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✨🧪 Add missing
qes-1.0.xsd
schema and XML parsing tests
The first schema used for the XML output of Quantum ESPRESSO `pw.x` was still missing. Here it is added, along with a set of tests for the XML parsing of default runs.
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tests/outputs/fixtures/pw/default_xml_190304/data-file-schema.xml
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tests/outputs/fixtures/pw/default_xml_191206/data-file-schema.xml
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tests/outputs/fixtures/pw/default_xml_200420/data-file-schema.xml
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Program PWSCF v.6.6 starts on 2Sep2020 at 22:42:40 | ||
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This program is part of the open-source Quantum ESPRESSO suite | ||
for quantum simulation of materials; please cite | ||
"P. Giannozzi et al., J. Phys.:Condens. Matter 21 395502 (2009); | ||
"P. Giannozzi et al., J. Phys.:Condens. Matter 29 465901 (2017); | ||
URL http://www.quantum-espresso.org", | ||
in publications or presentations arising from this work. More details at | ||
http://www.quantum-espresso.org/quote | ||
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Serial version | ||
Fft bands division: nmany = 1 | ||
Reading input from aiida.in | ||
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Current dimensions of program PWSCF are: | ||
Max number of different atomic species (ntypx) = 10 | ||
Max number of k-points (npk) = 40000 | ||
Max angular momentum in pseudopotentials (lmaxx) = 3 | ||
Message from routine setup: | ||
using ibrav=0 with symmetry is DISCOURAGED, use correct ibrav instead | ||
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G-vector sticks info | ||
-------------------- | ||
sticks: dense smooth PW G-vecs: dense smooth PW | ||
Sum 847 433 127 16529 5817 965 | ||
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bravais-lattice index = 0 | ||
lattice parameter (alat) = 7.1903 a.u. | ||
unit-cell volume = 262.8607 (a.u.)^3 | ||
number of atoms/cell = 2 | ||
number of atomic types = 1 | ||
number of electrons = 8.00 | ||
number of Kohn-Sham states= 4 | ||
kinetic-energy cutoff = 30.0000 Ry | ||
charge density cutoff = 240.0000 Ry | ||
convergence threshold = 1.0E-06 | ||
mixing beta = 0.7000 | ||
number of iterations used = 8 plain mixing | ||
Exchange-correlation= PBE | ||
( 1 4 3 4 0 0 0) | ||
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celldm(1)= 7.190298 celldm(2)= 0.000000 celldm(3)= 0.000000 | ||
celldm(4)= 0.000000 celldm(5)= 0.000000 celldm(6)= 0.000000 | ||
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crystal axes: (cart. coord. in units of alat) | ||
a(1) = ( 0.000000 0.707107 0.707107 ) | ||
a(2) = ( 0.707107 0.000000 0.707107 ) | ||
a(3) = ( 0.707107 0.707107 0.000000 ) | ||
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reciprocal axes: (cart. coord. in units 2 pi/alat) | ||
b(1) = ( -0.707107 0.707107 0.707107 ) | ||
b(2) = ( 0.707107 -0.707107 0.707107 ) | ||
b(3) = ( 0.707107 0.707107 -0.707107 ) | ||
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PseudoPot. # 1 for Si read from file: | ||
./pseudo/Si.pbe-n-rrkjus_psl.1.0.0.UPF | ||
MD5 check sum: 0b0bb1205258b0d07b9f9672cf965d36 | ||
Pseudo is Ultrasoft + core correction, Zval = 4.0 | ||
Generated using "atomic" code by A. Dal Corso v.5.1 | ||
Using radial grid of 1141 points, 6 beta functions with: | ||
l(1) = 0 | ||
l(2) = 0 | ||
l(3) = 1 | ||
l(4) = 1 | ||
l(5) = 2 | ||
l(6) = 2 | ||
Q(r) pseudized with 0 coefficients | ||
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atomic species valence mass pseudopotential | ||
Si 4.00 28.08550 Si( 1.00) | ||
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...... SYMMETRIES REMOVED | ||
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Cartesian axes | ||
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site n. atom positions (alat units) | ||
1 Si tau( 1) = ( 0.0000000 0.0000000 0.0000000 ) | ||
2 Si tau( 2) = ( 0.3535534 1.0606602 1.0606602 ) | ||
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Crystallographic axes | ||
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site n. atom positions (cryst. coord.) | ||
1 Si tau( 1) = ( 0.0000000 0.0000000 0.0000000 ) | ||
2 Si tau( 2) = ( 1.2500000 0.2500000 0.2500000 ) | ||
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number of k points= 3 | ||
cart. coord. in units 2pi/alat | ||
k( 1) = ( 0.0000000 0.0000000 0.0000000), wk = 0.2500000 | ||
k( 2) = ( -0.3535534 -0.3535534 0.3535534), wk = 1.0000000 | ||
k( 3) = ( -0.7071068 0.0000000 0.0000000), wk = 0.7500000 | ||
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cryst. coord. | ||
k( 1) = ( 0.0000000 0.0000000 0.0000000), wk = 0.2500000 | ||
k( 2) = ( 0.0000000 0.0000000 -0.5000000), wk = 1.0000000 | ||
