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reactions.yaml
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- id: 12DCAt
name: 1,2-Dichloroethane transport
equation: 12dca[e] <=> 12dca[c]
subsystem: Transport
- id: 12DECAD1
name: 1,2-Dichloroethane cobalamin declorination 1
equation: 5hbc_red[c] + 12dca[c] => cl[c] + cethcblhbi[c]
subsystem: Declorination
- id: 12DECAD2a
name: 1,2-Dichloroethane cobalamin declorination 2a
equation: h[c] + cethcblhbi[c] => ceth[c] + 5hbc_ox[c]
subsystem: Declorination
- id: 12DECAD2b
name: 1,2-Dichloroethane cobalamin declorination 2b
equation: cethcblhbi[c] => cl[c] + ethy[c] + 5hbc_ox[c]
subsystem: Declorination
- id: 12DF430D1
name: 1,2-Dichloroethane F430 declorination 1
equation: f430[c] + fdred[c] + 12dca[c] => cl[c] + fdox[c] + cethf430[c]
subsystem: Declorination
- id: 12DF430D2a
name: 1,2-Dichloroethane F430 declorination 2a
equation: cethf430[c] => cl[c] + ethy[c] + f430_ox[c]
subsystem: Declorination
- id: 12DF430D2b
name: 1,2-Dichloroethane F430 declorination 2b
equation: h[c] + cethf430[c] => ceth[c] + f430_ox[c]
subsystem: Declorination
- id: 2H3MOAOX
name: (R)-2,3-Dihydroxy-3-methylbutanoate:NADP+ oxidoreductase
genes: Mbar_A0220
equation: 23dhmb[c] + nadp[c] <=> h[c] + nadph[c] + 2h3moa[c]
subsystem: Valine Leucine and Isoleucine Metabolism
- id: 2MOPRED
name: (S)-Methylmalonate semialdehyde:NAD+ oxidoreductase
genes: Mbar_A2387
equation: h2o[c] + nad[c] + 2mop[c] <=> (2) h[c] + nadh[c] + mmal[c]
subsystem: Valine Leucine and Isoleucine Metabolism
- id: 2OBUTHE2THPPTRX
name: (S)-2-Aceto-2-hydroxybutanoate pyruvate-lyase (carboxylating)
genes: ( Mbar_A0218 or Mbar_A0428 or Mbar_A0438 or Mbar_A2541 ) and ( Mbar_A0210
or Mbar_A0219 )
equation: 2obut[c] + he2thpp[c] <=> 2ahbut[c] + thmpp[c]
subsystem: Valine Leucine and Isoleucine Metabolism
- id: 2PLS
name: 2 phospho L lactate synthase
equation: gtp[c] + lac-L[c] => 2plac-L[c] + gdp[c] + h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: 3H3MOPI
name: (S)-2-Aceto-2-hydroxybutanoate:NADP+ oxidoreductase (isomerizing)
genes: Mbar_A0220
equation: 3h3mop[c] <=> 2ahbut[c]
subsystem: Valine Leucine and Isoleucine Metabolism
- id: 3H3MOPOX
name: (R)-2,3-Dihydroxy-3-methylpentanoate:NADP+ oxidoreductase
genes: Mbar_A0220
equation: 23dhmp[c] + nadp[c] <=> h[c] + nadph[c] + 3h3mop[c]
subsystem: Valine Leucine and Isoleucine Metabolism
- id: 4ABZt2r
name: 4 Aminobenzoate mitochondrial transport via symport
equation: 4abz[e] + h[e] <=> 4abz[c] + h[c]
subsystem: Transport
- id: 5HBCOX
name: 5-hydroxybenzimidazolylcobamide oxidation
equation: (2) h[c] + (2) 5hbc_red[c] => h2[c] + (2) 5hbc[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: 5HBCR
name: 5-hydroxybenzimidazolylcobamide reduction
genes: Mbar_A0672 or Mbar_A0840 or Mbar_A1055 or Mbar_A3583
equation: atp[c] + fdred[c] + h2o[c] + 5hbc[c] => adp[c] + fdox[c] + h[c] + pi[c]
+ 5hbc_red[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: 5HBCR2
name: 5-hydroxybenzimidazolylcobamide oxidized coblat reduction
genes: Mbar_A0672 or Mbar_A0840 or Mbar_A1055 or Mbar_A3583
equation: atp[c] + fdred[c] + h2o[c] + 5hbc_ox[c] => adp[c] + fdox[c] + h[c] +
pi[c] + 5hbc[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: 5HBZIDS
name: 5 hydroxybenzimidazole synthase
equation: ribflv[c] => 5hbzid[c] + unknown-rbfdeg[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: 7MHS
name: 7 mercaptoheptanoate synthase
equation: 7ohp[c] + cys-L[c] + h[c] + nadh[c] => 7mhp[c] + nad[c] + ser-L[c]
subsystem: Coenzyme B Biosynthesis
- id: 7MHTS
name: 7 mercaptoheptanoylthreonine synthase
equation: 7mhp[c] + atp[c] + thr-L[c] => 7mht[c] + adp[c] + h[c] + pi[c]
subsystem: Coenzyme B Biosynthesis
- id: ABTA
name: 4 aminobutyrate transaminase
genes: Mbar_A2386
equation: 4abut[c] + akg[c] => glu-L[c] + sucsal[c]
subsystem: Glutamate metabolism
- id: ACACT1
name: acetyl CoA C acetyltransferase
genes: Mbar_A0550
equation: (2) accoa[c] => aacoa[c] + coa[c]
subsystem: Lipid Cell Wall Metabolism
- id: ACBIPGT
name: Adenosyl cobinamide phosphate guanyltransferase
genes: Mbar_A3457
equation: adocbip[c] + gtp[c] + h[c] => agdpcbi[c] + ppi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ACGK
name: acetylglutamate kinase
genes: Mbar_A1181
equation: acglu[c] + atp[c] => acg5p[c] + adp[c]
subsystem: Amino Acid Metabolism
- id: ACGS
name: N acetylglutamate synthase
genes: Mbar_A0723 or Mbar_A0587 or Mbar_A2003
equation: accoa[c] + glu-L[c] => acglu[c] + coa[c] + h[c]
subsystem: Amino Acid Metabolism
- id: ACKr
name: acetate kinase
genes: Mbar_A1820
equation: ac[c] + atp[c] <=> actp[c] + adp[c]
subsystem: Methanogenesis
- id: ACLDC
name: acetolactate decarboxylase
genes: Mbar_A2915 or Mbar_A2916
equation: alac-S[c] + h[c] => actn-R[c] + co2[c]
subsystem: Other
- id: ACLS
name: acetolactate synthase
genes: ( Mbar_A0210 or Mbar_A0219 ) and ( Mbar_A0218 or Mbar_A0428 or Mbar_A0438
or Mbar_A2541 )
equation: h[c] + (2) pyr[c] => alac-S[c] + co2[c]
subsystem: Valine Leucine and Isoleucine Metabolism
- id: ACONMT
name: Trans aconitate methyltransferase
genes: Mbar_A2906
equation: acon-T[c] + amet[c] => aconm[c] + ahcys[c]
subsystem: Central Metabolism
- id: ACONTa
name: citrate hydro-lyase (cis-aconitate-forming)
genes: Mbar_A0714 or ( Mbar_A0244 and Mbar_A1961 )
equation: cit[c] <=> h2o[c] + acon-C[c]
subsystem: Citric Acid Cycle
- id: ACONTb
name: isocitrate hydro-lyase (cis-aconitate-forming)
genes: Mbar_A0714 or ( Mbar_A0244 and Mbar_A1961 )
equation: icit[c] <=> h2o[c] + acon-C[c]
subsystem: Citric Acid Cycle
- id: ACOTA
name: acetylornithine transaminase
genes: Mbar_A0871 or Mbar_A2386 or Mbar_A3279
equation: acorn[c] + akg[c] <=> acg5sa[c] + glu-L[c]
subsystem: Amino Acid Metabolism
- id: ACP1(FMN)
name: 'acid phosphatase FMN '
genes: Mbar_A1192
equation: fmn[c] + h2o[c] => pi[c] + ribflv[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ACSERHS
name: O3-Acetyl-L-serine acetate-lyase (adding hydrogen sulfide)
genes: Mbar_A2422 or Mbar_A2427
equation: acser[c] + trdrd[c] + tsul[c] => ac[c] + cys-L[c] + h[c] + so3[c] + trdox[c]
subsystem: Amino Acid Metabolism
- id: ACTNt2r
name: ' R acetoin transport via proton symport'
equation: actn-R[e] + h[e] <=> actn-R[c] + h[c]
subsystem: Transport
- id: ACYP
name: acylphosphatase
genes: Mbar_A3282
equation: 13dpg[c] + h2o[c] => 3pg[c] + h[c] + pi[c]
subsystem: GlycolysisGluconeogenesis
- id: ACYP_2
name: 'acylphosphatase 2 '
genes: Mbar_A3282
equation: actp[c] + h2o[c] => ac[c] + h[c] + pi[c]
subsystem: Central Metabolism
- id: ACt3r
name: Acetate carbonate antiporter
equation: ac[e] + hco3[c] <=> ac[c] + hco3[e]
subsystem: Transport
- id: ADCBHBIR
name: Adenosylcobalamin-HBI reductase
equation: adocblhbi[c] + h2o[c] => adn[c] + h[c] + 5hbc_red[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ADCPS1
name: adenosylcobyric acid:(R)-1-aminopropan-2-ol ligase (ADP-forming)
genes: Mbar_A3454
equation: adcobhex[c] + appl[c] + atp[c] <=> adocbi[c] + adp[c] + h[c] + pi[c]
subsystem: Other
- id: ADCPS2
name: adenosylcobinamide phosphate synthase
genes: Mbar_A3454
equation: adcobhex[c] + applp[c] + atp[c] => adocbip[c] + adp[c] + h[c] + pi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ADCYRS
name: 'adenosylcobyric acid synthase glutamine hydrolysing '
genes: Mbar_A3191
equation: adcobdam[c] + (4) atp[c] + (4) gln-L[c] + (4) h2o[c] => adcobhex[c] +
(4) adp[c] + (4) glu-L[c] + (4) h[c] + (4) pi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ADD
name: adenine deaminase
genes: Mbar_A3342
equation: ade[c] + h2o[c] + h[c] => hxan[c] + nh4[c]
subsystem: Nucleotide Metabolism
- id: ADK1
name: adenylate kinase
genes: Mbar_A0086
equation: amp[c] + atp[c] <=> (2) adp[c]
subsystem: Nucleotide Metabolism
- id: ADK2
name: 'adenylate kinase Inorganic triphosphate '
genes: Mbar_A0086
equation: amp[c] + pppi[c] <=> adp[c] + ppi[c]
subsystem: Nucleotide Metabolism
- id: ADK3
name: 'adentylate kinase GTP '
genes: Mbar_A0086
equation: amp[c] + gtp[c] <=> adp[c] + gdp[c]
subsystem: Nucleotide Metabolism
- id: ADK4
name: 'adentylate kinase ITP '
genes: Mbar_A0086
equation: amp[c] + itp[c] <=> adp[c] + idp[c]
subsystem: Nucleotide Metabolism
- id: ADKd
name: 'adenylate kinase d form '
genes: Mbar_A0086
equation: damp[c] + datp[c] <=> (2) dadp[c]
subsystem: Nucleotide Metabolism
- id: ADNCYC
name: adenylate cyclase
genes: Mbar_A0548
equation: atp[c] => camp[c] + ppi[c]
subsystem: Nucleotide Metabolism
- id: ADNK1
name: adenosine kinase
genes: Mbar_A0086
equation: adn[c] + atp[c] => adp[c] + amp[c] + h[c]
subsystem: Nucleotide Metabolism
- id: ADOCBIAH
name: Adenosyl cobinamide amidohydrolase
genes: Mbar_A3636
equation: adocbi[c] + h2o[c] => adcobhex[c] + appl[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ADOCBLS2
name: Adenosylcobalamin 5 phosphate synthase
genes: Mbar_A3456
equation: agdpcbi[c] + r5hbzi[c] => adocblhbi[c] + gmp[c] + h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ADPRDP
