Issues

• Update to latest GKM schemas

  cancervariants/gene-normalization#451 · Filter by author jsstevenson opened on Oct 9, 2026

• Add gene descriptions

  enhancement
  cancervariants/gene-normalization#430 · Filter by author jsstevenson opened on Dec 2, 2025

• Update s3 uri for postgresql latest dump

  documentationgood first issuepriority:low
  cancervariants/gene-normalization#425 · Filter by author korikuzma opened on Sep 24, 2025

• PostgresDatabase recreates schema on startup

  bug
  cancervariants/gene-normalization#424 · Filter by author zealws opened on Sep 15, 2025
  

• GitHub Actions for Docker Build and Push to Docker Hub and GHCR

  enhancement
  cancervariants/gene-normalization#402 · Filter by author alexsigaras opened on Mar 17, 2025

• Refactor/rename environment configuration

  enhancementpriority:low
  cancervariants/gene-normalization#391 · Filter by author jsstevenson opened on Jan 2, 2025

• Search genes by location

  enhancementpriority:medium
  cancervariants/gene-normalization#368 · Filter by author korikuzma opened on Jul 22, 2024
  

• Fix strand enum

  priority:mediumtechnical debt
  cancervariants/gene-normalization#350 · Filter by author jsstevenson opened on Jul 3, 2024

• Catch unrecognized/non-existing Dynamo table

  enhancementpriority:low
  cancervariants/gene-normalization#347 · Filter by author jsstevenson opened on Jun 5, 2024

• Provide -y/--assume-yes option for CLI commands

  enhancementpriority:medium
  cancervariants/gene-normalization#343 · Filter by author jsstevenson opened on Jun 2, 2024

• Use stdlib mock instead of installing package

  priority:lowtechnical debt
  cancervariants/gene-normalization#341 · Filter by author jsstevenson opened on May 9, 2024

• Altering record tables requires invalidating/deleting merged data

  bugpriority:medium
  cancervariants/gene-normalization#340 · Filter by author jsstevenson opened on Apr 30, 2024
  1

• Interface overhaul epic

  epicpriority:medium
  cancervariants/gene-normalization#332 · Filter by author jsstevenson opened on Apr 12, 2024
  2

• Add "last updated" item to DB

  enhancementpriority:low
  cancervariants/gene-normalization#331 · Filter by author jsstevenson opened on Apr 11, 2024
  2

• Rehome the "strand" extension

  priority:low
  cancervariants/gene-normalization#314 · Filter by author jsstevenson opened on Dec 15, 2023
  1

• Store SSSOM mapping predicates for xrefs

  enhancementpriority:low
  cancervariants/gene-normalization#313 · Filter by author jsstevenson opened on Dec 15, 2023
  1

• Clean up API elements

  enhancementpriority:low
  cancervariants/gene-normalization#296 · Filter by author jsstevenson opened on Nov 15, 2023
  1

• Clean up search interface elements

  enhancement
  cancervariants/gene-normalization#295 · Filter by author jsstevenson opened on Nov 15, 2023

• Clean up DB interface elements

  enhancement
  cancervariants/gene-normalization#294 · Filter by author jsstevenson opened on Nov 15, 2023

• Investigate alternatives to gffutils in-memory data

  performancepriority:mediumtechnical debt
  cancervariants/gene-normalization#264 · Filter by author jsstevenson opened on Sep 28, 2023
  3

• Store HGNC locations as sequence location

  enhancement
  cancervariants/gene-normalization#259 · Filter by author korikuzma opened on Sep 26, 2023

• Consider using GKS MappableConcept in search response

  enhancementpriority:low
  cancervariants/gene-normalization#251 · Filter by author korikuzma opened on Sep 12, 2023
  6

• Update Dockerfile

  enhancementpriority:low
  cancervariants/gene-normalization#246 · Filter by author jsstevenson opened on Sep 7, 2023
  2

• Run DB health check when DB is passed to QueryHandler

  enhancementpriority:low
  cancervariants/gene-normalization#241 · Filter by author jsstevenson opened on Aug 25, 2023
  1

• Rename it

  priority:high
  cancervariants/gene-normalization#237 · Filter by author jsstevenson opened on Aug 18, 2023
  5