Fix inconsistencies between CO2 simulation and carbon simulation with CO2 only

CHANGELOG.md

@@ -4,6 +4,17 @@ This file documents all notable changes to the GEOS-Chem repository starting in
 
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [Unreleased] - TBD
+### Changed
+- Renamed `Emiss_Carbon_Gases` to `CO2_Production` in `carbon_gases_mod.F90`
+- Updated start date and restart file for CO2 and tagCO simulations for consistency with carbon simulations
+
+### Fixed
+- Added a fix to skip the call to KPP when only CO2 is defined in the carbon simulation
+- Added fix to turn on ship emissions for CO2 in the carbon simulation
+- Updated `HEMCO_Config.rc` for carbon simulation to read data based on carbon species used
+- Fixed entries for CO2 emissions in `ExtData.rc.carbon`
+
 ## [Unreleased] - TBD
 ### Added
 - Added vectors `State_Chm%KPP_AbsTol` and `State_Chm%KPP_RelTol`

GeosCore/emissions_mod.F90

@@ -124,7 +124,7 @@ SUBROUTINE Emissions_Run( Input_Opt, State_Chm, State_Diag, State_Grid,    &
 ! !USES:
 !
     USE CARBON_MOD,            ONLY : EmissCarbon
-    USE Carbon_Gases_Mod,      ONLY : Emiss_Carbon_Gases
+    USE Carbon_Gases_Mod,      ONLY : CO2_Production
     USE CO2_MOD,               ONLY : EmissCO2
     USE ErrCode_Mod
     USE HCO_Interface_GC_Mod,  ONLY : HCOI_GC_Run
@@ -264,8 +264,8 @@ SUBROUTINE Emissions_Run( Input_Opt, State_Chm, State_Diag, State_Grid,    &
     !
     ! Computes CO2 production from CO oxidation
     IF ( Input_Opt%ITS_A_CARBON_SIM ) THEN
-       CALL Emiss_Carbon_Gases( Input_Opt,  State_Chm, State_Diag,            &
-                                State_Grid, State_Met, RC                    )
+       CALL CO2_Production( Input_Opt,  State_Chm, State_Diag,            &
+                            State_Grid, State_Met, RC                    )
 
        ! Trap potential errors
        IF ( RC /= GC_SUCCESS ) THEN

GeosCore/input_mod.F90

@@ -2015,7 +2015,7 @@ SUBROUTINE Config_CO( Config, Input_Opt, RC )
     ! Initialize
     RC      = GC_SUCCESS
     errMsg  = ''
-    thisLoc = ' -> at Config_CO2 (in module GeosCore/input_mod.F90)'
+    thisLoc = ' -> at Config_CO (in module GeosCore/input_mod.F90)'
 
     !------------------------------------------------------------------------
     ! Use P(CO) from CH4 (archived from a fullchem simulation)?
@@ -2046,7 +2046,7 @@ SUBROUTINE Config_CO( Config, Input_Opt, RC )
     !========================================================================
     ! Print to screen
     !========================================================================
-    IF ( Input_Opt%ITS_A_TAGCO_SIM .and. Input_Opt%amIRoot ) THEN
+    IF ( Input_Opt%amIRoot ) THEN
        WRITE(6,90 ) 'TAGGED CO SIMULATION SETTINGS'
        WRITE(6,95 ) '(overwrites any other settings related to CO)'
        WRITE(6,95 ) '---------------------------------------------'
@@ -2154,7 +2154,7 @@ SUBROUTINE Config_CO2( Config, Input_Opt, RC )
     !=================================================================
     ! Print to screen
     !=================================================================
-    IF ( Input_Opt%ITS_A_CO2_SIM .and. Input_Opt%amIRoot ) THEN
+    IF ( Input_Opt%amIRoot ) THEN
        WRITE( 6,90  ) 'CO2 SIMULATION SETTINGS'
        WRITE( 6,95  ) '(overwrites any other settings related to CO2)'
        WRITE( 6,95  ) '----------------------------------------------'