name: ADPribose hydrolase
genes: Mbar_A0887
equation: h2o[c] + adprib[c] => amp[c] + (2) h[c] + r5p[c]
subsystem: Central Metabolism
- id: ADPT
name: adenine phosphoribosyltransferase
genes: Mbar_A1633
equation: ade[c] + prpp[c] => amp[c] + ppi[c]
subsystem: Nucleotide Metabolism
- id: ADSK
name: adenylyl-sulfate kinase
genes: Mbar_A0634
equation: atp[c] + aps[c] => adp[c] + h[c] + paps[c]
subsystem: Cysteine Metabolism
- id: ADSL1
name: adenylosuccinate lyase
genes: Mbar_A0673
equation: dcamp[c] => amp[c] + fum[c]
subsystem: Alanine and Aspartate Metabolism
- id: ADSL2
name: adenylosuccinate lyase
genes: Mbar_A0673
equation: 25aics[c] => aicar[c] + fum[c]
subsystem: Nucleotide Metabolism
- id: ADSS
name: adenylosuccinate synthase
genes: Mbar_A0403
equation: asp-L[c] + gtp[c] + imp[c] => dcamp[c] + gdp[c] + (2) h[c] + pi[c]
subsystem: Alanine and Aspartate Metabolism
- id: AGAIAGT
name: archaeatidylinositol N acetylglucosaminyltransferase
genes: Mbar_A1731
equation: dpgpi[c] + uacgam[c] => agdpgpi[c] + h[c] + udp[c]
subsystem: Lipid Cell Wall Metabolism
- id: AGAID
name: N acetylglucosaminylarchaeatidylinositol deacetylase
genes: Mbar_A0408
equation: agdpgpi[c] + h2o[c] => ac[c] + gdpgpi[c]
subsystem: Lipid Cell Wall Metabolism
- id: AGMT
name: agmatinase
genes: Mbar_A0694
equation: agm[c] + h2o[c] => ptrc[c] + urea[c]
subsystem: Arginine and Proline Metabolism
- id: AGPR
name: N acetyl g glutamyl phosphate reductase
genes: Mbar_A2001
equation: acg5sa[c] + nadp[c] + pi[c] <=> acg5p[c] + h[c] + nadph[c]
subsystem: Amino Acid Metabolism
- id: AH6PI
name: Arabino-3-hexulose-6-P Isomerase
genes: Mbar_A3132
equation: ah6p-D[c] <=> f6p[c]
subsystem: Central Metabolism
- id: AHC
name: adenosylhomocysteinase
genes: Mbar_A3251
equation: ahcys[c] + h2o[c] <=> adn[c] + hcys-L[c]
subsystem: Methionine Metabolism
- id: AHGDx
name: ' S alpha hydroxyglutarate dehydrogenase'
equation: S2hglut[c] + nad[c] <=> akg[c] + h[c] + nadh[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: AHMMPS
name: 4 amino 5 hydroxymethyl 2 methylpyrimidine synthetase
genes: Mbar_A0597 or Mbar_A2129
equation: air[c] + (2) h[c] + nadh[c] => 4ahmmp[c] + gcald[c] + nad[c] + pi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: AHSERL2
name: O acetylhomoserine thiol lyase
genes: Mbar_A2427
equation: achms[c] + h2s[c] => ac[c] + h[c] + hcys-L[c]
subsystem: Methionine Metabolism
- id: AHXDH
name: 6 aminohexanoate dimer hydrolase
genes: Mbar_A1202
equation: 6ax6ax[c] + h2o[c] => (2) 6ax[c]
subsystem: Other
- id: AICART
name: phosphoribosylaminoimidazolecarboxamide formyltransferase
genes: Mbar_A0571
equation: 10fthf[c] + aicar[c] <=> fprica[c] + thf[c]
subsystem: Nucleotide Metabolism
- id: AIRC2
name: phosphoribosylaminoimidazole carboxylase
genes: Mbar_A3125 or Mbar_A0762 or Mbar_A3291
equation: air[c] + atp[c] + hco3[c] => 5caiz[c] + adp[c] + h[c] + pi[c]
subsystem: Nucleotide Metabolism
- id: AIRC3
name: 'phosphoribosylaminoimidazole carboxylase mutase rxn '
genes: Mbar_A3125 or Mbar_A0762 or Mbar_A3291
equation: 5aizc[c] <=> 5caiz[c]
subsystem: Nucleotide Metabolism
- id: AKACAL
name: alpha ketoadipateCoA ligase
genes: Mbar_A0942 or Mbar_A2192
equation: accoa[c] + h2o[c] + ohexa[c] => Rh2cit[c] + coa[c] + h[c]
subsystem: Coenzyme B Biosynthesis
- id: AKGCAL
name: alpha ketoglutarateCoA ligase
genes: Mbar_A0942 or Mbar_A2192
equation: accoa[c] + akg[c] => coa[c] + h[c] + hacon-T[c]
subsystem: Coenzyme B Biosynthesis
- id: AKP1
name: 'alkaline phosphatase Dihydroneopterin '
genes: Mbar_A1231
equation: ahdt[c] + (3) h2o[c] => dhnpt[c] + (2) h[c] + (3) pi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: AKPCAL
name: alpha ketopimelateCoA ligase
genes: Mbar_A0942 or Mbar_A2192
equation: accoa[c] + h2o[c] + ohepa[c] => Rh3cit[c] + coa[c] + h[c]
subsystem: Coenzyme B Biosynthesis
- id: AKSCAL
name: alpha ketosubmerateCoA ligase
equation: 2ood[c] + accoa[c] + h2o[c] => glyc-R[c] + pmcoa[c]
subsystem: Coenzyme B Biosynthesis
- id: AKSDC
name: alpha ketosubmerate decarboxylase
equation: 2ood[c] + h[c] => 7ohp[c] + co2[c]
subsystem: Coenzyme B Biosynthesis
- id: ALACCBX
name: 2-Acetolactate pyruvate-lyase (carboxylating)
genes: ( Mbar_A0428 or Mbar_A0438 or Mbar_A2541 ) and ( Mbar_A0210 or Mbar_A0219
)
equation: pyr[c] + he2thpp[c] => alac-S[c] + thmpp[c]
subsystem: Valine Leucine and Isoleucine Metabolism
- id: ALACt2r
