Skip to content

Commit

Permalink
bugfix
Browse files Browse the repository at this point in the history
  • Loading branch information
TCLamnidis authored Nov 29, 2019
1 parent 38640be commit bb8acb5
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion Sex.DetERRmine.py
Original file line number Diff line number Diff line change
Expand Up @@ -33,7 +33,7 @@ def CalcErrors(AutSnps, XSnps, YSnps, NrAut, NrX, NrY):
parser = argparse.ArgumentParser(description="Calculate the relative X- and Y-chromosome coverage of data, as well as the associated error bars for each.")
parser.add_argument("-I", "--Input", metavar="<INPUT FILE>", type=argparse.FileType('r'), help="The input samtools depth file. Omit to read from stdin.", required=False)
parser.add_argument("-f", "--SampleList", type=argparse.FileType('r'), help="A list of samples/bams that were in the depth file. One per line. Should be in the order of the samtools depth output.")
parser.add_argument("-v", "--version", type="store_true", help="Print the version of the script and exit.")
parser.add_argument("-v", "--version", action="store_true", help="Print the version of the script and exit.")
args = parser.parse_args()

if args.version:
Expand Down

0 comments on commit bb8acb5

Please sign in to comment.