config.xml

<?xml version = "1.0" encoding = "UTF-8"?>

<launch>
  <systemProperties>
    <property name="file.encoding" value="utf-8"/>
    <property name="apple.laf.useScreenMenuBar" value="true"/>
    <property name="com.apple.mrj.application.growbox.intrudes" value="true"/>
    <property name="org.protege.plugin.dir" value="plugins"/>
  </systemProperties>
  <frameworkProperties>
    <property name="org.osgi.framework.bootdelegation" value="sun.*,com.sun.*,apple.*,com.apple.*"/>
    <property name="org.osgi.framework.system.packages.extra" 
              value="javax.xml.parsers,org.xml.sax,org.xml.sax.ext,org.xml.sax.helpers"/>
    <property name="org.osgi.framework.storage.clean" 
              value="onFirstInit"/>
    <property name="org.osgi.service.http.port" value="8081"/>

    <property name="org.osgi.framework.system.packages.extra" 
              value="javax.xml.parsers,org.xml.sax,org.xml.sax.ext,org.xml.sax.helpers,javafx.collections,javafx.embed.swing,javafx.geometry,javafx.scene,javafx.scene.text,javafx.scene.layout,javafx.scene.paint,javafx.scene.web,javafx.application,javafx.beans.property,javafx.beans.value"/>  
</frameworkProperties>
  <!--
  We need to start things at different levels.
  Protege common needs starting first because it sets up the required XML parsing machinery.  Without this
  The equinox stuff fails.
   -->
  <bundles>
    <search path="bundles"/>
    <search path="${user.home}/.Protege/bundles"/>
    <!-- Just start the org.protege.common bundle here -->
    <bundle name="protege-common.jar"/>
  </bundles>
  <bundles>
    <search path="bundles"/>
    <search path="${user.home}/.Protege/bundles"/>
    <!-- Just start the eclipse equinox framework here -->
    <bundle name="org.eclipse.equinox.common.jar"/>
    <bundle name="org.eclipse.equinox.supplement.jar"/>
  </bundles>
  <bundles>
    <search path="bundles"/>
    <search path="${user.home}/.Protege/bundles"/>
    <bundle name="org.eclipse.equinox.registry.jar"/>
    <bundle name="org.protege.jaxb.jar"/>
    <bundle name="protege-editor-core.jar"/>
  </bundles>
  <!-- Start everything else -->
  <bundles>
  	<search path="bundles"/>
  	<search path="${user.home}/.Protege/bundles"/>
  </bundles>
<bundles>
  	<search path="plugins"/>
  	<search path="${user.home}/.Protege/plugins"/>
  </bundles>

</launch>