name: acetolactate reversible transport via proton symport
equation: alac-S[e] + h[e] <=> alac-S[c] + h[c]
subsystem: Transport
- id: ALATA_L
name: L alanine transaminase
genes: Mbar_A2080 or Mbar_A1137
equation: akg[c] + ala-L[c] <=> glu-L[c] + pyr[c]
subsystem: Alanine and Aspartate Metabolism
- id: ALATRS
name: Alanyl tRNA synthetase
genes: Mbar_A1361 or Mbar_A2092
equation: ala-L[c] + atp[c] + trnaala[c] => alatrna[c] + amp[c] + ppi[c]
subsystem: Alanine and Aspartate Metabolism
- id: ALAt4r
name: Alanine Sodium symporter
genes: Mbar_A2656
equation: ala-L[e] + na1[e] <=> ala-L[c] + na1[c]
subsystem: Transport
- id: ALCD19y
name: Glycerol:NADP+ oxidoreductase
genes: Mbar_A0771 or Mbar_A2344
equation: glyald[c] + h[c] + nadph[c] => glyc[c] + nadp[c]
subsystem: Central Metabolism
- id: ALCD1y
name: alcohol dehydrogenase (methanol)
genes: Mbar_A0771
equation: meoh[c] + nadp[c] <=> fald[c] + h[c] + nadph[c]
subsystem: Methanogenesis
- id: ALCD20y
name: 'alcohol dehydrogenase 2 propanol NADP '
genes: Mbar_A0771 or Mbar_A2344
equation: 2ppoh[c] + nadp[c] <=> acetone[c] + h[c] + nadph[c]
subsystem: Central Metabolism
- id: ALCD22_L(f420)
name: Alcohol dehydrogenase (L-lactaldehyde by F420)
equation: f420-2h2[c] + mthgxl[c] <=> f420-2[c] + h[c] + lald-L[c]
subsystem: Central Metabolism
- id: ALCD2y
name: 'alcohol dehydrogenase ethanol NADP '
genes: Mbar_A0771 or Mbar_A2344
equation: etoh[c] + nadp[c] <=> acald[c] + h[c] + nadph[c]
subsystem: Central Metabolism
- id: ALDD1
name: 'aldehyde dehydrogenase formaldehyde NAD '
genes: Mbar_A0774 and Mbar_A0775
equation: fald[c] + h2o[c] + nad[c] => for[c] + (2) h[c] + nadh[c]
subsystem: Central Metabolism
- id: ALDD2x
name: 'aldehyde dehydrogenase acetaldehyde NAD '
genes: Mbar_A2387
equation: acald[c] + h2o[c] + nad[c] => ac[c] + (2) h[c] + nadh[c]
subsystem: Central Metabolism
- id: ALDD31
name: Aminoacetaldehyde oxidation
genes: Mbar_A2387
equation: h2o[c] + nad[c] + aacald[c] => gly[c] + (2) h[c] + nadh[c]
subsystem: Other
- id: ALKP
name: alkaline phosphatase
genes: Mbar_A1231
equation: dhap[c] + h2o[c] => dha[c] + pi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ALR2(f420)
name: Acetol oxidation
genes: Mbar_A0763 or Mbar_A2639 or Mbar_A3350
equation: f420-2h2[c] + mthgxl[c] <=> f420-2[c] + h[c] + acetol[c]
subsystem: Central Metabolism
- id: AMAOTr
name: adenosylmethionine 8 amino 7 oxononanoate transaminase
equation: 8aonn[c] + amet[c] <=> amob[c] + dann[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: AMPMS2
name: 4-amino-2-methyl-5-phosphomethylpyrimidine synthetase
genes: Mbar_A0597 or Mbar_A2129
equation: air[c] + h2o[c] + nad[c] => 4ampm[c] + (2) for[c] + (3) h[c] + nadh[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: AMPTASECG
name: L-cysteinylglycine dipeptidase
genes: Mbar_A2053
equation: h2o[c] + cgly[c] => cys-L[c] + gly[c]
subsystem: Amino Acid Metabolism
- id: ANPRT
name: anthranilate phosphoribosyltransferase
genes: Mbar_A3624
equation: anth[c] + prpp[c] => ppi[c] + pran[c]
subsystem: Tyrosine Tryptophan and Phenylalanine Metabolism
- id: ANS
name: anthranilate synthase
genes: Mbar_A3626 and Mbar_A3627
equation: chor[c] + gln-L[c] => anth[c] + glu-L[c] + h[c] + pyr[c]
subsystem: Tyrosine Tryptophan and Phenylalanine Metabolism
- id: ANS2
name: chorismate pyruvate-lyase (amino-accepting; anthranilate-forming)
genes: Mbar_A3626 and Mbar_A3627
equation: chor[c] + nh4[c] => anth[c] + h2o[c] + h[c] + pyr[c]
subsystem: Tyrosine Tryptophan and Phenylalanine Metabolism
- id: AOXSr
name: 8 amino 7 oxononanoate synthase
equation: ala-L[c] + h[c] + pmcoa[c] <=> 8aonn[c] + co2[c] + coa[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: APPLP
name: aminopropanol phosphorylase
genes: Mbar_A3455
equation: appl[c] + atp[c] => adp[c] + applp[c] + h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ARGDC
name: arginine decarboxylase
genes: Mbar_A2039 or Mbar_A2492
equation: arg-L[c] + h[c] => agm[c] + co2[c]
subsystem: Glutamate metabolism
- id: ARGDr
name: arginine deiminase
genes: Mbar_A1693
equation: arg-L[c] + h2o[c] <=> citr-L[c] + nh4[c]
subsystem: Arginine and Proline Metabolism
- id: ARGSL
name: argininosuccinate lyase
genes: Mbar_A0004
equation: argsuc[c] <=> arg-L[c] + fum[c]
subsystem: Alanine and Aspartate Metabolism
- id: ARGSS
name: argininosuccinate synthase
genes: Mbar_A2373
equation: asp-L[c] + atp[c] + citr-L[c] => amp[c] + argsuc[c] + h[c] + ppi[c]