run/GCClassic/HEMCO_Config.rc.templates/HEMCO_Config.rc.CO2

@@ -30,6 +30,7 @@ ROOT:                        ${RUNDIR_DATA_ROOT}/HEMCO
 GCAPSCENARIO:                ${RUNDIR_GCAP2_SCENARIO}
 GCAPVERTRES:                 ${RUNDIR_GCAP2_VERTRES}
 Logfile:                     *
+DiagnFile:                   HEMCO_Diagn.rc
 DiagnPrefix:                 ./OutputDir/HEMCO_diagnostics
 DiagnFreq:                   Monthly
 Wildcard:                    *
@@ -652,7 +653,7 @@ ${RUNDIR_CO2_COPROD}
 # main/national fossil fuel emission field if using avaition emissions.
 #==============================================================================
 (((FOSSIL_CDIAC.or.FOSSIL_ODIAC.or.CO2CORR
-80 AVIATION_SURF_CORR $ROOT/CO2/v2015-04/FOSSIL/Aviation_SurfCorr_SclFac.1x1.nc CO2 2004/1/1/0 C xy 1 1
+80 AVIATION_SURF_CORR $ROOT/CO2/v2022-11/FOSSIL/Aviation_SurfCorr_SclFac.1x1.nc CO2 2004/1/1/0 C xy 1 1
 )))FOSSIL_CDIAC.or.FOSSIL_ODIAC.or.CO2CORR
 
 #==============================================================================

run/GCClassic/HEMCO_Config.rc.templates/HEMCO_Config.rc.carbon

@@ -114,6 +114,7 @@ Mask fractions:              false
     --> GMD_SFC_CH4            :       true     # 1979-2020
     --> CMIP6_SFC_CH4          :       false    # 1750-1978
 # ..... Ship emissions ...............
+    --> SHIP                   :       true
     --> CEDSv2_SHIP            :       true     # 1750-2017
     --> CEDS_GBDMAPS_SHIP      :       false    # 1970-2017
     --> CEDS_GBDMAPS_SHIP_byFuelType:  false    # 1970-2017
@@ -1261,6 +1262,9 @@ Mask fractions:              false
 #------------------------------------------------------------------------------
 # --- Global OH fields ---
 #------------------------------------------------------------------------------
+
+(((USE_CH4_DATA.or.USE_CO_DATA
+
 # --- OH from GEOS-Chem v5-07 [kg/m3], needed for CH4/IMI ---
 (((GLOBAL_OH_GCv5
 
@@ -1281,10 +1285,14 @@ ${RUNDIR_GLOBAL_OH}
 ))).not.GLOBAL_OH_GCv5
 )))GLOBAL_OH_GC14
 
+)))USE_CH4_DATA.or.USE_CO_DATA
+
 #------------------------------------------------------------------------------
 # --- Quantities needed for CH4 chemistry ---
 #------------------------------------------------------------------------------
 
+(((USE_CH4_DATA
+
 # --- Global CH4 loss frequencies [1/s] -----------
 (((CH4_LOSS_FREQ
 ${RUNDIR_CH4_LOSS}
@@ -1295,9 +1303,12 @@ ${RUNDIR_CH4_LOSS}
 ${RUNDIR_GLOBAL_Cl}
 )))GLOBAL_CL
 
+)))USE_CH4_DATA
+
 #------------------------------------------------------------------------------
 # --- Quantities needed for CO chemistry ---
 #------------------------------------------------------------------------------
+(((USE_CO_DATA
 
 # -- P(CO) from CH4 and NMVOC from the last 10-yr benchmark [molec/cm3/s] ---
 (((PROD_CO_CH4
@@ -1309,33 +1320,25 @@ ${RUNDIR_PCO_NMVOC}
 
