute
Public
Simple scripts for submitting multiple parallel jobs to a HPC (using PBS)
Python
•2•0•0•0•Updated Feb 16, 2024Feb 16, 2024
pyspi_tmp
Public archive
Comparative analysis of pairwise interactions in multivariate time series.
Python
•
GNU General Public License v3.0
•27•13•0•1•Updated Nov 12, 2023Nov 12, 2023
Directed_information_fMRI
Public
Jupyter Notebook
•0•0•0•0•Updated Aug 15, 2023Aug 15, 2023
pyspi_paper_code
Public
All code to download datasets for the three classification case studies, compute SPIs, fit SVMs, and visualise results for pyspi publication
HTML
•1•10•0•0•Updated Aug 14, 2023Aug 14, 2023
MouseBrainModelling
Public
Honours Project
Jupyter Notebook
•3•1•0•0•Updated Apr 8, 2022Apr 8, 2022
Comp-Engine-Features
Public
Python
•
GNU General Public License v3.0
•1•2•1•1•Updated Aug 23, 2021Aug 23, 2021
humanStructureFunction
Public
Analysis code for connecting time-series properties of BOLD dynamics to connectivity properties using human fMRI and DWI data from HCP
connectomics time-series-analysis neuroimaging-analysis
MATLAB
•3•4•0•0•Updated Aug 11, 2021Aug 11, 2021
DevelopingMouse
Public
MATLAB
•0•2•0•0•Updated Mar 19, 2021Mar 19, 2021
DevelopmentalExpressionModeling
Public
MATLAB
•0•1•0•0•Updated Jul 29, 2020Jul 29, 2020