subsystem: Alanine and Aspartate Metabolism
- id: ARGTRS
name: Arginyl tRNA synthetase
genes: Mbar_A1008
equation: arg-L[c] + atp[c] + trnaarg[c] => amp[c] + argtrna[c] + ppi[c]
subsystem: Arginine and Proline Metabolism
- id: ASADi
name: aspartate semialdehyde dehydrogenase irreversible
genes: Mbar_A0760
equation: 4pasp[c] + h[c] + nadph[c] => aspsa[c] + nadp[c] + pi[c]
subsystem: Alanine and Aspartate Metabolism
- id: ASD
name: archaetidylserine decarboxylase
genes: Mbar_A0875
equation: dpgps[c] + h[c] => co2[c] + dpgpe[c]
subsystem: Lipid Cell Wall Metabolism
- id: ASNN
name: L asparaginase
genes: Mbar_A0003
equation: asn-L[c] + h2o[c] => asp-L[c] + nh4[c]
subsystem: Alanine and Aspartate Metabolism
- id: ASNS1
name: 'asparagine synthase glutamine hydrolysing '
genes: Mbar_A2257
equation: asp-L[c] + atp[c] + gln-L[c] + h2o[c] => amp[c] + asn-L[c] + glu-L[c]
+ h[c] + ppi[c]
subsystem: Alanine and Aspartate Metabolism
- id: ASNTRS2-1
name: Asparaginyl-tRNA synthetase 2 (correction pathway part 1)
genes: Mbar_A3173
equation: asp-L[c] + atp[c] + trnaasn[c] => amp[c] + ppi[c] + asntrna(asp)[c]
subsystem: Other
- id: ASNTRS2-2
name: Asparaginyl-tRNA synthetase 2 (correction pathway part 2)
genes: Mbar_A0882 and Mbar_A0883 and Mbar_A0884
equation: atp[c] + gln-L[c] + h2o[c] + asntrna(asp)[c] => adp[c] + glu-L[c] + h[c]
+ pi[c] + asntrna[c]
subsystem: Other
- id: ASP1DC
name: aspartate 1 decarboxylase
genes: Mbar_A2744
equation: asp-L[c] + h[c] => ala-B[c] + co2[c]
subsystem: Alanine and Aspartate Metabolism
- id: ASPCT
name: aspartate carbamoyltransferase
genes: ( Mbar_A1167 and Mbar_A1168 )
equation: asp-L[c] + cbp[c] => cbasp[c] + h[c] + pi[c]
subsystem: Alanine and Aspartate Metabolism
- id: ASPKi
name: aspartate kinase irreversible
genes: Mbar_A0861
equation: asp-L[c] + atp[c] => 4pasp[c] + adp[c]
subsystem: Alanine and Aspartate Metabolism
- id: ASPO2x
name: L-aspartate:NAD+ oxidoreductase
genes: Mbar_A1866
equation: asp-L[c] + nad[c] => h[c] + iasp[c] + nadh[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: ASPO2y
name: L-aspartate:NADP+ oxidoreductase (deaminating)
genes: Mbar_A1866
equation: asp-L[c] + nadp[c] => h[c] + iasp[c] + nadph[c]
subsystem: Other
- id: ASPTA
name: aspartate transaminase
genes: Mbar_A1546 or Mbar_A2080 or Mbar_A2083 or Mbar_A3113
equation: akg[c] + asp-L[c] <=> glu-L[c] + oaa[c]
subsystem: Alanine and Aspartate Metabolism
- id: ASPTRS
name: Aspartyl tRNA synthetase
genes: Mbar_A3173
equation: asp-L[c] + atp[c] + trnaasp[c] => amp[c] + asptrna[c] + ppi[c]
subsystem: Alanine and Aspartate Metabolism
- id: ATGH
name: archaetidylglycerol hydrogenase
genes: Mbar_A1602 or Mbar_A1603 or Mbar_A1604
equation: dggpg[c] + (8) h[c] + (8) nadph[c] => dpgpg[c] + (8) nadp[c]
subsystem: Lipid Cell Wall Metabolism
- id: ATIH
name: archaetidylinositol hydrogenase
genes: Mbar_A1602 or Mbar_A1603 or Mbar_A1604
equation: dggpi[c] + (8) h[c] + (8) nadph[c] => dpgpi[c] + (8) nadp[c]
subsystem: Lipid Cell Wall Metabolism
- id: ATPFORTRX
name: 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl
genes: Mbar_A0288 or Mbar_A1334
equation: aicar[c] + atp[c] + for[c] <=> adp[c] + fprica[c] + pi[c]
subsystem: Nucleotide Metabolism
- id: ATPHs
name: ATP amine hydrolysis (spontaneous)
equation: atp[c] + h2o[c] + h[c] => itp[c] + nh4[c]
subsystem: Nucleotide Metabolism
- id: ATPM
name: ATP maintenance requirement
equation: atp[c] + h2o[c] => adp[c] + h[c] + pi[c]
subsystem: Other
- id: ATPPRT
name: ATP phosphoribosyltransferase
genes: Mbar_A1312
equation: atp[c] + prpp[c] => ppi[c] + prbatp[c]
subsystem: Histidine Metabolism
- id: ATPS1
name: H exporting ATPase
genes: Mbar_A2777 or Mbar_A2778
equation: atp[c] + h2o[c] + h[c] => adp[c] + (2) h[e] + pi[c]
subsystem: Transport
- id: ATPS4r
name: 'ATP synthase four protons for one ATP '
genes: Mbar_A0384 and Mbar_A0385 and Mbar_A0389 and ( Mbar_A0391 or Mbar_A0379
) and Mbar_A0386 and ( Mbar_A0378 or Mbar_A0390 ) and Mbar_A0387 and Mbar_A0392
and Mbar_A0388
equation: adp[c] + (4) h[e] + pi[c] <=> atp[c] + h2o[c] + (3) h[c]
subsystem: Methanogenesis
- id: ATRZCH
name: atrazine chlorohydrolase
genes: Mbar_A3252
equation: atrz[c] + h2o[c] => cl[c] + h[c] + hatrz[c]
subsystem: Other
- id: ATSH
name: archaetidylserine hydrogenase
genes: Mbar_A1602 or Mbar_A1603 or Mbar_A1604
equation: dgggps[c] + (8) h[c] + (8) nadph[c] => dpgps[c] + (8) nadp[c]
subsystem: Lipid Cell Wall Metabolism
- id: BACCL
name: biotin acetyl CoA carboxylase ligase
