Queries

List of available tdb queries:

• allele_cnts : Allele counts and frequency
• allele_cnts_bylen : Allele counts and frequency by allele length
• allele_seqs : Allele sequence, length, and difference from reference
• monref : Monozygotic reference sites per-sample and overall
• gtmerge : Collect per-locus genotypes
• metadata : Get table properties e.g. row counts and memory/disk sizes (mb)
• methyl : Allele length, methylation, and CpG stats (PMID:3656447)
• comp_poly_score : Calculate loci's sequence composition as mean jaccard index
• len_poly_score : Number of distinct alleles by length per 100 samples for each locus