k( 3) = ( 0.0000000 -0.5000000 -0.5000000), wk = 0.7500000 | ||
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Dense grid: 16529 G-vectors FFT dimensions: ( 36, 36, 36) | ||
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Smooth grid: 5817 G-vectors FFT dimensions: ( 32, 32, 32) | ||
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Dynamical RAM for wfc: 0.04 MB | ||
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Dynamical RAM for wfc (w. buffer): 0.18 MB | ||
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Dynamical RAM for str. fact: 0.25 MB | ||
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Dynamical RAM for local pot: 0.00 MB | ||
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Dynamical RAM for nlocal pot: 0.40 MB | ||
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Dynamical RAM for qrad: 1.24 MB | ||
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Dynamical RAM for rho,v,vnew: 1.82 MB | ||
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Dynamical RAM for rhoin: 0.61 MB | ||
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Dynamical RAM for rho*nmix: 4.04 MB | ||
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Dynamical RAM for G-vectors: 0.99 MB | ||
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Dynamical RAM for h,s,v(r/c): 0.00 MB | ||
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Dynamical RAM for <psi|beta>: 0.00 MB | ||
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Dynamical RAM for psi: 0.09 MB | ||
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Dynamical RAM for hpsi: 0.09 MB | ||
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Dynamical RAM for spsi: 0.09 MB | ||
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Dynamical RAM for wfcinit/wfcrot: 0.18 MB | ||
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Dynamical RAM for addusdens: 47.42 MB | ||
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Estimated static dynamical RAM per process > 11.82 MB | ||
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Estimated max dynamical RAM per process > 59.23 MB | ||
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Initial potential from superposition of free atoms | ||
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starting charge 7.99888, renormalised to 8.00000 | ||
Starting wfcs are 8 randomized atomic wfcs | ||
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total cpu time spent up to now is 1.3 secs | ||
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Self-consistent Calculation | ||
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iteration # 1 ecut= 30.00 Ry beta= 0.70 | ||
Davidson diagonalization with overlap | ||
ethr = 1.00E-02, avg # of iterations = 2.0 | ||
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total cpu time spent up to now is 1.6 secs | ||
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total energy = -22.63899202 Ry | ||
estimated scf accuracy < 0.10168216 Ry | ||
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iteration # 2 ecut= 30.00 Ry beta= 0.70 | ||
Davidson diagonalization with overlap | ||
ethr = 1.27E-03, avg # of iterations = 1.3 | ||
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total cpu time spent up to now is 1.9 secs | ||
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total energy = -22.64405411 Ry | ||
estimated scf accuracy < 0.00628700 Ry | ||
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iteration # 3 ecut= 30.00 Ry beta= 0.70 | ||
Davidson diagonalization with overlap | ||
ethr = 7.86E-05, avg # of iterations = 3.0 | ||
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total cpu time spent up to now is 2.2 secs | ||
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total energy = -22.64588124 Ry | ||
estimated scf accuracy < 0.00023262 Ry | ||
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iteration # 4 ecut= 30.00 Ry beta= 0.70 | ||
Davidson diagonalization with overlap | ||
ethr = 2.91E-06, avg # of iterations = 2.7 | ||
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total cpu time spent up to now is 2.4 secs | ||
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total energy = -22.64594834 Ry | ||
estimated scf accuracy < 0.00011265 Ry | ||
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iteration # 5 ecut= 30.00 Ry beta= 0.70 | ||
Davidson diagonalization with overlap | ||
ethr = 1.41E-06, avg # of iterations = 2.0 | ||
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total cpu time spent up to now is 2.6 secs | ||
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total energy = -22.64596419 Ry | ||
estimated scf accuracy < 0.00000228 Ry | ||
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iteration # 6 ecut= 30.00 Ry beta= 0.70 | ||
Davidson diagonalization with overlap | ||
ethr = 2.85E-08, avg # of iterations = 5.3 | ||
