ci: update test

RIVM-bioinformatics · Feb 6, 2024 · a50065b · a50065b
1 parent ff69a2f
commit a50065b
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/tests/test_juno_mapping.py b/tests/test_juno_mapping.py
@@ -147,7 +147,7 @@ def test_junomapping_dryrun_changed_user_params(self) -> None:
                 "--reference",
                 "reference.fasta",
                 "--disable-mask",
-                "-maf",
+                "-smaf",
                 "0.5",
                 "-md",
                 "20",
@@ -159,7 +159,7 @@ def test_junomapping_dryrun_changed_user_params(self) -> None:
         expected_user_param_values = {
             "species": "mycobacterium_tuberculosis",
             "reference": "reference.fasta",
-            "minimum_allele_frequency": 0.5,
+            "soft_filter_minimum_allele_frequency": 0.5,
             "minimum_depth": 20,
             "disable_mask": "True",
             "mask_bed": "None",