 # --- GMI chemistry: prod/loss rates (for strato-/mesosphere) ---
 # --- Units: prod [v/v/s]; loss [1/s]                         ---
-(((USE_CO_DATA
 (((GMI_PROD_LOSS
 * GMI_LOSS_CO    $ROOT/GMI/v2022-11/gmi.clim.CO.geos5.2x25.nc  loss  2005/1-12/1/0 C xyz s-1     CO - 1 1
 * GMI_PROD_CO    $ROOT/GMI/v2022-11/gmi.clim.CO.geos5.2x25.nc  prod  2005/1-12/1/0 C xyz v/v/s   CO - 1 1
 )))GMI_PROD_LOSS
-)))USE_CO_DATA
 
-# If CO is not an advected species, then just read as a chemistry input
-(((.not.USE_CO_DATA
-(((GMI_PROD_LOSS
-* GMI_LOSS_CO    $ROOT/GMI/v2022-11/gmi.clim.CO.geos5.2x25.nc  loss  2005/1-12/1/0 C xyz s-1     *  - 1 1
-* GMI_PROD_CO    $ROOT/GMI/v2022-11/gmi.clim.CO.geos5.2x25.nc  prod  2005/1-12/1/0 C xyz v/v/s   *  - 1 1
-)))GMI_PROD_LOSS
-))).not.USE_CO_DATA
+)))USE_CO_DATA
 
 #------------------------------------------------------------------------------
 # --- Quantities needed for CO2 chemistry ---
 #------------------------------------------------------------------------------
+(((USE_CO2_DATA
 
 # --- CHEMICAL PRODUCTION FROM CO OXIDATION ------
 # --- Recommended for use in forward modelling ---
 # --- Optional for inversion/assimilation --------
-
-(((USE_CO2_DATA
 (((CO2_COPROD
 ${RUNDIR_CO2_COPROD}
 )))CO2_COPROD
+
 )))USE_CO2_DATA
 
 )))CHEMISTRY_INPUT

run/GCClassic/createRunDir.sh

@@ -927,6 +927,8 @@ cd ${rundir}
 # start year/month/day matches default initial restart file.
 if [[ "x${sim_name}" == "xHg"     ||
       "x${sim_name}" == "xCH4"    ||
+      "x${sim_name}" == "xCO2"    ||
+      "x${sim_name}" == "xtagCO"  ||
       "x${sim_name}" == "xcarbon" ||
       "x${sim_name}" == "xTransportTracers" ]]; then
     startdate='20190101'

run/GCHP/ExtData.rc.templates/ExtData.rc.carbon

@@ -260,7 +260,7 @@ CH4_SOILABSORB kg/m2/s  2009 Y F%y4-%m2-01T00:00:00 none none  CH4uptake  ./HcoD
 # --- AEIC 2019 aircraft (AEIC) ---
 AEIC19_MONMEAN_CO kg/m2/s Y Y F2019-%m2-01T00:00:00 none none CO ./HcoDir/AEIC2019/v2022-03/2019_monmean/AEIC_monmean_2019%m2.0.5x0.625.36L.nc
 #
-##AEIC19_DAILY_CO   kg/m2/s 2019 Y F%y4-%m2-%d2T00:00:00 none none CO ./HcoDir/AEIC2019/v2022-03/2019/%m2/AEIC_2019%m2%d2.0.5x0.625.36L.nc
+##AEIC19_DAILY_CO   kg/m2/s Y Y F%y4-%m2-%d2T00:00:00 none none CO ./HcoDir/AEIC2019/v2022-03/2019/%m2/AEIC_2019%m2%d2.0.5x0.625.36L.nc
 
 # --- CEDSv2 emissions ---
 CEDS_CO_AGR  kg/m2/s N Y F%y4-%m2-01T00:00:00 none none CO_agr  ./HcoDir/CEDS/v2021-06/%y4/CO-em-anthro_CMIP_CEDS_%y4.nc
@@ -281,10 +281,10 @@ CEDS_CO_SHP  kg/m2/s N Y F%y4-%m2-01T00:00:00 none none CO_shp  ./HcoDir/CEDS/v2
 FOSSILCO2_ODIAC  kg/m2/s N Y  F%y4-%m2-01T00:00:00 none none CO2 ./HcoDir/CO2/v2022-11/FOSSIL/ODIAC_CO2.monthly.generic.1x1.nc
 
