Update pages (#10)

* Increase font size in code blocks

See academicpages#59

* Adds missing semi-colon

* fix font awesome code icon in syntax box

* Fix encoding issue with bib files

* add goodreads to site

* change orcid color

* add medium icon

* add medium profile

* Resolve Google Scholar link not displayed

There was as slight typo in the logic due to which the google scholar link for the respective author's profile set in Config was not being displayed.

* Adding pronouns field to author profile

* Add Google Analytics 4 Support

* fix: Remove deprecated JavaScript to avoid load error from 404 page

* Update files to be ignored

* + webrick to gem file

* academicpages#1902 RM excerpt in pages

* Start updating the README

* academicpages#456 Use real Google Scholar link as an example

* Update issue templates

* RM minimal mistakes changelog

* academicpages#1906

* Edit readme

* + Syntax highlighting example

* Update README.md

* Update README

* Correct syntax

* Streamline config organization for new users

* Add Mastodon to social media

* Closes academicpages#696 with new Kaggle link

* Adjustments to Kaggle link

* Closes academicpages#271 with addition of arXiv

* academicpages#244, academicpages#1600, academicpages#1917 update font awesome to v6, add icons

* Closes academicpages#1911 with update to Academicons

* Closes academicpages#1671 with a new favicon

* academicpages#462 update inline documentation

* academicpages#1041 allow links to wrap

* Closes academicpages#1773 with update to HTML

* Closes academicpages#45 with an update to the CV generator

* academicpages#33, academicpages#1919 Possible missing template fix, bump MathJax to 3.0

* academicpages#1153 add Zhihu

* Closes academicpages#1905 with updates to documentation

* Closes academicpages#693 with updates to documentation and location of citation

* Closes academicpages#820 with updated style

* added missing spanish translations and updated some of the previous ones on ui-text-yml

* Replace `polyfill.io`

* Closes academicpages#1972, update Markdown documentation

* Closes academicpages#1936 with setting to hide RSS feed

* academicpages#1935 clean-up the footer follow a bit

* RM old development override

* Make it clearer where the footnotes are

* academicpages#1975 ignore files created by npm

* Closes academicpages#339 with a fixed masthead

* academicpages#1975 version updates, manage jQuery from npm

* Closes academicpages#1970 with responsive element

* Fix typo

* Closes academicpages#1999

* scroll in sidebar

* scroll in sidebar

* Add scroll to sidebar and adjust media query for screen adaptability

* Closes academicpages#2029 with update to sidebar

* Closes academicpages#1917 with with icon, FA bump to 6.5.2

* academicpages#2061 Update README with note on dependencies

* Closes academicpages#2055 with adjustment to masthead-height

* Adjust variable name to prevent confusion

* Update casing of template name

* Fix typo in build-essential package name.

The package which is required for this installation is named `build-essential`, not `build-essentials`.

* Fix academicpages#1920 by allowing text to wrap

* Add support to semantic scholar in author profile

* Support for displaying slides on publication pages

* Addressed PR academicpages#2126 review comments

* Fix typo, modifications to style

* Update _config.yml

Make claimed default and actual default consistent

* Add Chinese (both simplified and traditional) to ui-text.yml

Simplified Chinese:
  zh
  zh-CN

Traditional Chinese:
  zh-HK
  zh-TW

* Adds commands for MacOS

* Update README.md

* academicpages#2316 update padding

* academicpages#2318 updating documentation a bit

* Alphabetize the excludes

* Closes academicpages#48 with a more general and customizable approach

* fix: lastfm url

* Update README.md

* Fixing YouTube URL generation in author-profile.html

YouTube does not use /user/username at the moment. If a person has a YouTube handle, the URL is:
www.youtube.com/@HANDLE

The fix is very minimal but I needed it for my website so I've also added it here.

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* academicpages#1975 cleaning up the gem files a bit

* academicpages#1975 update fitvids to NPM

* academicpages#1975 update magnific-popup to NPM

* academicpages#1975 update smooth scroll to NPM

* Closes academicpages#1975 RM stickyfill in favor of native browser support

* Closes academicpages#2287, academicpages#534 with updates to documentation, better emoji generation

* Add a dockerfile

* Update README.md

* bug: comments appear at bottom of page

* Closes academicpages#146 with information the details HTML tag

* Minor formatting

* Closes academicpages#828 with update to put the pages last update in the footer.

* academicpages#828 different format string

* academicpages#828 adjustments to account for GitHub Pages limitations

* Fix toc crop (academicpages#221)

Fix by @qhuang-math. I have also removed underlining of toc links, which was being overridden by post body css.

* Reduce excessive footer padding

* Fix misalignment of navigation bar with post body

There was a regression in the template updates where the navigation bar no longer aligns with the post left margin at normal viewport.

* Add notebook to fetch publication information from orcid

* Update author-profile.html

improve alignment of "employer" sidebar

* Closes academicpages#2469 with update to only use username

* academicpages#1093 MV notebook to generator directory

* Update Dockerfile

* Update archive-single.html

In the "archive-single" include, the "Download" word is repeated twice in the case when only a slidesURL is given. 
An extra paragraph ending is also mistakenly present.

* Add `scopus` in academic websites

* Adjustments to the about

* Close academicpages#2493 Update for Bing crawler

* Update README with example

* Additional pointers for help

* academicpages#2591 clarify URL in config

* Fix typo in Zhihu URL protocol in

* fix: typo

* Update Gemfile

add   gem 'jekyll-redirect-from'

* Update _config.yml

added   - jekyll-redirect-from to plugins and whitelist

* improved link color contrast

changed the links' blue color to a darker shade to meet color contrast (web accessibility) standards

* improved link color contrast (updated color)

updated the link text color from #236070 to #2F7F93 for improved readability and contrast as recommended by the developers

* Add backup of Gemfile and remove two more templates

---------

Co-authored-by: Steve <[email protected]>
Co-authored-by: Rob Williams <[email protected]>
Co-authored-by: sigma67 <[email protected]>
Co-authored-by: naveenarun <[email protected]>
Co-authored-by: Mohit_Gupta <[email protected]>
Co-authored-by: Bhavish Pahwa <[email protected]>
Co-authored-by: amyzlc <[email protected]>
Co-authored-by: Sonny Arora <[email protected]>
Co-authored-by: Bhav Beri <[email protected]>
Co-authored-by: rjzupkoii <[email protected]>
Co-authored-by: johnhandleyd <[email protected]>
Co-authored-by: SukkaW <[email protected]>
Co-authored-by: Maximiliano <[email protected]>
Co-authored-by: Dan Grahn <[email protected]>
Co-authored-by: Dan Grahn <[email protected]>
Co-authored-by: thiagorr162 <[email protected]>
Co-authored-by: Saravanan D. <[email protected]>
Co-authored-by: Manuel Haussmann <[email protected]>
Co-authored-by: Yuhang YAN (Henry) <[email protected]>
Co-authored-by: Zarela <[email protected]>
Co-authored-by: Yanchen Huang <[email protected]>
Co-authored-by: edbrito-swdev <[email protected]>
Co-authored-by: Alberto Barradas <[email protected]>
Co-authored-by: Samir Rashid <[email protected]>
Co-authored-by: Carlos Martinez <[email protected]>
Co-authored-by: Xiaofei (Carl) Zang <[email protected]>
Co-authored-by: Zoe <[email protected]>
Co-authored-by: OPasche <[email protected]>
Co-authored-by: Domenico Tortorella <[email protected]>
Co-authored-by: TankTechnology <[email protected]>
Co-authored-by: Gabriel Natenshon <[email protected]>
Co-authored-by: tomrannosaurus <[email protected]>
Co-authored-by: Paul Chiou <[email protected]>

.github/ISSUE_TEMPLATE/bug_report.md

@@ -0,0 +1,38 @@
+---
+name: Bug report
+about: Create a report to help us improve
+title: ''
+labels: ''
+assignees: ''
+
+---
+
+**Describe the bug**
+A clear and concise description of what the bug is.
+
+**To Reproduce**
+Steps to reproduce the behavior:
+1. Go to '...'
+2. Click on '....'
+3. Scroll down to '....'
+4. See error
+
+**Expected behavior**
+A clear and concise description of what you expected to happen.
+
+**Screenshots**
+If applicable, add screenshots to help explain your problem.
+
+**Desktop (please complete the following information):**
+ - OS: [e.g. iOS]
+ - Browser [e.g. chrome, safari]
+ - Version [e.g. 22]
+
+**Smartphone (please complete the following information):**
+ - Device: [e.g. iPhone6]
+ - OS: [e.g. iOS8.1]
+ - Browser [e.g. stock browser, safari]
+ - Version [e.g. 22]
+
+**Additional context**
+Add any other context about the problem here.

