Skip to content

Commit

Permalink
Update FAQ.md
Browse files Browse the repository at this point in the history
  • Loading branch information
jonas-fuchs authored Jan 23, 2024
1 parent c400fa9 commit aa8e61e
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion docs/FAQ.md
Original file line number Diff line number Diff line change
Expand Up @@ -46,6 +46,6 @@ Yes, please. Give feedback to code or settings or also if you have successfully

11. **Do I have to adapt the bed file if I want to trim primer sequences in my NGS analysis pipeline?"**

You can try to use varVAMP's consensus sequence for mapping. However, if you want to map to a different reference, you will need to adapt the primer's start and stop positions in the bed file to your new reference sequence. You can try to use the [varVAMP helper script developed by Namuun](https://github.com/rki-mf1/update-varvamp-bed/).
You can try to use varVAMP's consensus sequence for mapping. However, if you want to map to a different reference, you will need to adapt the primer's start and stop positions in the bed file to your new reference sequence. You can do this for example with the [varVAMP helper script developed by Namuun](https://github.com/rki-mf1/update-varvamp-bed/).

#### [Previous: How it works](./how_varvamp_works.md)

0 comments on commit aa8e61e

Please sign in to comment.