 # --- CO2 Ocean Exchange ---
-OCEANCO2_TAKA_MONTHLY  kg/m2/s 2000 Y F%y4-%m2-01T00:00:00 none none CO2 ./HcoDir/CO2/v2022-11/OCEAN/Taka2009_CO2_Monthly.nc
+OCEANCO2_SCALED_MONTHLY kg/m2/s N  Y F%y4-%m2-01T00:00:00 none none CO2 ./HcoDir/CO2/v2022-11/OCEAN/Scaled_Ocean_CO2_monthly.nc
 
 # --- Balanced biosphere exchange ---
-SIB_BBIO_CO2 kg/m2/s N Y F%y4-%m2-%d2T%h2-01-01 none none CO2 ./HcoDir/CO2/v2022-11/BIO/SiB3_3hr_NEP.nc
+SIB_BBIO_CO2 kg/m2/s N Y F1985-%m2-%d2T%h2-01-01 none none CO2 ./HcoDir/CO2/v2022-11/BIO/SiB3_3hr_NEP.nc
 
 # --- Net Terrestrial Exchange ---
 CO2_NET_TERRESTRIAL kg/m2/s N Y - none none CO2 ./HcoDir/CO2/v2022-11/BIO/Net_terrestrial_exch_5.29Pg.generic.1x1.nc
@@ -293,20 +293,20 @@ CO2_NET_TERRESTRIAL kg/m2/s N Y - none none CO2 ./HcoDir/CO2/v2022-11/BIO/Net_te
 CEDS_CO2_SHP kg/m2/s N Y F%y4-%m2-01T00:00:00 none none CO2_shp ./HcoDir/CEDS/v2021-06/%y4/CO2-em-anthro_CMIP_CEDS_%y4.nc
 
 # --- CO2: AEIC 2019 aircraft emissions ---
-AEIC19_MONMEAN_CO2 kg/m2/s 2019 Y F%y4-%m2-%d2T00:00:00 none none FUELBURN ./HcoDir/AEIC2019/v2022-03/2019_monmean/AEIC_monmean_2019%m2.0.5x0.625.36L.nc
+AEIC19_MONMEAN_CO2 kg/m2/s Y Y F2019-%m2-01T00:00:00 none none FUELBURN ./HcoDir/AEIC2019/v2022-03/2019_monmean/AEIC_monmean_2019%m2.0.5x0.625.36L.nc
 