genes: Mbar_A1588
equation: atp[c] + btn[c] + h[c] => btamp[c] + ppi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: BLAT
name: beta lysine acetyltransferase
genes: Mbar_A0671
equation: 36dahx[c] + accoa[c] => coa[c] + h[c] + nabl[c]
subsystem: Threonine and Lysine Metabolism
- id: BRFAPS
name: beta ribofuranosylaminobenzene 5 phosphate synthase
genes: Mbar_A0806 or Mbar_A1222
equation: 4abz[c] + h[c] + prpp[c] => Brfap[c] + co2[c] + ppi[c]
subsystem: Tetrahydramethanopterin Biosynthesis
- id: BSPRR
name: Biotin synthase protein regeneration reaction
equation: (2) fdox[c] + (2) fe2[c] + (2) h2s[c] + btnp[c] => (2) fdred[c] + (4)
h[c] + btnp-s2[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: BTNabc
name: biotin transport (ABC)
genes: Mbar_A0583 and ( Mbar_A0584 or Mbar_A0585 ) and Mbar_A0586
equation: atp[c] + btn[e] + h2o[c] => adp[c] + btn[c] + h[c] + pi[c]
subsystem: Transport
- id: BTNt2i
name: Biotin uptake
genes: Mbar_A0586
equation: btn[e] + h[e] => btn[c] + h[c]
subsystem: Transport
- id: BTS5
name: Biotin synthetase
equation: dtbt[c] + (2) fdox[c] + btnp-s2[c] => btn[c] + (2) fdred[c] + (2) fe2[c]
+ h2s[c] + btnp[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: BUP2
name: beta-ureidopropionase (D-3-amino-isobutanoate forming)
genes: Mbar_A2044
equation: 3uib[c] + h2o[c] + (2) h[c] => co2[c] + nh4[c] + 3aib-D[c]
subsystem: Other
- id: CA2abc
name: calcium transport via ABC system
genes: Mbar_A0500 or Mbar_A0406
equation: atp[c] + ca2[e] + h2o[c] => adp[c] + ca2[c] + h[c] + pi[c]
subsystem: Transport
- id: CAT
name: catalase
genes: Mbar_A0814
equation: (2) h2o2[c] => (2) h2o[c] + o2[c]
subsystem: Other
- id: CAt6
name: calcium sodium antiporter
genes: Mbar_A2093 or Mbar_A2253
equation: ca2[c] + na1[e] <=> ca2[e] + na1[c]
subsystem: Transport
- id: CBIAT
name: Cobinamide adenyltransferase
genes: Mbar_A1365
equation: atp[c] + cbi[c] + h[c] <=> adocbi[c] + pppi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CBIabc
name: Cobinamide transport via ABC system
genes: Mbar_A2260 and Mbar_A2261 and Mbar_A2262
equation: atp[c] + cbi[e] + h2o[c] => adp[c] + cbi[c] + h[c] + pi[c]
subsystem: Transport
- id: CBL1HBIabc
name: Cob 1 alamin HBI transport via ABC system
genes: Mbar_A2260 and Mbar_A2261 and Mbar_A2262
equation: atp[c] + cbl1hbi[e] + h2o[c] => adp[c] + cbl1hbi[c] + h[c] + pi[c]
subsystem: Transport
- id: CBL1abc
name: Cob 1 alamin transport via ABC system
genes: Mbar_A2260 and Mbar_A2261 and Mbar_A2262
equation: atp[c] + cbl1[e] + h2o[c] => adp[c] + cbl1[c] + h[c] + pi[c]
subsystem: Transport
- id: CBLAT2
name: cob I alamin HBI adenosyltransferase
genes: Mbar_A1365
equation: atp[c] + cbl1hbi[c] + h[c] => adocblhbi[c] + pppi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CBLD
name: cob I alamin degradation
equation: cbl1[c] + h2o[c] => cbi[c] + h[c] + unknown-cbl1deg[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CBPS
name: 'carbamoyl phosphate synthase glutamine hydrolysing '
genes: Mbar_A2374 and Mbar_A2375
equation: (2) atp[c] + gln-L[c] + h2o[c] + hco3[c] => (2) adp[c] + cbp[c] + glu-L[c]
+ (2) h[c] + pi[c]
subsystem: Glutamate metabolism
- id: CD2abc1
name: cadmium transport out via ABC system
genes: Mbar_A0343 or Mbar_A3337 or Mbar_A3446
equation: atp[c] + cd2[c] + h2o[c] => adp[c] + cd2[e] + h[c] + pi[c]
subsystem: Transport
- id: CD2abc2
name: cadmium transport in via ABC system
genes: Mbar_A0343 or Mbar_A3337 or Mbar_A3446
equation: atp[c] + cd2[e] + h2o[c] => adp[c] + cd2[c] + h[c] + pi[c]
subsystem: Transport
- id: CD2t4
name: Cadmium Hydrogen-Potassium antiporter
genes: Mbar_A3267
equation: cd2[c] + h[e] + k[e] <=> cd2[e] + h[c] + k[c]
subsystem: Transport
- id: CDGGGPP3
name: 'CDP alcohol phosphatidyltransferase glycerol 1 phosphate '
genes: Mbar_A1250
equation: cdgggp[c] + glyc1p[c] => cmp[c] + dggpgp[c] + h[c]
subsystem: Lipid Cell Wall Metabolism
- id: CDGGGPP4
name: 'CDP alcohol phosphatidyltransferase glycerol 1 phosphate hydroxy '
genes: Mbar_A1250
equation: 3hcdgggp[c] + glyc1p[c] => 3hdggpgp[c] + cmp[c] + h[c]
subsystem: Lipid Cell Wall Metabolism
- id: CDGGGS
name: CDP 2 3 di O geranylgeranyl sn glycerol synthase
genes: Mbar_A1936
equation: ctp[c] + dgggp[c] + h[c] => cdgggp[c] + ppi[c]
subsystem: Lipid Cell Wall Metabolism
- id: CDGGGS2
name: CDP 2 O 3 hydroxy geranyl 3 O geranyl sn glycerol synthase
genes: Mbar_A1936
equation: 3hdgggp[c] + ctp[c] + h[c] => 3hcdgggp[c] + ppi[c]
