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Releases: josephhughes/ViCTree

ViCTree version 1.2 is now released

08 Jan 14:31
@josephhughes josephhughes
v1.2
ce34a35
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ViCTree version 1.2 is now released Latest
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The key addition in the release is the incorporation of the mPTP automatic species delimitation into the pipeline.

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ViCTree version 1.1 is now released

27 Jul 13:21
@josephhughes josephhughes
v1.1
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ViCTree version 1.1 is now released

The key changes in this release are:

  1. Bioperl dependency removed
  2. binary files and licences in deps folder
  3. validation scripts added
  4. colouring of the nodes in ViCTreeView (clusters displayed in distinct colours)
  5. re-root functionality added to ViCTreeView
  6. addition of links to protein cluster sequences in ViCTreeView
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We are happy to announce ViCTree version 1.0.

10 Oct 09:19
@josephhughes josephhughes
v1.0
6a3dccd
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We are happy to announce ViCTree version 1.0.

NEWS:

- Taxonomic classification of viruses using a protein - Subfamily _Densovirinae_ and subfamily _Parvovirinae_ phylogenies are available - RAxML multithread supported - Integration of NCBI's new header format - GIs are replaced by NCBI protein and genome accession numbers - Switch between genus name, species name and complete lineage labels in ViCTreeView - Link-out to NCBI nuccore pages in ViCTreeView

Documentation:

For ViCTree user guide please see:

http://bioinformatics.cvr.ac.uk/victree_web/

For ViCTreeView live demo please see:

http://bioinformatics.cvr.ac.uk/victree/

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