You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
When an entry is added to or removed from units.tsv, this should prompt a rerun of the whole workflow, at least from rules sleuth_init and compose_samplesheet onward. This is currently not the case.
This is might be caused by the compose_sample_sheet rule, which assembles a sample sheet for sleuth from the output of kallisto and the samples file. It is possible that changes to the units file are not properly propagated to this rule. It might be enough, to add units.tsv as an input for this rule.
Another potential point of failure could be the checkpoint sleuth_diffexp.
The text was updated successfully, but these errors were encountered:
When an entry is added to or removed from
units.tsv
, this should prompt a rerun of the whole workflow, at least from rulessleuth_init
andcompose_samplesheet
onward. This is currently not the case.This is might be caused by the
compose_sample_sheet
rule, which assembles a sample sheet for sleuth from the output of kallisto and the samples file. It is possible that changes to the units file are not properly propagated to this rule. It might be enough, to addunits.tsv
as an input for this rule.Another potential point of failure could be the checkpoint
sleuth_diffexp
.The text was updated successfully, but these errors were encountered: