added related link

NA-MIC · Jan 14, 2025 · 00ccdae · 00ccdae
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Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/...ctureWsidicomizerAsAToolForConversionIntoDicomWholeSlideImagingFormat/README.md b/...ctureWsidicomizerAsAToolForConversionIntoDicomWholeSlideImagingFormat/README.md
@@ -97,6 +97,7 @@ Other related materials:
 * IDC Portal: [https://portal.imaging.datacommons.cancer.gov/](https://portal.imaging.datacommons.cancer.gov/)
 * [conversion_mirax_dicom](https://github.com/ImagingDataCommons/conversion_mirax_dicom/blob/main/add_metadata.py) (currently, private repo)
 * Related earlier project from PW40: [https://projectweek.na-mic.org/PW40_2024_GranCanaria/Projects/WsiDicomImprovementFromViewerToAnalysis/](https://projectweek.na-mic.org/PW40_2024_GranCanaria/Projects/WsiDicomImprovementFromViewerToAnalysis/)
+* Code from Fabian Hörst experiments: [https://github.com/TIO-IKIM/PathoPatcher/blob/main/pathopatch/patch_extraction/patch_extraction.py](https://github.com/TIO-IKIM/PathoPatcher/blob/main/pathopatch/patch_extraction/patch_extraction.py)
 * Test samples used by wsidicomizer: [https://github.com/imi-bigpicture/wsidicomizer/blob/main/tests/download_test_images.py#L23-L60](https://github.com/imi-bigpicture/wsidicomizer/blob/main/tests/download_test_images.py#L23-L60)
 * [Google WSI transformation pipeline](https://github.com/GoogleCloudPlatform/medical-imaging/blob/main/pathology/transformation_pipeline/docs/digital_pathology_transformation_pipeline_to_dicom_spec.md)