Camille Juigné, Emmanuelle Becker, Océane Carpentier, Florence Gondret, Olivier Dameron
We developed a graph-based approach to identify complex connections in heterogeneous biological networks. We use data from different omics layers, which we link using : BioPAX, UniProt and ChEBI ontologies.
The SPARQL queries used are available in the jupyter notebook "2023_06_BioPAX_data-integration.ipyn".