.github/ISSUE_TEMPLATE/feature_request.md

@@ -0,0 +1,20 @@
+---
+name: Feature request
+about: Suggest an idea for this project
+title: ''
+labels: ''
+assignees: ''
+
+---
+
+**Is your feature request related to a problem? Please describe.**
+A clear and concise description of what the problem is. Ex. I'm always frustrated when [...]
+
+**Describe the solution you'd like**
+A clear and concise description of what you want to happen.
+
+**Describe alternatives you've considered**
+A clear and concise description of any alternative solutions or features you've considered.
+
+**Additional context**
+Add any other context or screenshots about the feature request here.

.gitignore

@@ -0,0 +1,13 @@
+# Ignore the contents of the _site directory and other cache directories
+_site/
+.sass-cache/
+
+# Ignore the directory for local files during development
+local/
+
+# Ignore the Gemfile that is generated
+Gemfile.lock
+
+# Ingore files created by npm
+node_modules
+package-lock.json

Dockerfile

@@ -0,0 +1,24 @@
+# Base image: Ruby with necessary dependencies for Jekyll
+FROM ruby:3.2
+
+# Install dependencies
+RUN apt-get update && apt-get install -y \
+    build-essential \
+    nodejs \
+    && rm -rf /var/lib/apt/lists/*
+
+# Set the working directory inside the container
+WORKDIR /usr/src/app
+
+# Copy Gemfile into the container (necessary for `bundle install`)
+COPY Gemfile ./
+
+# Install bundler and dependencies
+RUN gem install bundler:2.3.26 && bundle install
+
+# Expose port 4000 for Jekyll server
+EXPOSE 4000
+
+# Command to serve the Jekyll site
+CMD ["bundle", "exec", "jekyll", "serve", "--host", "0.0.0.0", "--watch"]
+

Gemfile

@@ -1,29 +1,12 @@
-source "https://rubygems.org"
+source 'https://rubygems.org'
 
-# Hello! This is where you manage which Jekyll version is used to run.
-# When you want to use a different version, change it below, save the
-# file and run `bundle install`. Run Jekyll with `bundle exec`, like so:
-#
-#     bundle exec jekyll serve
-#
-# This will help ensure the proper Jekyll version is running.
-# Happy Jekylling!
-
-gem 'tzinfo-data'
-
-gem "github-pages", group: :jekyll_plugins
-
-# If you want to use Jekyll native, uncomment the line below.
-# To upgrade, run `bundle update`.
-
-# gem "jekyll"
-
-gem "wdm", "~> 0.1.0" if Gem.win_platform?
-
-# If you have any plugins, put them here!
 group :jekyll_plugins do
-  # gem "jekyll-archives"
-  gem "jekyll-feed"
+  gem 'jekyll'
+  gem 'jekyll-feed'
   gem 'jekyll-sitemap'
-  gem 'hawkins'
+  gem 'jekyll-redirect-from'
+  gem 'jemoji'
+  gem 'webrick', '~> 1.8'
 end
+
+gem 'github-pages'

Gemfile.backup

@@ -0,0 +1,31 @@
+source "https://rubygems.org"
+
+# Hello! This is where you manage which Jekyll version is used to run.
+# When you want to use a different version, change it below, save the
+# file and run `bundle install`. Run Jekyll with `bundle exec`, like so:
+#
+#     bundle exec jekyll serve
+#
+# This will help ensure the proper Jekyll version is running.
+# Happy Jekylling!
+
+gem "github-pages", group: :jekyll_plugins
+
+# If you want to use Jekyll native, uncomment the line below.
+# To upgrade, run `bundle update`.
+
+# gem "jekyll"
+
+gem "wdm", "~> 0.1.0" if Gem.win_platform?
+
+# If you have any plugins, put them here!
+group :jekyll_plugins do
+  gem 'jekyll'
+  gem 'jekyll-feed'
+  gem 'jekyll-sitemap'
+  gem 'jekyll-redirect-from'
+  gem 'jemoji'
+  gem 'webrick', '~> 1.8'
+end
+
+gem 'github-pages'