Fixed Python version and config issues due to vitessce updates

hubmapconsortium · Dec 3, 2024 · ae9ffaa · ae9ffaa
1 parent 0678321
commit ae9ffaa
Show file tree

Hide file tree

Showing 3 changed files with 142 additions and 142 deletions.
diff --git a/.github/workflows/portal-ci.yml b/.github/workflows/portal-ci.yml
@@ -14,10 +14,10 @@ jobs:
       with:
         submodules: 'recursive'
 
-    - name: Set up Python 3.9
+    - name: Set up Python 3.10
       uses: actions/setup-python@v2
       with:
-        python-version: '3.9'
+        python-version: '3.10'
         architecture: 'x64'
 
     - name: Install python main dependencies

diff --git a/test/good-fixtures/MultiomicAnndataZarrViewConfBuilder/fake-multiome-conf.json b/test/good-fixtures/MultiomicAnndataZarrViewConfBuilder/fake-multiome-conf.json
@@ -179,13 +179,13 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
+        "h": 6,
         "props": {
           "embeddingCellSetLabelsVisible": false
         },
-        "w": 3.0,
-        "x": 0.0,
-        "y": 0.0
+        "w": 3,
+        "x": 0,
+        "y": 0
       },
       {
         "component": "scatterplot",
@@ -200,13 +200,13 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
+        "h": 6,
         "props": {
           "embeddingCellSetLabelsVisible": false
         },
-        "w": 3.0,
-        "x": 3.0,
-        "y": 0.0
+        "w": 3,
+        "x": 3,
+        "y": 0
       },
       {
         "component": "scatterplot",
@@ -219,13 +219,13 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
+        "h": 6,
         "props": {
           "embeddingCellSetLabelsVisible": false
         },
-        "w": 3.0,
-        "x": 6.0,
-        "y": 0.0
+        "w": 3,
+        "x": 6,
+        "y": 0
       },
       {
         "component": "featureList",
@@ -238,10 +238,10 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
-        "w": 3.0,
-        "x": 9.0,
-        "y": 6.0
+        "h": 6,
+        "w": 3,
+        "x": 9,
+        "y": 6
       },
       {
         "component": "featureList",
@@ -254,10 +254,10 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
-        "w": 3.0,
-        "x": 6.0,
-        "y": 6.0
+        "h": 6,
+        "w": 3,
+        "x": 6,
+        "y": 6
       },
       {
         "component": "genomicProfiles",
@@ -266,13 +266,13 @@
           "obsColorEncoding": "B",
           "obsSetSelection": "B"
         },
-        "h": 6.0,
+        "h": 6,
         "props": {
           "title": "Leiden (Weighted Nearest Neighbor) Genomic Profiles"
         },
-        "w": 6.0,
-        "x": 0.0,
-        "y": 6.0
+        "w": 6,
+        "x": 0,
+        "y": 6
       },
       {
         "component": "obsSets",
@@ -283,10 +283,10 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
-        "w": 3.0,
-        "x": 9.0,
-        "y": 0.0
+        "h": 6,
+        "w": 3,
+        "x": 9,
+        "y": 0
       }
     ],
     "name": "Leiden (Weighted Nearest Neighbor)",
@@ -472,13 +472,13 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
+        "h": 6,
         "props": {
           "embeddingCellSetLabelsVisible": false
         },
-        "w": 3.0,
-        "x": 0.0,
-        "y": 0.0
+        "w": 3,
+        "x": 0,
+        "y": 0
       },
       {
         "component": "scatterplot",
@@ -493,13 +493,13 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
+        "h": 6,
         "props": {
           "embeddingCellSetLabelsVisible": false
         },
-        "w": 3.0,
-        "x": 3.0,
-        "y": 0.0
+        "w": 3,
+        "x": 3,
+        "y": 0
       },
       {
         "component": "scatterplot",
@@ -512,13 +512,13 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
+        "h": 6,
         "props": {
           "embeddingCellSetLabelsVisible": false
         },
-        "w": 3.0,
-        "x": 6.0,
-        "y": 0.0
+        "w": 3,
+        "x": 6,
+        "y": 0
       },
       {
         "component": "featureList",
@@ -531,10 +531,10 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
-        "w": 3.0,
-        "x": 9.0,
-        "y": 6.0
+        "h": 6,
+        "w": 3,
+        "x": 9,
+        "y": 6
       },
       {
         "component": "featureList",
@@ -547,10 +547,10 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
-        "w": 3.0,
-        "x": 6.0,
-        "y": 6.0
+        "h": 6,
+        "w": 3,
+        "x": 6,
+        "y": 6
       },
       {
         "component": "genomicProfiles",
@@ -559,13 +559,13 @@
           "obsColorEncoding": "B",
           "obsSetSelection": "B"
         },
-        "h": 6.0,
+        "h": 6,
         "props": {
           "title": "Leiden (RNA) Genomic Profiles"
         },
-        "w": 6.0,
-        "x": 0.0,
-        "y": 6.0
+        "w": 6,
+        "x": 0,
+        "y": 6
       },
       {
         "component": "obsSets",
@@ -576,10 +576,10 @@
           "obsColorEncoding": "A",
           "obsSetSelection": "A"
         },
-        "h": 6.0,
-        "w": 3.0,
-        "x": 9.0,
-        "y": 0.0
+        "h": 6,
+        "w": 3,
+        "x": 9,
+        "y": 0
       }
     ],
     "name": "Leiden (RNA)",