Pin setuptools=69 (#39)

.github/environments/fluviewer-kkuchinski.yaml

@@ -0,0 +1,21 @@
+name: fluviewer-kkuchinski
+channels:
+  - bioconda
+  - conda-forge
+  - defaults
+dependencies:
+  - bbmap=39.01
+  - bcftools=1.17
+  - blast=2.14.1
+  - bwa=0.7.17
+  - samtools=1.17
+  - spades=3.15.3
+  - clustalw=2.1
+  - freebayes=1.3.6
+  - python=3
+  - setuptools=69
+  - pip
+  - pandas=2.0.3
+  - seaborn=0.12.2
+  - pip:
+    - FluViewer==0.1.11

.github/scripts/install_fluviewer_kkuchinski.sh

@@ -4,10 +4,4 @@ source ${HOME}/.bashrc
 
 eval "$(conda shell.bash hook)"
 
-fluviewer_version="0.1.11"
-
-conda env create -f environment.yaml -n fluviewer-kkuchinski
-
-conda activate fluviewer-kkuchinski
-
-pip install fluviewer==${fluviewer_version}
+conda env create -f .github/environments/fluviewer-kkuchinski.yaml

environment.yaml

@@ -13,6 +13,7 @@ dependencies:
   - clustalw=2.1
   - freebayes=1.3.6
   - python=3
+  - setuptools=69
   - pip
   - pandas=2.0.3
   - seaborn=0.12.2