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Glm pca devel #21

Merged
merged 18 commits into from
Feb 25, 2024
Merged

Glm pca devel #21

merged 18 commits into from
Feb 25, 2024

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vivekbhr
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@vivekbhr vivekbhr commented Nov 5, 2023

  • New jupyter notebook for scDNA-me analysis using glmPCA
  • Rebased glm_pca branch of @saroudant to develop (glm_pca was pulled from master, which caused merge conflict)

@vivekbhr vivekbhr changed the base branch from master to develop November 5, 2023 13:29
@vivekbhr vivekbhr mentioned this pull request Nov 5, 2023
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codecov bot commented Nov 5, 2023

Codecov Report

Attention: Patch coverage is 50.76923% with 64 lines in your changes are missing coverage. Please review.

Project coverage is 4.98%. Comparing base (69d3bf8) to head (d7d4277).
Report is 12 commits behind head on develop.

❗ Current head d7d4277 differs from pull request most recent head d194f93. Consider uploading reports for the commit d194f93 to get more accurate results

Additional details and impacted files
@@            Coverage Diff             @@
##           develop     #21      +/-   ##
==========================================
+ Coverage         0   4.98%   +4.98%     
==========================================
  Files            0      28      +28     
  Lines            0    2906    +2906     
==========================================
+ Hits             0     145     +145     
- Misses           0    2761    +2761     
Flag Coverage Δ
unittests 4.98% <50.76%> (?)

Flags with carried forward coverage won't be shown. Click here to find out more.

Files Coverage Δ
sincei/tests/test_ExponentialFamily.py 100.00% <100.00%> (ø)
sincei/tests/test_GLMPCA.py 100.00% <100.00%> (ø)
sincei/WriteBedGraph.py 0.00% <0.00%> (ø)
sincei/scBulkCoverage.py 0.00% <0.00%> (ø)
sincei/GLMPCA.py 0.00% <0.00%> (ø)
sincei/ExponentialFamily.py 0.00% <0.00%> (ø)

... and 22 files with indirect coverage changes

@vivekbhr vivekbhr merged commit 4eacef7 into develop Feb 25, 2024
3 checks passed
@vivekbhr vivekbhr deleted the glm_pca_devel branch February 25, 2024 14:09
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