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# 1 Introduction | ||
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{type: iframe, title:1 Introduction, width:800, height:600, poster:resources/chapt_screen_images/introduction.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/introduction.html) | ||
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manuscript/2-Scientific-software-development-best-practices.md
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# 2 Scientific software development best practices | ||
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{type: iframe, title:2 Scientific software development best practices, width:800, height:600, poster:resources/chapt_screen_images/scientific-software-development-best-practices.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/scientific-software-development-best-practices.html) | ||
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# 3 Why Automation | ||
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{type: iframe, title:3 Why Automation, width:800, height:600, poster:resources/chapt_screen_images/why-automation.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/why-automation.html) | ||
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# 4 GitHub Actions Fundamentals | ||
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{type: iframe, title:4 GitHub Actions Fundamentals, width:800, height:600, poster:resources/chapt_screen_images/github-actions-fundamentals.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/github-actions-fundamentals.html) | ||
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# 5 Automating Re-running Analyses | ||
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{type: iframe, title:5 Automating Re-running Analyses, width:800, height:600, poster:resources/chapt_screen_images/automating-re-running-analyses.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/automating-re-running-analyses.html) | ||
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# 6 GitHub Action Variables | ||
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{type: iframe, title:6 GitHub Action Variables, width:800, height:600, poster:resources/chapt_screen_images/github-action-variables.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/github-action-variables.html) | ||
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# 7 Troubleshooting GitHub Actions | ||
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{type: iframe, title:7 Troubleshooting GitHub Actions, width:800, height:600, poster:resources/chapt_screen_images/troubleshooting-github-actions.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/troubleshooting-github-actions.html) | ||
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# 8 Applying GitHub Actions Examples | ||
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{type: iframe, title:8 Applying GitHub Actions Examples, width:800, height:600, poster:resources/chapt_screen_images/applying-github-actions-examples.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/applying-github-actions-examples.html) | ||
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# 9 References | ||
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{type: iframe, title:9 References, width:800, height:600, poster:resources/chapt_screen_images/references.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/references.html) | ||
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# About the Authors | ||
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{type: iframe, title:About the Authors, width:800, height:600, poster:resources/chapt_screen_images/about-the-authors.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/about-the-authors.html) | ||
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# About this Course | ||
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{type: iframe, title:About this Course, width:800, height:600, poster:resources/chapt_screen_images/index.png} | ||
![](https://hutchdatascience.org/GitHub_Automation_for_Scientists/index.html) | ||
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1-Introduction.md | ||
2-Scientific-software-development-best-practices.md | ||
3-Why-Automation.md | ||
4-GitHub-Actions-Fundamentals.md | ||
5-Automating-Re-running-Analyses.md | ||
6-GitHub-Action-Variables.md | ||
7-Troubleshooting-GitHub-Actions.md | ||
8-Applying-GitHub-Actions-Examples.md | ||
9-References.md | ||
About-this-Course.md | ||
About-the-Authors.md |
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