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Use omopDataset variable throughout servey SQL #1081

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Nov 27, 2024
Merged

Use omopDataset variable throughout servey SQL #1081

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32 changes: 16 additions & 16 deletions underlay/src/main/resources/config/datamapping/aouRT/entity/surveyOccurrence/all.sql
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Original file line number Diff line number Diff line change
Expand Up @@ -110,8 +110,8 @@ SELECT distinct
ac.name AS answer_concept_name,
sv.survey_concept_id as survey_version_concept_id,
svc.concept_name as survey_version_name
FROM `all-of-us-ehr-dev.SR2023Q3R2.observation` AS o
JOIN `all-of-us-ehr-dev.SR2023Q3R2.prep_survey` AS ps
FROM `${omopDataset}.observation` AS o
JOIN `${omopDataset}.prep_survey` AS ps
ON ps.concept_id = o.observation_source_concept_id
AND (
(CAST(ps.value AS INT64) = o.value_source_concept_id)
Expand All @@ -120,21 +120,21 @@ FROM `all-of-us-ehr-dev.SR2023Q3R2.observation` AS o
)
AND ps.subtype = 'ANSWER'
AND survey IN ('February2021COVID19Part', 'July2020Covid19Particip', 'May2020Covid19Participa')
JOIN `all-of-us-ehr-dev.SR2023Q3R2.prep_survey` AS ps_survey
JOIN `${omopDataset}.prep_survey` AS ps_survey
ON ps_survey.survey = ps.survey
AND ps_survey.subtype = 'SURVEY'
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.concept` AS sc
LEFT JOIN `${omopDataset}.concept` AS sc
ON sc.concept_id = ps_survey.concept_id
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.prep_survey` AS qc
LEFT JOIN `${omopDataset}.prep_survey` AS qc
ON qc.concept_id = o.observation_source_concept_id
AND qc.subtype = 'QUESTION'
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.prep_survey` AS ac
LEFT JOIN `${omopDataset}.prep_survey` AS ac
ON ac.concept_id = o.observation_source_concept_id
AND CAST(ac.value AS INT64) = o.value_source_concept_id
AND ac.subtype = 'ANSWER'
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.survey_conduct` AS sv
LEFT JOIN `${omopDataset}.survey_conduct` AS sv
ON sv.survey_conduct_id = o.questionnaire_response_id
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.concept` AS svc
LEFT JOIN `${omopDataset}.concept` AS svc
ON svc.concept_id = sv.survey_concept_id
WHERE sv.survey_concept_id IN (
2100000002, 2100000003, 2100000004, 2100000005, 2100000006, 2100000007
Expand All @@ -156,8 +156,8 @@ SELECT distinct
ac.name AS answer_concept_name,
sv.survey_concept_id as survey_version_concept_id,
svc.concept_name as survey_version_name
FROM `all-of-us-ehr-dev.SR2023Q3R2.observation` AS o
JOIN `all-of-us-ehr-dev.SR2023Q3R2.prep_survey` AS ps
FROM `${omopDataset}.observation` AS o
JOIN `${omopDataset}.prep_survey` AS ps
ON ps.concept_id = o.observation_source_concept_id
AND (
(CAST(ps.value AS INT64) = o.value_source_concept_id)
Expand All @@ -166,21 +166,21 @@ FROM `all-of-us-ehr-dev.SR2023Q3R2.observation` AS o
)
AND ps.subtype = 'ANSWER'
AND survey IN ('NewYearMinuteSurveyOnCO')
JOIN `all-of-us-ehr-dev.SR2023Q3R2.prep_survey` AS ps_survey
JOIN `${omopDataset}.prep_survey` AS ps_survey
ON ps_survey.survey = ps.survey
AND ps_survey.subtype = 'SURVEY'
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.concept` AS sc
LEFT JOIN `${omopDataset}.concept` AS sc
ON sc.concept_id = ps_survey.concept_id
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.prep_survey` AS qc
LEFT JOIN `${omopDataset}.prep_survey` AS qc
ON qc.concept_id = o.observation_source_concept_id
AND qc.subtype = 'QUESTION'
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.prep_survey` AS ac
LEFT JOIN `${omopDataset}.prep_survey` AS ac
ON ac.concept_id = o.observation_source_concept_id
AND CAST(ac.value AS INT64) = o.value_source_concept_id
AND ac.subtype = 'ANSWER'
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.survey_conduct` AS sv
LEFT JOIN `${omopDataset}.survey_conduct` AS sv
ON sv.survey_conduct_id = o.questionnaire_response_id
LEFT JOIN `all-of-us-ehr-dev.SR2023Q3R2.concept` AS svc
LEFT JOIN `${omopDataset}.concept` AS svc
ON svc.concept_id = sv.survey_concept_id
WHERE sv.survey_concept_id IN (
905047, 905055, 765936, 1741006
Expand Down