Add -DPORTABLE_KINDS option to autotools and cmake build system #864

Job	Run time
build (-DOPENMP=on, -DCMAKE_BUILD_TYPE=Release)	11m 28s
build (-DOPENMP=on, -DCMAKE_BUILD_TYPE=Debug)	3m 28s
build (-DOPENMP=on, -DUSE_DEPRECATED_IO=on, -DCMAKE_BUILD_TYPE=Release)	12m 46s
build (-DOPENMP=on, -DUSE_DEPRECATED_IO=on, -DCMAKE_BUILD_TYPE=Debug)	3m 50s
build (-DOPENMP=on, -DWITH_YAML=on, -DCMAKE_BUILD_TYPE=Release)	12m 11s
build (-DOPENMP=on, -DWITH_YAML=on, -DCMAKE_BUILD_TYPE=Debug)	3m 41s
build (-DOPENMP=on, -DWITH_YAML=on, -DUSE_DEPRECATED_IO=on, -DCMAKE_BUILD_TYPE=Release)	12m 44s
build (-DOPENMP=on, -DWITH_YAML=on, -DUSE_DEPRECATED_IO=on, -DCMAKE_BUILD_TYPE=Debug)	4m 0s
build (-DOPENMP=off, -DCMAKE_BUILD_TYPE=Release)	11m 43s
build (-DOPENMP=off, -DCMAKE_BUILD_TYPE=Debug)	3m 25s
build (-DOPENMP=off, -DUSE_DEPRECATED_IO=on, -DCMAKE_BUILD_TYPE=Release)	12m 1s
build (-DOPENMP=off, -DUSE_DEPRECATED_IO=on, -DCMAKE_BUILD_TYPE=Debug)	3m 47s
build (-DOPENMP=off, -DWITH_YAML=on, -DCMAKE_BUILD_TYPE=Release)	11m 44s
build (-DOPENMP=off, -DWITH_YAML=on, -DCMAKE_BUILD_TYPE=Debug)	3m 32s
build (-DOPENMP=off, -DWITH_YAML=on, -DUSE_DEPRECATED_IO=on, -DCMAKE_BUILD_TYPE=Release)	12m 38s
build (-DOPENMP=off, -DWITH_YAML=on, -DUSE_DEPRECATED_IO=on, -DCMAKE_BUILD_TYPE=Debug)	3m 57s
	2h 6m 55s

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