 # --- CO2: Surface correction for CO oxidation ---
-FOSSILCO2_MONTHLY kg/m/s N    Y F%y4-%m2-01T01:00:00 none none CO2     ./HcoDir/CO2/v2022-11/FOSSIL/ODIAC_CO2.monthly.generic.1x1.nc
-CO2_LIVESTOCK     kg/m/s 2004 Y F%y4-%m2-01T01:00:00 none none CH4_004 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
-CO2_WASTE         kg/m/s 2004 Y F%y4-%m2-01T01:00:00 none none CH4_005 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
-CO2_RICE          kg/m/s 2004 Y F%y4-%m2-01T01:00:00 none none CH4_007 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
-CO2_WETLANDS      kg/m/s 2004 Y F%y4-%m2-01T01:00:00 none none CH4_010 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
-CO2_NATURAL       kg/m/s 2004 Y F%y4-%m2-01T01:00:00 none none CH4_012 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
-CO2_ISOPRENE      kg/m/s 2004 Y F%y4-%m2-01T01:00:00 none none ISOP    ./HcoDir/CO2/v2022-11/CHEM/Isoprene-2004.geos.2x25.nc
-CO2_MONOTERP      kg/m/s 2004 Y F%y4-%m2-01T01:00:00 none none MONOT   ./HcoDir/CO2/v2022-11/CHEM/Monoterpene-2004.geos.2x25.nc
+FOSSILCO2_MONTHLY kg/m/s N Y F%y4-%m2-01T01:00:00 none none CO2     ./HcoDir/CO2/v2022-11/FOSSIL/ODIAC_CO2.monthly.generic.1x1.nc
+CO2_LIVESTOCK     kg/m/s Y Y F2004-%m2-01T01:00:00 none none CH4_004 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
+CO2_WASTE         kg/m/s Y Y F2004-%m2-01T01:00:00 none none CH4_005 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
+CO2_RICE          kg/m/s Y Y F2004-%m2-01T01:00:00 none none CH4_007 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
+CO2_WETLANDS      kg/m/s Y Y F2004-%m2-01T01:00:00 none none CH4_010 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
+CO2_NATURAL       kg/m/s Y Y F2004-%m2-01T01:00:00 none none CH4_012 ./HcoDir/CO2/v2022-11/CHEM/CH4_source.geos.2x25.nc
+CO2_ISOPRENE      kg/m/s Y Y F2004-%m2-01T01:00:00 none none ISOP    ./HcoDir/CO2/v2022-11/CHEM/Isoprene-2004.geos.2x25.nc
+CO2_MONOTERP      kg/m/s Y Y F2004-%m2-01T01:00:00 none none MONOT   ./HcoDir/CO2/v2022-11/CHEM/Monoterpene-2004.geos.2x25.nc
 
 # --- CO2 production from CO ---
-CO2_COPROD        kgC/m3/s N Y F%y2-%m2-01T00:00:00 none none LCO  ./HcoDir/CO2/v2024-01/CHEM/CO2_prod_rates.GEOS5.2x25.72L.nc
+CO2_COPROD        kgC/m3/s N Y F%y4-%m2-01T00:00:00 none none LCO  ./HcoDir/CO2/v2024-01/CHEM/CO2_prod_rates.GEOS5.2x25.72L.nc
 
 #==============================================================================
 # --- OCS emission fluxes ---
@@ -406,12 +406,11 @@ SHIP_LEVS     1 N Y - none none cmv_c3     ./HcoDir/VerticalScaleFactors/v2021-0
 #==============================================================================
 
 # --- National fossil fuel CO2 scale factors (Nassar et al, 2013) ---
-CO2_DIURNAL 1 N    Y F%y4-%m2-%d2T%h2:00:00 none none diurnal_scale_factors ./HcoDir/CO2/v2015-04/FOSSIL/TIMES_diurnal_scale_factors.nc
-CO2_WEEKLY  1 2006 Y F%y4-%m2-%d2T00:00:00  none none weekly_scale_factors  ./HcoDir/CO2/v2015-04/FOSSIL/TIMES_weekly_scale_factors.nc
+CO2_DIURNAL 1 N Y F2006-01-01T%h2:00:00 none none diurnal_scale_factors ./HcoDir/CO2/v2015-04/FOSSIL/TIMES_diurnal_scale_factors.nc
+CO2_WEEKLY  1 D Y F2006-01-01T00:00:00   none none weekly_scale_factors  ./HcoDir/CO2/v2015-04/FOSSIL/TIMES_weekly_scale_factors.nc
 
 # --- Domestic aviation surface correction factor ---
-AVIATION_SURF_CORR      1       2004 Y F%y2-01-01T00:00:00  none none CO2 ./HcoDir/CO2/v2022-11/FOSSIL/Aviation_SurfCorr_SclFac.1x1.nc
-OCEANCO2_SCALED_MONTHLY kg/m2/s N    Y F%y2-%m2-01T00:00:00 none none CO2 ./HcoDir/CO2/v2022-11/OCEAN/Scaled_Ocean_CO2_monthly.nc
+AVIATION_SURF_CORR      1       Y  Y F2004-01-01T00:00:00  none none CO2 ./HcoDir/CO2/v2022-11/FOSSIL/Aviation_SurfCorr_SclFac.1x1.nc
 