subsystem: Lipid Cell Wall Metabolism
- id: CDGGGSAT
name: CDP 2 3 di O geranylgeranyl sn glyceroserine O archaetidyltransferase
genes: Mbar_A0874
equation: cdgggp[c] + ser-L[c] => cmp[c] + dgggps[c] + h[c]
subsystem: Lipid Cell Wall Metabolism
- id: CDGGGSAT2
name: CDP 2 O 3 hydroxy geranyl 3 O geranyl sn glyceroserine O archaetidyltransferase
genes: Mbar_A0874
equation: 3hcdgggp[c] + ser-L[c] => 3hdgggps[c] + cmp[c] + h[c]
subsystem: Lipid Cell Wall Metabolism
- id: CDGGIPT
name: CDP digeranyl sn glycero myo inositol 3 phosphatidyltransferase
genes: Mbar_A1498
equation: cdgggp[c] + inost[c] => cmp[c] + dggpi[c] + h[c]
subsystem: Lipid Cell Wall Metabolism
- id: CDGGIPT2
name: 'CDP digeranyl sn glycero myo inositol 3 phosphatidyltransferase 3 hydroxy '
genes: Mbar_A1498
equation: 3hcdgggp[c] + inost[c] => 3hdggpi[c] + cmp[c] + h[c]
subsystem: Lipid Cell Wall Metabolism
- id: CEF430D1
name: Chloroethane F430 declorination 1
equation: f430[c] + fdred[c] + ceth[c] => cl[c] + fdox[c] + ethf430[c]
subsystem: Declorination
- id: CEF430D2
name: Chloroethane F430 declorination 2
equation: h[c] + ethf430[c] => f430_ox[c] + eth[c]
subsystem: Declorination
- id: CETHt
name: Chloroethane transport
equation: ceth[e] <=> ceth[c]
subsystem: Transport
- id: CF3Ha
name: 'coenzyme F390 hydrolase ATP '
equation: f390a[c] + h2o[c] => amp[c] + f420-2[c] + (2) h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CF3Hg
name: 'coenzyme F390 hydrolase GTP '
equation: f390g[c] + h2o[c] => f420-2[c] + gmp[c] + h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CF3Sa
name: 'coenzyme F390 synthetase ATP '
genes: Mbar_A0508
equation: atp[c] + f420-2[c] + h[c] => f390a[c] + ppi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CF3Sg
name: 'coenzyme F390 synthetase GTP '
genes: Mbar_A0508
equation: f420-2[c] + gtp[c] => f390g[c] + ppi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CH2ACH
name: cis homo 2aconitate hydrolase
genes: Mbar_A0714 or ( Mbar_A0244 and Mbar_A1961 )
equation: h2acon-C[c] + h2o[c] <=> tih2cit[c]
subsystem: Coenzyme B Biosynthesis
- id: CH3ACH
name: cis homo 3aconitate hydrolase
genes: Mbar_A0714 or ( Mbar_A0244 and Mbar_A1961 )
equation: h2o[c] + h3acon-C[c] <=> tih3cit[c]
subsystem: Coenzyme B Biosynthesis
- id: CH4St
name: Methanethiol Transport
equation: ch4s[e] <=> ch4s[c]
subsystem: Transport
- id: CH4t
name: Methane Transport
equation: ch4[e] <=> ch4[c]
subsystem: Transport
- id: CHACH
name: cis homoaconitate hydrolase
genes: Mbar_A0714 or ( Mbar_A0244 and Mbar_A1961 )
equation: h2o[c] + hacon-C[c] <=> ihcit-T[c]
subsystem: Coenzyme B Biosynthesis
- id: CHORM
name: chorismate mutase
genes: Mbar_A3126
equation: chor[c] => pphn[c]
subsystem: Amino Acid Metabolism
- id: CHORS
name: chorismate synthase
genes: Mbar_A1438
equation: 3psme[c] => chor[c] + pi[c]
subsystem: Tyrosine Tryptophan and Phenylalanine Metabolism
- id: CHRPL
name: Chorismate pyruvate lyase
genes: Mbar_A3626 and Mbar_A3627
equation: chor[c] => pyr[c] + 4hbz[c]
subsystem: Tyrosine Tryptophan and Phenylalanine Metabolism
- id: CM5HBCMT
name: 'Co-methyl-Co-5-hydroxybenzimidazolylcob(I)amide: coenzyme M methyltransferase'
genes: ( Mbar_A1054 or Mbar_A3639 ) or ( Mbar_A0841 or Mbar_A1688 ) or ( Mbar_A1258
or Mbar_A0410 or Mbar_A1713 or Mbar_A2073 ) or Mbar_A3585
equation: com[c] + m5hbc[c] => h[c] + mcom[c] + 5hbc_red[c]
subsystem: Methanogenesis
- id: CMLDC
name: 4 carboxymuconolactone decarboxylase
genes: Mbar_A0700 or Mbar_A1720 or Mbar_A3671
equation: 2c25dho[c] + h[c] => 5odhf2a[c] + co2[c]
subsystem: Other
- id: CO2t
name: CO2 transporter via diffusion
equation: co2[e] <=> co2[c]
subsystem: Transport
- id: COBALTt5
name: 'cobalt transport inout via permease no H '
genes: Mbar_A2983 or Mbar_A2809 or Mbar_A2810
equation: cobalt2[c] <=> cobalt2[e]
subsystem: Transport
- id: COBS
name: coenzyme b synthatse
genes: Mbar_A0806
equation: 7mht[c] + atp[c] => adp[c] + cob[c] + h[c]
subsystem: Coenzyme B Biosynthesis
- id: COCHL
name: cobaltochelatase
genes: Mbar_A0797 or Mbar_A1771 or Mbar_A1795 or Mbar_A2144 or Mbar_A3731
equation: atp[c] + cobalt2[c] + h2o[c] + hgbam[c] => adp[c] + co2dam[c] + (4) h[c]
+ pi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CODH2
name: carbon monoxide dehydrogenase acetyl CoA synthase 2
genes: ( Mbar_A0204 or Mbar_A0434 ) and ( Mbar_A0203 or Mbar_A0433 ) and ( Mbar_A0202
or Mbar_A0432 ) and ( Mbar_A0200 or Mbar_A0430 ) and ( Mbar_A0199 or Mbar_A0429
