merge main

Dockerfile

@@ -1,6 +1,6 @@
 FROM node:16-slim
 
-ARG AUSPICE_VERSION="v2.56.1"
+ARG AUSPICE_VERSION="v2.59.1"
 
 RUN apt-get update && apt-get install -y --no-install-recommends \
     ca-certificates \
@@ -11,7 +11,8 @@ COPY scripts /scripts
 WORKDIR /nextstrain/auspice
 
 RUN /scripts/download-repo https://github.com/BCCDC-PHL/auspice ${AUSPICE_VERSION} . \
-    && npm install --omit dev . && npm link
+    && npm install --omit dev . \
+    && npm link
 
 ENV HOST=0.0.0.0
 

README.md

@@ -38,3 +38,21 @@ docker run -d\
 ```
 
 The application should be available on [http://localhost:4000](http://localhost:4000).
+
+## Pulling the Container from GitHub Container Registry
+
+Pulling the container from the [GitHub Container Registry](https://github.com/features/packages) (aka "GitHub Packages") requires a GitHub account and a
+[personal access token](https://docs.github.com/en/authentication/keeping-your-account-and-data-secure/managing-your-personal-access-tokens).
+
+First store the personal access token to an environment variable `CR_PAT`, then login to the container registry as follows:
+
+```
+export CR_PAT="ghp_a68fgN8..."
+echo $CR_PAT | docker login ghcr.io -u <GITHUB_USERNAME> --password-stdin
+```
+
+The container can then be pulled as follows:
+
+```
+docker pull ghcr.io/bccdc-phl/auspice:release
+```