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total cpu time spent up to now is 2.8 secs | ||
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End of self-consistent calculation | ||
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k = 0.0000 0.0000 0.0000 ( 725 PWs) bands (ev): | ||
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-5.4152 6.8000 6.8000 6.8000 | ||
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occupation numbers | ||
1.0000 1.0000 1.0000 1.0000 | ||
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k =-0.3536-0.3536 0.3536 ( 718 PWs) bands (ev): | ||
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-2.9919 -0.3789 5.5453 5.5453 | ||
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occupation numbers | ||
1.0000 1.0000 1.0000 1.0000 | ||
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k =-0.7071 0.0000 0.0000 ( 740 PWs) bands (ev): | ||
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-1.1471 -1.1471 3.8040 3.8040 | ||
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occupation numbers | ||
1.0000 1.0000 1.0000 1.0000 | ||
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highest occupied level (ev): 6.8000 | ||
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! total energy = -22.64596645 Ry | ||
estimated scf accuracy < 0.00000017 Ry | ||
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The total energy is the sum of the following terms: | ||
one-electron contribution = 5.48870698 Ry | ||
hartree contribution = 1.24591683 Ry | ||
xc contribution = -12.42867343 Ry | ||
ewald contribution = -16.95191684 Ry | ||
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convergence has been achieved in 6 iterations | ||
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Writing output data file ./out/aiida.save/ | ||
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init_run : 0.61s CPU 0.67s WALL ( 1 calls) | ||
electrons : 1.25s CPU 1.52s WALL ( 1 calls) | ||
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Called by init_run: | ||
wfcinit : 0.03s CPU 0.05s WALL ( 1 calls) | ||
wfcinit:atom : 0.00s CPU 0.00s WALL ( 3 calls) | ||
wfcinit:wfcr : 0.02s CPU 0.02s WALL ( 3 calls) | ||
potinit : 0.05s CPU 0.05s WALL ( 1 calls) | ||
hinit0 : 0.47s CPU 0.47s WALL ( 1 calls) | ||
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Called by electrons: | ||
c_bands : 0.23s CPU 0.23s WALL ( 6 calls) | ||
sum_band : 0.45s CPU 0.59s WALL ( 6 calls) | ||
v_of_rho : 0.25s CPU 0.26s WALL ( 7 calls) | ||
v_h : 0.01s CPU 0.01s WALL ( 7 calls) | ||
v_xc : 0.24s CPU 0.26s WALL ( 7 calls) | ||
newd : 0.38s CPU 0.52s WALL ( 7 calls) | ||
mix_rho : 0.02s CPU 0.02s WALL ( 6 calls) | ||
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Called by c_bands: | ||
init_us_2 : 0.01s CPU 0.01s WALL ( 39 calls) | ||
cegterg : 0.20s CPU 0.20s WALL ( 18 calls) | ||
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Called by sum_band: | ||
sum_band:wei : 0.00s CPU 0.00s WALL ( 6 calls) | ||
sum_band:loo : 0.03s CPU 0.03s WALL ( 6 calls) | ||
sum_band:buf : 0.00s CPU 0.00s WALL ( 18 calls) | ||
sum_band:ini : 0.01s CPU 0.01s WALL ( 18 calls) | ||
sum_band:cal : 0.00s CPU 0.00s WALL ( 18 calls) | ||
sum_band:bec : 0.00s CPU 0.00s WALL ( 18 calls) | ||
addusdens : 0.35s CPU 0.48s WALL ( 6 calls) | ||
addusd:skk : 0.00s CPU 0.00s WALL ( 6 calls) | ||
addusd:dgemm : 0.10s CPU 0.20s WALL ( 6 calls) | ||
addusd:qvan2 : 0.19s CPU 0.19s WALL ( 6 calls) | ||
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Called by *egterg: | ||
cdiaghg : 0.00s CPU 0.00s WALL ( 67 calls) | ||
cegterg:over : 0.00s CPU 0.00s WALL ( 49 calls) | ||
cegterg:upda : 0.00s CPU 0.00s WALL ( 49 calls) | ||
cegterg:last : 0.00s CPU 0.00s WALL ( 44 calls) | ||
h_psi : 0.20s CPU 0.20s WALL ( 70 calls) | ||
s_psi : 0.01s CPU 0.01s WALL ( 70 calls) | ||
g_psi : 0.00s CPU 0.00s WALL ( 49 calls) | ||
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Called by h_psi: | ||
h_psi:calbec : 0.02s CPU 0.02s WALL ( 70 calls) | ||
vloc_psi : 0.16s CPU 0.17s WALL ( 70 calls) | ||
add_vuspsi : 0.01s CPU 0.01s WALL ( 70 calls) | ||
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General routines | ||
calbec : 0.02s CPU 0.02s WALL ( 88 calls) | ||
fft : 0.08s CPU 0.08s WALL ( 89 calls) | ||
ffts : 0.01s CPU 0.01s WALL ( 13 calls) | ||
fftw : 0.15s CPU 0.16s WALL ( 566 calls) | ||
interpolate : 0.01s CPU 0.01s WALL ( 7 calls) | ||
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PWSCF : 2.48s CPU 2.88s WALL | ||
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This run was terminated on: 22:42:43 2Sep2020 | ||
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=------------------------------------------------------------------------------= | ||
JOB DONE. | ||
=------------------------------------------------------------------------------= |
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