 ###############################################################################
 ###

run/GCHP/HEMCO_Config.rc.templates/HEMCO_Config.rc.carbon

@@ -114,6 +114,7 @@ Mask fractions:              false
     --> GMD_SFC_CH4            :       true     # 1979-2020
     --> CMIP6_SFC_CH4          :       false    # 1750-1978
 # ..... Ship emissions ...............
+    --> SHIP                   :       true
     --> CEDSv2_SHIP            :       true     # 1750-2017
     --> CEDS_GBDMAPS_SHIP      :       false    # 1970-2017
     --> CEDS_GBDMAPS_SHIP_byFuelType:  false    # 1970-2017
@@ -1261,6 +1262,9 @@ Mask fractions:              false
 #------------------------------------------------------------------------------
 # --- Global OH fields ---
 #------------------------------------------------------------------------------
+
+(((USE_CH4_DATA.or.USE_CO_DATA
+
 # --- OH from GEOS-Chem v5-07 [kg/m3], needed for CH4/IMI ---
 (((GLOBAL_OH_GCv5
 
@@ -1281,10 +1285,14 @@ ${RUNDIR_GLOBAL_OH}
 ))).not.GLOBAL_OH_GCv5
 )))GLOBAL_OH_GC14
 
+)))USE_CH4_DATA.or.USE_CO_DATA
+
 #------------------------------------------------------------------------------
 # --- Quantities needed for CH4 chemistry ---
 #------------------------------------------------------------------------------
 
+(((USE_CH4_DATA
+
 # --- Global CH4 loss frequencies [1/s] -----------
 (((CH4_LOSS_FREQ
 ${RUNDIR_CH4_LOSS}
@@ -1295,9 +1303,12 @@ ${RUNDIR_CH4_LOSS}
 ${RUNDIR_GLOBAL_Cl}
 )))GLOBAL_CL
 
+)))USE_CH4_DATA
+
 #------------------------------------------------------------------------------
 # --- Quantities needed for CO chemistry ---
 #------------------------------------------------------------------------------
+(((USE_CO_DATA
 
 # -- P(CO) from CH4 and NMVOC from the last 10-yr benchmark [molec/cm3/s] ---
 (((PROD_CO_CH4
@@ -1309,33 +1320,25 @@ ${RUNDIR_PCO_NMVOC}
 
 # --- GMI chemistry: prod/loss rates (for strato-/mesosphere) ---
 # --- Units: prod [v/v/s]; loss [1/s]                         ---
-(((USE_CO_DATA
 (((GMI_PROD_LOSS
 * GMI_LOSS_CO    $ROOT/GMI/v2022-11/gmi.clim.CO.geos5.2x25.nc  loss  2005/1-12/1/0 C xyz s-1     CO - 1 1
 * GMI_PROD_CO    $ROOT/GMI/v2022-11/gmi.clim.CO.geos5.2x25.nc  prod  2005/1-12/1/0 C xyz v/v/s   CO - 1 1
 )))GMI_PROD_LOSS
-)))USE_CO_DATA
 
-# If CO is not an advected species, then just read as a chemistry input
-(((.not.USE_CO_DATA
-(((GMI_PROD_LOSS
-* GMI_LOSS_CO    $ROOT/GMI/v2022-11/gmi.clim.CO.geos5.2x25.nc  loss  2005/1-12/1/0 C xyz s-1     *  - 1 1
-* GMI_PROD_CO    $ROOT/GMI/v2022-11/gmi.clim.CO.geos5.2x25.nc  prod  2005/1-12/1/0 C xyz v/v/s   *  - 1 1
-)))GMI_PROD_LOSS
-))).not.USE_CO_DATA
+)))USE_CO_DATA
 
 #------------------------------------------------------------------------------
 # --- Quantities needed for CO2 chemistry ---
 #------------------------------------------------------------------------------
+(((USE_CO2_DATA
 
