try cmsearch v1.1.5 using cached CM file

galaxyproject · Jan 8, 2025 · de6b422 · de6b422
1 parent 98f808c
commit de6b422
Show file tree

Hide file tree

Showing 2 changed files with 155 additions and 193 deletions.
diff --git a/...mplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction-tests.yml b/...mplicon-pipeline-v5-rrna-prediction/mgnify-amplicon-pipeline-v5-rrna-prediction-tests.yml
@@ -13,9 +13,6 @@
     Clan information file:
       class: File
       location: "ftp://ftp.ebi.ac.uk/pub/databases/metagenomics/pipeline-5.0/ref-dbs/rfam_models/ribosomal_models/ribo.claninfo"
-    CM:
-      class: File
-      location: "ftp://ftp.ebi.ac.uk/pub/databases/metagenomics/pipeline-5.0/ref-dbs/rfam_models/ribosomal_models/ribo.cm"
   outputs:
     LSU_SSU_BED:
       element_tests: