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add pairedtag diagram and fix snm3c slug #1469

Merged
merged 5 commits into from
Jan 9, 2025
Merged

add pairedtag diagram and fix snm3c slug #1469

merged 5 commits into from
Jan 9, 2025

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rsc3
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@rsc3 rsc3 commented Jan 7, 2025

Description

Give your PR a concise yet descriptive title.
Please explain the changes you made here.

Added the pairedtag diagram from the lucidchart and fixed an error in the snm3c methods slug position


Checklist

If you can answer "yes" to the following items, please add a checkmark next to the appropriate checklist item(s) and notify our WARP team by tagging @broadinstitute/warp-admins in a comment on this PR.

  • Did you add inputs, outputs, or tasks to a workflow?
  • Did you modify, delete or move: file paths, file names, input names, output names, or task names?
  • If you made a changelog update, did you update the pipeline version number?

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github-actions bot commented Jan 7, 2025

Remember to squash merge!

@rsc3 rsc3 requested a review from ekiernan January 7, 2025 23:58
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github-actions bot commented Jan 7, 2025

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

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github-actions bot commented Jan 7, 2025

🔍Changelog Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

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github-actions bot commented Jan 8, 2025

Remember to squash merge!

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github-actions bot commented Jan 8, 2025

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

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github-actions bot commented Jan 8, 2025

🔍Changelog Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

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rsc3 commented Jan 8, 2025

How to run docusaurus to preview the website:

  • first you need yarn, which is installed with npm mac install
  • then you need to build the local website in the root of the docs directory warp/website
    • yarn --cwd=website install
    • yarn --cwd=website start
    • the local website should popup in your default browser

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rsc3 commented Jan 9, 2025

You can see a github preview quickly just looking at the README:
https://github.com/broadinstitute/warp/tree/rc-pd-2837/website/docs/Pipelines/PairedTag_Pipeline

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github-actions bot commented Jan 9, 2025

Remember to squash merge!

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github-actions bot commented Jan 9, 2025

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

Copy link

github-actions bot commented Jan 9, 2025

🔍Changelog Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

Copy link

github-actions bot commented Jan 9, 2025

Remember to squash merge!

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github-actions bot commented Jan 9, 2025

🔍Changelog Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

Copy link

github-actions bot commented Jan 9, 2025

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

Copy link

github-actions bot commented Jan 9, 2025

Remember to squash merge!

Copy link

github-actions bot commented Jan 9, 2025

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

Copy link

github-actions bot commented Jan 9, 2025

🔍Changelog Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

@rsc3 rsc3 merged commit a7b1952 into develop Jan 9, 2025
12 checks passed
@rsc3 rsc3 deleted the rc-pd-2837 branch January 9, 2025 20:38
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3 participants