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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,42 +1,42 @@ | ||
| Pipeline Name Version Date of Last Commit | ||
| Optimus 7.6.0 2024-08-06 | ||
| Multiome 5.5.0 2024-08-06 | ||
| MultiSampleSmartSeq2SingleNucleus 1.4.2 2024-08-25-02 | ||
| MultiSampleSmartSeq2 2.2.21 2023-04-19 | ||
| PairedTag 1.5.0 2024-08-06 | ||
| Optimus 7.6.0 2024-08-06 | ||
| atac 2.2.3 2024-08-02 | ||
| SlideSeq 3.4.0 2024-08-06 | ||
| snm3C 4.0.4 2024-08-06 | ||
| MultiSampleSmartSeq2SingleNucleus 1.4.2 2024-08-25-02 | ||
| scATAC 1.3.2 2023-08-03 | ||
| SmartSeq2SingleSample 5.1.20 2023-04-19 | ||
| Multiome 5.5.0 2024-08-06 | ||
| scATAC 1.3.2 2023-08-03 | ||
| BuildIndices 3.0.0 2023-12-06 | ||
| MultiSampleSmartSeq2 2.2.21 2023-04-19 | ||
| CEMBA 1.1.6 2023-12-18 | ||
| SlideSeq 3.4.0 2024-08-06 | ||
| BuildCembaReferences 1.0.0 2020-11-15 | ||
| UltimaGenomicsWholeGenomeCramOnly 1.0.20 2024-08-02 | ||
| CEMBA 1.1.6 2023-12-18 | ||
| GDCWholeGenomeSomaticSingleSample 1.3.2 2024-08-02 | ||
| ExomeGermlineSingleSample 3.1.22 2024-06-12 | ||
| UltimaGenomicsWholeGenomeGermline 1.0.20 2024-08-02 | ||
| WholeGenomeGermlineSingleSample 3.2.1 2024-06-12 | ||
| VariantCalling 2.2.1 2024-06-12 | ||
| UltimaGenomicsWholeGenomeCramOnly 1.0.20 2024-08-02 | ||
| JointGenotypingByChromosomePartOne 1.4.12 2023-12-18 | ||
| JointGenotypingByChromosomePartTwo 1.4.11 2023-12-18 | ||
| UltimaGenomicsJointGenotyping 1.1.7 2023-12-18 | ||
| JointGenotyping 1.6.10 2023-12-18 | ||
| ReblockGVCF 2.2.1 2024-06-12 | ||
| JointGenotypingByChromosomePartTwo 1.4.11 2023-12-18 | ||
| JointGenotypingByChromosomePartOne 1.4.12 2023-12-18 | ||
| ExternalExomeReprocessing 3.2.2 2024-08-02 | ||
| ExternalWholeGenomeReprocessing 2.2.2 2024-08-02 | ||
| ExomeReprocessing 3.2.2 2024-08-02 | ||
| CramToUnmappedBams 1.1.3 2024-08-02 | ||
| WholeGenomeReprocessing 3.2.2 2024-08-02 | ||
| IlluminaGenotypingArray 1.12.21 2024-08-02 | ||
| Arrays 2.6.27 2024-08-02 | ||
| MultiSampleArrays 1.6.2 2024-08-02 | ||
| VariantCalling 2.2.1 2024-06-12 | ||
| WholeGenomeGermlineSingleSample 3.2.1 2024-06-12 | ||
| UltimaGenomicsWholeGenomeGermline 1.0.20 2024-08-02 | ||
| ExomeGermlineSingleSample 3.1.22 2024-06-12 | ||
| ValidateChip 1.16.5 2024-08-02 | ||
| Arrays 2.6.27 2024-08-02 | ||
| Imputation 1.1.13 2024-05-21 | ||
| RNAWithUMIsPipeline 1.0.16 2023-12-18 | ||
| MultiSampleArrays 1.6.2 2024-08-02 | ||
| BroadInternalUltimaGenomics 1.0.21 2024-08-02 | ||
| BroadInternalArrays 1.1.11 2024-08-02 | ||
| BroadInternalImputation 1.1.12 2024-08-02 | ||
| BroadInternalRNAWithUMIs 1.0.33 2024-08-02 | ||
| CramToUnmappedBams 1.1.3 2024-08-02 | ||
| ExternalWholeGenomeReprocessing 2.2.2 2024-08-02 | ||
| ExternalExomeReprocessing 3.2.2 2024-08-02 | ||
| WholeGenomeReprocessing 3.2.2 2024-08-02 | ||
| ExomeReprocessing 3.2.2 2024-08-02 | ||
| IlluminaGenotypingArray 1.12.21 2024-08-02 | ||
| CheckFingerprint 1.0.20 2024-08-02 | ||
| AnnotationFiltration 1.2.5 2023-12-18 | ||
| RNAWithUMIsPipeline 1.0.16 2023-12-18 |