test regen from actions

.github/workflows/regenerate_artifacts.yaml → .github/workflows/regenerate-artifacts.yaml

@@ -5,7 +5,7 @@ name: Regenerate Biolink Model Artifacts
 on:
   push:
     branches:
-      - master
+      - doc-refactor
   repository_dispatch:
     types: trigger-build-artifacts
 
@@ -32,21 +32,19 @@ jobs:
         run: |
           sudo apt-get update
           sudo apt-get install -y build-essential git wget curl
-          sudo apt-get install -y openjdk-8-jre
-          wget https://github.com/joelittlejohn/jsonschema2pojo/releases/download/jsonschema2pojo-1.0.2/jsonschema2pojo-1.0.2.tar.gz
-          tar -xvzf jsonschema2pojo-1.0.2.tar.gz
           pip install poetry
 
       - name: Generate Biolink Model artifacts
         run: |
-          export PATH=$PATH:`pwd`/jsonschema2pojo-1.0.2/bin
           make gen-project
           if [ $? -eq 0 ]; then
             git config --local user.email "[email protected]"
             git config --local user.name "GitHub Action"
-            git add project/*
-            git commit -m "Regenerate artifacts from biolink-model.yaml"
-            git push
+            # git add project/*
+            # git add src/*
+            # git add 
+            # git commit -m "Regenerate artifacts from biolink-model.yaml"
+            # git push
           else
             echo "'make' gen-project failed to finish successfully"
           fi

src/doc-templates/class.md.jinja2

@@ -1,6 +1,6 @@
 # <strong>  Class: {{ gen.name(element) }} </strong> {% if element.deprecated %} <span style="color: red;"><strong> (DEPRECATED) </strong></span>{% endif %}{% if element.abstract %}<span style="color: purple;"><strong> (Abstract Class) </strong>:</span> {% endif %}
 {% if element.description or element.aliases or element.multivalued or element.required or element.domain or element.range or element.inverse %}
-<div class="highlight-box"> <strong>Description:</strong> <i>{{ element.description }}</i>
+<div class="highlight-box">{% if element.description %}<strong>Description:</strong><i> {{ element.description }}</i><br>{% endif %}
   {% if element.aliases %}<strong>Aliases:</strong> {{ element.aliases | join(', ') }}<br>{% endif -%}
   {% if element.multivalued %}<strong>Multivalued:</strong> {{ element.multivalued }}<br>{% endif -%}
   {% if element.required %}<strong>Required:</strong> {{ element.required }}<br>{% endif %}

src/doc-templates/slot.md.jinja2

@@ -1,6 +1,6 @@
 # <strong> Slot: {{ gen.name(element) }} </strong> {% if element.deprecated %} <span style="color: red;"><strong> (DEPRECATED) </strong></span> {% endif %}{% if element.abstract %}<span style="color: purple;"><strong> (Abstract Slot) </strong></span> {% endif %}{% if element.multivalued %} (multivalued){% endif -%}
 {% if element.description or element.aliases or element.multivalued or element.required or element.domain or element.range or element.inverse %}
-<div class="highlight-box"> <strong>Description:</strong><i> {{ element.description }}</i>
+<div class="highlight-box">{% if element.description %}<strong>Description:</strong><i> {{ element.description }}</i><br>{% endif %}
   {% if element.aliases %} <strong>Aliases:</strong> {{ element.aliases | join(', ') }}<br>{% endif -%}
   {% if element.domain %}<strong>Domain:</strong> {{ element.domain }}<br>{% endif %}
   {% if element.range %}<strong>Range:</strong> {{ element.range }}<br>{% endif %}