) and ( Mbar_A3525 or Mbar_A3717 ) and Mbar_A3526
equation: co[c] + (2) fdox[c] + h2o[c] => co2[c] + (2) fdred[c] + (2) h[c]
subsystem: Methanogenesis
- id: CODHr
name: carbon monoxide dehydrogenase acetyl CoA synthase
genes: ( Mbar_A0204 or Mbar_A0434 ) and ( Mbar_A0203 or Mbar_A0433 ) and ( Mbar_A0202
or Mbar_A0432 ) and ( Mbar_A0200 or Mbar_A0430 ) and ( Mbar_A0199 or Mbar_A0429
) and ( Mbar_A3525 or Mbar_A3717 ) and Mbar_A3526
equation: accoa[c] + (2) fdox[c] + h2o[c] + h4spt[c] <=> co2[c] + coa[c] + (2)
fdred[c] + (2) h[c] + mh4spt[c]
subsystem: Methanogenesis
- id: COMS
name: coenzyme M synthase
equation: h2o[c] + sec[c] => com[c] + nh4[c] + pyr[c]
subsystem: Coenzyme M Biosynthesis
- id: COt
name: CO transporter via diffusion
equation: co[c] <=> co[e]
subsystem: Transport
- id: CPC2MT
name: precorrin 2 C20 methyltransferase
genes: Mbar_A0626
equation: amet[c] + copre2[c] => ahcys[c] + copre3[c] + h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CPC3MT
name: precorrin 3B C17 methyltransferase
genes: Mbar_A0629
equation: amet[c] + copre3[c] => ahcys[c] + copre4[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CPC4MT
name: precorrin 4 C11 methyltransferase
genes: Mbar_A0627
equation: amet[c] + copre4[c] => ahcys[c] + copre5[c] + h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CPC5MT
name: precorrin 5 C1 methyltransferase
genes: Mbar_A1493
equation: amet[c] + copre5[c] + h2o[c] => acald[c] + ahcys[c] + copre6[c] + (2)
h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CPC6MT
name: 'precorrin 6Y C5 15 methyltransferase decarboxylating '
genes: Mbar_A0625 or Mbar_A1492
equation: (2) amet[c] + codhpre6[c] => (2) ahcys[c] + co2[c] + copre8[c] + (2)
h[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CPC6R
name: precorrin 6A reductase
equation: copre6[c] + (2) h[c] + nadph[c] => codhpre6[c] + nadp[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CPC8MM
name: precorrin 8X methylmutase
genes: Mbar_A0630
equation: copre8[c] + h[c] <=> cobya[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CS
name: citrate synthase
genes: Mbar_A0715
equation: accoa[c] + h2o[c] + oaa[c] => cit[c] + coa[c] + h[c]
subsystem: Citric Acid Cycle
- id: CSND
name: Cytosine deaminase
genes: Mbar_A3003
equation: csn[c] + h2o[c] + h[c] => nh4[c] + ura[c]
subsystem: Nucleotide Metabolism
- id: CTPRIBFLVTX
name: CTP:riboflavin 5'-phosphotransferase
genes: Mbar_A1523
equation: ctp[c] + ribflv[c] <=> cdp[c] + fmn[c] + h[c]
subsystem: Central Metabolism
- id: CTPS1
name: 'CTP synthase NH3 '
genes: Mbar_A3518
equation: atp[c] + nh4[c] + utp[c] <=> adp[c] + ctp[c] + (2) h[c] + pi[c]
subsystem: Nucleotide Metabolism
- id: CTPS2
name: 'CTP synthase glutamine '
genes: Mbar_A3518
equation: atp[c] + gln-L[c] + h2o[c] + utp[c] => adp[c] + ctp[c] + glu-L[c] + (2)
h[c] + pi[c]
subsystem: Nucleotide Metabolism
- id: CYRDAAT
name: cob I yrinic acid a c diamide adenosyltransferase
genes: Mbar_A1365
equation: atp[c] + co1dam[c] + h[c] => adcobdam[c] + pppi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CYRDAR
name: cob II yrinic acid a c diamide reductase
equation: (2) co2dam[c] + nadh[c] => (2) co1dam[c] + h[c] + nad[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CYRDAS
name: 'Cob II yrinate a c diamide synthase glutamine hydrolysing '
genes: Mbar_A0348 or Mbar_A1187 or Mbar_A2158
equation: (2) atp[c] + cobya[c] + (2) gln-L[c] + h2o[c] => (2) adp[c] + co2dam[c]
+ (2) glu-L[c] + h[c] + ppi[c]
subsystem: Vitamins Cofactor Biosynthesis
- id: CYSDS
name: Cysteine Desulfhydrase
genes: Mbar_A3023
equation: cys-L[c] + h2o[c] => h2s[c] + nh4[c] + pyr[c]
subsystem: Cysteine Metabolism
- id: CYSSr
name: 'cysteine synthase reversible '
genes: Mbar_A2422
equation: acser[c] + h2s[c] <=> ac[c] + cys-L[c] + h[c]
subsystem: Cysteine Metabolism
- id: CYSTRS
name: Cysteinyl tRNA synthetase
genes: Mbar_A1653
equation: atp[c] + cys-L[c] + trnacys[c] => amp[c] + cystrna[c] + ppi[c]
subsystem: Cysteine Metabolism
- id: CYSt2r
name: L cysteine reversible transport via proton symport
equation: cys-L[e] + h[e] <=> cys-L[c] + h[c]
subsystem: Transport
- id: CYTDK1
name: cytidine kinase (ATP)
genes: Mbar_A2903
equation: atp[c] + cytd[c] => adp[c] + cmp[c] + h[c]
subsystem: Nucleotide Metabolism
- id: CYTK1
name: 'cytidylate kinase CMP '
genes: Mbar_A0083
equation: atp[c] + cmp[c] <=> adp[c] + cdp[c]
subsystem: Nucleotide Metabolism
- id: CYTK2
name: 'cytidylate kinase dCMP '