chore: update tutorials to use newest API

CHANGELOG.md

@@ -8,7 +8,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 ## [Unreleased]
 
 ### Added
-- Added 3 tutorials and embended existing colab tutorial in it.
+- Added 3 tutorials and embedded existing colab tutorial in it.
 - Support artifacts for each optimizer based on evaluated trials.
 - Add a generic structure for the filesystem writers.
 - Add live_plots flag for run() API to print the generic and optimizer-specific plots

CITATION.cff

@@ -1,40 +1,46 @@
 cff-version: 1.2.0
 message: "If you use this software, please cite it as below."
 authors:
-  - family-names: Stoll
-    given-names: Danny
+  - family-names: Alipour
+    given-names: Nastaran
   - family-names: Mallik
     given-names: Neeratyoy
   - family-names: Bergman
     given-names: Eddie
+  - family-names: Geburek
+    given-names: Anton Merlin
   - family-names: Schrodi
     given-names: Simon
   - family-names: Basu
     given-names: Soham
-  - family-names: Geburek
-    given-names: Anton Merlin
+  - family-names: Birinxhiku
+    given-names: Lum
   - family-names: Abou Chakra
     given-names: Tarek
   - family-names: Garibov
     given-names: Samir
   - family-names: Gaur
     given-names: Gopalji
-  - family-names: Alipour
-    given-names: Nastaran
   - family-names: Janowski
     given-names: Maciej
-  - family-names: Hvarfner
-    given-names: Carl
-  - family-names: Carstensen
-    given-names: Timur
   - family-names: Mekic
     given-names: Ema
+  - family-names: Ambattu
+    given-names: Philip Alex
   - family-names: Rogalla
     given-names: Daniel
+  - family-names: Hvarfner
+    given-names: Carl
   - family-names: Binxin
     given-names: Ru
+  - family-names: Carstensen
+    given-names: Timur
+  - family-names: Hog
+    given-names: Johannes
   - family-names: Hutter
     given-names: Frank
+  - family-names: Stoll
+    given-names: Danny
 title: "Neural Pipeline Search (NePS)"
 version: 0.16.0
 date-released: 2025-04-11

CONTRIBUTING.md

@@ -14,7 +14,7 @@ Automatic checks are run on every pull request and on every commit to `master`.
 
 ## Installation
 
-There are four steps: 
+There are four steps:
 
 1. Install uv
 1. Clone the neps repository
@@ -211,6 +211,10 @@ To publish the documentation run
 mike deploy 0.5.1 latest -p
 ```
 
+## Tutorials
+
+See [tutorials README](./tutorials/README.md).
+
 ## Releasing a New Version
 
 There are four steps to releasing a new version of neps:
@@ -250,7 +254,7 @@ mike serve
 
 and then looking at it.
 
-Update the citations page.
+Update the citation.cff page and citations.md page in the `docs` directory and in `pyproject.toml`.
 
 Afterwards, publish it via
 

docs/citations.md

@@ -7,19 +7,19 @@ For citing NePS, please refer to the following:
 ### APA Style
 
 ```apa
-Stoll, D., Mallik, N., Bergman, E., Schrodi, S., Basu, S., Geburek, A. M., Abou Chakra, T., Garibov, S., Gaur, G., Alipour, N., Janowski, M., Hvarfner, C., Mekic, E., Carstensen, T., Rogalla, D., Ru, B., & Hutter, F. (2023). Neural Pipeline Search (NePS) (Version 0.12.2) [Computer software]. https://github.com/automl/neps
+Nastaran A., Mallik, N., Bergman, E., Geburek, A. M., Schrodi, S., Basu, S., Birinxhiku, L., Abou Chakra, T., Garibov, S., Gaur, G., Alipour, N., Janowski, M., Hvarfner, C., Mekic, E., Carstensen, T., Rogalla, D., Ru, B., Hutter, F. & Stoll, D. (2026). Neural Pipeline Search (NePS) (Version 0.16.0) [Computer software]. https://github.com/automl/neps
 ```
 
 ### BibTex Style
 
 ```bibtex
-@software{Stoll_Neural_Pipeline_Search_2023,
-author = {Stoll, Danny and Mallik, Neeratyoy and Schrodi, Simon and Bergmann, Eddie and Janowski, Maciej and Garibov, Samir and Abou Chakra, Tarek and Rogalla, Daniel and Bergman, Eddie and Hvarfner, Carl and Binxin, Ru and Hutter, Frank},
-month = oct,
+@software{Stoll_Neural_Pipeline_Search_2026,
+author = {Nastaran Alipour, Neeratyoy Mallik, Eddie Bergman, Anton Merlin Geburek, Simon Schrodi, Soham Basu, Lum Birinxhiku, Tarek Abou Chakra, Samir Garibov, Gopalji Gaur, Maciej Janowski, Ema Mekic, Philip Alex Ambattu, Daniel Rogalla, Carl Hvarfner, Binxin Ru, Timur Carstensen, Johannes Hog, Frank Hutter and Danny Stoll},
+month = sep,
 title = {{Neural Pipeline Search (NePS)}},
 url = {https://github.com/automl/neps},
-version = {0.12.2},
-year = {2024}
+version = {0.16.0},
+year = {2026}
 }
 ```
 

pyproject.toml

@@ -3,23 +3,26 @@ name = "neural-pipeline-search"
 version = "v0.16.0"
 description = "Neural Pipeline Search helps deep learning experts find the best neural pipeline."
 authors = [
-    { name = "Danny Stoll", email = "stolld@cs.uni-freiburg.de" },
-    { name = "Neeratyoy Mallik", email = "mallik@cs.uni-freiburg.de" },
+    { name = "Nastaran Alipour", email = "alipourn@cs.uni-freiburg.de" },
+    { name = "Neeratyoy Mallik"},
     { name = "Eddie Bergman" },
+    { name = "Anton Merlin Geburek" },
     { name = "Simon Schrodi" },
     { name = "Soham Basu" },
-    { name = "Anton Merlin Geburek" },
+    { name = "Lum Birinxhiku" },
     { name = "Tarek Abou Chakra" },
     { name = "Samir Garibov" },
     { name = "Gopalji Gaur" },
-    { name = "Nastaran Alipour", email = "mallik@cs.uni-freiburg.de" },
     { name = "Maciej Janowski" },
-    { name = "Carl Hvarfner" },
-    { name = "Timur Carstensen" },
     { name = "Ema Mekic" },
+    { name = "Philip Alex Ambattu" },
     { name = "Daniel Rogalla" },
+    { name = "Carl Hvarfner" },
     { name = "Binxin Ru" },
+    { name = "Timur Carstensen" },
+    { name = "Johannes Hog" },
     { name = "Frank Hutter" },
+    { name = "Danny Stoll", email = "stolld@cs.uni-freiburg.de" },
 ]
 readme = "README.md"
 license = { file = "LICENSE" }