 # --- CHEMICAL PRODUCTION FROM CO OXIDATION ------
 # --- Recommended for use in forward modelling ---
 # --- Optional for inversion/assimilation --------
-
-(((USE_CO2_DATA
 (((CO2_COPROD
 ${RUNDIR_CO2_COPROD}
 )))CO2_COPROD
+
 )))USE_CO2_DATA
 
 )))CHEMISTRY_INPUT

run/shared/download_data.yml

@@ -33,11 +33,11 @@ restarts:
     remote: v2023-01/GEOSChem.Restart.carbon.20190101_0000z.nc4
     local:  GEOSChem.Restart.20190101_0000z.nc4
   ch4:
-    remote: v2020-02/GEOSChem.Restart.CH4.20190101_0000z.nc4
+    remote: v2023-01/GEOSChem.Restart.carbon.20190101_0000z.nc4
     local:  GEOSChem.Restart.20190101_0000z.nc4
   co2:
-    remote: v2020-02/GEOSChem.Restart.CO2.20190701_0000z.nc4
-    local:  GEOSChem.Restart.20190701_0000z.nc4
+    remote: v2023-01/GEOSChem.Restart.carbon.20190101_0000z.nc4
+    local:  GEOSChem.Restart.20190101_0000z.nc4
   fullchem:
     remote: GC_14.3.0/GEOSChem.Restart.fullchem.20190701_0000z.nc4
     local:  GEOSChem.Restart.20190701_0000z.nc4
@@ -51,8 +51,8 @@ restarts:
     remote: v2020-02/GEOSChem.Restart.POPs_BaP.20190701_0000z.nc4
     local:  GEOSChem.Restart.20190701_0000z.nc4
   tagco:
-    remote: v2020-02/GEOSChem.Restart.tagCO.20190701_0000z.nc4
-    local:  GEOSChem.Restart.20190701_0000z.nc4 
+    remote: v2023-01/GEOSChem.Restart.carbon.20190101_0000z.nc4
+    local:  GEOSChem.Restart.20190101_0000z.nc4 
   tago3:
     remote: GC_14.3.0/GEOSChem.Restart.fullchem.20190701_0000z.nc4
     local:  GEOSChem.Restart.20190701_0000z.nc4

run/shared/singleCarbonSpecies.sh

@@ -314,17 +314,17 @@ function updateExtData() {
         sed -i "/AEIC19_DAILY_CO /d"    "${file}"  # trailing space required
         sed -i "/AEIC19_MONMEAN_CO /d"  "${file}"  # trailing space required
         sed -i "/APEI_CO/d"             "${file}"
-        sed -i "/^CEDS_CO/d"            "${file}"
-        sed -i "/CMIP6_CO/d"            "${file}"
+        sed -i "/^CEDS_CO_/d"           "${file}"
+        sed -i "/CMIP6_CO_/d"           "${file}"
         sed -i "/\#DICE_/d"             "${file}"
-        sed -i "/EDGAR_CO/d"            "${file}"
+        sed -i "/EDGAR_CO_/d"           "${file}"
         sed -i "/EPA16_CO_/d"           "${file}"
         sed -i "/HTAP_CO_/d"            "${file}"
-        sed -i "/RCP3PD_CO/d"           "${file}"
-        sed -i "/RCP45_CO/d"            "${file}"
-        sed -i "/RCP60_CO/d"            "${file}"
-        sed -i "/RCP85_CO/d"            "${file}"
-        sed -i "/NEI99_DOW_CO/d"        "${file}"
+        sed -i "/RCP3PD_CO /d"          "${file}"
+        sed -i "/RCP45_CO /d"           "${file}"
+        sed -i "/RCP60_CO /d"           "${file}"
+        sed -i "/RCP85_CO /d"           "${file}"
+        sed -i "/NEI99_DOW_CO /d"       "${file}"
 	sed -i "/LIQFUEL_/d"            "${file}"
     fi