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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,127 @@ | ||
| { | ||
| "name": "Starting example", | ||
| "storage": { | ||
| "engine": "hdf5", | ||
| "root": "network.hdf5" | ||
| }, | ||
| "network": { | ||
| "x": 200.0, | ||
| "y": 200.0, | ||
| "z": 200.0 | ||
| }, | ||
| "regions": { | ||
| "brain_region": { | ||
| "type": "stack", | ||
| "children": ["base_layer", "top_layer"] | ||
| } | ||
| }, | ||
| "partitions": { | ||
| "base_layer": { | ||
| "type": "layer", | ||
| "thickness": 100 | ||
| }, | ||
| "top_layer": { | ||
| "type": "layer", | ||
| "thickness": 100 | ||
| } | ||
| }, | ||
| "cell_types": { | ||
| "base_type": { | ||
| "spatial": { | ||
| "radius": 2.5, | ||
| "density": 3.9e-4 | ||
| } | ||
| }, | ||
| "top_type": { | ||
| "spatial": { | ||
| "radius": 7, | ||
| "count": 40 | ||
| } | ||
| } | ||
| }, | ||
| "placement": { | ||
| "example_placement": { | ||
| "strategy": "bsb.placement.RandomPlacement", | ||
| "cell_types": ["base_type"], | ||
| "partitions": ["base_layer"] | ||
| }, | ||
| "top_placement": { | ||
| "strategy": "bsb.placement.RandomPlacement", | ||
| "cell_types": ["top_type"], | ||
| "partitions": ["top_layer"] | ||
| } | ||
| }, | ||
| "connectivity": { | ||
| "A_to_B": { | ||
| "strategy": "bsb.connectivity.AllToAll", | ||
| "presynaptic": { | ||
| "cell_types": ["base_type"] | ||
| }, | ||
| "postsynaptic": { | ||
| "cell_types": ["top_type"] | ||
| } | ||
| } | ||
| }, | ||
| "simulations": { | ||
| "basal_activity": { | ||
| "simulator": "nest", | ||
| "resolution": 0.1, | ||
| "duration": 5000, | ||
| "cell_models": { | ||
| "base_type": { | ||
| "model": "iaf_cond_alpha" | ||
| }, | ||
| "top_type": { | ||
| "model": "iaf_cond_alpha", | ||
| "constants": { | ||
| "t_ref": 1.5, | ||
| "V_m": -62.0 | ||
| } | ||
| } | ||
| }, | ||
| "connection_models": { | ||
| "A_to_B": { | ||
| "synapse": { | ||
| "model": "static_synapse", | ||
| "weight": 300, | ||
| "delay": 1 | ||
| } | ||
| } | ||
| }, | ||
| "devices": { | ||
| "background_noise": { | ||
| "device": "poisson_generator", | ||
| "rate": 10, | ||
| "targetting": { | ||
| "strategy": "cell_model", | ||
| "cell_models": [ | ||
| "base_type" | ||
| ] | ||
| }, | ||
| "weight": 40, | ||
| "delay": 10 | ||
| }, | ||
| "base_layer_record": { | ||
| "device": "spike_recorder", | ||
| "delay": 0.1, | ||
| "targetting": { | ||
| "strategy": "cell_model", | ||
| "cell_models": [ | ||
| "base_type" | ||
| ] | ||
| } | ||
| }, | ||
| "top_layer_record": { | ||
| "device": "spike_recorder", | ||
| "delay": 0.1, | ||
| "targetting": { | ||
| "strategy": "cell_model", | ||
| "cell_models": [ | ||
| "top_type" | ||
| ] | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } | ||
| } |