Update single-user-sobigdata with conda-lock #236
Workflow file for this run
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--- | |
name: Build and push d4science containers | |
on: | |
push: | |
# only pushes on master so we don't push intermediate results to dockerhub | |
branches: | |
- master | |
pull_request: | |
jobs: | |
detect-changes: | |
uses: ./.github/workflows/build-list.yml | |
with: | |
base: d4science-base/Dockerfile | |
images: | | |
"single-user-d4science/Dockerfile" | |
"single-user-sobigdata/Dockerfile" | |
"single-user-3d-d4science/Dockerfile" | |
"single-user-r-d4science/Dockerfile" | |
"single-user-scientometrics-d4science/Dockerfile" | |
"single-user-sobigdata-lipari23/Dockerfile" | |
"single-user-sobigdata-aaai24/Dockerfile" | |
user-images: | |
name: Build and push images | |
if: fromJson(needs.detect-changes.outputs.matrix).image | |
needs: [detect-changes] | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: ${{ fromJson(needs.detect-changes.outputs.matrix) }} | |
steps: | |
- name: try to make free space | |
run: | | |
sudo rm -rf /usr/share/dotnet | |
sudo rm -rf /usr/local/lib/android | |
sudo rm -rf /opt/ghc | |
- name: Checkout | |
uses: actions/checkout@v4 | |
- name: Docker meta | |
id: docker_meta | |
uses: docker/metadata-action@v5 | |
with: | |
images: eginotebooks/${{ matrix.image }} | |
tags: | | |
type=sha | |
- name: Set up QEMU | |
uses: docker/setup-qemu-action@v3 | |
- name: Login to DockerHub | |
uses: docker/login-action@v3 | |
with: | |
username: ${{ secrets.DOCKERHUB_USERNAME }} | |
password: ${{ secrets.DOCKERHUB_TOKEN }} | |
if: github.event_name != 'pull_request' | |
# Unfortunately I haven't been able to load an prebuilt image here | |
# so not using the build-push-action from docker | |
# it's missing the labels and assumes tags is just one | |
- name: Build full image | |
run: | | |
docker build \ | |
--tag ${{ steps.docker_meta.outputs.tags }} \ | |
--tag eginotebooks/${{ matrix.image }}:latest \ | |
${{ matrix.image }} | |
- name: Push full image | |
run: | | |
docker push ${{ steps.docker_meta.outputs.tags }} | |
docker push eginotebooks/${{ matrix.image }}:latest | |
if: ${{ github.event_name != 'pull_request' }} | |
- uses: addnab/docker-run-action@v3 | |
with: | |
image: ${{ steps.docker_meta.outputs.tags }} | |
options: -v ${{ github.workspace }}/${{ matrix.image }}:/image-data | |
run: | | |
for f in /image-data/tests/*.ipynb; do | |
if [ -e "$f" ]; then | |
jupyter nbconvert --ExecutePreprocessor.timeout=600 --to rst \ | |
--execute --stdout $f || exit 1 | |
else | |
true | |
fi | |
done |